Miyakogusa Predicted Gene

Lj3g3v1393590.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1393590.1 Non Chatacterized Hit- tr|K3ZHL0|K3ZHL0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si026062,25.91,2e-18,RNI-like,NULL; seg,NULL; F-BOX PROTEIN,
ATFBL3,NULL; F-BOX/LEUCINE RICH REPEAT PROTEIN,NULL; no
desc,CUFF.42523.1
         (386 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01720.1 | Symbols:  | RNI-like superfamily protein | chr5:26...   385   e-107
AT5G27920.1 | Symbols:  | F-box family protein | chr5:9942063-99...   209   3e-54
AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein | c...   115   7e-26
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1...    97   2e-20
AT5G23340.1 | Symbols:  | RNI-like superfamily protein | chr5:78...    97   3e-20
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch...    88   8e-18
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr...    88   8e-18
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei...    86   4e-17
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr...    85   8e-17
AT3G58530.1 | Symbols:  | RNI-like superfamily protein | chr3:21...    79   6e-15
AT1G80630.1 | Symbols:  | RNI-like superfamily protein | chr1:30...    74   2e-13
AT5G51370.2 | Symbols:  | RNI-like superfamily protein | chr5:20...    71   1e-12
AT5G51380.1 | Symbols:  | RNI-like superfamily protein | chr5:20...    70   2e-12
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276...    70   3e-12
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote...    66   4e-11
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572...    65   1e-10
AT3G07550.2 | Symbols:  | RNI-like superfamily protein | chr3:24...    64   2e-10
AT3G07550.1 | Symbols:  | RNI-like superfamily protein | chr3:24...    64   2e-10
AT5G07670.1 | Symbols:  | RNI-like superfamily protein | chr5:24...    61   1e-09
AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein | chr...    59   8e-09
AT1G55590.1 | Symbols:  | RNI-like superfamily protein | chr1:20...    59   8e-09
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978...    58   1e-08
AT1G80570.2 | Symbols:  | RNI-like superfamily protein | chr1:30...    57   3e-08
AT1G80570.1 | Symbols:  | RNI-like superfamily protein | chr1:30...    57   3e-08
AT1G80570.3 | Symbols:  | RNI-like superfamily protein | chr1:30...    57   3e-08
AT1G15740.1 | Symbols:  | Leucine-rich repeat family protein | c...    53   3e-07
AT5G40470.1 | Symbols:  | RNI-like superfamily protein | chr5:16...    53   3e-07
AT5G21900.1 | Symbols:  | RNI-like superfamily protein | chr5:72...    51   1e-06
AT2G17020.1 | Symbols:  | F-box/RNI-like superfamily protein | c...    50   3e-06
AT4G30640.1 | Symbols:  | RNI-like superfamily protein | chr4:14...    50   3e-06
AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 ...    49   5e-06
AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 ...    49   5e-06
AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 | chr5...    49   6e-06
AT4G05497.1 | Symbols:  | RNI-like superfamily protein | chr4:27...    49   6e-06
AT5G51370.1 | Symbols:  | RNI-like superfamily protein | chr5:20...    48   9e-06

>AT5G01720.1 | Symbols:  | RNI-like superfamily protein |
           chr5:267118-270391 REVERSE LENGTH=665
          Length = 665

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 218/372 (58%), Positives = 267/372 (71%)

Query: 13  VTLALANGLSKLSMLQSIILDGCLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIV 72
           ++L  A+ L K+S LQSI LDGC VT DGL+AIG L  SL E+SLSKC  VTDE LS +V
Sbjct: 292 ISLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLV 351

Query: 73  SKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEE 132
            K  DLRKLDITCCR ++ VSI  IANSC  L SLKMESC+LV +EAF L+GQKC  LEE
Sbjct: 352 MKLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEE 411

Query: 133 LDITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGIT 192
           LD+TDNE+DDEGLKSIS+C  LSSLK+GICLNITD+G++YIGM CS L+ELDLYRS GIT
Sbjct: 412 LDLTDNEIDDEGLKSISSCLSLSSLKLGICLNITDKGLSYIGMGCSNLRELDLYRSVGIT 471

Query: 193 DLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAM 252
           D+GIS IA GC  LE IN SYC +ITD SL+SLSKC  L+T E RGC  +TS GLA+IA+
Sbjct: 472 DVGISTIAQGCIHLETINISYCQDITDKSLVSLSKCSLLQTFESRGCPNITSQGLAAIAV 531

Query: 253 NCKQLICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLSLASISCLQSFTI 312
            CK+L  VD+KKC +I+D+G++ LA+FS++L+QIN+S ++VT+VGLLSLA+I CLQ+  +
Sbjct: 532 RCKRLAKVDLKKCPSINDAGLLALAHFSQNLKQINVSDTAVTEVGLLSLANIGCLQNIAV 591

Query: 313 XXXXXXXXXXXXXXXXXXXXXTKVKXXXXXXXXXXXXXXXXVEARGCVFEWRDKVFQAEL 372
                                 K K                +EARGC F W+D   QAEL
Sbjct: 592 VNSSGLRPSGVAAALLGCGGLRKAKLHASLRSLLPLSLIHHLEARGCAFLWKDNTLQAEL 651

Query: 373 DPKCWKLQLEDL 384
           DPK WK QLE++
Sbjct: 652 DPKYWKQQLEEM 663



 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 5/251 (1%)

Query: 66  EALSFIVSKHTDLRKLDITCCRMITDVSIASIA-NSCTSLTSLKMESCTLVPQEAFVLMG 124
           + L  I++++ +   LD+T C  +TD +++ +   S  +L SL +           + + 
Sbjct: 62  DYLPRILTRYRNTTDLDLTFCPRVTDYALSVVGCLSGPTLRSLDLSRSGSFSAAGLLRLA 121

Query: 125 QKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKEL 183
            KC  L E+D+++  E+ D     ++    L  LK+G C  +TD G+  I + C KL  +
Sbjct: 122 LKCVNLVEIDLSNATEMRDADAAVVAEARSLERLKLGRCKMLTDMGIGCIAVGCKKLNTV 181

Query: 184 DLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVT 243
            L    G+ DLG+  +A  C  +  ++ SY   IT   L  + K ++L+ L + GC  V 
Sbjct: 182 SLKWCVGVGDLGVGLLAVKCKDIRTLDLSYLP-ITGKCLHDILKLQHLEELLLEGCFGVD 240

Query: 244 SIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSY-SSVTDVGLL-SL 301
              L S+  +CK L  +D   C N+   G+  L   +  L++++LS+ SSV  +    SL
Sbjct: 241 DDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGAGYLQRLDLSHCSSVISLDFASSL 300

Query: 302 ASISCLQSFTI 312
             +S LQS  +
Sbjct: 301 KKVSALQSIRL 311



 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 2/213 (0%)

Query: 78  LRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITD 137
           L +L +  C+M+TD+ I  IA  C  L ++ ++ C  V      L+  KC  +  LD++ 
Sbjct: 152 LERLKLGRCKMLTDMGIGCIAVGCKKLNTVSLKWCVGVGDLGVGLLAVKCKDIRTLDLSY 211

Query: 138 NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGIS 197
             +  + L  I     L  L +  C  + D  +  +   C  LK+LD      +T  G++
Sbjct: 212 LPITGKCLHDILKLQHLEELLLEGCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLT 271

Query: 198 AIACGCPGLEIINTSYCTNITDGSLI-SLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQ 256
           ++  G   L+ ++ S+C+++       SL K   L+++ + GC  VT  GL +I   C  
Sbjct: 272 SLLSGAGYLQRLDLSHCSSVISLDFASSLKKVSALQSIRLDGC-SVTPDGLKAIGTLCNS 330

Query: 257 LICVDIKKCYNIDDSGMIPLAYFSKSLRQINLS 289
           L  V + KC ++ D G+  L    K LR+++++
Sbjct: 331 LKEVSLSKCVSVTDEGLSSLVMKLKDLRKLDIT 363


>AT5G27920.1 | Symbols:  | F-box family protein |
           chr5:9942063-9944507 REVERSE LENGTH=642
          Length = 642

 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/304 (41%), Positives = 187/304 (61%), Gaps = 1/304 (0%)

Query: 1   MSLTNGLHLIFQVTLALANGLSKLSMLQSIILDGCLVTSDGLRAIGNLRISLWELSLSKC 60
           + L    H + +V+ +    +  L  L++I +DG  V+   L ++ +   SL E+ LS+C
Sbjct: 276 IQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRC 335

Query: 61  SGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAF 120
             VTD  +  +     +L+ L++ CC  +TDV+I+++A SC +L +LK+ESC L+ ++  
Sbjct: 336 VDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGL 395

Query: 121 VLMGQKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSK 179
             +G     ++ELD+TD   V+D GL+ IS CS L  LK+G+C NI+D+G+ +IG  CSK
Sbjct: 396 QSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSK 455

Query: 180 LKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGC 239
           L ELDLYR  G  D G++A++ GC  L  +  SYC  +TD  +  + +   L  LE+RG 
Sbjct: 456 LLELDLYRCAGFGDDGLAALSRGCKSLNRLILSYCCELTDTGVEQIRQLELLSHLELRGL 515

Query: 240 LLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLL 299
             +T +GLA+IA  CK+L  +D+K C NIDDSG   LAYFSK+LRQINL   SV+D  L 
Sbjct: 516 KNITGVGLAAIASGCKKLGYLDVKLCENIDDSGFWALAYFSKNLRQINLCNCSVSDTALC 575

Query: 300 SLAS 303
            L S
Sbjct: 576 MLMS 579



 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/351 (22%), Positives = 159/351 (45%), Gaps = 54/351 (15%)

Query: 15  LALANGLSKLSMLQSIILDGCLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSK 74
           LAL   +S L +    +     V + GL  +  +  +L  + +S C G  D   + + S 
Sbjct: 86  LALDGAISTLGIKSLNLSRSTAVRARGLETLARMCHALERVDVSHCWGFGDREAAAL-SS 144

Query: 75  HTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELD 134
            T LR+L +  C  ++DV +A I   C++L  + ++ C  +      L+ + C  L+ LD
Sbjct: 145 ATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEISDLGIDLLCKICKGLKSLD 204

Query: 135 ITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDL 194
           ++  ++ ++ ++SI+   +L  L +  C  I D G+ ++      L+E+D+ R   ++  
Sbjct: 205 VSYLKITNDSIRSIALLVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLS 264

Query: 195 GISAIACGCPGLEIINTSY----------------------------------------- 213
           G+ +I  G P ++++  S+                                         
Sbjct: 265 GLISIVRGHPDIQLLKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSC 324

