Miyakogusa Predicted Gene

Lj3g3v1296990.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1296990.2 tr|F2CPY5|F2CPY5_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,77.59,4e-18,Ring finger,Zinc finger, RING-type; ZF_RING_2,Zinc
finger, RING-type; seg,NULL; zf-RING_2,Zinc finge,CUFF.42419.2
         (392 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-...   409   e-114
AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-...   409   e-114
AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-...   409   e-114
AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A | chr4:8196012-...   113   2e-25
AT4G00335.2 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-...    61   2e-09
AT4G00335.1 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-...    61   2e-09
AT5G15790.2 | Symbols:  | RING/U-box superfamily protein | chr5:...    60   3e-09
AT5G15790.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    60   3e-09
AT3G58720.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    59   4e-09
AT3G58720.2 | Symbols:  | RING/U-box superfamily protein | chr3:...    59   4e-09
AT5G38895.3 | Symbols:  | RING/U-box superfamily protein | chr5:...    59   5e-09
AT4G00335.3 | Symbols: RHB1A | RING-H2 finger B1A | chr4:146866-...    59   5e-09
AT3G02290.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    59   5e-09
AT5G38895.2 | Symbols:  | RING/U-box superfamily protein | chr5:...    59   8e-09
AT5G38895.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    57   2e-08
AT5G41350.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    56   4e-08
AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p...    56   4e-08
AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p...    56   4e-08
AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p...    55   8e-08
AT1G18780.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    54   2e-07
AT4G26400.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    52   5e-07
AT4G26400.2 | Symbols:  | RING/U-box superfamily protein | chr4:...    52   5e-07
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |...    52   5e-07
AT5G42940.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    52   7e-07
AT3G19910.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    52   8e-07
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ...    50   3e-06
AT3G10910.1 | Symbols:  | RING/U-box superfamily protein | chr3:...    50   3e-06
AT1G14200.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    50   3e-06
AT4G12140.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    50   4e-06
AT2G03000.1 | Symbols:  | RING/U-box superfamily protein | chr2:...    50   4e-06
AT4G34040.1 | Symbols:  | RING/U-box superfamily protein | chr4:...    49   4e-06
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7...    49   5e-06
AT5G37270.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    49   5e-06
AT5G37250.1 | Symbols:  | RING/U-box superfamily protein | chr5:...    49   5e-06
AT1G53820.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    49   5e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c...    49   7e-06
AT1G55530.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    48   1e-05

>AT5G22000.3 | Symbols: RHF2A | RING-H2 group F2A |
           chr5:7277436-7279553 FORWARD LENGTH=375
          Length = 375

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/389 (57%), Positives = 263/389 (67%), Gaps = 27/389 (6%)

Query: 10  ETTKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQ 69
           ETT SE HLTSAAAFVEGGIQDACDDACSICLE FC+S+PST+T CKHE+HLQCILEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 70  RSSQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAIFHHPTLGDFELQHLPVGA 129
           RSSQCPMCWQ ISLKDPTSQELLEAVE+ERN RFNP+RNA IF HPTLGDFELQHLPVG 
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 130 NDADLEERIIQHLXXXXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTH---XXXXXXXX 186
           ++A++EERIIQHL               EG R+RSS+QG  QF+VFS+            
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPP 185

Query: 187 XXXXLNQRGDGEPAPAVAVATLSQTP--ATGEESPQLTLVPPVQADQVPVLGSGSAALVA 244
                +QR + +        T+S  P  A GE S Q    PP  +    V  S S +   
Sbjct: 186 MPSSPSQRDESD--------TVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSNSR 237

Query: 245 D-NQGSSYIXXXXXXXXXXXXXDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTRGWK 303
             NQ S                DRAGPSELQSFSESLKS+LNAVSTRYK+SISK+TR WK
Sbjct: 238 PLNQSS------------PSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285

Query: 304 ERWFSRNTSMSDLGSEVRREVNAGIATVSRMMERLETRDNRSSSNSAPTNLEDGSVQGSN 363
           +R FSRNTSM+DLGSEV+REV+AGIATVSRMMERLETR+N   S ++ +++ +     +N
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETN 345

Query: 364 DQHLTDTEVD-GLVRDNNTKASCAAGSSS 391
           ++H      D   V +   K +CA GS S
Sbjct: 346 NEHNRAAAGDEHSVNERGVKETCATGSGS 374


>AT5G22000.1 | Symbols: RHF2A | RING-H2 group F2A |
           chr5:7277436-7279553 FORWARD LENGTH=375
          Length = 375

