Miyakogusa Predicted Gene

Lj3g3v1365900.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1365900.1 Non Chatacterized Hit- tr|K4CPZ2|K4CPZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,31.78,9e-17,seg,NULL; DUF688,Protein of unknown function
DUF688,CUFF.42484.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G51760.3 | Symbols:  | Protein of unknown function (DUF688) |...   102   2e-22
AT3G51760.4 | Symbols:  | Protein of unknown function (DUF688) |...   102   2e-22
AT3G51760.2 | Symbols:  | Protein of unknown function (DUF688) |...   102   3e-22
AT3G51760.1 | Symbols:  | Protein of unknown function (DUF688) |...   102   3e-22

>AT3G51760.3 | Symbols:  | Protein of unknown function (DUF688) |
           chr3:19198541-19199378 REVERSE LENGTH=250
          Length = 250

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 33/258 (12%)

Query: 1   MDFKRPRKLNLNAPLLSTRRLGAVVADTSYSSSSLPTVQNTSDRVPFSWEKAPGKPKDME 60
           MD  R R+LN NAP LST+R          +   LP  Q     VPF WE APG PK+  
Sbjct: 2   MDINRSRRLNFNAPFLSTKR--------HVTQEKLPG-QFPEASVPFCWETAPGMPKNSS 52

Query: 61  RSDSNQDGGTPRPRLPPGHQFPPKEAPEDDLD--SGDLAFHEKXXXXXXXXXXXXXXXXX 118
              ++ +  TPR +LPPG          DDLD  S  L   +                  
Sbjct: 53  HLKNDAESETPRLKLPPGRLKVQVTGKNDDLDDASESLTPAKLLHMKKRNNQEYFHQTNQ 112

Query: 119 XXXXVLSLSEALDIVQKKSEHIAQNENHKG---------LKLKLAESNGYQSPTYMINRF 169
               VLSL++A+D+V+   + ++++++ +          L ++  E +   SP+Y+I RF
Sbjct: 113 DAVDVLSLTQAIDMVELPKDSVSESDDDRSSVGGDSNGYLTMESTERSEDMSPSYIIERF 172

Query: 170 LPDATALAASSALHFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFP 229
           LPDA ALAA ++           S R      YLS      ++     SPK CGL +L P
Sbjct: 173 LPDAAALAAVTS---------AASQRRKKKLSYLSG----ETVRQSCFSPKACGLHVLLP 219

Query: 230 WRMKHKLCAMESPVLPCS 247
           W  KH++C +++   P S
Sbjct: 220 WSTKHRICGVKNAFSPSS 237


>AT3G51760.4 | Symbols:  | Protein of unknown function (DUF688) |
           chr3:19198541-19199378 REVERSE LENGTH=250
          Length = 250

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 33/258 (12%)

Query: 1   MDFKRPRKLNLNAPLLSTRRLGAVVADTSYSSSSLPTVQNTSDRVPFSWEKAPGKPKDME 60
           MD  R R+LN NAP LST+R          +   LP  Q     VPF WE APG PK+  
Sbjct: 2   MDINRSRRLNFNAPFLSTKR--------HVTQEKLPG-QFPEASVPFCWETAPGMPKNSS 52

Query: 61  RSDSNQDGGTPRPRLPPGHQFPPKEAPEDDLD--SGDLAFHEKXXXXXXXXXXXXXXXXX 118
              ++ +  TPR +LPPG          DDLD  S  L   +                  
Sbjct: 53  HLKNDAESETPRLKLPPGRLKVQVTGKNDDLDDASESLTPAKLLHMKKRNNQEYFHQTNQ 112

Query: 119 XXXXVLSLSEALDIVQKKSEHIAQNENHKG---------LKLKLAESNGYQSPTYMINRF 169
               VLSL++A+D+V+   + ++++++ +          L ++  E +   SP+Y+I RF
Sbjct: 113 DAVDVLSLTQAIDMVELPKDSVSESDDDRSSVGGDSNGYLTMESTERSEDMSPSYIIERF 172

Query: 170 LPDATALAASSALHFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFP 229
           LPDA ALAA ++           S R      YLS      ++     SPK CGL +L P
Sbjct: 173 LPDAAALAAVTS---------AASQRRKKKLSYLSG----ETVRQSCFSPKACGLHVLLP 219