Query: 214 ----------CTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDI 262
                     C ++TD  +ISL++ C NLKTL +  C  VT + ++++A +C+ L  + +
Sbjct: 325 RSLMEIGLSRCVDVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKL 384

Query: 263 KKCYNIDDSGMIPLAYFSKSLRQINLSY-SSVTDVGLLSLASISCLQSFTI 312
           + C+ I + G+  L  +S  +++++L+    V D GL  ++  S LQ   +
Sbjct: 385 ESCHLITEKGLQSLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKL 435



 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 4/153 (2%)

Query: 154 LSSLKVGICLNITDRGVAYIGMCCS----KLKELDLYRSTGITDLGISAIACGCPGLEII 209
           LSSL + +C  + D  V  + +  +     +K L+L RST +   G+  +A  C  LE +
Sbjct: 67  LSSLDLSVCPKLDDDVVLRLALDGAISTLGIKSLNLSRSTAVRARGLETLARMCHALERV 126

Query: 210 NTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNID 269
           + S+C    D    +LS    L+ L++  CL ++ +GLA I + C  L  + +K C  I 
Sbjct: 127 DVSHCWGFGDREAAALSSATGLRELKMDKCLSLSDVGLARIVVGCSNLNKISLKWCMEIS 186

Query: 270 DSGMIPLAYFSKSLRQINLSYSSVTDVGLLSLA 302
           D G+  L    K L+ +++SY  +T+  + S+A
Sbjct: 187 DLGIDLLCKICKGLKSLDVSYLKITNDSIRSIA 219


>AT4G15475.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr4:8845927-8848701 FORWARD LENGTH=610
          Length = 610

 Score =  115 bits (287), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 162/365 (44%), Gaps = 65/365 (17%)

Query: 2   SLTNGLHLIFQVTLALANGLSKLSM---------LQSIILDGCLVTSDGLRAIGNLRISL 52
           +L NG   I  ++L     +S + +         L+S+ L GC V   GL A+G     L
Sbjct: 134 ALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGCYVGDQGLAAVGKFCKQL 193

Query: 53  WELSLSKCSGVTDEA-LSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMES 111
            EL+L  C G+TD   +  +V     L+ + +     ITD+S+ ++ + C  L  L ++S
Sbjct: 194 EELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDS 253

Query: 112 ------------------------CTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLK 146
                                   C  V   AF  +G+ C  LE L +       D+G++
Sbjct: 254 EYIHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMR 313

Query: 147 SIS---------------------------NCSRLSSLKVGICLNITDRGVAYIGMCCSK 179
           +I                             C  L  +++  C NI  RG+  IG  C +
Sbjct: 314 AIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPR 373

Query: 180 LKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRG 238
           LKEL L     I +  +  I  GC  LEI++   C+ I D ++ S++K CRNLK L IR 
Sbjct: 374 LKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRR 433

Query: 239 CLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSY-SSVTDVG 297
           C  + + G+ SI  +CK L  + ++ C  + +  +I +     SL+Q+N+S  + ++D G
Sbjct: 434 CYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGC-SLQQLNVSGCNQISDAG 492

Query: 298 LLSLA 302
           + ++A
Sbjct: 493 ITAIA 497



 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 6/252 (2%)

Query: 16  ALANGLSKLSMLQSIILDGCL-VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSK 74
           A+A+G  +L  ++   ++GC  + + G+ AIG     L EL+L  C  + + AL  I   
Sbjct: 340 AIAHGCKELERVE---INGCHNIGTRGIEAIGKSCPRLKELALLYCQRIGNSALQEIGKG 396

Query: 75  HTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELD 134
              L  L +  C  I D+++ SIA  C +L  L +  C  +  +  + +G+ C  L EL 
Sbjct: 397 CKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELS 456

Query: 135 ITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITD 193
           +   ++V ++ L +I     L  L V  C  I+D G+  I   C +L  LD+     I D
Sbjct: 457 LRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQNIGD 516

Query: 194 LGISAIACGCPGLEIINTSYCTNITDGSLISL-SKCRNLKTLEIRGCLLVTSIGLASIAM 252
           + ++ +  GCP L+ +  S+C +ITD  L  L  KC+ L+T  +  C  +TS G+A++  
Sbjct: 517 MPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITSAGVATVVS 576

Query: 253 NCKQLICVDIKK 264
           +C  +  V I+K
Sbjct: 577 SCPHIKKVLIEK 588



 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 5/270 (1%)

Query: 38  TSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASI 97
           T  G+RAIG     L +L+LS C  V+ + L  I     +L +++I  C  I    I +I
Sbjct: 308 TDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAI 367

Query: 98  ANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISN-CSRLS 155
             SC  L  L +  C  +   A   +G+ C  LE L + D + + D  + SI+  C  L 
Sbjct: 368 GKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLK 427

Query: 156 SLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCT 215
            L +  C  I ++G+  IG  C  L EL L     + +  + AI  GC  L+ +N S C 
Sbjct: 428 KLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCS-LQQLNVSGCN 486

Query: 216 NITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMI 274
            I+D  + ++++ C  L  L+I     +  + LA +   C  L  + +  C++I D+G+ 
Sbjct: 487 QISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLN 546

Query: 275 PLAYFSKSLRQINLSY-SSVTDVGLLSLAS 303
            L    K L   ++ Y   +T  G+ ++ S
Sbjct: 547 HLVQKCKLLETCHMVYCPGITSAGVATVVS 576



 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 58/298 (19%)

Query: 61  SGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAF 120
           S +TD  L+ + +    +  L +  C  ++ V + S+A  CTSL SL ++ C  V  +  
Sbjct: 125 SSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGC-YVGDQGL 183

Query: 121 VLMGQKCHYLEELD---------------------------------ITD---------- 137
             +G+ C  LEEL+                                 ITD          
Sbjct: 184 AAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGSHC 243

Query: 138 ----------NEVDDEGLKSISN-CSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLY 186
                       + D+GL +++  C RL +LK+  C+++TD   A +G  C+ L+ L LY
Sbjct: 244 KLLEVLYLDSEYIHDKGLIAVAQGCHRLKNLKLQ-CVSVTDVAFAAVGELCTSLERLALY 302

Query: 187 RSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSI 245
                TD G+ AI  G   L+ +  S C  ++   L +++  C+ L+ +EI GC  + + 
Sbjct: 303 SFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTR 362

Query: 246 GLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKSLRQINL-SYSSVTDVGLLSLA 302
           G+ +I  +C +L  + +  C  I +S +  +    KSL  ++L   S + D+ + S+A
Sbjct: 363 GIEAIGKSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIA 420



 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 77/119 (64%), Gaps = 4/119 (3%)

Query: 188 STGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLS-KCRNLKTLEIRGCLLVTSIG 246
           S+ +TD G++A+A G P +E ++  +C N++   L SL+ KC +LK+L+++GC  V   G
Sbjct: 124 SSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKCTSLKSLDLQGC-YVGDQG 182

Query: 247 LASIAMNCKQLICVDIKKCYNIDDSGMIPLAYF-SKSLRQINLSYSS-VTDVGLLSLAS 303
           LA++   CKQL  ++++ C  + D G+I L    SKSL+ I ++ S+ +TD+ L ++ S
Sbjct: 183 LAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVGS 241


>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
           chr2:10848018-10850275 REVERSE LENGTH=628
          Length = 628

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 157/330 (47%), Gaps = 42/330 (12%)

Query: 13  VTLALANGLSKLSMLQSIILDGCLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIV 72
           V  A   GL KLS+  S   +   V+  GLR+IG    SL  LSL   S +TD  L  I 
Sbjct: 143 VGTAGRGGLGKLSIRGS---NSAKVSDLGLRSIGRSCPSLGSLSLWNVSTITDNGLLEIA 199

Query: 73  SKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEE 132
                L KL++  C  ITD  + +IA SC +LT L +E+C+ +  E  + + + C  L+ 
Sbjct: 200 EGCAQLEKLELNRCSTITDKGLVAIAKSCPNLTELTLEACSRIGDEGLLAIARSCSKLKS 259

Query: 133 LDITDNE-VDDEGLKSI---SNCSRLSSLKVGICLNITDRGVAYI--------------- 173
           + I +   V D+G+ S+   + CS L+ LK+ + LN+TD  +A +               
Sbjct: 260 VSIKNCPLVRDQGIASLLSNTTCS-LAKLKLQM-LNVTDVSLAVVGHYGLSITDLVLAGL 317

Query: 174 -------------GMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDG 220
                        G+   KL  L +    G+TD+G+ ++  GCP ++    S    ++D 
Sbjct: 318 SHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDN 377

Query: 221 SLISLSKCR-NLKTLEIRGCLLVTSIGLASIAMNC-KQLICVDIKKCYNIDD-SGMIPLA 277
            L+S +K   +L++L++  C  VT  G     +NC ++L    +  C +I D +  +P +
Sbjct: 378 GLVSFAKASLSLESLQLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPAS 437

Query: 278 YFSKSLRQINLSYSSVTDVGLLSLASISCL 307
               +LR  +LS  +    G  +LA+I  L
Sbjct: 438 SHCSALR--SLSIRNCPGFGDANLAAIGKL 465



 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 119/242 (49%), Gaps = 11/242 (4%)

Query: 52  LWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMES 111
           L  L+++ C GVTD  L  +     +++K  I+   +++D  + S A +  SL SL++E 
Sbjct: 337 LNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLSLESLQLEE 396

Query: 112 CTLVPQEAFVLM----GQKCHYLEELDITDNEVDDEGLKSISNCSRLSSLKVGICLNITD 167
           C  V Q  F       G+K      ++         GL + S+CS L SL +  C    D
Sbjct: 397 CHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCPGFGD 456

Query: 168 RGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK 227
             +A IG  C +L+++DL    GIT+ G   +      L  IN S C+N+TD  +IS   
Sbjct: 457 ANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQS--SLVKINFSGCSNLTD-RVISAIT 513

Query: 228 CRN---LKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKSLR 284
            RN   L+ L I GC  +T   L SIA NC+ L  +DI KC  I DSG+  LA   K   
Sbjct: 514 ARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCA-ISDSGIQALASSDKLKL 572

Query: 285 QI 286
           QI
Sbjct: 573 QI 574


>AT5G23340.1 | Symbols:  | RNI-like superfamily protein |
           chr5:7856314-7857983 FORWARD LENGTH=405
          Length = 405

 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 127/254 (50%), Gaps = 9/254 (3%)

Query: 55  LSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTL 114
           L+L  C G+TD  L+ I    + L+ LD++ CR ++D  ++++A  C  L +L +  C  
Sbjct: 103 LNLHNCKGITDTGLASIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRF 162