 Score =  409 bits (1052), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/389 (57%), Positives = 263/389 (67%), Gaps = 27/389 (6%)

Query: 10  ETTKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQ 69
           ETT SE HLTSAAAFVEGGIQDACDDACSICLE FC+S+PST+T CKHE+HLQCILEWCQ
Sbjct: 6   ETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQ 65

Query: 70  RSSQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAIFHHPTLGDFELQHLPVGA 129
           RSSQCPMCWQ ISLKDPTSQELLEAVE+ERN RFNP+RNA IF HPTLGDFELQHLPVG 
Sbjct: 66  RSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQHLPVGV 125

Query: 130 NDADLEERIIQHLXXXXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTH---XXXXXXXX 186
           ++A++EERIIQHL               EG R+RSS+QG  QF+VFS+            
Sbjct: 126 DNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPNASSPPPHPP 185

Query: 187 XXXXLNQRGDGEPAPAVAVATLSQTP--ATGEESPQLTLVPPVQADQVPVLGSGSAALVA 244
                +QR + +        T+S  P  A GE S Q    PP  +    V  S S +   
Sbjct: 186 MPSSPSQRDESD--------TVSNLPHNALGEGSHQSNTQPPTSSHPRQVSPSASDSNSR 237

Query: 245 D-NQGSSYIXXXXXXXXXXXXXDRAGPSELQSFSESLKSKLNAVSTRYKDSISKSTRGWK 303
             NQ S                DRAGPSELQSFSESLKS+LNAVSTRYK+SISK+TR WK
Sbjct: 238 PLNQSS------------PSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISKNTRNWK 285

Query: 304 ERWFSRNTSMSDLGSEVRREVNAGIATVSRMMERLETRDNRSSSNSAPTNLEDGSVQGSN 363
           +R FSRNTSM+DLGSEV+REV+AGIATVSRMMERLETR+N   S ++ +++ +     +N
Sbjct: 286 DRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDVSENHTPETN 345

Query: 364 DQHLTDTEVD-GLVRDNNTKASCAAGSSS 391
           ++H      D   V +   K +CA GS S
Sbjct: 346 NEHNRAAAGDEHSVNERGVKETCATGSGS 374


>AT5G22000.2 | Symbols: RHF2A | RING-H2 group F2A |
           chr5:7277436-7279553 FORWARD LENGTH=375
          Length = 375

 Score =  409 bits (1051), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/398 (57%), Positives = 266/398 (66%), Gaps = 31/398 (7%)

Query: 1   MEVPVMEENETTKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFH 60
           MEV V     TT SE HLTSAAAFVEGGIQDACDDACSICLE FC+S+PST+T CKHE+H
Sbjct: 1   MEVRV----STTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYH 56

Query: 61  LQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERNVRFNPSRNAAIFHHPTLGDF 120
           LQCILEWCQRSSQCPMCWQ ISLKDPTSQELLEAVE+ERN RFNP+RNA IF HPTLGDF
Sbjct: 57  LQCILEWCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDF 116

Query: 121 ELQHLPVGANDADLEERIIQHLXXXXXXXXXXXXXXXEGQRNRSSAQGRPQFLVFSTH-- 178
           ELQHLPVG ++A++EERIIQHL               EG R+RSS+QG  QF+VFS+   
Sbjct: 117 ELQHLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQPN 176

Query: 179 -XXXXXXXXXXXXLNQRGDGEPAPAVAVATLSQTP--ATGEESPQLTLVPPVQADQVPVL 235
                         +QR + +        T+S  P  A GE S Q    PP  +    V 
Sbjct: 177 ASSPPPHPPMPSSPSQRDESD--------TVSNLPHNALGEGSHQSNTQPPTSSHPRQVS 228

Query: 236 GSGSAALVAD-NQGSSYIXXXXXXXXXXXXXDRAGPSELQSFSESLKSKLNAVSTRYKDS 294
            S S +     NQ S                DRAGPSELQSFSESLKS+LNAVSTRYK+S
Sbjct: 229 PSASDSNSRPLNQSS------------PSEQDRAGPSELQSFSESLKSRLNAVSTRYKES 276

Query: 295 ISKSTRGWKERWFSRNTSMSDLGSEVRREVNAGIATVSRMMERLETRDNRSSSNSAPTNL 354
           ISK+TR WK+R FSRNTSM+DLGSEV+REV+AGIATVSRMMERLETR+N   S ++ +++
Sbjct: 277 ISKNTRNWKDRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVSDV 336

