Miyakogusa Predicted Gene

Lj3g3v1296980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1296980.1 Non Chatacterized Hit- tr|J3N8H1|J3N8H1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB11G2,67.92,0.000000000003,FAS1 domain,FAS1 domain; seg,NULL;
FAS1,FAS1 domain; no description,FAS1 domain; Fasciclin,FAS1
doma,CUFF.42417.1
         (456 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan pr...   588   e-168
AT5G06390.1 | Symbols: FLA17 | FASCICLIN-like arabinogalactan pr...   588   e-168
AT3G11700.1 | Symbols: FLA18 | FASCICLIN-like arabinogalactan pr...   570   e-163
AT3G52370.1 | Symbols: FLA15 | FASCICLIN-like arabinogalactan pr...   570   e-163
AT5G05650.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   114   1e-25

>AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan
           protein 16 precursor | chr2:15059859-15061810 FORWARD
           LENGTH=445
          Length = 445

 Score =  588 bits (1516), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 298/423 (70%), Positives = 332/423 (78%), Gaps = 12/423 (2%)

Query: 36  QINSNSVLVALLDSHYTELAELVEKAMLLQKLEDTVAAHNITIFAPTNEALERNLDPDFK 95
           QINSNSVLVALLDSHYTELAELVEKA+LLQ LE+ V  HNITIFAP N+ALERNLDP FK
Sbjct: 33  QINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGKHNITIFAPRNDALERNLDPLFK 92

Query: 96  RFLLEPGNLHSLQTLLLFHVIPTRIGS-DYPHGSTRHLTLSNHHLRLKKNLTAGDWTVDR 154
            FLLEP NL SLQ+LL+FH++P RI S  +P  S  H TLSN HL L  ++      VD 
Sbjct: 93  SFLLEPRNLKSLQSLLMFHILPKRITSPQWPSLSHHHRTLSNDHLHLTVDVNT--LKVDS 150

Query: 155 VTVTHPEVVTRPDGVIHGISRLLVPRSVEDEFNRRRNLRAITAVKPEAAPEVDPRTHRLK 214
             +  P+ V RPDG+IHGI RLL+PRSV+++FNRRR+LR+I+AV PE APEVDPRTHRLK
Sbjct: 151 AEIIRPDDVIRPDGIIHGIERLLIPRSVQEDFNRRRSLRSISAVIPEGAPEVDPRTHRLK 210

Query: 215 KTPPAAKPGSSPALPIYEXXXXXXXXXXXXXXXXXXXHHHFNGEAQVKDFIQTLLHYGGY 274
           K  PA   G+ P LPIY+                     HFNG+AQVKDFI TLLHYGGY
Sbjct: 211 KPSPAVPAGAPPVLPIYDAMSPGPSLAPAPAPGPGGPRGHFNGDAQVKDFIHTLLHYGGY 270

Query: 275 NEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPEQIMYYHLI 334
           NEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTT+QLSEPGAPEQIMYYH+I
Sbjct: 271 NEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHII 330

Query: 335 PEYQTEESMYNAVRRFGKVNYDTLRLPHKVVAKEADGSVKFGHGDGSAYLFDPDIFTDGR 394
           PEYQTEESMYNAVRRFGKV YD+LR PHKV+A+EADGSVKFGHGDGSAYLFDPDI+TDGR
Sbjct: 331 PEYQTEESMYNAVRRFGKVKYDSLRFPHKVLAQEADGSVKFGHGDGSAYLFDPDIYTDGR 390

Query: 395 ISVQGIDGVLFPMEEAPE-EVKPDSQTGQPAKVVVKHRRGKLLEAACKMLGTFGQHSRFS 453
           ISVQGIDGVLFP EE P  E+KP +      K V K RRGKL+E AC+M+G     SRF 
Sbjct: 391 ISVQGIDGVLFPKEETPATEIKPAAPV---VKKVSKSRRGKLMEVACRMMG-----SRFI 442

Query: 454 SCQ 456
            CQ
Sbjct: 443 PCQ 445


>AT5G06390.1 | Symbols: FLA17 | FASCICLIN-like arabinogalactan
           protein 17 precursor | chr5:1952939-1955047 FORWARD
           LENGTH=458
          Length = 458

 Score =  588 bits (1516), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 299/434 (68%), Positives = 338/434 (77%), Gaps = 14/434 (3%)

Query: 29  KTPSSTS-QINSNSVLVALLDSHYTELAELVEKAMLLQKLEDTVAAHNITIFAPTNEALE 87
           ++PSS S QINSNSVLVALLDS YTELAELVEKA+LLQ LED V  HNITIFAP NEALE
Sbjct: 33  QSPSSGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALE 92

Query: 88  RNLDPDFKRFLLEPGNLHSLQTLLLFHVIPTRIGSD-YPH---GSTRHLTLSNHHLRLKK 143
           R+LDP+FKRFLLEPGNL SLQTLL+FH+IP R+GS+ +P    G  +H TL N  +RL  
Sbjct: 93  RDLDPEFKRFLLEPGNLKSLQTLLMFHIIPNRVGSNQWPSEESGRVKHHTLGNDQVRLSN 152