Query: 115 VPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKS-ISNCSRLSSLKVGICLNITDRGVAY 172
           +  E+   + ++C  LE L +     + D GL   +  C ++ SL +  C N+ D GV+ 
Sbjct: 163 ITDESLKSLSERCRDLEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSS 222

Query: 173 IG-MCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLS-KCRN 230
           +   C S LK L L     + +  IS++A  C  LE +    C +I+D S++ L+  C++
Sbjct: 223 VAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKD 282

Query: 231 -LKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFS----KSLRQ 285
            LK L +  CL ++   L+ I   CK L  +DI  C  + D+    L        K L+ 
Sbjct: 283 SLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLGLKVLKV 342

Query: 286 INLSYSSVTDVGLL 299
            N +  +VT +G L
Sbjct: 343 SNCTKITVTGIGKL 356



 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 136/274 (49%), Gaps = 12/274 (4%)

Query: 42  LRAIGNLRISLWELSLSKC------SGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIA 95
           LR + +    + EL LS+        GVTD  L+ I      LR L++  C+ ITD  +A
Sbjct: 58  LRRLASRFTQIVELDLSQSISRSFYPGVTDSDLAVISEGFKFLRVLNLHNCKGITDTGLA 117

Query: 96  SIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISN-CSR 153
           SI    + L  L +  C  +  +    + + CH L  L +     + DE LKS+S  C  
Sbjct: 118 SIGRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALHLAGCRFITDESLKSLSERCRD 177

Query: 154 LSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCP-GLEIINTS 212
           L +L +  C NITD G+A +   C K+K LD+ + + + D G+S++A  C   L+ +   
Sbjct: 178 LEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNVGDAGVSSVAKACASSLKTLKLL 237

Query: 213 YCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQ-LICVDIKKCYNIDD 270
            C  + + S+ SL++ C+NL+TL I GC  ++   +  +A +CK  L  + +  C NI D
Sbjct: 238 DCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRMDWCLNISD 297

Query: 271 SGMIPLAYFSKSLRQINLS-YSSVTDVGLLSLAS 303
           S +  +    K+L  +++     VTD     L S
Sbjct: 298 SSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGS 331



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 15/165 (9%)

Query: 51  SLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCT-SLTSLKM 109
           SL  L L  C  V +E++S +     +L  L I  CR I+D SI  +A+SC  SL +L+M
Sbjct: 230 SLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIMLLADSCKDSLKNLRM 289

Query: 110 ESCTLVPQEAFVLMGQKCHYLEELDI------TDNEVDDEGLKSISNCSRLSSLKVGICL 163
           + C  +   +   + ++C  LE LDI      TD    D G   +     L  LKV  C 
Sbjct: 290 DWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVLG---LKVLKVSNCT 346

Query: 164 NITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEI 208
            IT  G+  +   CS L+ +D+     +T+     + C   GLE 
Sbjct: 347 KITVTGIGKLLDKCSSLEYIDVRSLPHVTE-----VRCSEAGLEF 386


>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
           chr1:28940888-28942401 FORWARD LENGTH=360
          Length = 360

 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 3/166 (1%)

Query: 65  DEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMG 124
           D A+  I +   +L+ LD++    ITD S+ S+A  CT+LT L +  CT     A   + 
Sbjct: 106 DNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLT 165

Query: 125 QKCHYLEELDITD--NEVDDEGLKSI-SNCSRLSSLKVGICLNITDRGVAYIGMCCSKLK 181
           + C  L+ L++      V D  L++I  NC++L SL +G C NI+D GV  +   C  L+
Sbjct: 166 RFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLR 225

Query: 182 ELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK 227
            LDL     ITD  + A+A  C  L  +   YC NITD ++ SL++
Sbjct: 226 TLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQ 271



 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 3/142 (2%)

Query: 165 ITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLIS 224
           + D  V  I   C +L++LDL +S+ ITD  + ++A GC  L  +N S CT+ +D +L  
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163

Query: 225 LSK-CRNLKTLEIRGCL-LVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKS 282
           L++ CR LK L + GC+  V+   L +I  NC QL  +++  C NI D G++ LAY    
Sbjct: 164 LTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPD 223

Query: 283 LRQINL-SYSSVTDVGLLSLAS 303
           LR ++L S   +TD  +++LA+
Sbjct: 224 LRTLDLCSCVLITDESVVALAN 245



 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 108/205 (52%), Gaps = 5/205 (2%)

Query: 78  LRKLDITCCRMITDVSIASIANSCTSLTSLKM-ESCTLVPQEAFVLMGQKCHYLEELDIT 136
           L +L ++ C+   +  + S+A     L +L + +    +   A   +   CH L++LD++
Sbjct: 66  LTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLS 125

Query: 137 DN-EVDDEGLKSISN-CSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRST-GITD 193
            + ++ D  L S++  C+ L+ L +  C + +D  +A++   C KLK L+L      ++D
Sbjct: 126 KSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSD 185

Query: 194 LGISAIACGCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAM 252
             + AI   C  L+ +N  +C NI+D  ++SL+  C +L+TL++  C+L+T   + ++A 
Sbjct: 186 NTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALAN 245

Query: 253 NCKQLICVDIKKCYNIDDSGMIPLA 277
            C  L  + +  C NI D  M  LA
Sbjct: 246 RCIHLRSLGLYYCRNITDRAMYSLA 270



 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 7/133 (5%)

Query: 34  GCL--VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITD 91
           GC+  V+ + L+AIG     L  L+L  C  ++D+ +  +     DLR LD+  C +ITD
Sbjct: 178 GCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITD 237

Query: 92  VSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQ---KCHYLEELDITDNEVDDEGLKS- 147
            S+ ++AN C  L SL +  C  +   A   + Q   K  +     +   + D+EGL+S 
Sbjct: 238 ESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSL 297

Query: 148 -ISNCSRLSSLKV 159
            IS C+ L+   V
Sbjct: 298 NISQCTYLTPSAV 310


>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
           protein | chr1:28940888-28942401 FORWARD LENGTH=360
          Length = 360

 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/166 (35%), Positives = 89/166 (53%), Gaps = 3/166 (1%)

Query: 65  DEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMG 124
           D A+  I +   +L+ LD++    ITD S+ S+A  CT+LT L +  CT     A   + 
Sbjct: 106 DNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLT 165

Query: 125 QKCHYLEELDITD--NEVDDEGLKSI-SNCSRLSSLKVGICLNITDRGVAYIGMCCSKLK 181
           + C  L+ L++      V D  L++I  NC++L SL +G C NI+D GV  +   C  L+
Sbjct: 166 RFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLR 225

Query: 182 ELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK 227
            LDL     ITD  + A+A  C  L  +   YC NITD ++ SL++
Sbjct: 226 TLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQ 271



 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 84/142 (59%), Gaps = 3/142 (2%)

Query: 165 ITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLIS 224
           + D  V  I   C +L++LDL +S+ ITD  + ++A GC  L  +N S CT+ +D +L  
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163

Query: 225 LSK-CRNLKTLEIRGCL-LVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKS 282
           L++ CR LK L + GC+  V+   L +I  NC QL  +++  C NI D G++ LAY    
Sbjct: 164 LTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPD 223

Query: 283 LRQINL-SYSSVTDVGLLSLAS 303
           LR ++L S   +TD  +++LA+
Sbjct: 224 LRTLDLCSCVLITDESVVALAN 245



 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 108/205 (52%), Gaps = 5/205 (2%)

Query: 78  LRKLDITCCRMITDVSIASIANSCTSLTSLKM-ESCTLVPQEAFVLMGQKCHYLEELDIT 136
           L +L ++ C+   +  + S+A     L +L + +    +   A   +   CH L++LD++
Sbjct: 66  LTRLSLSWCKKNMNSLVLSLAPKFVKLQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLS 125

Query: 137 DN-EVDDEGLKSISN-CSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRST-GITD 193
            + ++ D  L S++  C+ L+ L +  C + +D  +A++   C KLK L+L      ++D
Sbjct: 126 KSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSD 185

Query: 194 LGISAIACGCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAM 252
             + AI   C  L+ +N  +C NI+D  ++SL+  C +L+TL++  C+L+T   + ++A 
Sbjct: 186 NTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITDESVVALAN 245

Query: 253 NCKQLICVDIKKCYNIDDSGMIPLA 277
            C  L  + +  C NI D  M  LA
Sbjct: 246 RCIHLRSLGLYYCRNITDRAMYSLA 270



 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 7/133 (5%)

Query: 34  GCL--VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITD 91
           GC+  V+ + L+AIG     L  L+L  C  ++D+ +  +     DLR LD+  C +ITD
Sbjct: 178 GCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCSCVLITD 237

Query: 92  VSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQ---KCHYLEELDITDNEVDDEGLKS- 147
            S+ ++AN C  L SL +  C  +   A   + Q   K  +     +   + D+EGL+S 
Sbjct: 238 ESVVALANRCIHLRSLGLYYCRNITDRAMYSLAQSGVKNKHEMWRAVKKGKFDEEGLRSL 297

Query: 148 -ISNCSRLSSLKV 159
            IS C+ L+   V
Sbjct: 298 NISQCTYLTPSAV 310


>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
           chr1:7497479-7499386 FORWARD LENGTH=360
          Length = 360

 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 3/166 (1%)

Query: 65  DEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMG 124
           D A+  I +   +L++LD++    ITD S+ ++A+ C  LT L +  CT     A   + 
Sbjct: 106 DNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLT 165

Query: 125 QKCHYLEELDITD--NEVDDEGLKSI-SNCSRLSSLKVGICLNITDRGVAYIGMCCSKLK 181
           + C  L+ L++      V D  L++I +NC+++ SL +G C NI+D GV  +   C  L+
Sbjct: 166 RFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLR 225

Query: 182 ELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK 227
            LDL     ITD  + A+A  C  L  +   YC NITD ++ SL++
Sbjct: 226 TLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQ 271



 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/141 (38%), Positives = 82/141 (58%), Gaps = 3/141 (2%)

Query: 165 ITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLIS 224
           + D  V  I   C +L+ELDL +S  ITD  + A+A GCP L  +N S CT+ +D ++  
Sbjct: 104 LEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAY 163

Query: 225 LSK-CRNLKTLEIRGCL-LVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKS 282
           L++ CR LK L + GC+  VT   L +I  NC Q+  +++  C NI D G++ LAY    
Sbjct: 164 LTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPD 223

Query: 283 LRQINL-SYSSVTDVGLLSLA 302
           LR ++L     +TD  +++LA
Sbjct: 224 LRTLDLCGCVLITDESVVALA 244



 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 12/223 (5%)

