Miyakogusa Predicted Gene

Lj3g3v1476940.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1476940.1 Non Chatacterized Hit- tr|B9T439|B9T439_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,29.49,2e-17,seg,NULL,CUFF.42675.1
         (300 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    72   5e-13
AT3G53560.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    70   2e-12
AT5G02590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    64   2e-10
AT1G01990.1 | Symbols:  | unknown protein; Has 32 Blast hits to ...    58   6e-09
AT3G09490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...    53   2e-07

>AT2G37400.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr2:15696365-15697366 REVERSE
           LENGTH=333
          Length = 333

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 80/150 (53%), Gaps = 11/150 (7%)

Query: 159 FLGSKPDHGHSVLLL--------KLKERVPVVHSFDKMKSDDEEAWQVLKAQVFSCSEKL 210
           +L S PD   ++  L        KL E + ++    +++ +++E W +LKA +FS S  L
Sbjct: 122 YLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKE-WPMLKANIFSYSGDL 180

Query: 211 ELVKVGFEEILENDQDCHRAHHDCIFEYLEMVDKCTNLLKGIKVAISRCERQNADIRSYL 270
           E  K GFEEIL  D     A+H  +  Y +  D    + K I+ A+ RC+++    R  L
Sbjct: 181 ESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKEKN--RKDL 238

Query: 271 RFFSKVLARIRVFERDMVGALKYYKELVQE 300
           R F  ++A+IRV E     ALK Y+ELV+E
Sbjct: 239 RDFKLLVAQIRVIEGKHNEALKLYEELVKE 268


>AT3G53560.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:19859954-19860976 REVERSE
           LENGTH=340
          Length = 340

 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/127 (36%), Positives = 72/127 (56%), Gaps = 3/127 (2%)

Query: 174 KLKERVPVVHSFDKMKSDDEEAWQVLKAQVFSCSEKLELVKVGFEEILENDQDCHRAHHD 233
           KL E V V+    K++ +++E W VLKA +F+ S  L+L K GFEEIL  D     A+H 
Sbjct: 145 KLTEAVEVIDRLIKLEPEEKE-WPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHG 203

Query: 234 CIFEYLEMVDKCTNLLKGIKVAISRCERQNADIRSYLRFFSKVLARIRVFERDMVGALKY 293
            +  Y +       +   I+ A+ +C+++N   ++  R F  ++A+IRV E     ALK 
Sbjct: 204 LLMAYSDAGLDLKEVESRIEEAMLKCKKENN--QNDFRDFKLLVAQIRVIEGKHSEALKL 261

Query: 294 YKELVQE 300
           Y+ELV+E
Sbjct: 262 YQELVKE 268


>AT5G02590.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr5:583117-584097 FORWARD
           LENGTH=326
          Length = 326

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 3/109 (2%)

Query: 192 DEEAWQVLKAQVFSCSEKLELVKVGFEEILENDQDCHRAHHDCIFEYLEMVDKCTNLLKG 251
           +E+ W++LKAQV +     +    GFEE+L  D     A+H  +  Y E   K + +   
Sbjct: 161 EEQEWRILKAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESR 220

Query: 252 IKVAISRCERQNADIRSYLRFFSKVLARIRVFERDMVGALKYYKELVQE 300
           I  AI +C+++N   +   R F  ++A+IRV + + + AL+ Y+ELV++
Sbjct: 221 INEAIEKCKKEN---KKDFRDFMLLIAQIRVIKGNPIEALRVYQELVKD 266


>AT1G01990.1 | Symbols:  | unknown protein; Has 32 Blast hits to 32
           proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa
           - 0; Fungi - 0; Plants - 32; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:343462-344199 REVERSE LENGTH=245
          Length = 245

 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 91/185 (49%), Gaps = 22/185 (11%)

Query: 108 LPSFATITAASAFLILGFCQKGFTSKALPSSLSSVVSIQEELLDEKTDIGDFLGSKPDHG 167
           +P+ A   AASA+      Q        P  ++S V +  +L +E       L SKP + 
Sbjct: 67  IPTIAV--AASAWFFFRLHQ-------YPPIITSPVDLHLDLEEEGAIKELPLESKPGYV 117

Query: 168 HSVLLLKLKERVPVVHSFDKMKSDDEEAWQVLKAQVFSCSEKLELVKVGFEEILENDQDC 227
            ++   K+K    V+   D   SD   ++  LKA++   +E LE  +   EE++E D   
Sbjct: 118 KALHFYKIKPGT-VLKLLDVFDSD---SYDSLKARIRLSAEWLETARRELEEVVERDPGR 173

Query: 228 HRAHHDCIFEYLEMVDKCTNLLKGIKVAISRCERQNADIRSYLRFFSKVLARIRVFERDM 287
                  + EY ++VD+   +L+ ++V I +C++ N  ++ YLR  +++LAR+R  E  +
Sbjct: 174 -------VMEYSQVVDELMEILRDMEVYIDKCQKDN--VKGYLRSCNRLLARVRRMEAQI 224

Query: 288 VGALK 292
           +  LK
Sbjct: 225 LNVLK 229


>AT3G09490.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr3:2915636-2916640 FORWARD
           LENGTH=334
          Length = 334

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 54/110 (49%), Gaps = 6/110 (5%)

Query: 193 EEAWQVLKAQVFSCSEKLELVKVGFEEILENDQDCHRAHHDCIFEYLEMVDKCTNLLKGI 252
           E  W  +KA++ S   K E     FEEILE D     A+H  + EY     K T + K I
Sbjct: 146 ERKWPAMKARILSYHGKSESAIEAFEEILEKDPIRVDAYHYLVMEYYNSKPKLTEIEKRI 205

Query: 253 KVAISRC--ERQNADIRSYLRFFSKVLARIRVFERDMVGALKYYKELVQE 300
              I RC  E++  +I      F  ++A+IR  E   V A++  +ELV+E
Sbjct: 206 NKVIRRCKKEKKTKEILG----FRMLIAQIRFIEGKSVEAIRICEELVKE 251