Miyakogusa Predicted Gene

Lj3g3v1294550.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1294550.1 NODE_50713_length_1282_cov_26.011700.path1.1
         (360 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G44160.1 | Symbols:  | Outer membrane OMP85 family protein | ...   610   e-175
AT3G48620.1 | Symbols:  | Outer membrane OMP85 family protein | ...   322   2e-88
AT5G19620.1 | Symbols: EMB213, OEP80, ATOEP80, TOC75 | outer env...   232   3e-61
AT3G46740.1 | Symbols: TOC75-III, MAR1 | translocon at the outer...    79   7e-15
AT4G09080.1 | Symbols: TOC75-IV, ATTOC75-IV | Outer membrane OMP...    71   1e-12

>AT3G44160.1 | Symbols:  | Outer membrane OMP85 family protein |
           chr3:15889225-15891814 REVERSE LENGTH=362
          Length = 362

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 293/360 (81%), Positives = 323/360 (89%)

Query: 1   MGAQKSIHAGKAKIDVNVDFTHKLCASLMFPTLRSYENPLRLVIGSLCIKHPNLFGGSEK 60
           MGAQKSIHAG+AKIDVNVDFTHKLC SLMFP  R   +PL LVIGSLCIKHPNLFGGSEK
Sbjct: 1   MGAQKSIHAGRAKIDVNVDFTHKLCTSLMFPAFRDTSSPLSLVIGSLCIKHPNLFGGSEK 60

Query: 61  LDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVN 120
           LDVSWDKGLYDSN+LVA+RRPRPEW  QQ F +QHSLSPEI VHG P++NFSRSGSGGVN
Sbjct: 61  LDVSWDKGLYDSNVLVAFRRPRPEWRPQQCFFIQHSLSPEIGVHGTPVDNFSRSGSGGVN 120

Query: 121 LSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLTCSGSTHDSMVV 180
           LSKL++GLDL EP S+KWSSTTSIKFEHVRP+NDDGRAI+RD DGFP+TCSG+THDSMVV
Sbjct: 121 LSKLALGLDLSEPASSKWSSTTSIKFEHVRPINDDGRAITRDLDGFPITCSGNTHDSMVV 180

Query: 181 LKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGG 240
           LKQESRFAKA D+   HF++QIEQGIPV+SKW++FNRFKFVASKGV+ GPAFLL  LTGG
Sbjct: 181 LKQESRFAKATDQGLSHFSMQIEQGIPVVSKWLIFNRFKFVASKGVRFGPAFLLASLTGG 240

Query: 241 SIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTD 300
           SIVGDMAPYQAF++GGLGSVRGYGEGAVGSGRSCLVAN+EL LPL KM EG IFLDCGTD
Sbjct: 241 SIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGRSCLVANTELALPLNKMTEGTIFLDCGTD 300

Query: 301 LRTGHLVPGNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360
           L +  LVPGNP++RQGKPG G G GYGLRFKS  GH QVDYA+NAF QKTLYFG++NLAS
Sbjct: 301 LGSSRLVPGNPSMRQGKPGFGYGFGYGLRFKSPLGHLQVDYAINAFNQKTLYFGVTNLAS 360


>AT3G48620.1 | Symbols:  | Outer membrane OMP85 family protein |
           chr3:18016175-18017750 FORWARD LENGTH=321
          Length = 321

 Score =  322 bits (825), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 184/299 (61%), Positives = 206/299 (68%), Gaps = 50/299 (16%)

Query: 108 INNFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTSIKFE------------HVRPLNDD 155
           + N + S SGGVNLSKL+VGLDL EP S+KWSSTTS+KFE             VR    D
Sbjct: 25  VRNSASSYSGGVNLSKLAVGLDLSEPASSKWSSTTSVKFEVPGHYLLQTLYMCVRLTMTD 84

Query: 156 GR-----AISRDYDGFPLTCSGSTHDSMVVLKQESRFAKANDRSFFHFNLQIEQGIPVLS 210
           GR      IS +     L CSG+THDSMVVLKQESRFAKA D+   HF++QIEQGIPV+S
Sbjct: 85  GRYQRSGRISYNMQN-SLLCSGNTHDSMVVLKQESRFAKATDQGLSHFSMQIEQGIPVVS 143

Query: 211 KWILFNRFKFVASKGVKLGPAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGS 270
            W++FNRFKFVASKGV+ GPAF L  LTGGSIVGDM PYQAF++GGLGSVRGYGE AVGS
Sbjct: 144 NWLIFNRFKFVASKGVRFGPAFPLASLTGGSIVGDMTPYQAFAIGGLGSVRGYGEVAVGS 203

Query: 271 GRSCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVP---------------------- 308
           GRSCLVAN+EL     KM EG IFLDCGTDL +  LVP                      
Sbjct: 204 GRSCLVANTELA---NKMTEGTIFLDCGTDLGSSRLVPVSSLYLLRTRTIKKLLRHENDK 260

Query: 309 -------GNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS 360
                  GNP+LRQGKPG G G GYGLRFKS  GH QVDYA+NAF QKTLYFG++NLAS
Sbjct: 261 AVAELVSGNPSLRQGKPGFGYGFGYGLRFKSPLGHLQVDYAMNAFNQKTLYFGITNLAS 319


>AT5G19620.1 | Symbols: EMB213, OEP80, ATOEP80, TOC75 | outer
           envelope protein of 80 kDa | chr5:6623323-6627641
           FORWARD LENGTH=732
          Length = 732

 Score =  232 bits (592), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 186/323 (57%), Gaps = 15/323 (4%)