Query: 60  CSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKM-ESCTLVPQE 118
           C+G  D A+SF       L +L ++ C    +  + S+      L +L + +    +   
Sbjct: 55  CTGWRD-AISF------GLTRLRLSWCNNNMNSLVLSLVPKFVKLQTLNLRQDKPQLEDN 107

Query: 119 AFVLMGQKCHYLEELDITDN-EVDDEGLKSISN-CSRLSSLKVGICLNITDRGVAYIGMC 176
           A   +   CH L+ELD++ + ++ D  L ++++ C  L+ L +  C + +D  +AY+   
Sbjct: 108 AVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRF 167

Query: 177 CSKLKELDLYRST-GITDLGISAIACGCPGLEIINTSYCTNITDGSLISLS-KCRNLKTL 234
           C KLK L+L      +TD  + AI   C  ++ +N  +C NI+D  ++SL+  C +L+TL
Sbjct: 168 CRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTL 227

Query: 235 EIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLA 277
           ++ GC+L+T   + ++A  C  L  + +  C NI D  M  LA
Sbjct: 228 DLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLA 270



 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 7/140 (5%)

Query: 27  LQSIILDGCL--VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDIT 84
           L+ + L GC+  VT + L AIGN    +  L+L  C  ++D+ +  +     DLR LD+ 
Sbjct: 171 LKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLC 230

Query: 85  CCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQ---KCHYLEELDITDNEVD 141
            C +ITD S+ ++A+ C  L SL +  C  +   A   + Q   K        +   + D
Sbjct: 231 GCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQSGVKNKPGSWKSVKKGKYD 290

Query: 142 DEGLKS--ISNCSRLSSLKV 159
           +EGL+S  IS C+ L+   V
Sbjct: 291 EEGLRSLNISQCTALTPSAV 310


>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
           chr5:8794842-8796882 REVERSE LENGTH=623
          Length = 623

 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 22/288 (7%)

Query: 37  VTSDGLRAIGNLR--ISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSI 94
           V   G   +GN +    L  LS+  C G+TD  L  + +   DL+ + +  C +++   +
Sbjct: 310 VNEKGFWVMGNAKGLKKLKSLSVMSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGL 369

Query: 95  ASIANSCTSLTSLKMESCTLVPQEAFVLMG--------QKCHYLEE-LDITDNEVDDEGL 145
            ++A S  SL SLK+E C  + Q  F LMG         K   L   L I+D   +    
Sbjct: 370 VALAKSALSLESLKLEECHRINQ--FGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLP 427

Query: 146 KSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISA-IACGCP 204
               +  R  SL +  C    D  +A++G  C +L++++L    G+TD G+   +     
Sbjct: 428 SPSCSSLR--SLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNV 485

Query: 205 GLEIINTSYCTNITDGSLISLSKC--RNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDI 262
           GL  +N S C N++D ++ ++S C  R L++L + GC  +T+  L ++A NC  +  +DI
Sbjct: 486 GLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDI 545

Query: 263 KKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLSLASISCLQSF 310
                + D G+  LA    S   +NL   S+     ++  S +C+Q  
Sbjct: 546 SNTL-VSDHGIKALA---SSPNHLNLQVLSIGGCSSITDKSKACIQKL 589



 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 34/267 (12%)

Query: 37  VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIAS 96
           VT  GL A+ +   SL  +SL     V+D  LS I      + KLD++ C  ITD  + +
Sbjct: 154 VTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVA 213

Query: 97  IANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSI--SNCSR 153
           IA +C +L+ L ++SC+ V  E    + ++C  L  + I     + D+G+  +     S 
Sbjct: 214 IAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSY 273

Query: 154 LSSLKVGICLNITDRGVAYIGMCCS----------------------------KLKELDL 185
           L+ +K+ + LN++   +A IG   +                            KLK L +
Sbjct: 274 LTKVKLQM-LNVSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSV 332

Query: 186 YRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCR-NLKTLEIRGCLLVTS 244
               G+TD+G+ A+  GCP L+ ++ + C  ++   L++L+K   +L++L++  C  +  
Sbjct: 333 MSCRGMTDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQ 392

Query: 245 IGLASIAMNC-KQLICVDIKKCYNIDD 270
            GL    MNC  +L    +  C  I D
Sbjct: 393 FGLMGFLMNCGSKLKAFSLANCLGISD 419



 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 7/140 (5%)

Query: 165 ITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLIS 224
           +TD G+  +   C  L+ + L+    ++DLG+S IA  CP +E ++ S C  ITD  L++
Sbjct: 154 VTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSCPMIEKLDLSRCPGITDSGLVA 213

Query: 225 LSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPL-----AY 278
           +++ C NL  L I  C  V + GL +IA  C  L  + I+ C  I D G+  L     +Y
Sbjct: 214 IAENCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSY 273

Query: 279 FSK-SLRQINLSYSSVTDVG 297
            +K  L+ +N+S  S+  +G
Sbjct: 274 LTKVKLQMLNVSGLSLAVIG 293



 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 127/256 (49%), Gaps = 12/256 (4%)

Query: 27  LQSIILDGCL-VTSDGLRAIGNLRISLWELSLSKCSGVTDEAL-SFIVSKHTDLRKLDIT 84
           L+ + L+ CL V+  GL A+    +SL  L L +C  +    L  F+++  + L+   + 
Sbjct: 353 LKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGFLMNCGSKLKAFSLA 412

Query: 85  CCRMITDVSIASIANSCTSLT--SLKMESCTLVPQEAFVLMGQKCHYLEELDITD-NEVD 141
            C  I+D +  S   S +  +  SL +  C      +   +G+ CH L+++++   N V 
Sbjct: 413 NCLGISDFNSESSLPSPSCSSLRSLSIRCCPGFGDASLAFLGKFCHQLQDVELCGLNGVT 472

Query: 142 DEGLKSISNCSRLSSLKVGI--CLNITDRGVAYIGMCCSK-LKELDLYRSTGITDLGISA 198
           D G++ +   + +  +KV +  C+N++D  V+ I +C  + L+ L+L     IT+  + A
Sbjct: 473 DAGVRELLQSNNVGLVKVNLSECINVSDNTVSAISVCHGRTLESLNLDGCKNITNASLVA 532

Query: 199 IACGCPGLEIINTSYCTNITDGSLISLSKCRN---LKTLEIRGCLLVTSIGLASIAMNCK 255
           +A  C  +  ++ S  T ++D  + +L+   N   L+ L I GC  +T    A I    +
Sbjct: 533 VAKNCYSVNDLDISN-TLVSDHGIKALASSPNHLNLQVLSIGGCSSITDKSKACIQKLGR 591

Query: 256 QLICVDIKKCYNIDDS 271
            L+ ++I++C  I  S
Sbjct: 592 TLLGLNIQRCGRISSS 607


>AT3G58530.1 | Symbols:  | RNI-like superfamily protein |
           chr3:21645759-21648219 FORWARD LENGTH=353
          Length = 353

 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 11/191 (5%)

Query: 37  VTSDGLRA-IGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIA 95
           VT  G+R  + N R  + +L+LS C  +TD+++  +   + DL  L+IT C  ITD  + 
Sbjct: 150 VTDAGIRNLVKNCR-HITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLL 208

Query: 96  SIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITD----NEVDDEGLKSISNC 151
            +   C SL +L + + +    +A++    K   L +L   D      + DEG+  I+ C
Sbjct: 209 QVLQKCFSLQTLNLYALSGFTDKAYM----KISLLADLRFLDICGAQNISDEGIGHIAKC 264

Query: 152 SRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCP-GLEIIN 210
           ++L SL +  C+ ITD GV  I   C+ L+ L L+   G+TD  +  ++  C   L  ++
Sbjct: 265 NKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTLD 324

Query: 211 TSYCTNITDGS 221
            + CT I   S
Sbjct: 325 VNGCTGIKRRS 335



 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 37  VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIAS 96
           ++ +G+ AI ++   L   S+     VTD  +  +V     +  L+++ C+ +TD S+  
Sbjct: 124 ISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGCKSLTDKSMQL 183

Query: 97  IANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISNCSRLS 155
           +A S   L SL +  C  +  +  + + QKC  L+ L++   +   D+    IS  + L 
Sbjct: 184 VAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAYMKISLLADLR 243

Query: 156 SLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCT 215
            L +    NI+D G+ +I   C+KL+ L+L     ITD G++ IA  C  LE ++     
Sbjct: 244 FLDICGAQNISDEGIGHIAK-CNKLESLNLTWCVRITDAGVNTIANSCTSLEFLSLFGIV 302

Query: 216 NITDGSLISLSKC--RNLKTLEIRGC 239
            +TD  L +LS+     L TL++ GC
Sbjct: 303 GVTDRCLETLSQTCSTTLTTLDVNGC 328



 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 115/246 (46%), Gaps = 9/246 (3%)

Query: 51  SLW-ELSLSKCSGVTDEALSFI-VSKHTDLRKLDITCCRMITDVSIASIANSCT----SL 104
           S+W  ++L + +   D  L+ + + ++  ++ +++   + + D  +  +   C     SL
Sbjct: 54  SIWLTINLREMTNAGDRLLAALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSL 113

Query: 105 TSLKMESCTLVPQEAFVLMGQKCHYLEELDITDN-EVDDEGLKS-ISNCSRLSSLKVGIC 162
             L +  C  +       +   C  L+   I  N  V D G+++ + NC  ++ L +  C
Sbjct: 114 EWLNLNVCQKISDNGIEAITSICPKLKVFSIYWNVRVTDAGIRNLVKNCRHITDLNLSGC 173

Query: 163 LNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSL 222
            ++TD+ +  +      L+ L++ R   ITD G+  +   C  L+ +N    +  TD + 
Sbjct: 174 KSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYALSGFTDKAY 233

Query: 223 ISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKS 282
           + +S   +L+ L+I G   ++  G+  IA  C +L  +++  C  I D+G+  +A    S
Sbjct: 234 MKISLLADLRFLDICGAQNISDEGIGHIA-KCNKLESLNLTWCVRITDAGVNTIANSCTS 292

Query: 283 LRQINL 288
           L  ++L
Sbjct: 293 LEFLSL 298


>AT1G80630.1 | Symbols:  | RNI-like superfamily protein |
           chr1:30308879-30310615 REVERSE LENGTH=578
          Length = 578

 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 15/257 (5%)

Query: 37  VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIAS 96
            T DG+  + +   SL  L+L   + ++DE +  +      L  L+++ C  +T ++  S
Sbjct: 280 FTFDGILYLLDKYQSLVHLNLKGANFLSDEMVMKLGMFFRRLTFLNLSFCSKLTGLAFFS 339

