Miyakogusa Predicted Gene

Lj3g3v1340540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1340540.1 Non Chatacterized Hit- tr|I1LU79|I1LU79_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.36,0,seg,NULL;
Cyclin,Cyclin PHO80-like; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL; Cyclin-like,Cycl,CUFF.42479.1
         (231 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21870.1 | Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704...   226   1e-59
AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 | chr2:18442287-184...   150   9e-37
AT5G07450.1 | Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359...   137   7e-33
AT3G05327.1 | Symbols:  | Cyclin family protein | chr3:1517581-1...   132   2e-31
AT5G61650.1 | Symbols: CYCP4;2, CYCP4 | CYCLIN P4;2 | chr5:24778...   132   2e-31
AT2G45080.1 | Symbols: cycp3;1 | cyclin p3;1 | chr2:18591688-185...   129   1e-30
AT3G63120.1 | Symbols: CYCP1;1 | cyclin p1;1 | chr3:23323143-233...   126   2e-29
AT3G60550.1 | Symbols: CYCP3;2 | cyclin p3;2 | chr3:22379846-223...   123   1e-28

>AT3G21870.1 | Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704813
           REVERSE LENGTH=210
          Length = 210

 Score =  226 bits (575), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/175 (67%), Positives = 130/175 (74%), Gaps = 10/175 (5%)

Query: 23  GP---TELNLPRVLWVLSSMLEKLVARNENL-QQLDGDGGPVRLGKSLNAFHGVRAPSIS 78
           GP   TE   PRVL ++S ++EKLVARNE L +Q  G       GKSL AFHGVRAPSIS
Sbjct: 15  GPESATEAATPRVLTIISHVMEKLVARNEWLAKQTKG------FGKSLEAFHGVRAPSIS 68

Query: 79  IPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDD 138
           I KYLERIYKYT CSP+CFVVGYVYIDRL H+HP SLV+SLNVHRLLVT VM+A+KILDD
Sbjct: 69  IAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLLVTCVMIAAKILDD 128

Query: 139 EHYNNAVYARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVN 193
            HYNN  YARVGGVSN              DFRVTV+ R FESYCFHLEKEM +N
Sbjct: 129 VHYNNEFYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQLN 183


>AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 |
           chr2:18442287-18443304 REVERSE LENGTH=202
          Length = 202

 Score =  150 bits (378), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 73/162 (45%), Positives = 102/162 (62%), Gaps = 6/162 (3%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           + +++  LSS+LE++   N+  +++          + ++ FHG+  P+I+I  YLERI+K
Sbjct: 10  MSKLIAFLSSLLERVAESNDLTRRVATQS------QRVSVFHGLSRPTITIQSYLERIFK 63

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           Y NCSPSCFVV YVY+DR THR P   + S NVHRLL+TSVMVA+K LDD +YNNA YA+
Sbjct: 64  YANCSPSCFVVAYVYLDRFTHRQPSLPINSFNVHRLLITSVMVAAKFLDDLYYNNAYYAK 123

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEM 190
           VGG+S                F + VT   F +Y  +L+KEM
Sbjct: 124 VGGISTKEMNFLELDFLFGLGFELNVTPNTFNAYFSYLQKEM 165


>AT5G07450.1 | Symbols: CYCP4;3 | cyclin p4;3 | chr5:2358418-2359253
           REVERSE LENGTH=216
          Length = 216

 Score =  137 bits (345), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 67/180 (37%), Positives = 107/180 (59%), Gaps = 6/180 (3%)

Query: 13  QLQQPETIETGPTELNLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGV 72
           Q+ Q    +  P    +P V+  +SS+L+++   N++L +      P R  K ++AF+ V
Sbjct: 4   QIDQKMIHDQEPMAEIMPNVITAMSSLLQRVSETNDDLSR------PFREHKRISAFNAV 57

Query: 73  RAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVA 132
             PSISI  Y+ERI+KY +CS SC++V Y+Y+DR   + P   + S NVHRL++TSV+V+
Sbjct: 58  TKPSISIRSYMERIFKYADCSDSCYIVAYIYLDRFIQKQPLLPIDSSNVHRLIITSVLVS 117

Query: 133 SKILDDEHYNNAVYARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLV 192
           +K +DD  YNNA YA+VGG++                F++ VT   +  YC  L++EM++
Sbjct: 118 AKFMDDLCYNNAFYAKVGGITTEEMNLLELDFLFGIGFQLNVTISTYNDYCSSLQREMVM 177


>AT3G05327.1 | Symbols:  | Cyclin family protein |
           chr3:1517581-1518399 REVERSE LENGTH=212
          Length = 212

 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 100/171 (58%), Gaps = 11/171 (6%)

Query: 24  PTELNLPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYL 83
           P +   PRV+ +L+S LEK++ +N+       +         +  FHG +APS+SI +Y 
Sbjct: 25  PPDSTPPRVITLLASTLEKMIQKNKKKFHTRHNKA-----DEITMFHGSKAPSLSIYRYT 79

Query: 84  ERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSL-----VISLNVHRLLVTSVMVASKILDD 138
           ERI++Y  CSP CFV  + YI R   R P++      + SLNVHRLL+TS++VA+K L+ 
Sbjct: 80  ERIHRYAQCSPVCFVAAFAYILRYLQR-PEATSTARRLTSLNVHRLLITSLLVAAKFLER 138