Query: 355 EDGSVQGSNDQHLTDTEVD-GLVRDNNTKASCAAGSSS 391
            +     +N++H      D   V +   K +CA GS S
Sbjct: 337 SENHTPETNNEHNRAAAGDEHSVNERGVKETCATGSGS 374


>AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A |
           chr4:8196012-8198240 FORWARD LENGTH=371
          Length = 371

 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLE 93
           DDACSICLE F   +PSTVT CKHE+HLQCI+EW QRS +CP+CWQ   L+DP SQELL 
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLA 102

Query: 94  AVERERNVR 102
           AVE+ER ++
Sbjct: 103 AVEKERLLK 111



 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/73 (50%), Positives = 52/73 (71%)

Query: 272 ELQSFSESLKSKLNAVSTRYKDSISKSTRGWKERWFSRNTSMSDLGSEVRREVNAGIATV 331
           E  S  E++KSKL A S +YK+SISKS +G KE+  +RN S+ +L   V+RE+NAGIA V
Sbjct: 249 EASSLPEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREMNAGIAGV 308

Query: 332 SRMMERLETRDNR 344
           +RM+ER++    R
Sbjct: 309 ARMIERMDFSSKR 321


>AT4G00335.2 | Symbols: RHB1A | RING-H2 finger B1A |
           chr4:146866-147962 FORWARD LENGTH=190
          Length = 190

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKD 85
           +D C IC ED+    P   T C+HEFHL C+LEW +RS +CP+C + +   D
Sbjct: 136 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187


>AT4G00335.1 | Symbols: RHB1A | RING-H2 finger B1A |
           chr4:146866-147962 FORWARD LENGTH=190
          Length = 190

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKD 85
           +D C IC ED+    P   T C+HEFHL C+LEW +RS +CP+C + +   D
Sbjct: 136 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPICDKEVVFDD 187


>AT5G15790.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:5149800-5150964 FORWARD LENGTH=232
          Length = 232

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 27/44 (61%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           +D C  CLE++    P  VT C H FHL CI EW +RS  CP+C
Sbjct: 179 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVC 222


>AT5G15790.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:5149800-5150964 FORWARD LENGTH=232
          Length = 232

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 27/44 (61%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           +D C  CLE++    P  VT C H FHL CI EW +RS  CP+C
Sbjct: 179 EDVCPTCLEEYISENPKIVTKCSHHFHLSCIYEWMERSENCPVC 222


>AT3G58720.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:21716920-21717892 REVERSE LENGTH=238
          Length = 238

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQE 90
           D  CS+CLEDF   E   +T CKH FH +CI+ W +   QCP+C     +  PT Q+
Sbjct: 141 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR--FVILKPTKQD 195


>AT3G58720.2 | Symbols:  | RING/U-box superfamily protein |
           chr3:21716920-21717908 REVERSE LENGTH=266
          Length = 266

 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 2/57 (3%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQE 90
           D  CS+CLEDF   E   +T CKH FH +CI+ W +   QCP+C + + LK PT Q+
Sbjct: 169 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVC-RFVILK-PTKQD 223


>AT5G38895.3 | Symbols:  | RING/U-box superfamily protein |
           chr5:15571302-15573315 FORWARD LENGTH=326
          Length = 326

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISL 83
           +D C  CL+D+    P  +T C H FHL CI EW +RS  CP+C + ++ 
Sbjct: 271 EDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 320


>AT4G00335.3 | Symbols: RHB1A | RING-H2 finger B1A |
           chr4:146866-147957 FORWARD LENGTH=189
          Length = 189

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 30/44 (68%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           +D C IC ED+    P   T C+HEFHL C+LEW +RS +CP+C
Sbjct: 136 EDCCPICFEDYDVENPRLTTKCEHEFHLSCLLEWIERSDRCPIC 179


>AT3G02290.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:459385-460688 FORWARD LENGTH=231
          Length = 231

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 22/44 (50%), Positives = 27/44 (61%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           +D C  CLE++    P  VT C H FHL CI EW +RS  CP+C
Sbjct: 178 EDVCPTCLEEYTSENPKIVTKCSHHFHLSCIYEWMERSENCPVC 221


>AT5G38895.2 | Symbols:  | RING/U-box superfamily protein |
           chr5:15571321-15573315 FORWARD LENGTH=296
          Length = 296

 Score = 58.5 bits (140), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISL 83
           +D C  CL+D+    P  +T C H FHL CI EW +RS  CP+C + ++ 
Sbjct: 241 EDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 290


