Miyakogusa Predicted Gene
- Lj3g3v1261190.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1261190.1 tr|Q2HSH7|Q2HSH7_MEDTR Histone deacetylase
OS=Medicago truncatula GN=MTR_2g087270 PE=4
SV=1,86.23,0,Arginase/deacetylase,NULL; HDASUPER,Histone deacetylase
superfamily; no description,Histone deacetyl,CUFF.42389.1
(385 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase... 516 e-146
AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 | chr5:2456... 133 2e-31
AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 132 4e-31
AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |... 132 5e-31
AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase... 130 1e-30
AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |... 130 2e-30
AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of t... 126 2e-29
AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 | h... 92 5e-19
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | chr... 89 4e-18
AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone ... 83 3e-16
AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |... 83 3e-16
AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 | chr5:137701... 62 5e-10
>AT1G08460.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8
| chr1:2672527-2674469 FORWARD LENGTH=377
Length = 377
Score = 516 bits (1328), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/374 (64%), Positives = 296/374 (79%), Gaps = 2/374 (0%)
Query: 12 MVNRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNMVSILKRGPISPY 71
+ NRVDVFWHEGML HD GVFD+G +PGFLDVLEKHPEN+DRV+NM+SIL+RGPI+P+
Sbjct: 2 VTNRVDVFWHEGMLRHDAVEGVFDTGYDPGFLDVLEKHPENADRVRNMLSILRRGPIAPH 61
Query: 72 ISWNIGRSALIHELHSFHSPEYVNELVEADKEGGKT-LCSGTFLNPGSWDXXXXXXGTTL 130
++W G A++ EL FH+ EY+ +LVEADK G + + +GTF++PGSW+ GTTL
Sbjct: 62 VNWFTGLPAIVSELLMFHTSEYIEKLVEADKSGERCEIAAGTFMSPGSWEAALLAAGTTL 121
Query: 131 SSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLALDSG-CKKVAVIDI 189
S+M+H+LD +GK+AYALVRPPGHH+QP+QADGYCFLNNA LAV+LAL+SG C +VAVIDI
Sbjct: 122 SAMQHILDCHGKIAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVIDI 181
Query: 190 DVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNG 249
DVHYGNGTAEGFY SDKVLT+SLHMNHGSWG SHPQ GS+D +PLPNG
Sbjct: 182 DVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLPNG 241
Query: 250 TGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGL 309
TGD+GY YA NELVVP++++FGPD++VLV+GQDSSAFDPNGRQ LTM GYR IG+I+ G+
Sbjct: 242 TGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMRGV 301
Query: 310 AAKHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXXXXIAYYPEDETFPVKVIE 369
A +HS GRLL+VQEGGYHVTY+AYCLHA LEGV IAYYPE+E V +E
Sbjct: 302 AEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEPHLSDPIAYYPEEEANAVAAVE 361
Query: 370 AIKNYMKDEVHLWK 383
+IK Y + V +
Sbjct: 362 SIKTYHTEFVPFLR 375
>AT5G61060.2 | Symbols: HDA05 | histone deacetylase 5 |
chr5:24567137-24570917 REVERSE LENGTH=664
Length = 664
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 174/380 (45%), Gaps = 42/380 (11%)
Query: 14 NRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNMVSILKRGPISPYIS 73
+V + + E M HDT G E HPE DR++ + L+ +S
Sbjct: 25 RKVGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCV 70
Query: 74 WNIGRSALIHELHSFHSPEYVNELVEADKEGGK--------TLCSGTFLNPGSWDXXXXX 125
A L H+ ++VN LV++ K + + +LN GS +
Sbjct: 71 VLGSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLA 129
Query: 126 XGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLAL----DSGC 181
G+ + + + +G +A+VRPPGHHA+ +A G+C NN +A L D G
Sbjct: 130 AGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGV 189
Query: 182 KKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHM-NHGSWGPSHPQSGSVDXXXXXXXXXX 240
KK+ ++D DVH+GNGT + F++ +VL S+H +G + P+ G +
Sbjct: 190 KKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAG-DDGDYNMVGEGPGEGF 248
