Miyakogusa Predicted Gene

Lj3g3v1404030.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1404030.2 tr|A8J4S8|A8J4S8_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_17541,50,0.00000000004,no description,NULL;
2OG-FeII_Oxy_2,Oxoglutarate/iron-dependent dioxygenase; ALKYLATED DNA
REPAIR PR,CUFF.42548.2
         (396 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01780.2 | Symbols:  | 2-oxoglutarate-dependent dioxygenase f...   157   1e-38
AT5G01780.1 | Symbols:  | 2-oxoglutarate-dependent dioxygenase f...   157   2e-38
AT3G14160.1 | Symbols:  | 2-oxoglutarate-dependent dioxygenase f...   155   7e-38
AT3G14140.1 | Symbols:  | 2-oxoglutarate-dependent dioxygenase f...   154   2e-37

>AT5G01780.2 | Symbols:  | 2-oxoglutarate-dependent dioxygenase
           family protein | chr5:302365-304129 REVERSE LENGTH=442
          Length = 442

 Score =  157 bits (398), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 111/172 (64%), Gaps = 6/172 (3%)

Query: 222 YDICFHG-KRNSPLIGGSTLFEKNSESSIEMEDGATKEGVLRPGMVLLKHCITHIEQVEI 280
           +DIC    +RN   I    L ++ +  ++E+   + K  V+RPGMVLLK  +T   QV+I
Sbjct: 185 FDICSSVLERNDTSIKDWILADETNRETVEV---SNKHKVIRPGMVLLKDFLTPDIQVDI 241

Query: 281 VKRCRKLGLGPGGFYQPCFASGAKLRLRMMCLGMDWDPQTKKYGNKRAFDSSKPPDIPPY 340
           VK CR+LG+ P GFYQP ++ G+KL L+MMCLG +WDPQTK   N      SK P+IP  
Sbjct: 242 VKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQTKYRKNTDI--DSKAPEIPVT 299

Query: 341 FRSLVIRAIQKAQDLIPREHDISNVEDILPSMTPDIGIVNFYTTYGRLGLHQ 392
           F  LV +AI++A  LI RE    + E ILP M+PDI IVNFY+  GRLGLHQ
Sbjct: 300 FNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 351


>AT5G01780.1 | Symbols:  | 2-oxoglutarate-dependent dioxygenase
           family protein | chr5:302365-304129 REVERSE LENGTH=387
          Length = 387

 Score =  157 bits (396), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 85/172 (49%), Positives = 111/172 (64%), Gaps = 6/172 (3%)

Query: 222 YDICFHG-KRNSPLIGGSTLFEKNSESSIEMEDGATKEGVLRPGMVLLKHCITHIEQVEI 280
           +DIC    +RN   I    L ++ +  ++E+   + K  V+RPGMVLLK  +T   QV+I
Sbjct: 130 FDICSSVLERNDTSIKDWILADETNRETVEV---SNKHKVIRPGMVLLKDFLTPDIQVDI 186

Query: 281 VKRCRKLGLGPGGFYQPCFASGAKLRLRMMCLGMDWDPQTKKYGNKRAFDSSKPPDIPPY 340
           VK CR+LG+ P GFYQP ++ G+KL L+MMCLG +WDPQTK   N      SK P+IP  
Sbjct: 187 VKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQTKYRKNTDI--DSKAPEIPVT 244

Query: 341 FRSLVIRAIQKAQDLIPREHDISNVEDILPSMTPDIGIVNFYTTYGRLGLHQ 392
           F  LV +AI++A  LI RE    + E ILP M+PDI IVNFY+  GRLGLHQ
Sbjct: 245 FNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 296


>AT3G14160.1 | Symbols:  | 2-oxoglutarate-dependent dioxygenase
           family protein | chr3:4693495-4695198 FORWARD LENGTH=455
          Length = 455

 Score =  155 bits (391), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 91/133 (68%)

Query: 260 VLRPGMVLLKHCITHIEQVEIVKRCRKLGLGPGGFYQPCFASGAKLRLRMMCLGMDWDPQ 319
           V+RPGMVLLK+ ++  +QV IV +CR+LGLG GGFYQP +   AKL L+MMCLG +WDP+
Sbjct: 232 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 291

Query: 320 TKKYGNKRAFDSSKPPDIPPYFRSLVIRAIQKAQDLIPREHDISNVEDILPSMTPDIGIV 379
           T +YG  R FD S  P IP  F   V +A++++Q L       +   D +P M PDI IV
Sbjct: 292 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 351

Query: 380 NFYTTYGRLGLHQ 392
           NFY++ GRLGLHQ
Sbjct: 352 NFYSSTGRLGLHQ 364


>AT3G14140.1 | Symbols:  | 2-oxoglutarate-dependent dioxygenase
           family protein | chr3:4688546-4690404 FORWARD LENGTH=473
          Length = 473

 Score =  154 bits (388), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 95/136 (69%)

Query: 260 VLRPGMVLLKHCITHIEQVEIVKRCRKLGLGPGGFYQPCFASGAKLRLRMMCLGMDWDPQ 319
           V+RPGMVLLK+ ++   QV IV +CR+LGLG GGFYQP F  G  L L+MMCLG +WD Q
Sbjct: 237 VIRPGMVLLKNYLSINNQVMIVNKCRQLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQ 296

Query: 320 TKKYGNKRAFDSSKPPDIPPYFRSLVIRAIQKAQDLIPREHDISNVEDILPSMTPDIGIV 379
           T++YG  R  D S PP IP  F  LV +AI++++ L+    + +   D +P + PDI +V
Sbjct: 297 TRRYGEIRPIDGSVPPRIPVEFSQLVEKAIKESKSLVATNSNETKGGDEIPLLLPDICVV 356

Query: 380 NFYTTYGRLGLHQISV 395
           NFYT+ G+LGLHQ+SV
Sbjct: 357 NFYTSTGKLGLHQVSV 372