Miyakogusa Predicted Gene

Lj3g3v1475860.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1475860.1 Non Chatacterized Hit- tr|I1J7S5|I1J7S5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,89.59,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; YABBY,YABBY
protein,CUFF.42665.1
         (221 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G45190.1 | Symbols: AFO, FIL, YAB1 | Plant-specific transcrip...   253   9e-68
AT4G00180.1 | Symbols: YAB3 | Plant-specific transcription facto...   228   2e-60
AT4G00180.2 | Symbols: YAB3 | Plant-specific transcription facto...   204   4e-53
AT2G26580.2 | Symbols: YAB5 | plant-specific transcription facto...   161   2e-40
AT2G26580.1 | Symbols: YAB5 | plant-specific transcription facto...   161   2e-40
AT1G08465.1 | Symbols: YAB2 | Plant-specific transcription facto...   154   4e-38
AT1G23420.1 | Symbols: INO | Plant-specific transcription factor...   122   1e-28
AT1G69180.1 | Symbols: CRC | Plant-specific transcription factor...   107   7e-24

>AT2G45190.1 | Symbols: AFO, FIL, YAB1 | Plant-specific
           transcription factor YABBY family protein |
           chr2:18628450-18630552 REVERSE LENGTH=229
          Length = 229

 Score =  253 bits (645), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 134/204 (65%), Positives = 155/204 (75%), Gaps = 9/204 (4%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHL---AHSF 83
           CYV CNFC T+LAV+VP TSLFKTVTVRCG C+NLLSVNMR  +LPA+NQL L    HS+
Sbjct: 26  CYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQLGPHSY 85

Query: 84  FTPQNILEEIRNGPSTNMMMN--QLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVP 141
           F PQ+ILEE+R+ PS   MM   Q P  ND+          EI          EKRQRVP
Sbjct: 86  FNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPPEKRQRVP 145

Query: 142 SAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPVKKAN-ARQD 200
           SAYNRFIK+EIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL+PD+QPVKK N  +Q+
Sbjct: 146 SAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLVPDNQPVKKTNMPQQE 205

Query: 201 AED-VLLKDGFFAP--ANVGVSPY 221
            ED +++K+GF+AP  ANVGV+PY
Sbjct: 206 GEDNMVMKEGFYAPAAANVGVTPY 229


>AT4G00180.1 | Symbols: YAB3 | Plant-specific transcription factor
           YABBY family protein | chr4:72804-75089 REVERSE
           LENGTH=240
          Length = 240

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/216 (61%), Positives = 156/216 (72%), Gaps = 26/216 (12%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSV--NMRGPLLPAANQLHLAHSFF 84
           CYVHC+FCDTVLAVSVP +SLFKTVTVRCGHCSNLLSV  +MR  LLP+ + L   HSF 
Sbjct: 26  CYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNL--GHSFL 83

Query: 85  TPQ------NILEEIRNGP---STNMMMNQL-----PNQNDLVMSTMRGGH----EEIXX 126
            P       N+LEE+R+G    + NMMM+       PN++ LVM+T  G      +E+  
Sbjct: 84  PPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEH-LVMATRNGRSVDHLQEMPR 142

Query: 127 XXXXXXXXEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 186
                   EKRQRVPSAYNRFIK+EIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM
Sbjct: 143 PPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 202

Query: 187 PDHQPVKKANAR-QDAEDVLL-KDGFF-APANVGVS 219
            DH P KKAN R Q+ ED ++ ++GF+ + ANVGV+
Sbjct: 203 ADHPPTKKANVRQQEGEDGMMGREGFYGSAANVGVA 238


>AT4G00180.2 | Symbols: YAB3 | Plant-specific transcription factor
           YABBY family protein | chr4:72804-74888 REVERSE
           LENGTH=209
          Length = 209

 Score =  204 bits (519), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/210 (58%), Positives = 145/210 (69%), Gaps = 26/210 (12%)

Query: 33  FCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSV--NMRGPLLPAANQLHLAHSFFTPQ--- 87
            CD    VSVP +SLFKTVTVRCGHCSNLLSV  +MR  LLP+ + L   HSF  P    
Sbjct: 1   MCDINWQVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNL--GHSFLPPPPPP 58

Query: 88  ---NILEEIRNGP---STNMMMNQL-----PNQNDLVMSTMRGGH----EEIXXXXXXXX 132
              N+LEE+R+G    + NMMM+       PN++ LVM+T  G      +E+        
Sbjct: 59  PPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEH-LVMATRNGRSVDHLQEMPRPPPANR 117

Query: 133 XXEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPDHQPV 192
             EKRQRVPSAYNRFIK+EIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM DH P 
Sbjct: 118 PPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMADHPPT 177

Query: 193 KKANAR-QDAEDVLL-KDGFF-APANVGVS 219
           KKAN R Q+ ED ++ ++GF+ + ANVGV+
Sbjct: 178 KKANVRQQEGEDGMMGREGFYGSAANVGVA 207