Query: 241 XXXIPLPNG-TGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGY 299
+P G GD Y+ A++ +++P ++F PD+I L G D++ DP G C+T GY
Sbjct: 249 NINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGY 308
Query: 300 REIGRIVHGLAAKHSDGRLLIVQEGGYHV----TYSAYCLHATLEGVXXXXXXXXXXXIA 355
+ + V + + G++++ EGGY++ S C+ LE
Sbjct: 309 SVMLKKVGVELMEFAQGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEA----- 363
Query: 356 YYPEDETFPVKVIEAIKNYM 375
YP + T+ +VI+A++ +
Sbjct: 364 -YPFESTW--RVIQAVRKRL 380
>AT3G18520.1 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365367 FORWARD LENGTH=552
Length = 552
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 8/284 (2%)
Query: 47 EKHPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGG 105
+ HPE DR++ + + L + P I R EL H+ E+V+ + +
Sbjct: 169 QPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDTTSQLLY 228
Query: 106 KTLCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCF 165
S T+ N S G + G K +ALVRPPGHHA A G+C
Sbjct: 229 SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCL 288
Query: 166 LNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQ 225
NNA +A +A +G KKV ++D DVH+GNGT E F ++ VL ISLH + G G +P
Sbjct: 289 HNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEG--GNFYPG 346
Query: 226 SGSVDXXXXXXXXXXXXXIPLP-NGTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSS 284
+G+ D +P G GDK Y++AF +V+P F PD +++ G D++
Sbjct: 347 TGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAA 406
Query: 285 AFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
DP G +T GY + +++ L G++L++ EGGY++
Sbjct: 407 RGDPLGCCDVTPAGYSRMTQMLGDLCG----GKMLVILEGGYNL 446
>AT3G18520.2 | Symbols: HDA15, ATHDA15 | histone deacetylase 15 |
chr3:6361605-6365399 FORWARD LENGTH=564
Length = 564
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 140/284 (49%), Gaps = 8/284 (2%)
Query: 47 EKHPENSDRVKNMVSILKRGPISPYISWNI-GRSALIHELHSFHSPEYVNELVEADKEGG 105
+ HPE DR++ + + L + P I R EL H+ E+V+ + +
Sbjct: 169 QPHPERPDRLRAIAASLATAGVFPGRCLPINAREITKQELQMVHTSEHVDAVDTTSQLLY 228
Query: 106 KTLCSGTFLNPGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCF 165
S T+ N S G + G K +ALVRPPGHHA A G+C
Sbjct: 229 SYFTSDTYANEYSARAARLAAGLCADLATDIFTGRVKNGFALVRPPGHHAGVRHAMGFCL 288
Query: 166 LNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQ 225
NNA +A +A +G KKV ++D DVH+GNGT E F ++ VL ISLH + G G +P
Sbjct: 289 HNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISLHRHEG--GNFYPG 346
Query: 226 SGSVDXXXXXXXXXXXXXIPLP-NGTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSS 284
+G+ D +P G GDK Y++AF +V+P F PD +++ G D++
Sbjct: 347 TGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPDFVIISAGFDAA 406
Query: 285 AFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
DP G +T GY + +++ L G++L++ EGGY++
Sbjct: 407 RGDPLGCCDVTPAGYSRMTQMLGDLCG----GKMLVILEGGYNL 446
>AT5G61060.1 | Symbols: HDA05, HDA5, ATHDA5 | histone deacetylase 5
| chr5:24567137-24570917 REVERSE LENGTH=660
Length = 660
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 173/380 (45%), Gaps = 46/380 (12%)
Query: 14 NRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNMVSILKRGPISPYIS 73
+V + + E M HDT G E HPE DR++ + L+ +S
Sbjct: 25 RKVGLIYDETMCKHDTPDG--------------EDHPECPDRIRVIWEKLQLAGVSQRCV 70
Query: 74 WNIGRSALIHELHSFHSPEYVNELVEADKEGGK--------TLCSGTFLNPGSWDXXXXX 125
A L H+ ++VN LV++ K + + +LN GS +
Sbjct: 71 VLGSSKAEDKHLQLVHTKDHVN-LVKSISTKQKDYRRNRIASQLNSIYLNGGSSEAAYLA 129
Query: 126 XGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLAL----DSGC 181
G+ + + + +G +A+VRPPGHHA+ +A G+C NN +A L D G
Sbjct: 130 AGSVVKLAEKVAEGELDCGFAIVRPPGHHAEADEAMGFCLFNNVAVAASFLLNERPDLGV 189
Query: 182 KKVAVIDIDVHYGNGTAEGFYRSDKVLTISLHM-NHGSWGPSHPQSGSVDXXXXXXXXXX 240
KK+ ++D DVH+GNGT + F++ +VL S+H +G + P+ G +
Sbjct: 190 KKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAG-DDGDYNMVGEGPGEGF 248