Query: 144 NLTAGDWTVDRVTVTHPEVVTRPDGVIHGISRLLVPRSVEDEFNRRRNLRAITAVKPEAA 203
               G   VD   +  P+ +TRPDG+IHGI RLL+PRSV+++FNRRR+L++I+AV PE A
Sbjct: 153 G--QGKKMVDLAEIIRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRSLQSISAVLPEGA 210

Query: 204 PEVDPRTHRLKKTPPAAKPGSSPALPIYEXXXXXXXXXXXXXXXXXXXHHHFNGEAQVKD 263
           PEVDPRT+RLKK       GS PALPI                      HHF+GEAQVKD
Sbjct: 211 PEVDPRTNRLKKPAAPVPAGSPPALPIQSAMAPGPSLAPAPAPGPGGKQHHFDGEAQVKD 270

Query: 264 FIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPG 323
           FI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTT+QLSEPG
Sbjct: 271 FIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPG 330

Query: 324 APEQIMYYHLIPEYQTEESMYNAVRRFGKVNYDTLRLPHKVVAKEADGSVKFGHGDGSAY 383
           APEQI+YYH+IPEYQTEESMYN+VRRFGKV +DTLR PHKV AKEADGSVKFG G+ SAY
Sbjct: 331 APEQIVYYHIIPEYQTEESMYNSVRRFGKVKFDTLRFPHKVAAKEADGSVKFGDGEKSAY 390

Query: 384 LFDPDIFTDGRISVQGIDGVLFPM-EEAPEEVKPDSQTGQPAKVVVKHRRGKLLEAACKM 442
           LFDPDI+TDGRISVQGIDGVLFP  EE  E VK      +P K +V+ RRGKLLE AC M
Sbjct: 391 LFDPDIYTDGRISVQGIDGVLFPQEEEVVESVK------KPVKKIVQPRRGKLLEVACSM 444

Query: 443 LGTFGQHSRFSSCQ 456
           LG FG+ +  S C+
Sbjct: 445 LGAFGKDTYLSKCR 458


>AT3G11700.1 | Symbols: FLA18 | FASCICLIN-like arabinogalactan
           protein 18 precursor | chr3:3698992-3700971 FORWARD
           LENGTH=462
          Length = 462

 Score =  570 bits (1469), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 300/434 (69%), Positives = 336/434 (77%), Gaps = 15/434 (3%)

Query: 32  SSTSQINSNSVLVALLDSHYTELAELVEKAMLLQKLEDTVAAHNITIFAPTNEALERNLD 91
           + + QINSNSVLVALLDS YTELAELVEKA+LLQ LED V  HNITIFAP NEALER+LD
Sbjct: 34  TGSGQINSNSVLVALLDSRYTELAELVEKALLLQTLEDAVGRHNITIFAPRNEALERDLD 93

Query: 92  PDFKRFLLEPGNLHSLQTLLLFHVIPTRIGSD-YPH---GSTRHLTLSN----HHLRLKK 143
           PDFKRFLL+PGNL SLQTLLL H+IP R+GS+ +P    G  +H+TL +    H  +LK 
Sbjct: 94  PDFKRFLLQPGNLKSLQTLLLSHIIPKRVGSNQWPEENSGRVKHVTLGHDQVLHLSKLKG 153

Query: 144 NLTAGDWTVDRVTVTHPEVVTRPDGVIHGISRLLVPRSVEDEFNRRRNLRAITAVKPEAA 203
             T G   V+   +T P+ +TRPDG+IHGI RLL+PRSV+++FNRRRNLR+I+AV PE A
Sbjct: 154 --TNGKRLVNSAVITRPDDLTRPDGLIHGIERLLIPRSVQEDFNRRRNLRSISAVLPEGA 211

Query: 204 PEVDPRTHRLKKTPPAAK--PGSSPALPIYEXXXXXXXXXXXXXXXXXXXHHHFNGEAQV 261
           PE+DPRT+RLKK+  A     GS P LPI                     H HFNG+AQV
Sbjct: 212 PEIDPRTNRLKKSATAVSVPAGSPPVLPIESAMAPGPSLAPAPAPGPGGAHKHFNGDAQV 271

Query: 262 KDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSE 321
           KDFI TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAM KLTT+QLSE
Sbjct: 272 KDFIHTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMGKLTTDQLSE 331

Query: 322 PGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVNYDTLRLPHKVVAKEADGSVKFGHGDGS 381
           PGAPEQIMYYH+IPEYQTEESMYN+VRRFGKV Y+TLR PHKV AKEADGSVKFG GD S
Sbjct: 332 PGAPEQIMYYHIIPEYQTEESMYNSVRRFGKVKYETLRFPHKVGAKEADGSVKFGSGDRS 391

