Miyakogusa Predicted Gene

Lj3g3v1428150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1428150.1 Non Chatacterized Hit- tr|I1JKW3|I1JKW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28491
PE,31.83,2e-16,seg,NULL,CUFF.42636.1
         (314 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH) DNA...   187   8e-48

>AT4G00050.1 | Symbols: UNE10 | basic helix-loop-helix (bHLH)
           DNA-binding superfamily protein | chr4:17863-19848
           FORWARD LENGTH=399
          Length = 399

 Score =  187 bits (475), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 165/314 (52%), Gaps = 83/314 (26%)

Query: 1   MSQCVPSWDIDDNPPPPRASLRSNSNSTAPDVSMLDYDVAELTWENGQPSMHGLGLPRVP 60
           MSQCVP+  IDD P     ++RS   +TA D+ +LDY+VAELTWENGQ  +HGLG PRV 
Sbjct: 1   MSQCVPNCHIDDTPAAATTTVRS---TTAADIPILDYEVAELTWENGQLGLHGLGPPRVT 57

Query: 61  VKSSTTTTNTAPHKEAWEKPRGSGTLESIVNQATTLPQWGKSSFVGGDNIGGVYGNVLVP 120
             S+  +T               GTLESIV+QAT LP    +             + LVP
Sbjct: 58  ASSTKYSTGAG------------GTLESIVDQATRLPNPKPT-------------DELVP 92

Query: 121 WLNPHRXXXXXXXXXXNTMTMDALVPCTNRSEEKSTQVIDSAAXXXXXXXXXXXXXRVGS 180
           W + HR            M MDALVPC+N   E+ ++                   RVGS
Sbjct: 93  WFH-HRSSRA-------AMAMDALVPCSNLVHEQQSK------------PGGVGSTRVGS 132

Query: 181 CSGVAATAAREDGAFLAEVAKRGKVATTRVPANSRDQSVSGSATFGMNSQHVTLDTCDME 240
           CS         DG  +    KR +VA    P  S           G  SQ +T+DT D  
Sbjct: 133 CS---------DGRTMGG-GKRARVA----PEWS-----------GGGSQRLTMDTYD-- 165

Query: 241 FGLGFTSTSIGSLENTKTTTVDDHDSVCHSKPTRGDGAEERKRENRKSSVCTKRSRAAAI 300
             +GFTSTS+GS +N    T+DDHDSVCHS+P   D  EE K+   KSSV TKRSRAAAI
Sbjct: 166 --VGFTSTSMGSHDN----TIDDHDSVCHSRPQMED--EEEKKAGGKSSVSTKRSRAAAI 217

Query: 301 HNQSERKRRDKINQ 314
           HNQSERKRRDKINQ
Sbjct: 218 HNQSERKRRDKINQ 231