Query: 97  IANSCTSLTSLKMESCTLVPQEAF-----VLMGQKCHYLEELDITDNEVDDEGLKSIS-N 150
           I   C SL  + M       +E          G K  YL      ++ + DE L+ IS +
Sbjct: 340 IIERCVSLRCMIMVGTNFGVEEYTKDTKDFKSGVKFLYLSR----NHNLLDECLEKISRH 395

Query: 151 CSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIIN 210
           C  + SL V  C  IT  G+  +   C KL+ LD+ R TGI  LG+  +    P LE + 
Sbjct: 396 CPFIESLDVAQCPGITRDGILEVWRNCGKLRSLDISRCTGIKSLGV--VDFELPKLESLR 453

Query: 211 TSYCTNITDGSLISLS-KCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNID 269
               T I D +L  +S KCR L  L+++GCL V+S G+  +  +C +L  +++K C   D
Sbjct: 454 AC-GTWIDDEALDMISKKCRGLLHLDLQGCLNVSSRGVKEVVQSCIRLREINLKYC-EAD 511

Query: 270 DSGMIPLAYFSKSLRQI 286
                 + + + SLR+I
Sbjct: 512 KKMYTWMVFANPSLRKI 528


>AT5G51370.2 | Symbols:  | RNI-like superfamily protein |
           chr5:20872783-20874192 FORWARD LENGTH=446
          Length = 446

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 2/188 (1%)

Query: 89  ITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSI 148
           ++D+ +  +A  C SL  L++  C     +    +GQ C  LEEL I D+ +DD  + ++
Sbjct: 215 VSDIGLTFLAQGCRSLVKLELSGCE-GSFDGIKAIGQCCEVLEELSICDHRMDDGWIAAL 273

Query: 149 SNCSRLSSLKVGICLNI-TDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLE 207
           S    L  L++  C  I    G   +   C  ++ L L R       GI A+   C G  
Sbjct: 274 SYFESLKILRISSCRKIDASPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGAT 333

Query: 208 IINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYN 267
            +N   C  ++D         R ++ L + GC ++TS GL S+ ++ ++L  + +  C +
Sbjct: 334 EVNIQDCWGLSDDCFSLAKAFRRVRFLSLEGCSVLTSGGLESVILHWEELESMRVVSCKS 393

Query: 268 IDDSGMIP 275
           I DS + P
Sbjct: 394 IKDSEISP 401


>AT5G51380.1 | Symbols:  | RNI-like superfamily protein |
           chr5:20875945-20877779 FORWARD LENGTH=479
          Length = 479

 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 2/184 (1%)

Query: 89  ITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSI 148
           ++D+ +  +A  C  L  L++  C     +    +GQ C  LEEL I D+ +DD  + ++
Sbjct: 251 VSDIGLTILAQGCKRLVKLELSGCE-GSFDGIKAIGQCCEVLEELSICDHRMDDGWIAAL 309

Query: 149 SNCSRLSSLKVGICLNI-TDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLE 207
           S    L +L +  C  I +  G   +   C  L+ L L R       G+ A+   C G+ 
Sbjct: 310 SYFESLKTLLISSCRKIDSSPGPGKLLGSCPALESLQLRRCCLNDKEGMRALFKVCDGVT 369

Query: 208 IINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYN 267
            +N   C  + D S       R ++ L + GC ++T+ GL S+ ++ ++L  + +  C N
Sbjct: 370 KVNIQDCWGLDDDSFSLAKAFRRVRFLSLEGCSILTTSGLESVILHWEELESMRVVSCKN 429

Query: 268 IDDS 271
           I DS
Sbjct: 430 IKDS 433


>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
           chr1:17276103-17277659 REVERSE LENGTH=518
          Length = 518

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 8/246 (3%)

Query: 63  VTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVL 122
           + DEAL  I  +  +L++L +  CR +TDV +A+ A +C  L      SC    +    +
Sbjct: 117 IGDEALVKISLRCRNLKRLKLRACRELTDVGMAAFAENCKDLKIFSCGSCDFGAKGVKAV 176

Query: 123 MGQKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAY--IGMCCSK 179
           +   C  LEEL I       D   + I      SSLK  ICL     G  +  + +    
Sbjct: 177 LDH-CSNLEELSIKRLRGFTDIAPEMIGPGVAASSLK-SICLKELYNGQCFGPVIVGAKN 234

Query: 180 LKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGC 239
           LK L L+R +G  DL +  ++    G+  I+      ++D +L ++S C +L++L +   
Sbjct: 235 LKSLKLFRCSGDWDLLLQEMSGKDHGVVEIHLER-MQVSDVALSAISYCSSLESLHLVKT 293

Query: 240 LLVTSIGLASIAMNCKQL--ICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVG 297
              T+ GLA+IA  CK+L  + +D  K   I D G++ +A F   L+++ L   + T + 
Sbjct: 294 PECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPTTLS 353

Query: 298 LLSLAS 303
           L  LA+
Sbjct: 354 LGMLAA 359



 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 121/263 (46%), Gaps = 17/263 (6%)

Query: 35  CLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVS- 93
           C   + G++A+ +   +L ELS+ +  G TD A   I         L   C + + +   
Sbjct: 166 CDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMI-GPGVAASSLKSICLKELYNGQC 224

Query: 94  IASIANSCTSLTSLKMESCT----LVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSIS 149
              +     +L SLK+  C+    L+ QE    M  K H + E+ +   +V D  L +IS
Sbjct: 225 FGPVIVGAKNLKSLKLFRCSGDWDLLLQE----MSGKDHGVVEIHLERMQVSDVALSAIS 280

Query: 150 NCSRLSSLKVGICLNITDRGVAYIGMCCSKLKEL--DLYRSTGITDLGISAIACGCPGLE 207
            CS L SL +      T+ G+A I   C +L++L  D +++  I D G+ A+A  C  L+
Sbjct: 281 YCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQ 340

Query: 208 --IINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKC 265
             ++     T ++ G L +  KC NL+ L + GC       L+ IA  C  L  + IK C
Sbjct: 341 ELVLIGVNPTTLSLGMLAA--KCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKNC 398

Query: 266 YNIDDSGMIPLAYFSKSLRQINL 288
             I D G+  LA     L ++ +
Sbjct: 399 -PISDVGIENLANGCPGLTKVKI 420



 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 34/200 (17%)

Query: 51  SLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRM-ITDVSIASIANSCTSLTSLKM 109
           +L  L L +CSG  D  L  +  K  D   ++I   RM ++DV++++I+  C+SL SL +
Sbjct: 234 NLKSLKLFRCSGDWDLLLQEMSGK--DHGVVEIHLERMQVSDVALSAIS-YCSSLESLHL 290

Query: 110 ESCTLVPQEAFVLMGQKCHYLEELDITD---NEVDDEGLKSISN-CSRL----------S 155
                        + +KC  L +L I     N + DEGL +++  CS+L          +
Sbjct: 291 VKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLVAVAKFCSQLQELVLIGVNPT 350

Query: 156 SLKVGI----CLNIT-----------DRGVAYIGMCCSKLKELDLYRSTGITDLGISAIA 200
           +L +G+    CLN+            D  ++ I   C  L++L + ++  I+D+GI  +A
Sbjct: 351 TLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCI-KNCPISDVGIENLA 409

Query: 201 CGCPGLEIINTSYCTNITDG 220
            GCPGL  +    C  +  G
Sbjct: 410 NGCPGLTKVKIKKCKGVLGG 429


>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
           2 | chr5:26831677-26833260 REVERSE LENGTH=527
          Length = 527

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 121/258 (46%), Gaps = 23/258 (8%)

Query: 59  KCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQE 118
           K   ++DEAL+ I  +  +L ++ +  CR ITD+ +   A +C +L  L + SC    + 
Sbjct: 116 KSVSLSDEALAMISVRCLNLTRVKLRGCREITDLGMEDFAKNCKNLKKLSVGSCNFGAKG 175

Query: 119 AFVLMGQKCHYLEELDITDNEVDDEGLKSISNCSRL---------SSLKVGICLNITDRG 169
              ++ + C  LEEL +       + L+ I   + L         SSL+  ICL     G
Sbjct: 176 VNAML-EHCKLLEELSV-------KRLRGIHEAAELIHLPDDASSSSLR-SICLKELVNG 226

Query: 170 VAYIGMCCS--KLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK 227
             +  +  +   LK L + R  G  D  +  IA G   L  I+      ++D  L ++SK
Sbjct: 227 QVFEPLLATTRTLKTLKIIRCLGDWDKVLQMIANGKSSLSEIHLER-LQVSDIGLSAISK 285

Query: 228 CRNLKTLEIRGCLLVTSIGLASIAMNCKQL--ICVDIKKCYNIDDSGMIPLAYFSKSLRQ 285
           C N++TL I      ++ GL  +A  CK L  + +D  +   I D G++ +A    +L++
Sbjct: 286 CSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRIGDEGLLSVAKHCLNLQE 345

Query: 286 INLSYSSVTDVGLLSLAS 303
           + L   + T + L ++AS
Sbjct: 346 LVLIGVNATHMSLAAIAS 363


>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
           chr3:18572788-18574356 FORWARD LENGTH=522
          Length = 522

 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 114/246 (46%), Gaps = 11/246 (4%)

Query: 63  VTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVL 122
           ++DEAL  +  + ++L ++ +  CR ITD+ + S A +C SL  L   SCT    +    
Sbjct: 118 LSDEALFIVSIRCSNLIRVKLRGCREITDLGMESFARNCKSLRKLSCGSCTF-GAKGINA 176

Query: 123 MGQKCHYLEELDITDNEVDDEGLKSISNCSRLS---SLKVGICLNITDRGVAYIGMCCSK 179
           M + C  LEEL +        GL  ++   +LS   SL+      + +  V    +    
Sbjct: 177 MLEHCKVLEELSLKRI----RGLHELAEPIKLSLSASLRSVFLKELVNGQVFGSLVATRT 232

Query: 180 LKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGC 239
           LK++ + R  G  D        G   L  I       +TD  L  +SKC NL+TL I   
Sbjct: 233 LKKVKIIRCLGNWDRVFEMNGNGNSSLTEIRLER-LQVTDIGLFGISKCSNLETLHIVKT 291

Query: 240 LLVTSIGLASIAMNCKQL--ICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVG 297
              +++GLAS+   CK L  + +D  +   I D G++ +A    +L+++ L     T + 
Sbjct: 292 PDCSNLGLASVVERCKLLRKLHIDGWRVKRIGDQGLMSVAKHCLNLQELVLIGVDATYMS 351

Query: 298 LLSLAS 303
           L ++AS
Sbjct: 352 LSAIAS 357


>AT3G07550.2 | Symbols:  | RNI-like superfamily protein |
           chr3:2409946-2411133 FORWARD LENGTH=395
          Length = 395