Query: 230 WRMKHKLCAMESPVLPCS 247
           W  KH++C +++   P S
Sbjct: 220 WSTKHRICGVKNAFSPSS 237


>AT3G51760.2 | Symbols:  | Protein of unknown function (DUF688) |
           chr3:19198541-19199405 REVERSE LENGTH=259
          Length = 259

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 33/258 (12%)

Query: 1   MDFKRPRKLNLNAPLLSTRRLGAVVADTSYSSSSLPTVQNTSDRVPFSWEKAPGKPKDME 60
           MD  R R+LN NAP LST+R          +   LP  Q     VPF WE APG PK+  
Sbjct: 11  MDINRSRRLNFNAPFLSTKR--------HVTQEKLPG-QFPEASVPFCWETAPGMPKNSS 61

Query: 61  RSDSNQDGGTPRPRLPPGHQFPPKEAPEDDLD--SGDLAFHEKXXXXXXXXXXXXXXXXX 118
              ++ +  TPR +LPPG          DDLD  S  L   +                  
Sbjct: 62  HLKNDAESETPRLKLPPGRLKVQVTGKNDDLDDASESLTPAKLLHMKKRNNQEYFHQTNQ 121

Query: 119 XXXXVLSLSEALDIVQKKSEHIAQNENHKG---------LKLKLAESNGYQSPTYMINRF 169
               VLSL++A+D+V+   + ++++++ +          L ++  E +   SP+Y+I RF
Sbjct: 122 DAVDVLSLTQAIDMVELPKDSVSESDDDRSSVGGDSNGYLTMESTERSEDMSPSYIIERF 181

Query: 170 LPDATALAASSALHFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFP 229
           LPDA ALAA ++           S R      YLS      ++     SPK CGL +L P
Sbjct: 182 LPDAAALAAVTS---------AASQRRKKKLSYLSG----ETVRQSCFSPKACGLHVLLP 228

Query: 230 WRMKHKLCAMESPVLPCS 247
           W  KH++C +++   P S
Sbjct: 229 WSTKHRICGVKNAFSPSS 246


>AT3G51760.1 | Symbols:  | Protein of unknown function (DUF688) |
           chr3:19198541-19199405 REVERSE LENGTH=259
          Length = 259

 Score =  102 bits (254), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 118/258 (45%), Gaps = 33/258 (12%)

Query: 1   MDFKRPRKLNLNAPLLSTRRLGAVVADTSYSSSSLPTVQNTSDRVPFSWEKAPGKPKDME 60
           MD  R R+LN NAP LST+R          +   LP  Q     VPF WE APG PK+  
Sbjct: 11  MDINRSRRLNFNAPFLSTKR--------HVTQEKLPG-QFPEASVPFCWETAPGMPKNSS 61

Query: 61  RSDSNQDGGTPRPRLPPGHQFPPKEAPEDDLD--SGDLAFHEKXXXXXXXXXXXXXXXXX 118
              ++ +  TPR +LPPG          DDLD  S  L   +                  
Sbjct: 62  HLKNDAESETPRLKLPPGRLKVQVTGKNDDLDDASESLTPAKLLHMKKRNNQEYFHQTNQ 121

Query: 119 XXXXVLSLSEALDIVQKKSEHIAQNENHKG---------LKLKLAESNGYQSPTYMINRF 169
               VLSL++A+D+V+   + ++++++ +          L ++  E +   SP+Y+I RF
Sbjct: 122 DAVDVLSLTQAIDMVELPKDSVSESDDDRSSVGGDSNGYLTMESTERSEDMSPSYIIERF 181

Query: 170 LPDATALAASSALHFTSNVEEKESDRCSYSQCYLSSSARHNSINSYASSPKGCGLELLFP 229
           LPDA ALAA ++           S R      YLS      ++     SPK CGL +L P
Sbjct: 182 LPDAAALAAVTS---------AASQRRKKKLSYLSG----ETVRQSCFSPKACGLHVLLP 228

Query: 230 WRMKHKLCAMESPVLPCS 247
           W  KH++C +++   P S
Sbjct: 229 WSTKHRICGVKNAFSPSS 246