Miyakogusa Predicted Gene

Lj3g3v1238790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1238790.1 tr|F2DVP6|F2DVP6_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,32.52,0.00000004,SUBFAMILY
NOT NAMED,NULL; CASEIN
KINASE-RELATED,NULL,NODE_48898_length_1012_cov_135.481232.path1.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G03940.1 | Symbols:  | Protein kinase family protein | chr3:1...   294   2e-80
AT2G25760.2 | Symbols:  | Protein kinase family protein | chr2:1...   289   5e-79
AT2G25760.1 | Symbols:  | Protein kinase family protein | chr2:1...   289   5e-79
AT5G18190.1 | Symbols:  | Protein kinase family protein | chr5:6...   287   2e-78
AT3G13670.1 | Symbols:  | Protein kinase family protein | chr3:4...   287   3e-78
AT3G03930.1 | Symbols:  | protein kinase-related | chr3:1011438-...   248   1e-66

>AT3G03940.1 | Symbols:  | Protein kinase family protein |
           chr3:1014412-1018244 REVERSE LENGTH=701
          Length = 701

 Score =  294 bits (753), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 135/161 (83%), Positives = 151/161 (93%)

Query: 1   MEHWEKNYYISAIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWREGFYVTAM 60
           ME WEKNYYIS+IAGA NGSSLVVM+KGTPYTQQSYKVSDSFPFKWINKKW+EGF+VT+M
Sbjct: 540 MEQWEKNYYISSIAGANNGSSLVVMAKGTPYTQQSYKVSDSFPFKWINKKWKEGFHVTSM 599

Query: 61  ATSSIRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVP 120
            T+  RWGVVMSR +G+S+QVVELDFLYPSEGIH+RW+ GYRITS AATADQAA +LS+P
Sbjct: 600 TTAGSRWGVVMSRNSGYSEQVVELDFLYPSEGIHRRWESGYRITSMAATADQAALILSIP 659

Query: 121 RRKPTDETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTV 161
           +RK TDETQETLRT+AFPSTHVKEKWAKNLYIAS+CYGRTV
Sbjct: 660 KRKITDETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTV 700



 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 7/123 (5%)

Query: 36  YKVSDSFPFKWINKKWREGFYVTAMATSSIRWGVVMSRGAGFSDQVVELD--FLYPSEGI 93
           Y V+D    + + K   +G +++ +A+S+  W ++M  G GFS QV EL   FL+  + I
Sbjct: 481 YNVADLRLAQHVEKGNEDGLFISCVASSANLWAIIMDAGTGFSSQVYELSSVFLH-KDWI 539

Query: 94  HKRWDCGYRITSTAATADQAAFVLSVPRRKPTDETQETLRTT-AFPSTHVKEKWAKNLYI 152
            ++W+  Y I+S A   + ++ V+     K T  TQ++ + + +FP   + +KW +  ++
Sbjct: 540 MEQWEKNYYISSIAGANNGSSLVVMA---KGTPYTQQSYKVSDSFPFKWINKKWKEGFHV 596

Query: 153 ASV 155
            S+
Sbjct: 597 TSM 599


>AT2G25760.2 | Symbols:  | Protein kinase family protein |
           chr2:10985118-10988652 REVERSE LENGTH=676
          Length = 676

 Score =  289 bits (740), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 135/162 (83%), Positives = 148/162 (91%)

Query: 1   MEHWEKNYYISAIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWREGFYVTAM 60
           ME WEKNYYI+A+AGA +G+S VVMSKGT Y QQSYKVSDSFPFKWINKKWREGFYVT+M
Sbjct: 515 MEQWEKNYYITAVAGANSGNSFVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSM 574

Query: 61  ATSSIRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVP 120
           AT+  +WG+VMSRGA FSDQV+ELDFLYPSEGIH+RW+ GYRITS AAT DQAAFVLSVP
Sbjct: 575 ATAGSKWGIVMSRGASFSDQVIELDFLYPSEGIHRRWENGYRITSVAATWDQAAFVLSVP 634

Query: 121 RRKPTDETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTVS 162
           RRK TDETQETLRT+AFPS HVKEKW KNLYIAS+CYGRTVS
Sbjct: 635 RRKLTDETQETLRTSAFPSNHVKEKWGKNLYIASICYGRTVS 676



 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 8/139 (5%)

Query: 22  LVVMSKGTPYTQQ-SYKVSDSFPFKWINKKWREGFYVTAMATSSIRWGVVMSRGAGFSDQ 80
           + + S   P  Q+  Y V+D+   + I K   +G +++++A+ +  W ++M  G+GF+DQ
Sbjct: 441 ISIYSAHRPMKQRYHYNVTDTRLAQHIEKGNEDGLFISSVASCTDLWALIMDAGSGFTDQ 500