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 13/257 (5%)

Query: 25  SMLQSIILDGCL-VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDI 83
           + L ++ LD C  ++ DG+  I +   +L  +SL +C+ ++D  L  +      L+ +++
Sbjct: 117 ARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNL 175

Query: 84  TCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDE 143
           + C +++D  I +++ +C  L S+K+ +C  +    F        Y+   D    +++ +
Sbjct: 176 SYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYV---DADSCQLEPK 232

Query: 144 GLKSISNCSRLSSLKV-GICLNITDRGVAYIGM-CCSKLKELDLYRSTGITDLGISAIAC 201
           G+  I +   +  L + G+   I   G+  IG    SKL+ L+L     + D  I AIA 
Sbjct: 233 GITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAK 292

Query: 202 GCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQLICV 260
           GCP L+  N + C  +      ++ K CRNLK L +  C  +   GL  +A+ C    C+
Sbjct: 293 GCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGL--LALRCG---CM 347

Query: 261 DIKKCYNIDDSGMIPLA 277
           +++  Y   ++ + P A
Sbjct: 348 NLQILYMNGNARLTPTA 364



 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 4/105 (3%)

Query: 206 LEIINTSYCTNITDGSLISLS-KCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKK 264
           LE ++ S CT + D SL SL      L TL +  C  ++  G+++IA  C  L  V + +
Sbjct: 93  LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYR 152

Query: 265 CYNIDDSGMIPLAYFSKSLRQINLSYSS-VTDVGLLSLASISCLQ 308
           C NI D G+  LA  S SL+ +NLSY   V+D G+ +L S +CLQ
Sbjct: 153 C-NISDIGLETLARASLSLKCVNLSYCPLVSDFGIKAL-SQACLQ 195


>AT3G07550.1 | Symbols:  | RNI-like superfamily protein |
           chr3:2409946-2411133 FORWARD LENGTH=395
          Length = 395

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 125/257 (48%), Gaps = 13/257 (5%)

Query: 25  SMLQSIILDGCL-VTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDI 83
           + L ++ LD C  ++ DG+  I +   +L  +SL +C+ ++D  L  +      L+ +++
Sbjct: 117 ARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYRCN-ISDIGLETLARASLSLKCVNL 175

Query: 84  TCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDE 143
           + C +++D  I +++ +C  L S+K+ +C  +    F        Y+   D    +++ +
Sbjct: 176 SYCPLVSDFGIKALSQACLQLESVKISNCKSITGVGFSGCSPTLGYV---DADSCQLEPK 232

Query: 144 GLKSISNCSRLSSLKV-GICLNITDRGVAYIGM-CCSKLKELDLYRSTGITDLGISAIAC 201
           G+  I +   +  L + G+   I   G+  IG    SKL+ L+L     + D  I AIA 
Sbjct: 233 GITGIISGGGIEFLNISGVSCYIRKDGLVPIGSGIASKLRILNLRMCRTVGDESIEAIAK 292

Query: 202 GCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQLICV 260
           GCP L+  N + C  +      ++ K CRNLK L +  C  +   GL  +A+ C    C+
Sbjct: 293 GCPLLQEWNLALCHEVKISGWEAVGKWCRNLKKLHVNRCRNLCDQGL--LALRCG---CM 347

Query: 261 DIKKCYNIDDSGMIPLA 277
           +++  Y   ++ + P A
Sbjct: 348 NLQILYMNGNARLTPTA 364



 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 60/105 (57%), Gaps = 4/105 (3%)

Query: 206 LEIINTSYCTNITDGSLISLS-KCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKK 264
           LE ++ S CT + D SL SL      L TL +  C  ++  G+++IA  C  L  V + +
Sbjct: 93  LEHLSLSGCTVLNDSSLDSLRYPGARLHTLYLDCCFGISDDGISTIASFCPNLSVVSLYR 152

Query: 265 CYNIDDSGMIPLAYFSKSLRQINLSYSS-VTDVGLLSLASISCLQ 308
           C NI D G+  LA  S SL+ +NLSY   V+D G+ +L S +CLQ
Sbjct: 153 C-NISDIGLETLARASLSLKCVNLSYCPLVSDFGIKAL-SQACLQ 195


>AT5G07670.1 | Symbols:  | RNI-like superfamily protein |
           chr5:2430421-2432065 FORWARD LENGTH=476
          Length = 476

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 3/189 (1%)

Query: 88  MITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKS 147
           +++D+ +  +A  C  L  L++  C     +    +G+ C  LEEL + DN+++   L  
Sbjct: 248 LVSDIGLMILAQGCKRLVKLELVGCE-GGFDGIKEIGECCQMLEELTVCDNKMESGWLGG 306

Query: 148 ISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLE 207
           +  C  L +LK+  C  I +     +  CC  L+ L L +        + A+   C    
Sbjct: 307 LRYCENLKTLKLVSCKKIDNDPDESLSCCCPALERLQLEKCQLRDKNTVKALFKMCEAAR 366

Query: 208 IINTSYCTNITDGSLISLSKC-RNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCY 266
            I    C  + D  + SL+     +K L + GC L+T+ GL S+ ++  +L  + +  C 
Sbjct: 367 EIVFQDCWGL-DNDIFSLAMAFGRVKLLYLEGCSLLTTSGLESVILHWHELEHLKVVSCK 425

Query: 267 NIDDSGMIP 275
           NI DS + P
Sbjct: 426 NIKDSEVSP 434


>AT2G39940.1 | Symbols: COI1 | RNI-like superfamily protein |
           chr2:16672848-16675486 REVERSE LENGTH=592
          Length = 592

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 35/179 (19%)

Query: 88  MITDVSIASIANSCTSLTSLKMESCT----------LVPQEAFVLMGQKCHYLEELDITD 137
           +I D  +  +A  C  L  L++E             LV Q   + + Q C  LE + +  
Sbjct: 328 VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYV 387

Query: 138 NEVDDEGLKSISNC---------------SRLSSLKVGICLNITDRGVAYIGMCCSKLKE 182
           +++ +E L+SI                   R++ L +       D GV  + + C KL+ 
Sbjct: 388 SDITNESLESIGTYLKNLCDFRLVLLDREERITDLPL-------DNGVRSLLIGCKKLRR 440

Query: 183 LDLY-RSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGC 239
              Y R  G+TDLG+S I    P +  +   Y    +D  L+  S+ C NL+ LE+RGC
Sbjct: 441 FAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGE-SDEGLMEFSRGCPNLQKLEMRGC 498


>AT1G55590.1 | Symbols:  | RNI-like superfamily protein |
           chr1:20769476-20771756 REVERSE LENGTH=607
          Length = 607

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 110/234 (47%), Gaps = 31/234 (13%)

Query: 63  VTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVL 122
           V+D   + ++    +L+K ++    +++D++   +  S  SL  +++ +C L+  EA   
Sbjct: 324 VSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKK 383

Query: 123 MGQKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLK 181
           +G  C  LE LD+     + D  L S+S   +L+SL +    ++TD G+  +G     + 
Sbjct: 384 LGL-CGNLEVLDLGSCKSISDSCLNSVSALRKLTSLNLAGA-DVTDSGMLALGKSDVPIT 441

Query: 182 ELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLL 241
           +L L     ++D GIS               Y  N  +G++      + L TL++     
Sbjct: 442 QLSLRGCRRVSDRGIS---------------YLLN-NEGTI-----SKTLSTLDLGHMPG 480

Query: 242 VTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYF-------SKSLRQINL 288
           ++   + +I   CK L  + I+ C+++ DS +  LA +       SK LR++N+
Sbjct: 481 ISDRAIHTITHCCKALTELSIRSCFHVTDSSIESLATWERQAEGGSKQLRKLNV 534



 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 49/200 (24%)

Query: 131 EELDITDNEVDDEGLKSISNCSRLSSLK-VGICLNITDRGVAYIGMCCSKLKELDLYRST 189
           E+    DN++   GL+++  C +L+SL  V  C N                +++   R  
Sbjct: 256 EKEPFPDNDLTYTGLQALGFCQQLTSLSLVRTCYN----------------RKISFKR-- 297

Query: 190 GITDLGISAIACGCPGLEIINTSYCTNITDGSLIS-LSKCRNLKTLEIRG---------- 238
            I D+GI  ++  C GLE +       ++D    S L  CRNLK  E+RG          
Sbjct: 298 -INDMGIFLLSEACKGLESVRLGGFPKVSDAGFASLLHSCRNLKKFEVRGAFLLSDLAFH 356

Query: 239 ----------------CLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKS 282
                           C L+TS  +  + + C  L  +D+  C +I DS +  ++   K 
Sbjct: 357 DVTGSSCSLQEVRLSTCPLITSEAVKKLGL-CGNLEVLDLGSCKSISDSCLNSVSALRK- 414

Query: 283 LRQINLSYSSVTDVGLLSLA 302
           L  +NL+ + VTD G+L+L 
Sbjct: 415 LTSLNLAGADVTDSGMLALG 434



 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 16/190 (8%)

Query: 51  SLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKME 110
           SL E+ LS C  +T EA+  +     +L  LD+  C+ I+D  + S++ +   LTSL + 
Sbjct: 364 SLQEVRLSTCPLITSEAVKKL-GLCGNLEVLDLGSCKSISDSCLNSVS-ALRKLTSLNLA 421

Query: 111 SCTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISN-----CSRLSSLKVGICLN 164
               V     + +G+    + +L +     V D G+  + N        LS+L +G    
Sbjct: 422 GAD-VTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTISKTLSTLDLGHMPG 480

Query: 165 ITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIAC-------GCPGLEIINTSYCTNI 217
           I+DR +  I  CC  L EL +     +TD  I ++A        G   L  +N   C ++
Sbjct: 481 ISDRAIHTITHCCKALTELSIRSCFHVTDSSIESLATWERQAEGGSKQLRKLNVHNCVSL 540

Query: 218 TDGSLISLSK 227
           T G+L  LSK
Sbjct: 541 TTGALRWLSK 550



 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 19  NGLSKLSMLQSIILDGCLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDL 78
           N +S L  L S+ L G  VT  G+ A+G   + + +LSL  C  V+D  +S++++    +
Sbjct: 407 NSVSALRKLTSLNLAGADVTDSGMLALGKSDVPITQLSLRGCRRVSDRGISYLLNNEGTI 466

Query: 79  RK----LDITCCRMITDVSIASIANSCTSLTSLKMESC 112
            K    LD+     I+D +I +I + C +LT L + SC
Sbjct: 467 SKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIRSC 504


>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
           chr4:4197847-4199511 REVERSE LENGTH=554
          Length = 554

 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 7/246 (2%)