>AT2G26580.2 | Symbols: YAB5 | plant-specific transcription factor
           YABBY family protein | chr2:11303923-11306739 REVERSE
           LENGTH=164
          Length = 164

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 101/160 (63%), Gaps = 17/160 (10%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CY+ CNFC+ +LAV+VPC+SLF  VTVRCGHC+NL SVNM   L   +     A ++  P
Sbjct: 12  CYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNYAVP 71

Query: 87  QNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVPSAYNR 146
           +          S++    ++P+         R     I          EKRQRVPSAYN+
Sbjct: 72  E--------YGSSSRSHTKIPS---------RISTRTITEQRIVNRPPEKRQRVPSAYNQ 114

Query: 147 FIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 186
           FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 115 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154


>AT2G26580.1 | Symbols: YAB5 | plant-specific transcription factor
           YABBY family protein | chr2:11303923-11306739 REVERSE
           LENGTH=164
          Length = 164

 Score =  161 bits (408), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 84/160 (52%), Positives = 101/160 (63%), Gaps = 17/160 (10%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTP 86
           CY+ CNFC+ +LAV+VPC+SLF  VTVRCGHC+NL SVNM   L   +     A ++  P
Sbjct: 12  CYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQATNYAVP 71

Query: 87  QNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVPSAYNR 146
           +          S++    ++P+         R     I          EKRQRVPSAYN+
Sbjct: 72  E--------YGSSSRSHTKIPS---------RISTRTITEQRIVNRPPEKRQRVPSAYNQ 114

Query: 147 FIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLM 186
           FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHFGLM
Sbjct: 115 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLM 154


>AT1G08465.1 | Symbols: YAB2 | Plant-specific transcription factor
           YABBY family protein | chr1:2676033-2679382 FORWARD
           LENGTH=184
          Length = 184

 Score =  154 bits (389), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/169 (52%), Positives = 101/169 (59%), Gaps = 23/169 (13%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNM-------RGPLLPAANQLHL 79
           CYVHC+FC T+LAVSVP  SLF  VTVRCGHC+NLLS+N+         P +    Q H 
Sbjct: 11  CYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHR 70

Query: 80  AHSFFTPQNILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQR 139
            H+       L   ++  S++   N L    D     M                 EKRQR
Sbjct: 71  QHT-----TSLVTRKDCASSSRSTNNLSENIDREAPRM-----------PPIRPPEKRQR 114

Query: 140 VPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGLMPD 188
           VPSAYNRFIK+EIQRIKA NP+ISHREAFS AAKNWAHFPHIHFGL  D
Sbjct: 115 VPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLD 163


>AT1G23420.1 | Symbols: INO | Plant-specific transcription factor
           YABBY family protein | chr1:8317423-8319104 FORWARD
           LENGTH=231
          Length = 231

 Score =  122 bits (307), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/159 (45%), Positives = 93/159 (58%), Gaps = 3/159 (1%)

Query: 27  CYVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVN-MRGPLLPAANQLHLAHSFFT 85
           C+V C FC T+L VSVP TSL   VTVRCGHC++LLSVN M+   +P      L+H   T
Sbjct: 22  CHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSHLDET 81

Query: 86  PQNILEEIRNGPSTNMMMNQ-LPNQNDLVMSTMRGGHEEIXXXXXXXXXX-EKRQRVPSA 143
            +  +            +NQ   N    ++S+     E++           EKRQR PSA
Sbjct: 82  GKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSA 141

Query: 144 YNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIH 182
           YN FIK+EI+R+KA NP ++H+EAFS AAKNWAHFP  H
Sbjct: 142 YNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180


>AT1G69180.1 | Symbols: CRC | Plant-specific transcription factor
           YABBY family protein | chr1:26007734-26008940 REVERSE
           LENGTH=181
          Length = 181

 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 83/151 (54%), Gaps = 17/151 (11%)

Query: 28  YVHCNFCDTVLAVSVPCTSLFKTVTVRCGHCSNLLSVNMRGPLLPAANQLHLAHSFFTPQ 87
           YV C+ C+T+LAV +P   +  TVTV+CGHC NL  +    PL     Q H++ +     
Sbjct: 23  YVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTTTPPL-----QGHVSLTLQMQS 77

Query: 88  NILEEIRNGPSTNMMMNQLPNQNDLVMSTMRGGHEEIXXXXXXXXXXEKRQRVPSAYNRF 147
               + + G S++   +   +Q                         EK+QR+PSAYNRF
Sbjct: 78  FGGSDYKKGSSSSSSSSTSSDQPPSPSPPF------------VVKPPEKKQRLPSAYNRF 125

Query: 148 IKDEIQRIKAGNPDISHREAFSAAAKNWAHF 178
           ++DEIQRIK+ NP+I HREAFSAAAKNWA +
Sbjct: 126 MRDEIQRIKSANPEIPHREAFSAAAKNWAKY 156