Query: 241 XXXIPLPNG-TGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGY 299
+P G GD Y+ A++ +++P ++F PD+I L G D++ DP G C+T GY
Sbjct: 249 NINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDAAINDPLGGCCVTPYGY 308
Query: 300 REIGRIVHGLAAKHSDGRLLIVQEGGYHV----TYSAYCLHATLEGVXXXXXXXXXXXIA 355
+ + + A G++++ EGGY++ S C+ LE
Sbjct: 309 SVMLKKLMEFA----QGKIVLALEGGYNLDSIAKSSLACVQVLLEDKQIQGPPEA----- 359
Query: 356 YYPEDETFPVKVIEAIKNYM 375
YP + T+ +VI+A++ +
Sbjct: 360 -YPFESTW--RVIQAVRKRL 376
>AT4G33470.1 | Symbols: hda14, ATHDA14 | histone deacetylase 14 |
chr4:16102774-16105439 REVERSE LENGTH=423
Length = 423
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 138/300 (46%), Gaps = 23/300 (7%)
Query: 47 EKHPENSDRVKNMVSILKRGPISP------YISWNIGRSALIHELHSFHSPEYVNELVEA 100
E HPE S RV +V+ L+ ++P + ++A + ++ + H YV L +A
Sbjct: 78 ESHPECSARVPAIVNALEMNELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKA 137
Query: 101 DKEG---GKTLCSG---TFLNPGSWDXXXXXXGTTLSSMKHLLDGNGK-----VAYALVR 149
E G G T+ ++ G ++ + ++ + + +AL+R
Sbjct: 138 MDEASDSGLIFIEGSGPTYATSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIR 197
Query: 150 PPGHHAQPSQADGYCFLNNAGLAVQLALDS-GCKKVAVIDIDVHYGNGTAEGFYRSDKVL 208
PPGHHA P G+C N +A + A + G K++ +ID DVH+GNGT + F +
Sbjct: 198 PPGHHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIF 257
Query: 209 TISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQ 268
+S H + S+P +G + +PLP G+GD F E++VP Q
Sbjct: 258 FLSTHQDG-----SYPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQ 312
Query: 269 KFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
+F PDII++ G D+ DP T Y + + + LA + GR + EGGY++
Sbjct: 313 RFKPDIILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNL 372
>AT5G61070.1 | Symbols: HDA18, ATHDA18 | histone deacetylase of the
RPD3/HDA1 superfamily 18 | chr5:24571297-24574372
REVERSE LENGTH=682
Length = 682
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 173/383 (45%), Gaps = 52/383 (13%)
Query: 14 NRVDVFWHEGMLNHDTGHGVFDSGINPGFLDVLEKHPENSDRVKNMVSILKRGPISPYIS 73
+V + + E M HDT +G D E DR++ + L+ ++
Sbjct: 58 RKVGLVYDETMCKHDTPNGKVDV--------------ECPDRIRVIWEKLQLAGVTQRCV 103
Query: 74 WNIGRSALIHELHSFHSPEYVN--ELVEADKEGGK-----TLCSGTFLNPGSWDXXXXXX 126
G A L H+ ++VN + + K+ + + +LN GS +
Sbjct: 104 VLGGSKAEDKHLKLVHTKKHVNLVKSISTKKKDSRRNKIASQLDSIYLNGGSSEAAYLAA 163
Query: 127 GTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQLAL----DSGCK 182
G+ + + + +G +A+VRPPGHHA+ +A G+C NN +A L D K
Sbjct: 164 GSVVKVAEKVAEGELDCGFAIVRPPGHHAESDEAMGFCLFNNVAVAASFLLNERPDLDVK 223
Query: 183 KVAVIDIDVHYGNGTAEGFYRSDKVLTISLHM-NHGSWGPSHPQSGSVDXXXXXXXXXXX 241
K+ ++D D+H+GNGT + F++ +VL S+H +HGS+ P G +
Sbjct: 224 KILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYP-FGDDGDFNMVGEGPGEGFN 282
Query: 242 XXIPLPN-GTGDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYR 300
+P G GD Y+ +N +++P ++F PDII+L G D++ DP G C+T GY
Sbjct: 283 INVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCCVTPYGYS 342
Query: 301 EIGRIVHGLAAKHSDGRLLIVQEGGYHV----TYSAYCLHATLEGVXXXXXXXXXXXIAY 356
+ + + A G++++ EGGY++ S C+ LE
Sbjct: 343 VMLKKLMEFA----HGKIVLALEGGYNLESLGKSSLACVQVLLEDKQ------------I 386
Query: 357 YPEDETFPV----KVIEAIKNYM 375
+ ET+P+ +VI+A++ +
Sbjct: 387 HGSSETYPLESTRRVIQAVRERL 409
>AT5G63110.1 | Symbols: HDA6, AXE1, ATHDA6, RTS1, RPD3B, SIL1 |
histone deacetylase 6 | chr5:25315834-25318227 REVERSE
LENGTH=471
Length = 471
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 120/264 (45%), Gaps = 26/264 (9%)
Query: 84 ELHSFHSPEYVNELVEADKEGGKTLCSGTFLN-----------PGSWDXXXXXXGTTLSS 132
++ FHSPEYV+ L E + L G +D G ++ +
Sbjct: 73 DIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGA 132
Query: 133 MKHLLDGNGKVAYALVRPPG--HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDID 190
L + +A + G HHA+ S+A G+C++N+ L + L L K+V IDID
Sbjct: 133 AVKLNRQDADIA---INWGGGLHHAKKSEASGFCYVNDIVLGI-LELLKMFKRVLYIDID 188
