Miyakogusa Predicted Gene
- Lj3g3v1404130.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1404130.1 tr|F2CQ55|F2CQ55_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,30.72,4e-18,DUF966,Protein
of unknown function DUF966; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.42563.1
(463 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G28150.1 | Symbols: | Domain of unknown function (DUF966) | ... 310 2e-84
AT5G59790.1 | Symbols: | Domain of unknown function (DUF966) | ... 135 6e-32
AT3G46110.1 | Symbols: | Domain of unknown function (DUF966) | ... 84 1e-16
AT3G46110.2 | Symbols: | Domain of unknown function (DUF966) | ... 84 2e-16
AT5G10150.1 | Symbols: | Domain of unknown function (DUF966) | ... 73 5e-13
AT1G05577.1 | Symbols: | Domain of unknown function (DUF966) | ... 63 5e-10
>AT2G28150.1 | Symbols: | Domain of unknown function (DUF966) |
chr2:12000015-12002227 FORWARD LENGTH=540
Length = 540
Score = 310 bits (793), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 293/451 (64%), Gaps = 35/451 (7%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNSDNFSPISNVKM 60
MAS+YSWS KRSY +GFVWHDLSEDDLILPA+G EYVLKGSELFDESNSD+FSPI N+
Sbjct: 79 MASMYSWSSKRSYRNGFVWHDLSEDDLILPANGNEYVLKGSELFDESNSDHFSPIVNLAT 138
Query: 61 QNVK--LLPGPAXXXXXXXXXXXXXMNGKET--RTSQEDELSQEP--HTGSSDVSPESRD 114
QN+K ++ P+ NGK T + ++DELS SS VSP+SRD
Sbjct: 139 QNMKQIVVEPPSSRSMDDSSSSSSMNNGKGTNKHSHEDDELSPPALRSVSSSGVSPDSRD 198
Query: 115 EKSDSLSLALTEYKIYKTDGLADASTQTEEQVS-RTRAQ-KTCTRGVST-EDRSLEPECH 171
K+ S S L EYK+YK++GLADASTQT+E VS R++ +T +RGVST ED S EPE
Sbjct: 199 AKNSS-SWCLAEYKVYKSEGLADASTQTDETVSGRSKTPIETFSRGVSTDEDVSSEPETS 257
Query: 172 E---ICQAEVP-EVKDNPKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKLSSFRT 227
E + +A + +++ ++ ++++ K +TLESLIRAD SK++SFR
Sbjct: 258 ENNLVSEASCAGKERESAEISRNSV-SPPFSNSASSLGGKTDTLESLIRADVSKMNSFRI 316
Query: 228 QEEEGAWVPPTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFPSPLFSTS 287
E+E +P RL+ASN+LMQLISCGSISVK+++FGL+P+YK +F SKFPSP FS+S
Sbjct: 317 LEQEDVRMPAI-PRLRASNMLMQLISCGSISVKDNNFGLVPTYKPKFGHSKFPSPFFSSS 375
Query: 288 FMLGEFDCLAENPKLMNLRLEDKEYFSGSLIETKLKEGEA---HKVLKRSSSYNDERTYK 344
FM+G+ D L+E P LM LR+E+KEYFSGSL+ETKL++ +A + LKRSSSYN +R
Sbjct: 376 FMMGDLDRLSETPSLMGLRMEEKEYFSGSLVETKLQKKDAADSNASLKRSSSYNGDRA-S 434
Query: 345 DQKPQEDKEETSSGHSKCIPRSIKAS--LTKHPRSESMKSPISDGPRNSS-DRFDGLGIS 401
+Q + ++ SK P S KAS L K + +S+ R+SS D + +
Sbjct: 435 NQMGVAENGDSKPDSSKNNPSSRKASSILGKQ------QPLVSEKRRDSSEDTTKNIPCT 488
Query: 402 SVTSNGSSKRISEPSSGKKQSKRIDSFREEE 432
+ T + SKRI+E ++ DSFRE+E
Sbjct: 489 TKTHDACSKRITE------SLRKPDSFREDE 513
>AT5G59790.1 | Symbols: | Domain of unknown function (DUF966) |
chr5:24090950-24092804 FORWARD LENGTH=423
Length = 423
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 136/388 (35%), Positives = 177/388 (45%), Gaps = 87/388 (22%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNSDNFSPISNVKM 60
MASLYSWS KRSY +GFVWHDLSEDD I P G EYVLKGSE+ D ISN +
Sbjct: 92 MASLYSWSSKRSYKNGFVWHDLSEDDFIFPVQGQEYVLKGSEVLDSC------LISNPR- 144