Query: 81  VVEL--DFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVPRRKPTDETQETLRTT-AF 137
           V +L   FL+  E I ++W+  Y IT+ A      +FV+     K T   Q++ + + +F
Sbjct: 501 VYQLSPSFLH-KEWIMEQWEKNYYITAVAGANSGNSFVVM---SKGTQYLQQSYKVSDSF 556

Query: 138 PSTHVKEKWAKNLYIASVC 156
           P   + +KW +  Y+ S+ 
Sbjct: 557 PFKWINKKWREGFYVTSMA 575


>AT2G25760.1 | Symbols:  | Protein kinase family protein |
           chr2:10985118-10988652 REVERSE LENGTH=673
          Length = 673

 Score =  289 bits (740), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 135/162 (83%), Positives = 148/162 (91%)

Query: 1   MEHWEKNYYISAIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWREGFYVTAM 60
           ME WEKNYYI+A+AGA +G+S VVMSKGT Y QQSYKVSDSFPFKWINKKWREGFYVT+M
Sbjct: 512 MEQWEKNYYITAVAGANSGNSFVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTSM 571

Query: 61  ATSSIRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVP 120
           AT+  +WG+VMSRGA FSDQV+ELDFLYPSEGIH+RW+ GYRITS AAT DQAAFVLSVP
Sbjct: 572 ATAGSKWGIVMSRGASFSDQVIELDFLYPSEGIHRRWENGYRITSVAATWDQAAFVLSVP 631

Query: 121 RRKPTDETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTVS 162
           RRK TDETQETLRT+AFPS HVKEKW KNLYIAS+CYGRTVS
Sbjct: 632 RRKLTDETQETLRTSAFPSNHVKEKWGKNLYIASICYGRTVS 673



 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 75/139 (53%), Gaps = 8/139 (5%)

Query: 22  LVVMSKGTPYTQQ-SYKVSDSFPFKWINKKWREGFYVTAMATSSIRWGVVMSRGAGFSDQ 80
           + + S   P  Q+  Y V+D+   + I K   +G +++++A+ +  W ++M  G+GF+DQ
Sbjct: 438 ISIYSAHRPMKQRYHYNVTDTRLAQHIEKGNEDGLFISSVASCTDLWALIMDAGSGFTDQ 497

Query: 81  VVEL--DFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVPRRKPTDETQETLRTT-AF 137
           V +L   FL+  E I ++W+  Y IT+ A      +FV+     K T   Q++ + + +F
Sbjct: 498 VYQLSPSFLH-KEWIMEQWEKNYYITAVAGANSGNSFVVM---SKGTQYLQQSYKVSDSF 553

Query: 138 PSTHVKEKWAKNLYIASVC 156
           P   + +KW +  Y+ S+ 
Sbjct: 554 PFKWINKKWREGFYVTSMA 572


>AT5G18190.1 | Symbols:  | Protein kinase family protein |
           chr5:6010215-6013724 REVERSE LENGTH=691
          Length = 691

 Score =  287 bits (735), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 133/161 (82%), Positives = 149/161 (92%)

Query: 1   MEHWEKNYYISAIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWREGFYVTAM 60
           ME WEKNYYIS+IAG+ NG+SLVVMSKGT YTQQSYKVSDSFPFKWINKKW+E F+VT+M
Sbjct: 530 MEQWEKNYYISSIAGSDNGNSLVVMSKGTSYTQQSYKVSDSFPFKWINKKWKEDFHVTSM 589

Query: 61  ATSSIRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVP 120
            T+  RWGVVMSR +G+SDQVVELDFLYPS+GIH+RW+ GYRITS AATADQAAF+LSVP
Sbjct: 590 TTAGNRWGVVMSRNSGYSDQVVELDFLYPSDGIHRRWESGYRITSMAATADQAAFILSVP 649

Query: 121 RRKPTDETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTV 161
           +RK  DETQETLRTTAFPSTHVKEKWAKNLYIAS+C+GRTV
Sbjct: 650 KRKMMDETQETLRTTAFPSTHVKEKWAKNLYIASICFGRTV 690



 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 69/123 (56%), Gaps = 7/123 (5%)

Query: 36  YKVSDSFPFKWINKKWREGFYVTAMATSSIRWGVVMSRGAGFSDQVVELD--FLYPSEGI 93
           Y V+DS   + + K   +G  ++ +A+++  W ++M  G GF+ QV EL   FL+  + I
Sbjct: 471 YNVADSRLHQHVQKGNEDGLLISCVASAANLWALIMDAGTGFTSQVYELSTVFLH-KDWI 529

Query: 94  HKRWDCGYRITSTAATADQAAFVLSVPRRKPTDETQETLRTT-AFPSTHVKEKWAKNLYI 152
            ++W+  Y I+S A + +  + V+     K T  TQ++ + + +FP   + +KW ++ ++
Sbjct: 530 MEQWEKNYYISSIAGSDNGNSLVV---MSKGTSYTQQSYKVSDSFPFKWINKKWKEDFHV 586