>AT5G38895.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:15572084-15573315 FORWARD LENGTH=221
          Length = 221

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 21/50 (42%), Positives = 30/50 (60%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPISL 83
           +D C  CL+D+    P  +T C H FHL CI EW +RS  CP+C + ++ 
Sbjct: 166 EDICPTCLDDYTLENPKIITKCSHHFHLSCIYEWMERSETCPVCGKVMAF 215


>AT5G41350.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:16542026-16543092 REVERSE LENGTH=212
          Length = 212

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/41 (53%), Positives = 26/41 (63%)

Query: 37  CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           C ICLE++    P  V  C H FHL CILEW +RS  CP+C
Sbjct: 161 CPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVC 201


>AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
           protein | chr4:12241113-12242190 REVERSE LENGTH=208
          Length = 208

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 35  DACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           D C ICLE++    P  +T C H+FHL CIL W +RS  CP+C
Sbjct: 157 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVC 199


>AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
           protein | chr4:12241113-12242190 REVERSE LENGTH=208
          Length = 208

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 35  DACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           D C ICLE++    P  +T C H+FHL CIL W +RS  CP+C
Sbjct: 157 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVC 199


>AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
           protein | chr4:12241113-12241837 REVERSE LENGTH=153
          Length = 153

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query: 35  DACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           D C ICLE++    P  +T C H+FHL CIL W +RS  CP+C
Sbjct: 102 DECPICLEEYEIDNPKLLTKCGHDFHLACILAWMERSEACPVC 144


>AT1G18780.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:6476258-6477235 REVERSE LENGTH=325
          Length = 325

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 21/44 (47%), Positives = 27/44 (61%)

Query: 34  DDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           +D C+ICLE+F D        C HEF  +C+LEW  RS  CP+C
Sbjct: 274 NDVCTICLEEFDDGRSIVTLPCGHEFDEECVLEWFVRSHVCPLC 317


>AT4G26400.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:13344953-13346023 REVERSE LENGTH=356
          Length = 356

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 37  CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           CSICL+DF     +    CKH+FH++CI+ W +  S CP+C
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVC 281


>AT4G26400.2 | Symbols:  | RING/U-box superfamily protein |
           chr4:13344953-13346023 REVERSE LENGTH=356
          Length = 356

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 37  CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           CSICL+DF     +    CKH+FH++CI+ W +  S CP+C
Sbjct: 241 CSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVC 281


>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
           chr5:22818254-22819444 FORWARD LENGTH=396
          Length = 396

 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 3/69 (4%)

Query: 37  CSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPI---SLKDPTSQELLE 93
           CS+CL+DF     +    CKH+FH++CI+ W +  S CP+C   +   +  D  ++   E
Sbjct: 259 CSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELPSSADDDDETKTDSE 318

Query: 94  AVERERNVR 102
            V R RNVR
Sbjct: 319 RVLRTRNVR 327


>AT5G42940.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:17216649-17219171 REVERSE LENGTH=691
          Length = 691

 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 30  QDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           QDA  + C +C E++ + E      C HEFH QCI EW ++ + CP+C
Sbjct: 632 QDA--EPCCVCQEEYTEGEDMGTLECGHEFHSQCIKEWLKQKNLCPIC 677


>AT3G19910.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:6926497-6929324 FORWARD LENGTH=340
          Length = 340

 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 33/59 (55%)

Query: 24  FVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMCWQPIS 82
           + EG  Q+  +++C IC  D+ D E   +  CKH +H +CI  W + +  CP+C   +S
Sbjct: 275 YKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNWLKINKVCPVCSAEVS 333


>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
           chr1:11675531-11676529 FORWARD LENGTH=332
          Length = 332

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)

Query: 28  GIQDACDDACSICLEDFCDSEP-STVTGCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 86
            ++D   D CSICL +F D +    ++ C H FH  CI  W +    CP+C + + ++D 
Sbjct: 145 SVKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDR 204

Query: 87  TSQE 90
           TS E
Sbjct: 205 TSLE 208


>AT3G10910.1 | Symbols:  | RING/U-box superfamily protein |
           chr3:3413068-3413613 REVERSE LENGTH=181
          Length = 181

 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 28  GIQDACDDACSICLEDFCDSEPSTVT-GCKHEFHLQCILEWCQRSSQCPMCWQPISLKDP 86
           GI D     C ICL DF D E   V   C H FH++CI  W    S CP C Q + L+ P
Sbjct: 105 GIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLEQP 164

