Miyakogusa Predicted Gene

Lj3g3v1530160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1530160.1 Non Chatacterized Hit- tr|I3S4C1|I3S4C1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,100,0,no
description,NULL; SUI1,Translation initiation factor SUI1; SUI1_MOF2:
translation initiation fact,CUFF.42779.1
         (114 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G27130.1 | Symbols:  | Translation initiation factor SUI1 fam...   212   4e-56
AT5G54760.3 | Symbols:  | Translation initiation factor SUI1 fam...   210   1e-55
AT5G54760.2 | Symbols:  | Translation initiation factor SUI1 fam...   210   1e-55
AT5G54760.1 | Symbols:  | Translation initiation factor SUI1 fam...   210   1e-55
AT1G54290.1 | Symbols:  | Translation initiation factor SUI1 fam...   208   5e-55
AT5G54940.2 | Symbols:  | Translation initiation factor SUI1 fam...   176   3e-45
AT5G54940.1 | Symbols:  | Translation initiation factor SUI1 fam...   176   3e-45

>AT4G27130.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr4:13604814-13605525 REVERSE LENGTH=113
          Length = 113

 Score =  212 bits (540), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 101/114 (88%), Positives = 110/114 (96%), Gaps = 1/114 (0%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           MSELD+ +PTAFDPFA+ANAEDSGAG+ KEYVHIR+QQRNGRKSLTTVQGLKKE+SY KI
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGT-KEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKI 59

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IKIHGF
Sbjct: 60  LKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54760.3 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22244732-22245517 FORWARD LENGTH=113
          Length = 113

 Score =  210 bits (535), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/114 (87%), Positives = 109/114 (95%), Gaps = 1/114 (0%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           MSELD+ +PTAFDPFA+AN EDSGAG+ KEYVHIR+QQRNGRKSLTTVQGLKKE+SY KI
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGT-KEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKI 59

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IKIHGF
Sbjct: 60  LKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54760.2 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22244732-22245517 FORWARD LENGTH=113
          Length = 113

 Score =  210 bits (535), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/114 (87%), Positives = 109/114 (95%), Gaps = 1/114 (0%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           MSELD+ +PTAFDPFA+AN EDSGAG+ KEYVHIR+QQRNGRKSLTTVQGLKKE+SY KI
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGT-KEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKI 59

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IKIHGF
Sbjct: 60  LKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54760.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22244732-22245517 FORWARD LENGTH=113
          Length = 113

 Score =  210 bits (535), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 100/114 (87%), Positives = 109/114 (95%), Gaps = 1/114 (0%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           MSELD+ +PTAFDPFA+AN EDSGAG+ KEYVHIR+QQRNGRKSLTTVQGLKKE+SY KI
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGT-KEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKI 59

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IKIHGF
Sbjct: 60  LKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT1G54290.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr1:20268710-20269390 REVERSE LENGTH=113
          Length = 113

 Score =  208 bits (530), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 99/114 (86%), Positives = 110/114 (96%), Gaps = 1/114 (0%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           MS+L+  +PTAFDPFA+ANAEDSGAG+ KEYVHIR+QQRNGRKSLTTVQGLKKE+SY+KI
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGT-KEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKI 59

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKK++IKIHGF
Sbjct: 60  LKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54940.2 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22308420-22308758 REVERSE LENGTH=112
          Length = 112

 Score =  176 bits (446), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/114 (74%), Positives = 97/114 (85%), Gaps = 2/114 (1%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           M ELD  IP+A+DPFAEA  +DS A  +KE +HIRIQQRNG+KSLTTVQGLKKE+SY +I
Sbjct: 1   MVELDIQIPSAYDPFAEA--KDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERI 58

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKK+FCCNG VVQD ELG++IQLQGDQRK VS FLVQ GI KK+ IKIHGF
Sbjct: 59  LKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112


>AT5G54940.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22308420-22308758 REVERSE LENGTH=112
          Length = 112

 Score =  176 bits (446), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/114 (74%), Positives = 97/114 (85%), Gaps = 2/114 (1%)

Query: 1   MSELDAAIPTAFDPFAEANAEDSGAGSSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKI 60
           M ELD  IP+A+DPFAEA  +DS A  +KE +HIRIQQRNG+KSLTTVQGLKKE+SY +I
Sbjct: 1   MVELDIQIPSAYDPFAEA--KDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERI 58

Query: 61  LKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 114
           LKDLKK+FCCNG VVQD ELG++IQLQGDQRK VS FLVQ GI KK+ IKIHGF
Sbjct: 59  LKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112