Query: 61 QNVKLLPGPAXXXXXXXXXXXXXMNGKETRTSQEDELSQEPHTGSSDVSPE--SRDEKSD 118
LL ET +S D S P S D P +R
Sbjct: 145 ---SLL---------------------ET-SSFRDPRSLNPDKNSGDDIPAVINRRRNQS 179
Query: 119 SLSLALTEYKIYK--------TDGLA-DASTQTEEQVSRTRAQKTCTRGVSTEDRSLEPE 169
S+ L+EYK+YK T LA DASTQT+++ R P
Sbjct: 180 WSSIDLSEYKVYKATESSAESTQRLAADASTQTDDRRRRR-----------------RPA 222
Query: 170 CHEICQAEVPEVKDN--PKMCKDTIYXXXXXXXXXXXXXKAETLESLIRADASKL----- 222
EI + + P +N ++ +D I ETLE+LI+AD +
Sbjct: 223 KEEIEEVKSPASYENQSTELSRDEI-------SPPPSDSSPETLENLIKADGRLILRPSE 275
Query: 223 --SSFRTQEEEGAWVPPTNTRLKASNLLMQLISCGSISVKNHSFGLIPSYKHRFSDSKFP 280
+ RT E ++ R++AS +LMQLISCG++S K L+ + +
Sbjct: 276 SSTDHRTVESL------SSGRMRASAVLMQLISCGTMSFKECGPVLLKDQGLAL-NGRSG 328
Query: 281 SPLFSTSFMLGEFDCLAENPKLMNLRLEDKEYFSGSLIETKLKEGEAHKVLKRSSSYNDE 340
+ + GE E ++LEDKEYFSGSLIETK E LKRSSSYN +
Sbjct: 329 CTITRGAEDNGEERVDKELKSFGRVQLEDKEYFSGSLIETK---KELVPALKRSSSYNAD 385
Query: 341 RTYKDQKPQEDKEETSSGHSKCIPRSIK 368
R + P +K+E + +KCIPR K
Sbjct: 386 RCSR-MGPTTEKDEEEAVRAKCIPRKPK 412
>AT3G46110.1 | Symbols: | Domain of unknown function (DUF966) |
chr3:16932244-16933588 FORWARD LENGTH=343
Length = 343
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFD-ESNSDNFSPISNVK 59
MA LYSWS KR+Y +GFVW+DLS++D I P HG EYVLKGS++ D ++NS NFS +++ +
Sbjct: 65 MACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNFSAVTHRR 124
Query: 60 MQ 61
Q
Sbjct: 125 NQ 126
>AT3G46110.2 | Symbols: | Domain of unknown function (DUF966) |
chr3:16932244-16933359 FORWARD LENGTH=311
Length = 311
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFD-ESNSDNFSPISNVK 59
MA LYSWS KR+Y +GFVW+DLS++D I P HG EYVLKGS++ D ++NS NFS +++ +
Sbjct: 65 MACLYSWSSKRTYKNGFVWYDLSDEDFIFPVHGQEYVLKGSQILDLDNNSGNFSAVTHRR 124
Query: 60 MQ 61
Q
Sbjct: 125 NQ 126
>AT5G10150.1 | Symbols: | Domain of unknown function (DUF966) |
chr5:3182176-3183834 REVERSE LENGTH=414
Length = 414
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 38/46 (82%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDE 46
M S Y+WSCKRSY +GFVW+DL+E+D+I P+ EYVLKGSE+ D+
Sbjct: 91 MTSQYAWSCKRSYRNGFVWNDLAENDVIYPSDCAEYVLKGSEITDK 136
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 227 TQEEEGAWVPPTNTRLKASNLLMQLISCGSISVKNHSFGLI-PSYK-HRFSDSKFPSPLF 284
T+ E+G V P + R ++ +Q+ISCG I+ K ++ ++ P K +
Sbjct: 259 TRVEDGDPVEPGSGR---GSMWLQMISCGHIATKYYAPSVMNPRQKEENLRKGVLCKNIV 315
Query: 285 STSFMLGEFDC---LAENPKLMNLRLEDKEYFSGSLIETKLKEG-EAHKVLKRSSSYNDE 340
+ + E + ++ENP+ N + E+KEYFSGS++E+ +E A L+RS+S+N+E
Sbjct: 316 KKTVVDDEREMIRFMSENPRFGNPQAEEKEYFSGSIVESVSQERVTAEPSLRRSNSFNEE 375
Query: 341 RT--YKDQKPQEDKEETSSGHSKCIPRSIKASLTKH 374
R+ + K + KEE S KCIPR+ S +K
Sbjct: 376 RSKIVEMAKETKKKEERSMAKVKCIPRTCLMSSSKQ 411
>AT1G05577.1 | Symbols: | Domain of unknown function (DUF966) |
chr1:1662643-1664288 REVERSE LENGTH=372
Length = 372
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 1 MASLYSWSCKRSYNSGFVWHDLSEDDLILPAHGIEYVLKGSELFDESNSDNFSPI 55
M +SWSCKR Y +G+VW DL +DDLI P EYVLKGSE+ S +++ +
Sbjct: 58 MPDAFSWSCKRRYKNGYVWQDLLDDDLITPISDNEYVLKGSEILLSSPKEDYPNV 112