Query: 191 VHYGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGT 250
VH+G+G E FY +D+V+T+S H +G P +G + +PL +G
Sbjct: 189 VHHGDGVEEAFYTTDRVMTVSFH----KFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGM 244
Query: 251 GDKGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLA 310
D+ + F L+ ++ + P+ +VL G DS + D G L+++G+ + R +
Sbjct: 245 DDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYN 304
Query: 311 AKHSDGRLLIVQEGGYHVTYSAYC 334
L+++ GGY + A C
Sbjct: 305 VP-----LMVLGGGGYTIRNVARC 323
>AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
chr3:16226769-16229752 REVERSE LENGTH=426
Length = 426
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 114/262 (43%), Gaps = 23/262 (8%)
Query: 84 ELHSFHSPEYVNELVEADKEGGK---------TLCSGTFLNPGSWDXXXXXXGTTLSSMK 134
E+ FHSP+YV L + E L + ++ G T+ + +
Sbjct: 59 EMAQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAAR 118
Query: 135 HLLDGNGKVAYALVRPPG--HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVH 192
L N K+ + G HHA+ A G+C++N+ L + L L +V IDIDVH
Sbjct: 119 RL---NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGI-LELLKHHPRVLYIDIDVH 174
Query: 193 YGNGTAEGFYRSDKVLTISLHMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGD 252
+G+G E FY +D+V+T+S H + P +G V +PL +G D
Sbjct: 175 HGDGVEEAFYFTDRVMTVSFHKFGDKFFPG---TGDVKEIGEREGKFYAINVPLKDGIDD 231
Query: 253 KGYVYAFNELVVPSIQKFGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAK 312
+ F ++ ++ + P IVL G DS A D G L+++G+ E + V K
Sbjct: 232 SSFNRLFRTIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFV-----K 286
Query: 313 HSDGRLLIVQEGGYHVTYSAYC 334
+ LL+ GGY A C
Sbjct: 287 KFNLPLLVTGGGGYTKENVARC 308
>AT4G38130.2 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19 | histone
deacetylase 1 | chr4:17896663-17899057 REVERSE
LENGTH=469
Length = 469
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HHA+ +A G+C++N+ LA+ L L ++V +DID+H+G+G E FY +D+V+T+S
Sbjct: 148 HHAKKCEASGFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSF 206
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGP 272
H +G P +G + +PL +G D+ Y F ++ ++ F P
Sbjct: 207 H----KFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRP 262
Query: 273 DIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGL 309
+VL G DS + D G L+++G+ E + +
Sbjct: 263 GAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF 299
>AT4G38130.1 | Symbols: HD1, ATHD1, HDA1, RPD3A, HDA19, ATHDA19 |
histone deacetylase 1 | chr4:17896493-17899057 REVERSE
LENGTH=501
Length = 501
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HHA+ +A G+C++N+ LA+ L L ++V +DID+H+G+G E FY +D+V+T+S
Sbjct: 148 HHAKKCEASGFCYVNDIVLAI-LELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSF 206
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQKFGP 272
H +G P +G + +PL +G D+ Y F ++ ++ F P
Sbjct: 207 H----KFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRP 262
Query: 273 DIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGL 309
+VL G DS + D G L+++G+ E + +
Sbjct: 263 GAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSF 299
>AT5G35600.1 | Symbols: HDA7 | histone deacetylase7 |
chr5:13770121-13771712 REVERSE LENGTH=409
Length = 409
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 22/186 (11%)
Query: 153 HHAQPSQADGYCFLNNAGLAVQLALDSGCKKVAVIDIDVHYGNGTAEGFYRSDKVLTISL 212
HH + +A G+ ++N+ LA+ L L K+V I+I +G+ E F +D+V+T+S
Sbjct: 147 HHVKKDKASGFGYVNDVVLAI-LELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSF 205
Query: 213 HMNHGSWGPSHPQSGSVDXXXXXXXXXXXXXIPLPNGTGDKGYVYAFNELVVPSIQK--- 269
H +G + PL +G D ++ L +P I +
Sbjct: 206 H--------KVGDTGDISDYGEGKGQYYSLNAPLKDGLDD----FSLRGLFIPVIHRAME 253
Query: 270 -FGPDIIVLVIGQDSSAFDPNGRQCLTMEGYREIGRIVHGLAAKHSDGRLLIVQEGGYHV 328
+ P++IVL G DS A DP G L+++G+ + + V L+I+ GGY +
Sbjct: 254 IYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVP-----LMILGGGGYTL 308
Query: 329 TYSAYC 334
A C
Sbjct: 309 PNVARC 314