Query: 139 EHYNNAVYARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKE 189
           + YNNA YA++GGVS               DFR+ +T+  FE +C  L+KE
Sbjct: 139 QCYNNAYYAKIGGVSTEEMNRLERTFLVDVDFRLYITTETFEKHCLMLQKE 189


>AT5G61650.1 | Symbols: CYCP4;2, CYCP4 | CYCLIN P4;2 |
           chr5:24778265-24779019 FORWARD LENGTH=219
          Length = 219

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/162 (40%), Positives = 95/162 (58%), Gaps = 10/162 (6%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           +P VL  +S +L+++   N+NL Q           +  ++F GV  PSISI  YLERI++
Sbjct: 22  MPSVLTAMSYLLQRVSETNDNLSQ----------KQKPSSFTGVTKPSISIRSYLERIFE 71

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           Y NCS SC++V Y+Y+DR   + P   + S NVHRL++TSV+V++K +DD  YNN  YA+
Sbjct: 72  YANCSYSCYIVAYIYLDRFVKKQPFLPINSFNVHRLIITSVLVSAKFMDDLSYNNEYYAK 131

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEM 190
           VGG+S                F + VT   F +YC  L++EM
Sbjct: 132 VGGISREEMNMLELDFLFGIGFELNVTVSTFNNYCCFLQREM 173


>AT2G45080.1 | Symbols: cycp3;1 | cyclin p3;1 |
           chr2:18591688-18592443 FORWARD LENGTH=222
          Length = 222

 Score =  129 bits (324), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 113/203 (55%), Gaps = 8/203 (3%)

Query: 29  LPRVLWVLSSMLEKLVARNENLQQLDGDGGPVRLGKSLNAFHGVRAPSISIPKYLERIYK 88
           +P V+ VLSS++E+ +ARNE + +  G  G  R+      F     P ++I  YLERI++
Sbjct: 27  VPLVISVLSSLIERTLARNERISRSYGGFGKTRV------FDCREIPDMTIQSYLERIFR 80

Query: 89  YTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAVYAR 148
           YT   PS +VV YVYIDR    +    +   NVHRLL+T++M+ASK ++D +Y N+ +A+
Sbjct: 81  YTKAGPSVYVVAYVYIDRFCQNNQGFRISLTNVHRLLITTIMIASKYVEDMNYKNSYFAK 140

Query: 149 VGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERAL-TPKA 207
           VGG+                 F++ V    FESYC HLE+E+ + G G +IE+AL   + 
Sbjct: 141 VGGLETEDLNNLELEFLFLMGFKLHVNVSVFESYCCHLEREVSIGG-GYQIEKALRCAEE 199

Query: 208 IENEISVGDNQSSSPPQIVEIGL 230
           I++   V D +     Q   I L
Sbjct: 200 IKSRQIVQDPKHHHHHQFSRIML 222


>AT3G63120.1 | Symbols: CYCP1;1 | cyclin p1;1 |
           chr3:23323143-23323893 REVERSE LENGTH=221
          Length = 221

 Score =  126 bits (316), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 86/136 (63%), Gaps = 4/136 (2%)

Query: 65  SLNAFHGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRL 124
           S+  F G   P ISI  YL+RI+KY+ CSPSCFV+ ++YID   H+   +L+  LNVHRL
Sbjct: 61  SVTVFDGRSPPEISIAHYLDRIFKYSCCSPSCFVIAHIYIDHFLHK-TRALLKPLNVHRL 119

Query: 125 LVTSVMVASKILDDEHYNNAVYARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCF 184
           ++T+VM+A+K+ DD ++NNA YARVGGV+               DF++ V  + F ++C 
Sbjct: 120 IITTVMLAAKVFDDRYFNNAYYARVGGVTTRELNRLEMELLFTLDFKLQVDPQTFHTHCC 179

Query: 185 HLEKEMLVNGTGLKIE 200
            LEK+   N  G +IE
Sbjct: 180 QLEKQ---NRDGFQIE 192


>AT3G60550.1 | Symbols: CYCP3;2 | cyclin p3;2 |
           chr3:22379846-22380641 FORWARD LENGTH=230
          Length = 230

 Score =  123 bits (308), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 67/178 (37%), Positives = 101/178 (56%), Gaps = 11/178 (6%)

Query: 30  PRVLWVLSSMLEKLVARNENLQQL----DGDGGPVRLGKSLNAFHGVRAPSISIPKYLER 85
           P V+ VLSS++++ + RNE + +      G GG  ++      F     P ++I  YL R
Sbjct: 30  PLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQI------FDCREIPDMTIQSYLGR 83

Query: 86  IYKYTNCSPSCFVVGYVYIDRLTHRHPDSLVISLNVHRLLVTSVMVASKILDDEHYNNAV 145
           I++YT   PS +VV YVYIDR    +P   +   NVHRLL+T++M+ASK ++D +Y N+ 
Sbjct: 84  IFRYTKAGPSVYVVAYVYIDRFCQTNPGFRISLTNVHRLLITTIMIASKYVEDLNYRNSY 143

Query: 146 YARVGGVSNVXXXXXXXXXXXXXDFRVTVTSRAFESYCFHLEKEMLVNGTGLKIERAL 203
           +A+VGG+                 F++ V    FESYC HLE+E+   G G +IE+AL
Sbjct: 144 FAKVGGLETEDLNKLELEFLFLMGFKLHVNVSVFESYCCHLEREVSFGG-GYQIEKAL 200