Query: 62  GVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFV 121
           G+ D A   I  +  +L +L +  C  I+D+ I     +C SL  +   SC    +    
Sbjct: 150 GICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIGFTENCRSLKKVSFGSCGFGVKGMNA 209

Query: 122 LMGQKCHYLEELDITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMC--CSK 179
           L+   C  LEEL +        G + I       SLKV ICL     G  +  +      
Sbjct: 210 LL-NTCLGLEELSVKRLRGIGAGAELIGPGGAAGSLKV-ICLKELHNGQCFAPLLSGAKG 267

Query: 180 LKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGC 239
           L+ L ++R +G  D    A+      +  I+      ++D  L +LSKC  ++ L +   
Sbjct: 268 LRILKIFRCSGDWDRVFEAVRDKVNAIVEIHLER-IQMSDLGLTALSKCSGVEVLHLVKT 326

Query: 240 LLVTSIGLASIAMNCKQL--ICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVG 297
              T++GLA +A  CK L  + +D  K   I D G+I +A +  +L+++ L   + T + 
Sbjct: 327 PDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDEGLIVVAKYCWNLQELVLIGVNPTKLS 386

Query: 298 LLSLAS 303
           L ++ S
Sbjct: 387 LEAIVS 392


>AT1G80570.2 | Symbols:  | RNI-like superfamily protein |
           chr1:30290661-30292231 FORWARD LENGTH=480
          Length = 480

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 37/223 (16%)

Query: 115 VPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYI 173
           V  +  +++   CH L +L ++    + D G+  +S+C  LSSLK+     IT  GV  +
Sbjct: 97  VDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSL 156

Query: 174 GMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLS------- 226
            + C KL+ L L R   +  +           LE +    C  I +G LI L        
Sbjct: 157 AVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLT 216

Query: 227 -----------------------------KCRNLKTLEIRGCLLVTSIGLASIAMNCKQL 257
                                         C +L  L +  C++    GLA +  NCK L
Sbjct: 217 SLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNL 276

Query: 258 ICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLS 300
             + +  C  + DS +I L   +  LR I+L   S   + LL+
Sbjct: 277 EKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLN 319



 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)

Query: 51  SLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKME 110
           SL ELSL  C       L+ ++    +L KL +  C  ++D  I ++    + L S+ + 
Sbjct: 249 SLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLR 308

Query: 111 SCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSIS-NCSRLSSLKVGIC------- 162
               VP +           L  L+     + DE L +I+ +CS+L S K+          
Sbjct: 309 ----VPSD---------FTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSL 355

Query: 163 LNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSL 222
            + T +G+  +   C  ++EL L       D+G+ A+ C    LEI+   +C  ++D  L
Sbjct: 356 FSFTLQGIITLIQKCP-VRELSLDHVCVFNDMGMEAL-CSAQKLEILELVHCQEVSDEGL 413

Query: 223 ISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGM 273
           I +S+  +L  L++  CL VT  G+  +  + K  + V ++ C  +   G+
Sbjct: 414 ILVSQFPSLNVLKLSKCLGVTDDGMRPLVGSHKLELLV-VEDCPQVSRRGV 463


>AT1G80570.1 | Symbols:  | RNI-like superfamily protein |
           chr1:30290828-30292231 FORWARD LENGTH=467
          Length = 467

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 37/223 (16%)

Query: 115 VPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYI 173
           V  +  +++   CH L +L ++    + D G+  +S+C  LSSLK+     IT  GV  +
Sbjct: 84  VDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSL 143

Query: 174 GMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLS------- 226
            + C KL+ L L R   +  +           LE +    C  I +G LI L        
Sbjct: 144 AVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLT 203

Query: 227 -----------------------------KCRNLKTLEIRGCLLVTSIGLASIAMNCKQL 257
                                         C +L  L +  C++    GLA +  NCK L
Sbjct: 204 SLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNL 263

Query: 258 ICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLS 300
             + +  C  + DS +I L   +  LR I+L   S   + LL+
Sbjct: 264 EKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLN 306



 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)

Query: 51  SLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKME 110
           SL ELSL  C       L+ ++    +L KL +  C  ++D  I ++    + L S+ + 
Sbjct: 236 SLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLR 295

Query: 111 SCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSIS-NCSRLSSLKVGIC------- 162
               VP +           L  L+     + DE L +I+ +CS+L S K+          
Sbjct: 296 ----VPSD---------FTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSL 342

Query: 163 LNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSL 222
            + T +G+  +   C  ++EL L       D+G+ A+ C    LEI+   +C  ++D  L
Sbjct: 343 FSFTLQGIITLIQKCP-VRELSLDHVCVFNDMGMEAL-CSAQKLEILELVHCQEVSDEGL 400

Query: 223 ISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGM 273
           I +S+  +L  L++  CL VT  G+  +  + K  + V ++ C  +   G+
Sbjct: 401 ILVSQFPSLNVLKLSKCLGVTDDGMRPLVGSHKLELLV-VEDCPQVSRRGV 450


>AT1G80570.3 | Symbols:  | RNI-like superfamily protein |
           chr1:30290828-30292231 FORWARD LENGTH=467
          Length = 467

 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 37/223 (16%)

Query: 115 VPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYI 173
           V  +  +++   CH L +L ++    + D G+  +S+C  LSSLK+     IT  GV  +
Sbjct: 84  VDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCPELSSLKLNFAPRITGCGVLSL 143

Query: 174 GMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLS------- 226
            + C KL+ L L R   +  +           LE +    C  I +G LI L        
Sbjct: 144 AVGCKKLRRLHLIRCLNVASVEWLEYFGKLETLEELCIKNCRAIGEGDLIKLRNSWRKLT 203

Query: 227 -----------------------------KCRNLKTLEIRGCLLVTSIGLASIAMNCKQL 257
                                         C +L  L +  C++    GLA +  NCK L
Sbjct: 204 SLQFEVDANYRYMKVYDQLDVERWPKQLVPCDSLVELSLGNCIIAPGRGLACVLRNCKNL 263

Query: 258 ICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLS 300
             + +  C  + DS +I L   +  LR I+L   S   + LL+
Sbjct: 264 EKLHLDMCTGVSDSDIIALVQKASHLRSISLRVPSDFTLPLLN 306



 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 104/231 (45%), Gaps = 24/231 (10%)

Query: 51  SLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKME 110
           SL ELSL  C       L+ ++    +L KL +  C  ++D  I ++    + L S+ + 
Sbjct: 236 SLVELSLGNCIIAPGRGLACVLRNCKNLEKLHLDMCTGVSDSDIIALVQKASHLRSISLR 295

Query: 111 SCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSIS-NCSRLSSLKVGIC------- 162
               VP +           L  L+     + DE L +I+ +CS+L S K+          
Sbjct: 296 ----VPSD---------FTLPLLNNITLRLTDESLSAIAQHCSKLESFKISFSDGEFPSL 342

Query: 163 LNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSL 222
            + T +G+  +   C  ++EL L       D+G+ A+ C    LEI+   +C  ++D  L
Sbjct: 343 FSFTLQGIITLIQKCP-VRELSLDHVCVFNDMGMEAL-CSAQKLEILELVHCQEVSDEGL 400

Query: 223 ISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGM 273
           I +S+  +L  L++  CL VT  G+  +  + K  + V ++ C  +   G+
Sbjct: 401 ILVSQFPSLNVLKLSKCLGVTDDGMRPLVGSHKLELLV-VEDCPQVSRRGV 450


>AT1G15740.1 | Symbols:  | Leucine-rich repeat family protein |
           chr1:5411509-5414544 FORWARD LENGTH=585
          Length = 585

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 91/171 (53%), Gaps = 7/171 (4%)

Query: 143 EGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACG 202
           + L++  +C+ +  L +G    + D  +  I    + L  +D +  + ITD G+ ++  G
Sbjct: 104 KSLEAFRDCA-IQDLYLGEYPGVNDDWMDVISSQSTSLLSVD-FSGSDITDSGLVSLK-G 160

Query: 203 CPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDI 262
           C  LE +N ++C  I++  L+ LS   NL +L  R    +T+ G+ +++ N   L  +D+
Sbjct: 161 CTNLESLNFNFCDQISNRGLVHLSGLSNLTSLSFRRNAAITAQGMRALS-NLVNLKKLDL 219

Query: 263 KKCYNIDDSGMIPLAYFSKSLRQINLSY-SSVTDVGLLSLASISCLQSFTI 312
           +KC  I D G++ L   +K L  +N+ + + +TD  +  L+ ++ L+S  I
Sbjct: 220 EKCPGI-DGGLVHLRALTK-LESLNIKWCNCITDADMEPLSVLTNLRSLQI 268



 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 55/229 (24%)

Query: 133 LDITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGIT 192
           +D + +++ D GL S+  C+ L SL    C  I++RG+ ++    S L  L   R+  IT
Sbjct: 143 VDFSGSDITDSGLVSLKGCTNLESLNFNFCDQISNRGLVHLS-GLSNLTSLSFRRNAAIT 201

Query: 193 DLGISAIAC----------GCPG-------------LEIINTSYCTNITDGSLISLSKCR 229
             G+ A++            CPG             LE +N  +C  ITD  +  LS   
Sbjct: 202 AQGMRALSNLVNLKKLDLEKCPGIDGGLVHLRALTKLESLNIKWCNCITDADMEPLSVLT 261

Query: 230 NLKTLEI------------------------RGCLLVTSIGLASIAMNCKQLICVDIKKC 265
           NL++L+I                         GC  VT+  L ++      L+ +++ +C
Sbjct: 262 NLRSLQICCSKITDIGISYLKGLNKLNLLNLEGCRHVTAACLDTLTA-LAGLMYLNLNRC 320

Query: 266 YNIDDSGMIPLAYFSK--SLRQINLSYSSVTDVGLLSLASISCLQSFTI 312
            N  DSG      FS   +L+ +NL  +++T+  L+ L  ++ L+S  +
Sbjct: 321 -NFSDSGC---EKFSDLINLKILNLGMNNITNSCLVHLKGLTKLESLNL 365


>AT5G40470.1 | Symbols:  | RNI-like superfamily protein |
           chr5:16208255-16209745 REVERSE LENGTH=496
          Length = 496

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 33/212 (15%)

Query: 77  DLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCH-YLEELDI 135
           +L ++++  CR I DV +  ++  C SL SL +            +   +C+  LE LD+
Sbjct: 250 NLEEIELRTCRSIVDVVLLKVSEICESLKSLLIHDGGSKDGLVQFMSNARCYDTLERLDL 309

