Miyakogusa Predicted Gene

Lj3g3v1378150.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1378150.1 Non Chatacterized Hit- tr|I3SGF1|I3SGF1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.76,0,DUF4339,Domain of unknown function DUF4339; seg,NULL;
coiled-coil,NULL,CUFF.42501.1
         (518 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G01590.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   636   0.0  

>AT5G01590.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast,
           chloroplast envelope; EXPRESSED IN: 22 plant structures;
           EXPRESSED DURING: 13 growth stages; Has 60 Blast hits to
           59 proteins in 31 species: Archae - 0; Bacteria - 20;
           Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other
           Eukaryotes - 4 (source: NCBI BLink). |
           chr5:224249-226620 FORWARD LENGTH=527
          Length = 527

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 293/449 (65%), Positives = 364/449 (81%), Gaps = 3/449 (0%)

Query: 38  HSPNFAAINL---FRRNPKKKPDNDNEPGPYTRMAHQFFWECENLPDHRHTPEVEKILND 94
            SPNFA+I L    +++PK +    +EPGPY ++A QF WECEN+PD+RHTPEV+K+LN+
Sbjct: 37  QSPNFASIGLPKFSKKSPKPETAGTDEPGPYKQIAEQFLWECENIPDYRHTPEVDKLLNE 96

Query: 95  DPVFXXXXXXXXXXXXXXXXXXXXXXSSPVMQFLVRAEEIADXXXXXXXXXXXXPYHKED 154
           DPVF                      +SPV+QF+ RAEEIAD            PY KED
Sbjct: 97  DPVFEKKENPSTEEIEAEQKWWESFRASPVVQFMTRAEEIADDMNKMELEDNDTPYRKED 156

Query: 155 RELWKALPNVIGLDGRPMPRKALKTRQEAHDKFWDFARQFFFGLWGFRQRPYPPCKPNDA 214
           ++ W+A+P+V G DGRPMPRKA+K+++E+ DKFWDF +QF FGLWGFRQRPYPP +P D 
Sbjct: 157 KDYWRAIPHVPGFDGRPMPRKAIKSKEESDDKFWDFMKQFLFGLWGFRQRPYPPGRPIDV 216

Query: 215 AQAIGYKNLEKRYYDFIMRSGGFYYKDRLGRTRGPCELIQLKTAWGAGIIDKNTFIWGED 274
           AQAIGYK LEKRYYDFIM++GG++YKDRLGR+RGPCE+I LKTA+GAGIID++TFIWGED
Sbjct: 217 AQAIGYKRLEKRYYDFIMKTGGWWYKDRLGRSRGPCEIITLKTAYGAGIIDRDTFIWGED 276

Query: 275 MDEWAPIHMIYGMERAVATWEVRFAASATAFLHKLQRGIPPWVPLKGFEEKTYEQLQEEA 334
           MDEWAPIHM+YG+E A+ATWEVR  A+ATAFLHKLQ+GIPPWVPLKG E KTY+QLQ+EA
Sbjct: 277 MDEWAPIHMVYGLEPAIATWEVRLGAAATAFLHKLQKGIPPWVPLKGREPKTYKQLQKEA 336

Query: 335 IESKRRDLAVLEANDGVWPGVRIPSHALFLWASGSELTTILEQDHMPNKYIPKDMRRKLA 394
           IESK+RD+AVLEAN GVWPGVR PSHALFLWASGSELTT+LE DHMPNK+IPK +R +LA
Sbjct: 337 IESKKRDMAVLEANGGVWPGVRTPSHALFLWASGSELTTVLESDHMPNKFIPKQLRLELA 396

Query: 395 DLIPGLRPWEVLSIEQAMDRITFNGEWYREPLGSFSTGPPYIRHWNNDVMRTFKLFEDLN 454
            +IPGLRPWEV+SIEQAMD+I++ GEWYREPLG+++TGPPYIR WN  VMR F++F +L+
Sbjct: 397 KVIPGLRPWEVISIEQAMDQISYGGEWYREPLGTYTTGPPYIREWNRSVMRLFRIFYNLS 456

Query: 455 NELYEKMEKTLPGFDKIVNKIQHDFYTRI 483
             + +K+E+T+PGFD I++K+Q D+  RI
Sbjct: 457 VRVGQKLERTVPGFDTIMDKVQKDYDKRI 485