Miyakogusa Predicted Gene
- Lj3g3v1262240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1262240.1 Non Chatacterized Hit- tr|Q0WVQ5|Q0WVQ5_ARATH
Putative uncharacterized protein At1g64625 OS=Arabidop,54.76,3e-19,GB
DEF: BHLH TRANSCRIPTION FACTOR,NULL; SERINE/THREONINE-PROTEIN KINASE
WNK (WITH NO
LYSINE)-RELATED,NODE_36847_length_1039_cov_246.334930.path1.1
(107 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G27230.2 | Symbols: LHW | transcription factor-related | chr2... 146 2e-36
AT2G27230.1 | Symbols: LHW | transcription factor-related | chr2... 146 2e-36
AT1G64625.1 | Symbols: | Serine/threonine-protein kinase WNK (W... 101 1e-22
AT1G64625.2 | Symbols: | Serine/threonine-protein kinase WNK (W... 101 1e-22
AT1G64625.3 | Symbols: | Serine/threonine-protein kinase WNK (W... 100 1e-22
AT1G06150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-bind... 78 1e-15
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 77 3e-15
AT2G31280.1 | Symbols: CPUORF7 | conserved peptide upstream open... 74 2e-14
AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open... 69 6e-13
AT2G31280.2 | Symbols: CPUORF7 | conserved peptide upstream open... 54 3e-08
>AT2G27230.2 | Symbols: LHW | transcription factor-related |
chr2:11650895-11653840 FORWARD LENGTH=650
Length = 650
Score = 146 bits (369), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 79/94 (84%)
Query: 1 MVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAV 60
MVCPI+VED+NPPR VEMLCE+RGFFLEIAD IR LGLTILKGV+E R DKIWARF V
Sbjct: 541 MVCPIVVEDINPPRIFQVEMLCEQRGFFLEIADWIRSLGLTILKGVIETRVDKIWARFTV 600
Query: 61 EANRDVTRMEIFMSLVQLVEQTVKGGASSSNAVD 94
EA+RDVTRMEIFM LV ++EQT+K G +S +D
Sbjct: 601 EASRDVTRMEIFMQLVNILEQTMKCGGNSKTILD 634
>AT2G27230.1 | Symbols: LHW | transcription factor-related |
chr2:11650895-11653840 FORWARD LENGTH=650
Length = 650
Score = 146 bits (369), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/94 (73%), Positives = 79/94 (84%)
Query: 1 MVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAV 60
MVCPI+VED+NPPR VEMLCE+RGFFLEIAD IR LGLTILKGV+E R DKIWARF V
Sbjct: 541 MVCPIVVEDINPPRIFQVEMLCEQRGFFLEIADWIRSLGLTILKGVIETRVDKIWARFTV 600
Query: 61 EANRDVTRMEIFMSLVQLVEQTVKGGASSSNAVD 94
EA+RDVTRMEIFM LV ++EQT+K G +S +D
Sbjct: 601 EASRDVTRMEIFMQLVNILEQTMKCGGNSKTILD 634
>AT1G64625.1 | Symbols: | Serine/threonine-protein kinase WNK (With
No Lysine)-related | chr1:24016878-24019181 FORWARD
LENGTH=527
Length = 527
Score = 101 bits (251), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 1 MVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAV 60
+VCPI+VE+LN +M +EM+CEER FLEI ++RGLGL ILKGVME R +IWA F V
Sbjct: 438 VVCPIMVEELNREGEMQIEMVCEEREEFLEIGQVVRGLGLKILKGVMETRKGQIWAHFIV 497
Query: 61 EANRDVTRMEIFMSLVQLVEQTVK 84
+A VTR+++ SLVQL + K
Sbjct: 498 QAKPQVTRIQVLYSLVQLFQHHTK 521
>AT1G64625.2 | Symbols: | Serine/threonine-protein kinase WNK (With
No Lysine)-related | chr1:24016878-24019181 FORWARD
LENGTH=517
Length = 517
Score = 101 bits (251), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 1 MVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAV 60
+VCPI+VE+LN +M +EM+CEER FLEI ++RGLGL ILKGVME R +IWA F V