Query: 136 --TDNEVDDEGLKSISNCSRLSSLKVGICLNIT--------------------------- 166
               +  DD  +   +N   LS+L++  C+ +T                           
Sbjct: 310 RLPMDLTDDHLVSLAANFKCLSTLRLTSCIFVTGFSLKALALSFSSSLEELSLLSCNAIE 369

Query: 167 -DRGV-AYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLIS 224
            +RG+ A IG    +L++LDL R+  + D  + ++   C GL  +    C ++T   L++
Sbjct: 370 RERGLLATIGQHLGRLRKLDLTRNEWLFDKEVVSMLASCNGLVEVVLRDCKHLTGAVLVA 429

Query: 225 LSK-CRNLKTLEIRGCLLVTSIGLASIAMNCK 255
           L+K C  LKTL+I GC L+    +    M  +
Sbjct: 430 LNKNCVKLKTLDILGCRLIEPDDVEGFVMKTQ 461


>AT5G21900.1 | Symbols:  | RNI-like superfamily protein |
           chr5:7238239-7240338 FORWARD LENGTH=544
          Length = 544

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 8/184 (4%)

Query: 16  ALANGLSKLSMLQSIILDGCLVTSDGL-RAIGNLRIS-LWELSLSKCSGVTDEALSFIVS 73
             ++ L K   L  + + G +  +DG+ R+    R S L +LSL+ C+ VTDE +  I  
Sbjct: 326 GFSSSLYKFEKLNYLSVAGLVSVNDGVVRSFFMFRSSILTDLSLANCNEVTDECMWHIGR 385

Query: 74  KHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEEL 133
               L  LDIT    +TD S+  I   C  L SLK+ S     +     +      L EL
Sbjct: 386 YCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTSNRFSDECIAAFLEVSGGSLREL 445

Query: 134 DITDNEVDDEGLKSISN----CSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRST 189
            +  N+V D G ++  +    C  L  L +  C  + +  +  I  CCS L+ L L+  T
Sbjct: 446 CL--NKVRDVGPETAFSLAKVCKMLQFLDLSWCRRLKEDDLRRILRCCSSLQSLKLFGWT 503

Query: 190 GITD 193
            + D
Sbjct: 504 QVED 507


>AT2G17020.1 | Symbols:  | F-box/RNI-like superfamily protein |
           chr2:7396559-7398787 REVERSE LENGTH=656
          Length = 656

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 7/208 (3%)

Query: 27  LQSIILDG-CLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITC 85
           +++I L G C VT  G + I +   SL + S+     +TD     I++    L  + +  
Sbjct: 328 METICLGGFCRVTDAGFKTILHSCASLSKFSIYHGPKLTDLVFHDILATTLSLSHVSLRR 387

Query: 86  CRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGL 145
           C ++TD +I  +A+S   L +L +  C  +  E    +      L+ L +   ++ D GL
Sbjct: 388 CHLLTDHAIQKLASSL-KLENLDLRGCRNLRDETLTAVSH-LPKLKVLLLDGADISDTGL 445

Query: 146 KSISN--CSRLSSLKVGICLNITDRGVAYIGMCCSK--LKELDLYRSTGITDLGISAIAC 201
             +       L SL V  C N+TD+ ++ +    SK  L+ELDL     +TD  I A+A 
Sbjct: 446 SYLKEGVLDSLVSLSVRGCRNLTDKFMSTLFDGSSKLALRELDLSNLPNLTDAAIFALAK 505

Query: 202 GCPGLEIINTSYCTNITDGSLISLSKCR 229
               +  +    C  I D S+++L+  R
Sbjct: 506 SGAPITKLQLRECRLIGDASVMALASTR 533


>AT4G30640.1 | Symbols:  | RNI-like superfamily protein |
           chr4:14952670-14953682 FORWARD LENGTH=301
          Length = 301

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 12/163 (7%)

Query: 142 DEGLKSISNCSR--LSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAI 199
           D  L+S+ + S   L+ +++  C   T+R ++Y    C  L+ L +     +TD  +  I
Sbjct: 89  DSFLRSVVDRSEGGLTEIRIRHC---TERSLSYAAERCPNLEVLWIKNCPNVTDASMEKI 145

Query: 200 ACGCPGLEIINTSYCTNITDGSLISLSK-CRNLKTLEIRGCLLVTSIGLASIAMNCKQLI 258
           A  CP L  ++ SY   IT  SLI+L + C+NLK L+ R  L      L +I      L 
Sbjct: 146 AMNCPNLRELDISYSYGITHESLITLGRSCQNLKILK-RNLLPRLGPSLPTIVAPLDYL- 203

Query: 259 CVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLSL 301
                +  NI+      +  +   L+ + + YS++T  GL S+
Sbjct: 204 -ATFPRYGNIEARI---IGKYMTQLKHLEIRYSTLTARGLDSV 242


>AT4G03190.1 | Symbols: GRH1, ATGRH1, AFB1 | GRR1-like protein 1 |
           chr4:1405108-1407057 REVERSE LENGTH=585
          Length = 585

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 108/268 (40%), Gaps = 52/268 (19%)

Query: 63  VTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVL 122
           VTDE L  I +   D + L +T C   +   IA+IA +C +L  L++  C +       L
Sbjct: 113 VTDECLEKIAASFKDFKVLVLTSCEGFSTDGIAAIAATCRNLRVLELRECIVED-----L 167

Query: 123 MGQKCHYLEE-------LDIT--DNEVDDEGLKS-ISNCSRLSSLKVGICLNITDRGVAY 172
            G    Y  E       LD +  D+EV    L+  +S    L SLK+   + +   G+  
Sbjct: 168 GGDWLSYFPESSTSLVSLDFSCLDSEVKISDLERLVSRSPNLKSLKLNPAVTLD--GLVS 225

Query: 173 IGMCCSKLKEL-------------------------DLYRSTGITDL---GISAIACGCP 204
           +  C  +L EL                          L   +G+ D+    + A+   CP
Sbjct: 226 LLRCAPQLTELGTGSFAAQLKPEAFSKLSEAFSNCKQLQSLSGLWDVLPEYLPALYSVCP 285

Query: 205 GLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKK 264
           GL  +N SY T      +  L +C  L+ L +    L+   GL ++A  CK+L  + +  
Sbjct: 286 GLTSLNLSYATVRMPDLVELLRRCSKLQKLWVMD--LIEDKGLEAVASYCKELRELRVFP 343

Query: 265 CYNIDDSGMIPLA-----YFSKSLRQIN 287
                D+  IPL      + SK  R++ 
Sbjct: 344 SEPDLDATNIPLTEQGLVFVSKGCRKLE 371


>AT2G44900.1 | Symbols: ARABIDILLO-1, ARABIDILLO1 | ARABIDILLO-1 |
           chr2:18511719-18515762 REVERSE LENGTH=930
          Length = 930

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 20/155 (12%)

Query: 54  ELSLSKCSGVTDEALSFIVSKHTDLRKLDITC--CRMITDVSIASIANSCTSLTSLKMES 111
           E+S   C  +TD  LS IV++H  L  L +    C  IT  +I ++A  C  L  L++  
Sbjct: 136 EVSGDYCKKITDATLSMIVARHEALESLQLGPDFCERITSDAIKAVAFCCPKLKKLRLSG 195

Query: 112 CTLVPQEAFVLMGQKCHYLEELDITD-NEVDDEGLKSISNCSRL-----SSLKVGICLNI 165
              V  EA   + + C  L +L   D   +D+E L  + +   L     S++K  I  N 
Sbjct: 196 IRDVTSEAIEALAKHCPQLNDLGFLDCLNIDEEALGKVVSVRYLSVAGTSNIKWSIASNN 255

Query: 166 TDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIA 200
            D+          KL  LD+ R    TD+G +A++
Sbjct: 256 WDK--------LPKLTGLDVSR----TDIGPTAVS 278


>AT5G57900.1 | Symbols: SKIP1 | SKP1 interacting partner 1 |
           chr5:23449916-23450915 REVERSE LENGTH=300
          Length = 300

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 8/173 (4%)

Query: 64  TDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLM 123
           +D ALS+   +  +L+ L I     +TD S+  IA  C SL  L +  C  +  +  V++
Sbjct: 100 SDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVMI 159

Query: 124 GQKCHYLEELDITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKEL 183
           G+ C     L I    + D   + I +   + +  +  C    D     IG     L+ L
Sbjct: 160 GRNC---PNLRILKRNLMDWSSRHIGS---VPTEYLDACPQDGDTEADAIGKHMINLEHL 213

Query: 184 DLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLIS-LSKCRNLKTLE 235
           ++  S  ++  G+++I  GCP LE ++   C +++   + S +S+ + LK ++
Sbjct: 214 EIQFSR-LSVKGLASICEGCPKLEYLDLFGCVHLSSRDITSNVSRLKWLKEVK 265


>AT4G05497.1 | Symbols:  | RNI-like superfamily protein |
           chr4:2777903-2778801 REVERSE LENGTH=246
          Length = 246

 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 5/142 (3%)

Query: 81  LDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDIT-DNE 139
           L+I    ++    +  IA+  ++L  L +  C  V     V    K   LEELDIT  + 
Sbjct: 99  LEINIDYLVNTSFLNYIADRSSNLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSS 158

Query: 140 VDDEGLKSI-SNCSRLSSLKVGICLNIT--DRGVAYIGMCCSKLKELDLYRSTGITDLGI 196
           + ++ LK +  +C  L +LK+    ++   D+    I      L+ L L+R+ G+++ G+
Sbjct: 159 IREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAIAETMPGLRHLQLFRN-GLSETGL 217

Query: 197 SAIACGCPGLEIINTSYCTNIT 218
           +AI  GCP L+ +    C NI 
Sbjct: 218 NAILEGCPHLKNLGLHQCLNIN 239


>AT5G51370.1 | Symbols:  | RNI-like superfamily protein |
           chr5:20872783-20873850 FORWARD LENGTH=355
          Length = 355

 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 2/132 (1%)

Query: 89  ITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLMGQKCHYLEELDITDNEVDDEGLKSI 148
           ++D+ +  +A  C SL  L++  C     +    +GQ C  LEEL I D+ +DD  + ++
Sbjct: 215 VSDIGLTFLAQGCRSLVKLELSGCE-GSFDGIKAIGQCCEVLEELSICDHRMDDGWIAAL 273

Query: 149 SNCSRLSSLKVGICLNI-TDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLE 207
           S    L  L++  C  I    G   +   C  ++ L L R       GI A+   C G  
Sbjct: 274 SYFESLKILRISSCRKIDASPGPEKLLRSCPAMESLQLKRCCLNDKEGIKALFKVCDGAT 333

Query: 208 IINTSYCTNITD 219
            +N   C  ++D
Sbjct: 334 EVNIQDCWGLSD 345