Miyakogusa Predicted Gene

Lj3g3v1340420.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1340420.1 tr|A8J251|A8J251_CHLRE Predicted protein
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_191680 PE=4
SV=1,38.06,0.000000000002,seg,NULL,CUFF.42477.1
         (284 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21865.1 | Symbols: PEX22 | peroxin 22 | chr3:7701308-7703218...   346   9e-96

>AT3G21865.1 | Symbols: PEX22 | peroxin 22 | chr3:7701308-7703218
           REVERSE LENGTH=283
          Length = 283

 Score =  346 bits (888), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 186/273 (68%), Positives = 214/273 (78%), Gaps = 4/273 (1%)

Query: 16  QQLFHLIKRFGAYVTFKISNLVSL-SLHNLDIRSXXXXXXXXXXXXFTWRLLRSPGEPQQ 74
           +++  LIKR  AYV FK+S+L S  S+ NLD RS            FTWR +R+PGE +Q
Sbjct: 11  EEIVRLIKRLSAYVAFKMSSLFSTTSIRNLDSRSIGAIAGLAIAVIFTWRAIRTPGEQRQ 70

Query: 75  RQQKR---QGASSSNSNPGARAGSIASVVPSEASLPSHDSRAQNVVDEFFQPVKPTLGQI 131
           R+Q +     A +S++   A   ++AS V  E S P  D+  Q+VVD+FFQPVKPTLGQI
Sbjct: 71  RRQPKRRIHNAETSSAAAAASQSNLASSVAPEVSSPREDNAVQDVVDQFFQPVKPTLGQI 130

Query: 132 VRQKLSEGRKVTCRLLGVVLEETSPEELQKQATVRSSVLEVLLEITKYCDLYLMERVLDD 191
           VRQKLSEGRKVTCRLLGV+LEETSPEELQKQATVRSSVLEVLLEITKY DLYLMERVLDD
Sbjct: 131 VRQKLSEGRKVTCRLLGVILEETSPEELQKQATVRSSVLEVLLEITKYSDLYLMERVLDD 190

Query: 192 ESEKRVLVALEEAGVFTSGGLVKDKVLFCSTENGRSSFVRQLEPDWHIDTNPEIVFQLAR 251
           ESE +VL ALE AGVFTSGGLVKDKVLFCSTE GR+SFVRQLEPDWHIDTNPEI  QLAR
Sbjct: 191 ESEAKVLQALENAGVFTSGGLVKDKVLFCSTEIGRTSFVRQLEPDWHIDTNPEISTQLAR 250

Query: 252 FIKYQLHVSPHKSERTAGNVFSAPALELFFGSI 284
           FIKYQLHV+  K ERTA NVF++ ++E FFGS+
Sbjct: 251 FIKYQLHVATVKPERTAPNVFTSQSIEQFFGSV 283