Query: 153 ASV 155
            S+
Sbjct: 587 TSM 589


>AT3G13670.1 | Symbols:  | Protein kinase family protein |
           chr3:4469434-4473234 FORWARD LENGTH=703
          Length = 703

 Score =  287 bits (734), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 133/162 (82%), Positives = 148/162 (91%)

Query: 1   MEHWEKNYYISAIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWREGFYVTAM 60
           ME WEKNYYIS+IAGA NGSSLVVMSKGT YTQQSYKVSDSFPFKWINKKWREGF+VT+M
Sbjct: 542 MEQWEKNYYISSIAGASNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSM 601

Query: 61  ATSSIRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVP 120
           AT+  RWGVVMSR +G+S+QVVELDFLYPSEGIH+RWD G+RITSTAAT DQAA +LS+P
Sbjct: 602 ATAGNRWGVVMSRNSGYSEQVVELDFLYPSEGIHRRWDGGFRITSTAATTDQAALILSIP 661

Query: 121 RRKPTDETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTVS 162
           RR+  DETQETLRT+ FPSTHVKEKW KNLY+AS+ YGRTVS
Sbjct: 662 RRRLVDETQETLRTSQFPSTHVKEKWGKNLYLASLSYGRTVS 703



 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 67/124 (54%), Gaps = 7/124 (5%)

Query: 36  YKVSDSFPFKWINKKWREGFYVTAMATSSIRWGVVMSRGAGFSDQVVELD--FLYPSEGI 93
           Y V+D    + I +   +G  ++ +++ S  W ++M  G GF+ QV EL   FL+  E I
Sbjct: 483 YNVADIRLAQHIERGIADGLLISCVSSCSNLWALIMDAGTGFTHQVYELSPVFLH-KEWI 541

Query: 94  HKRWDCGYRITSTAATADQAAFVLSVPRRKPTDETQETLRTT-AFPSTHVKEKWAKNLYI 152
            ++W+  Y I+S A  ++ ++ V+     K T  TQ++ + + +FP   + +KW +  ++
Sbjct: 542 MEQWEKNYYISSIAGASNGSSLVV---MSKGTQYTQQSYKVSDSFPFKWINKKWREGFHV 598

Query: 153 ASVC 156
            S+ 
Sbjct: 599 TSMA 602


>AT3G03930.1 | Symbols:  | protein kinase-related |
           chr3:1011438-1012810 REVERSE LENGTH=287
          Length = 287

 Score =  248 bits (633), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 113/161 (70%), Positives = 137/161 (85%)

Query: 1   MEHWEKNYYISAIAGAVNGSSLVVMSKGTPYTQQSYKVSDSFPFKWINKKWREGFYVTAM 60
           M+ WEKNYYIS+IAGA NGSSLVVMSKGT Y QQSYK  DS P KW++KKW+EGF+VT+M
Sbjct: 127 MKQWEKNYYISSIAGANNGSSLVVMSKGTRYIQQSYKTGDSIPLKWMDKKWKEGFHVTSM 186

Query: 61  ATSSIRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITSTAATADQAAFVLSVP 120
            T   RWGVVMSR +GFS+QV+E+DFL PSE I++R + GY ITS AATADQAA +LS+P
Sbjct: 187 TTGGSRWGVVMSRNSGFSEQVMEVDFLNPSEDINRRLESGYMITSMAATADQAALILSIP 246

Query: 121 RRKPTDETQETLRTTAFPSTHVKEKWAKNLYIASVCYGRTV 161
           RRK TDE QETLRT++FPS++VK+KW KN++I S+CYGRTV
Sbjct: 247 RRKITDEIQETLRTSSFPSSYVKDKWGKNMFITSICYGRTV 287



 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 71/140 (50%), Gaps = 6/140 (4%)

Query: 22  LVVMSKGTPYTQQ-SYKVSDSFPFKWINKKWREGFYVTAMATSSIRWGVVMSRGAGFSDQ 80
           + V +K  P  Q+  + +++S       K  R+G +++ +A+ +  W +VM  G GF+ Q
Sbjct: 53  ISVYTKRPPMKQRFHHNIANSRLSHHAEKGKRDGLFISCVASEANLWALVMDAGTGFTSQ 112

Query: 81  VVELDFLY-PSEGIHKRWDCGYRITSTAATADQAAFVLSVPRRKPTDETQETLRT-TAFP 138
           V +    + P + I K+W+  Y I+S A   + ++ V+     K T   Q++ +T  + P
Sbjct: 113 VYKFSSTFLPKDWIMKQWEKNYYISSIAGANNGSSLVV---MSKGTRYIQQSYKTGDSIP 169

Query: 139 STHVKEKWAKNLYIASVCYG 158
              + +KW +  ++ S+  G
Sbjct: 170 LKWMDKKWKEGFHVTSMTTG 189