Miyakogusa Predicted Gene

Lj3g3v1440310.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1440310.1 tr|A9SR16|A9SR16_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_166233,29.63,0.0000002,seg,NULL,81815_g.1
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00060.1 | Symbols: MEE44 | Nucleotidyltransferase family pro...   140   2e-34

>AT4G00060.1 | Symbols: MEE44 | Nucleotidyltransferase family
           protein | chr4:21437-27996 FORWARD LENGTH=1481
          Length = 1481

 Score =  140 bits (354), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 102/149 (68%), Gaps = 3/149 (2%)

Query: 1   MAHRQLMDSLTSHISLYHSQSXXXXXXXXXXXXXRTSILKWFSSLSLHQRLAHLTIVDSS 60
           MA  QL+DSLTSHISLY                 R++IL+WFSSLS+HQRL+HLT+VD  
Sbjct: 17  MAQNQLIDSLTSHISLY-HSHSSSSSMANTIPNPRSAILRWFSSLSVHQRLSHLTVVDPK 75

Query: 61  FVQILLQMIANLRGNGHGCFILLPDLPSRDPPFLPTLCFKKSRGLLSRVADSDAAARWIF 120
           FVQILLQM+  +R  G   FI+LPDLPS     LP+LCFKKSRGL+SRV++S+ + R++F
Sbjct: 76  FVQILLQMLGYIRTKGPCSFIILPDLPSSSD--LPSLCFKKSRGLISRVSESNESERFVF 133

Query: 121 ESARLFESREGEEVAACLCSPRRLDAVAL 149
           +S RLF S EGE    C CS   LD+V +
Sbjct: 134 DSTRLFGSGEGERAQDCSCSVNSLDSVVM 162