Miyakogusa Predicted Gene

Lj3g3v1476900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1476900.1 Non Chatacterized Hit- tr|I1QVY3|I1QVY3_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,64.52,4e-19,
,CUFF.42669.1
         (62 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17430.1 | Symbols:  | O-fucosyltransferase family protein | ...   119   5e-28

>AT4G17430.1 | Symbols:  | O-fucosyltransferase family protein |
           chr4:9725201-9726801 REVERSE LENGTH=507
          Length = 507

 Score =  119 bits (297), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 50/62 (80%), Positives = 57/62 (91%)

Query: 1   MWYAPHSEFSNQLSEFKNAVLLAGILNSTLVVPPILDHHAVALGSCPKVQVVDPKEIRIS 60
           +WYAPHS FSNQLSEFKNA+L+AGILN TL++PPILDHHAVALGSCPK +V+ P EIRIS
Sbjct: 84  LWYAPHSGFSNQLSEFKNALLMAGILNRTLIIPPILDHHAVALGSCPKFRVLSPSEIRIS 143

Query: 61  VW 62
           VW
Sbjct: 144 VW 145