Query: 87  T 87
           +
Sbjct: 165 S 165


>AT1G14200.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:4854532-4855071 REVERSE LENGTH=179
          Length = 179

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/42 (40%), Positives = 28/42 (66%)

Query: 36  ACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
           +C+ICL+++   + +    CKH+FH +C+ EW  R + CPMC
Sbjct: 108 SCAICLDEWSKGDVAAEMPCKHKFHSKCVEEWLGRHATCPMC 149


>AT4G12140.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:7266546-7267154 REVERSE LENGTH=202
          Length = 202

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 35  DACSICLEDFCDSEPS--TVTGCKHEFHLQCILEWCQRSSQCPMC 77
           D+CSICL+    S  +  T   C H FH  C++EW +R + CPMC
Sbjct: 151 DSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRKNTCPMC 195


>AT2G03000.1 | Symbols:  | RING/U-box superfamily protein |
           chr2:875233-877207 FORWARD LENGTH=535
          Length = 535

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 7/56 (12%)

Query: 22  AAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSSQCPMC 77
            A VE G        C IC E++  S+  T   CKH++HL+C+ +W +  + CP C
Sbjct: 473 VAMVEKG-------ECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIHTSCPQC 521


>AT4G34040.1 | Symbols:  | RING/U-box superfamily protein |
           chr4:16304638-16307503 REVERSE LENGTH=666
          Length = 666

 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)

Query: 10  ETTKSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQ 69
           +  K   H +SAA    G  QD   + C +C E++ + +     GC HEFH  C+ +W  
Sbjct: 598 KVMKQHKHTSSAA----GSHQDM--EPCCVCQEEYAEGDDLGTLGCGHEFHTACVKQWLM 651

Query: 70  RSSQCPMC 77
             + CP+C
Sbjct: 652 LKNLCPIC 659


>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
           chr2:7704142-7705312 FORWARD LENGTH=241
          Length = 241

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 35  DACSICLEDFCDSEPS-TVTGCKHEFHLQCILEWCQRSSQCPMCWQPI 81
           D+CS+CL+DF   E   ++  C H FHL CI  W  R   CPMC + I
Sbjct: 194 DSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241


>AT5G37270.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:14757933-14758559 REVERSE LENGTH=208
          Length = 208

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 36  ACSICLEDFCDSEPSTVT---GCKHEFHLQCILEWCQRSSQCPMC 77
            CSICLEDF +S    +     C H FH  CI EW +R   CP+C
Sbjct: 152 TCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLC 196


>AT5G37250.1 | Symbols:  | RING/U-box superfamily protein |
           chr5:14750393-14750971 FORWARD LENGTH=192
          Length = 192

 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 36  ACSICLEDFCDSEPSTVT---GCKHEFHLQCILEWCQRSSQCPMC 77
            CSICLEDF +S    +     C H FH  CI EW +R   CP+C
Sbjct: 136 TCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLC 180


>AT1G53820.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:20091491-20092423 FORWARD LENGTH=310
          Length = 310

 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 37  CSICLEDFCDSEPSTVT-GCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPTSQELLEAV 95
           C++CL D  D + + V   C H FH+ CI  W Q  S CP+C   +   + T+    E +
Sbjct: 120 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGL 179

Query: 96  ERERNV-------RFNPSRNAAIFH 113
            + +N        + NPS++ +  H
Sbjct: 180 PQNQNFESGHSTNQHNPSQDQSFVH 204


>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
           chr1:27226405-27227379 FORWARD LENGTH=324
          Length = 324

 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 3/51 (5%)

Query: 30  QDACDDA--CSICLEDFCDSEPSTVT-GCKHEFHLQCILEWCQRSSQCPMC 77
           QD+C D   CSICL +    + + +   C H FH++CI  W Q  S CP+C
Sbjct: 118 QDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPIC 168


>AT1G55530.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:20729472-20730527 REVERSE LENGTH=351
          Length = 351

 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)

Query: 13  KSEAHLTSAAAFVEGGIQDACDDACSICLEDFCDSEPSTVTGCKHEFHLQCILEWCQRSS 72
           K EA    A   +E  +Q      CS+CL+DF     + +  C H+FH  C+L W +  S
Sbjct: 205 KKEAVEALATVKIEETLQ------CSVCLDDFEIGTEAKLMPCTHKFHSDCLLPWLELHS 258

Query: 73  QCPMC 77
            CP+C
Sbjct: 259 SCPVC 263