Sbjct: 428 VVCPIMVEELNREGEMQIEMVCEEREEFLEIGQVVRGLGLKILKGVMETRKGQIWAHFIV 487
Query: 61 EANRDVTRMEIFMSLVQLVEQTVK 84
+A VTR+++ SLVQL + K
Sbjct: 488 QAKPQVTRIQVLYSLVQLFQHHTK 511
>AT1G64625.3 | Symbols: | Serine/threonine-protein kinase WNK (With
No Lysine)-related | chr1:24016878-24019181 FORWARD
LENGTH=503
Length = 503
Score = 100 bits (250), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/84 (55%), Positives = 61/84 (72%)
Query: 1 MVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAV 60
+VCPI+VE+LN +M +EM+CEER FLEI ++RGLGL ILKGVME R +IWA F V
Sbjct: 414 VVCPIMVEELNREGEMQIEMVCEEREEFLEIGQVVRGLGLKILKGVMETRKGQIWAHFIV 473
Query: 61 EANRDVTRMEIFMSLVQLVEQTVK 84
+A VTR+++ SLVQL + K
Sbjct: 474 QAKPQVTRIQVLYSLVQLFQHHTK 497
>AT1G06150.2 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding
superfamily protein | chr1:1869228-1873194 REVERSE
LENGTH=734
Length = 734
Score = 78.2 bits (191), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 2 VCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVE 61
VC I+VE+L+ ML+EMLCEE FLEIA++IR L L IL+G E + +K W F VE
Sbjct: 648 VCSIMVENLDKEGVMLIEMLCEECSHFLEIANVIRSLELIILRGTTEKQGEKTWICFVVE 707
Query: 62 A--NRDVTRMEIFMSLVQLVE 80
N+ + RM+I SLVQ+ +
Sbjct: 708 GQNNKVMHRMDILWSLVQIFQ 728
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 76.6 bits (187), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 2 VCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVE 61
VC I+VE+L+ ML+EMLCEE FLEIA++IR L L IL+G E + +K W F VE
Sbjct: 648 VCSIMVENLDKEGVMLIEMLCEECSHFLEIANVIRSLELIILRGTTEKQGEKTWICFVVE 707
Query: 62 A--NRDVTRMEIFMSLVQLVE 80
N+ + RM+I SLVQ+ +
Sbjct: 708 GQNNKVMHRMDILWSLVQIFQ 728
>AT2G31280.1 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339678-13343424 FORWARD
LENGTH=720
Length = 720
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 2 VCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVE 61
V IIVE+LN +L+EMLCEE G FLEIA++IR L L IL+G E + +K W F E
Sbjct: 633 VSSIIVENLNKQGMVLIEMLCEECGHFLEIANVIRSLDLVILRGFTETQGEKTWICFVTE 692
Query: 62 ANRD--VTRMEIFMSLVQLVE 80
+ + RM+I SLVQ+ +
Sbjct: 693 SQNSKVMQRMDILWSLVQIFQ 713
>AT2G31280.3 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339678-13343424 FORWARD
LENGTH=737
Length = 737
Score = 69.3 bits (168), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 52/98 (53%), Gaps = 19/98 (19%)
Query: 2 VCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEARNDKIWARFAVE 61
V IIVE+LN +L+EMLCEE G FLEIA++IR L L IL+G E + +K W F E
Sbjct: 633 VSSIIVENLNKQGMVLIEMLCEECGHFLEIANVIRSLDLVILRGFTETQGEKTWICFVTE 692
Query: 62 ANRDVT-------------------RMEIFMSLVQLVE 80
+T RM+I SLVQ+ +
Sbjct: 693 VGSRITQFMKEIPKQIKSQNSKVMQRMDILWSLVQIFQ 730
>AT2G31280.2 | Symbols: CPUORF7 | conserved peptide upstream open
reading frame 7 | chr2:13339430-13343309 FORWARD
LENGTH=723
Length = 723
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 24/91 (26%)
Query: 2 VCPIIVEDLNPPRQMLVE------------------------MLCEERGFFLEIADLIRG 37
V IIVE+LN +L+E MLCEE G FLEIA++IR
Sbjct: 605 VSSIIVENLNKQGMVLIEFNLCLNSSPKFCECVLKVFLGIGQMLCEECGHFLEIANVIRS 664
Query: 38 LGLTILKGVMEARNDKIWARFAVEANRDVTR 68
L L IL+G E + +K W F E +T+
Sbjct: 665 LDLVILRGFTETQGEKTWICFVTEVGSRITQ 695