Query: 39  PLRLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWL------AQQSFV 92
           PL  +IGS    H NLFG ++KL+VS ++G  DS   + Y  P   W+        +S +
Sbjct: 415 PLSGLIGSFAYSHRNLFGRNQKLNVSLERGQIDSIFRINYTDP---WIEGDDKRTSRSIM 471

Query: 93  LQHSLSPEIAVHGIPINNFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPL 152
           +Q+S +P   VHG   +N S      + + +++ G++   P   KW+ T  + F+H    
Sbjct: 472 VQNSRTPGNLVHGNQPDNSS------LTIGRVTAGVEYSRPFRPKWNGTAGLIFQHAGAR 525

Query: 153 NDDGRAISRDYDGFPLTCSGSTHDSMVVLKQESRFAKANDRSFFHFNLQIEQGIPVLSKW 212
           ++ G  I +D+   PLT SG  HD  ++ K ES +  + D+    F   +EQG+PVL +W
Sbjct: 526 DEQGNPIIKDFYSSPLTASGKPHDETMLAKLESIYTGSGDQGSTMFAFNMEQGLPVLPEW 585

Query: 213 ILFNRFKFVASKGVKLGPAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGR 272
           + FNR    A KG+ +GPA  L  L+GG +VG  +P++AF +GG  SVRGY EGAVGSGR
Sbjct: 586 LCFNRVTGRARKGIHIGPARFLFSLSGGHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGR 645

Query: 273 SCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVPGNPALRQGKPGSGVGLGYGLRFKS 332
           S +V + EL+ P+   +EG IF D GTD+ +G  VPG+PA  + KPGSG G G G+R  S
Sbjct: 646 SYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDS 705

Query: 333 QFGHFQVDYAVNAFQQKTLYFGL 355
             G  +++YA N       +FG+
Sbjct: 706 PLGPLRLEYAFNDQHAGRFHFGV 728


>AT3G46740.1 | Symbols: TOC75-III, MAR1 | translocon at the outer
           envelope membrane of chloroplasts 75-III |
           chr3:17216104-17219296 REVERSE LENGTH=818
          Length = 818

 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 40/253 (15%)

Query: 110 NFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAISRDYDGFPLT 169
           NF+R        SK + GL ++E  +   SS  +   + + P       IS   DG P T
Sbjct: 572 NFTRQ-------SKFTYGLVMEEITTRDESSHIAANGQRLLPSG----GIS--ADGPPTT 618

Query: 170 CSGSTHDSMVVL-----KQESRF---AKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFV 221
            SG+  D M  L     +  ++F   A    R+ F    Q++QG+ + SK+  FNR +  
Sbjct: 619 LSGTGVDRMAFLQANITRDNTKFVNGAVVGQRTVF----QVDQGLGIGSKFPFFNRHQLT 674

Query: 222 ASKGVKL----------GPAFLLTRLTGGSIVGDMAPYQAFSVGGLGSVRGYGEGAVGSG 271
            +K ++L           P  L+     G  VGD+  Y AF +GG  SVRGY  G +G+ 
Sbjct: 675 MTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAA 734

Query: 272 RSCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVPGNPALRQGKPGSGVGLGYGLRFK 331
           R+     +E+ +P+ K      F++ G DL +   V GNP     + G G   G G++  
Sbjct: 735 RNIAEVGAEIRIPV-KNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVK-- 791

Query: 332 SQFGHFQVDYAVN 344
              G  + +YAV+
Sbjct: 792 --LGLVRAEYAVD 802


>AT4G09080.1 | Symbols: TOC75-IV, ATTOC75-IV | Outer membrane OMP85
           family protein | chr4:5804451-5806093 FORWARD LENGTH=396
          Length = 396

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 148/335 (44%), Gaps = 60/335 (17%)

Query: 43  VIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRRPRPEWLAQQSFVLQHSLSPEIA 102
           ++GS+ I+  N+F  + KLD    K  Y    L A ++PR     + SF     LSP   
Sbjct: 71  LMGSVTIR--NIF--NPKLDDLLSKIEY-VRFLEAVKKPRNRTF-KTSFFNSRKLSPVFT 124

Query: 103 VHGIPINNFSRSGSGGVNL-SKLSVGLD-----LKEPMSTKWSSTTSIKFEHV------R 150
                       G G  +L   + VG D     + E ++ +   T  + FE +      R
Sbjct: 125 -----------GGPGYEDLVPPMFVGRDCLKATITENLTRQRELTYGVMFEEIITRDENR 173

Query: 151 PLNDDGRAISRD----YDGFPLTCSGSTHDSMVVL-----KQESRF---AKANDRSFFHF 198
            ++++G  +S D     +G P T SG+  D +  L     +  ++    A   +++ F  
Sbjct: 174 RISENGLLLSPDGGISINGPPTTLSGTGIDHIATLQANITRDNTKLVNGAVVGEKNIF-- 231

Query: 199 NLQIEQGIPVLSKWILFNRFK-----FVASKGVKLG-----PAFLLTRLTGGSIVGDMAP 248
             Q++QG+ + + + LFNR +     F+  K V+ G     P  L+     G  +GD+  
Sbjct: 232 --QVDQGLGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCIGDLPS 289

Query: 249 YQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVP 308
           Y  F++GG  SVRGY  G +G+ ++ L   +E+ +P+ K      F + G DL +   V 
Sbjct: 290 YDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPV-KNTHVYAFAEHGNDLGSSKDVK 348

Query: 309 GNPALRQGKPGSGVGLGYGLRFKSQFGHFQVDYAV 343
           GNP     K G G   G G++     G  + +Y V
Sbjct: 349 GNPTGLYRKMGHGSSYGLGVK----LGMVRAEYTV 379