Query: 382 AYLFDPDIFTDGRISVQGIDGVLFPMEEAPEEVKPDSQTGQPAKVVVKHRRGKLLEAACK 441
           AYLFDPDI+TDGRISVQGIDGVLFP E+  E VK    TG P K VV+ RRGKLLE AC 
Sbjct: 392 AYLFDPDIYTDGRISVQGIDGVLFPEEKEEETVK--KPTG-PVKKVVQPRRGKLLEVACS 448

Query: 442 MLGTFGQHSRFSSC 455
           MLG  G+ S  S C
Sbjct: 449 MLGAIGKDSYLSRC 462


>AT3G52370.1 | Symbols: FLA15 | FASCICLIN-like arabinogalactan
           protein 15 precursor | chr3:19417549-19419549 FORWARD
           LENGTH=436
          Length = 436

 Score =  570 bits (1469), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 294/431 (68%), Positives = 331/431 (76%), Gaps = 18/431 (4%)

Query: 28  PKTPSSTSQINSNSVLVALLDSHYTELAELVEKAMLLQKLEDTVAAHNITIFAPTNEALE 87
           P  P S  QINSNSVLVALLDSHYTELAELVEKA+LLQ LE+ V  HNITIFAP N+ALE
Sbjct: 22  PDKPGS-GQINSNSVLVALLDSHYTELAELVEKALLLQTLEEAVGQHNITIFAPRNDALE 80

Query: 88  RNLDPDFKRFLLEPGNLHSLQTLLLFHVIPTRIGS-DYPHGSTRHLTLSNHHLRLKKNLT 146
           +NLDP+FK FLL+P NL SLQ+LL+FH++P RI S  +      H TLSN HL       
Sbjct: 81  KNLDPEFKSFLLQPKNLKSLQSLLMFHILPKRITSPQFSSAVVSHRTLSNDHLHFT---- 136

Query: 147 AGDWTVDRVTVTHPEVVTRPDGVIHGISRLLVPRSVEDEFNRRRNLRAITAVKPEAAPEV 206
             +  V+   +T P+ +TRPDG+IHGI RLL+PRSV+++FNRRR+LR+I AV PE APEV
Sbjct: 137 --NGKVNSAEITKPDDLTRPDGIIHGIERLLIPRSVQEDFNRRRSLRSIAAVLPEGAPEV 194

Query: 207 DPRTHRLKKTPPAAKPGSSPALPIYEXXXXXXXXXXXXXXXXXXXHHHFNGEAQVKDFIQ 266
           DPRTHRLKK P     G+ P LP+Y+                    HHFNGEAQVKDFI 
Sbjct: 195 DPRTHRLKKKPAPIPAGAPPVLPVYDAMSPGPSLAPAPAPGPGGPRHHFNGEAQVKDFIH 254

Query: 267 TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTEQLSEPGAPE 326
           TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTT+QLSEPGAPE
Sbjct: 255 TLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPE 314

Query: 327 QIMYYHLIPEYQTEESMYNAVRRFGKVNYDTLRLPHKVVAKEADGSVKFGHGDGSAYLFD 386
           QIMYYH+IPEYQTEESMYN+VRRFGK+ YD+LR PHKV A+EADGSVKFGHGDGSAYLFD
Sbjct: 315 QIMYYHIIPEYQTEESMYNSVRRFGKIRYDSLRFPHKVEAQEADGSVKFGHGDGSAYLFD 374

Query: 387 PDIFTDGRISVQGIDGVLFPMEEAPEEVKPDSQTGQP-AKVVVKHRRGKLLEAACKMLGT 445
           PDI+TDGRISVQGIDGVLFP E+ P E K    TG P  K   K RRGKL+E AC MLG 
Sbjct: 375 PDIYTDGRISVQGIDGVLFPEEKTPVEKK----TGVPVVKKAPKPRRGKLMEVACTMLG- 429

Query: 446 FGQHSRFSSCQ 456
               S+F +CQ
Sbjct: 430 ----SQFPTCQ 436


>AT5G05650.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: FASCICLIN-like arabinogalactan protein 17 precursor
           (TAIR:AT5G06390.1); Has 1807 Blast hits to 1807 proteins
           in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
           Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
           - 339 (source: NCBI BLink). | chr5:1686532-1686909
           REVERSE LENGTH=125
          Length = 125

 Score =  114 bits (286), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 4/92 (4%)

Query: 317 EQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVNYDTLRLPHKVVAKEADGSVKFG 376
           +QLSE    +QI YYH+IPEYQTE+S Y  VRR G + +DT   PH + A+E   S+KFG
Sbjct: 2   DQLSE----KQIWYYHIIPEYQTEKSFYACVRRSGMIKFDTFYFPHMLSARETQRSIKFG 57

Query: 377 HGDGSAYLFDPDIFTDGRISVQGIDGVLFPME 408
            G  S  L+DPDI+TDG+IS+QG+ GVLFP E
Sbjct: 58  DGVWSGCLYDPDIYTDGKISIQGVGGVLFPRE 89