Miyakogusa Predicted Gene

Lj3g3v1204560.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1204560.1 tr|J0E0Q7|J0E0Q7_LOALO Leucine-rich protein
OS=Loa loa PE=4 SV=1,33.47,6e-19,L domain-like,NULL; LRR,Leucine-rich
repeat; LRR_4,Leucine rich repeat 4; LRR_8,NULL; SUBFAMILY NOT
,CUFF.42352.1
         (258 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22320.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...   296   8e-81
AT5G22320.2 | Symbols:  | Leucine-rich repeat (LRR) family prote...   270   8e-73
AT5G19680.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    69   4e-12
AT4G35470.1 | Symbols: PIRL4 | plant intracellular ras group-rel...    59   3e-09
AT3G15410.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    54   1e-07
AT3G15410.2 | Symbols:  | Leucine-rich repeat (LRR) family prote...    54   1e-07
AT2G34680.1 | Symbols: AIR9 | Outer arm dynein light chain 1 pro...    54   1e-07
AT2G17440.1 | Symbols: PIRL5 | plant intracellular ras group-rel...    52   3e-07
AT3G47090.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    51   7e-07

>AT5G22320.1 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr5:7388175-7390426 REVERSE LENGTH=452
          Length = 452

 Score =  296 bits (758), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 157/259 (60%), Positives = 198/259 (76%), Gaps = 1/259 (0%)

Query: 1   MTRLSSDQVLKEHNGGDPSSVTSLQLTFKALCDVSCLAIFSNLEKLDLKFNNLTSLEGLK 60
           M  L+ +QVLKE    DP SV  L L  KAL DVSCL+ F NLEKLDL+FNNLT L+GLK
Sbjct: 1   MNSLTVEQVLKEKKTNDPDSVKELNLGHKALTDVSCLSKFKNLEKLDLRFNNLTDLQGLK 60

Query: 61  SCVNLKWLSVVENKLESLEGIQGLTKLTVLNAGKNKLKSIDQVSSLVGLRALILNDNEIT 120
           SCVNLKWLSVVENKL+SL GI+ LTKLTVLNAGKNKLKS++++SSLV LRALILNDNEI+
Sbjct: 61  SCVNLKWLSVVENKLQSLNGIEALTKLTVLNAGKNKLKSMNEISSLVNLRALILNDNEIS 120

Query: 121 SICKFDQLKELNTLVLSKNPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCVELIEL 180
           SICK D LK+LN+LVLS+NPI +IG++L K+K+++K+SLS C ++ I +SLKSC +L EL
Sbjct: 121 SICKLDLLKDLNSLVLSRNPISEIGDSLSKLKNLSKISLSDCRIKAIGSSLKSCSDLKEL 180

Query: 181 RLAHNEIKTLPDELIHNSKLQNLDLGNNVITTWSEVXXXXXXXXXXXXXXQGNPVASSDK 240
           RLA+NEIK LP EL  N +L NLD+GNNVIT  S +              +GNP++ +DK
Sbjct: 181 RLANNEIKALPAELAVNKRLLNLDVGNNVITQLSGLEVLGTLSCLRNLNIRGNPISDNDK 240

Query: 241 ITRKIKK-ALPKLQIFNAR 258
             +K++   LP + +FNA+
Sbjct: 241 SAKKVRTLLLPSVNVFNAQ 259


>AT5G22320.2 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr5:7388175-7390426 REVERSE LENGTH=436
          Length = 436

 Score =  270 bits (690), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 149/259 (57%), Positives = 186/259 (71%), Gaps = 17/259 (6%)

Query: 1   MTRLSSDQVLKEHNGGDPSSVTSLQLTFKALCDVSCLAIFSNLEKLDLKFNNLTSLEGLK 60
           M  L+ +QVLKE    DP SV  L L  KAL DVSCL+ F NLEKLDL+FNNLT L+GLK
Sbjct: 1   MNSLTVEQVLKEKKTNDPDSVKELNLGHKALTDVSCLSKFKNLEKLDLRFNNLTDLQGLK 60

Query: 61  SCVNLKWLSVVENKLESLEGIQGLTKLTVLNAGKNKLKSIDQVSSLVGLRALILNDNEIT 120
           SCVNLKWLSVVENKL+SL GI+ LTKLTVLNAGKNKLKS++++SSLV LRALILNDNEI+
Sbjct: 61  SCVNLKWLSVVENKLQSLNGIEALTKLTVLNAGKNKLKSMNEISSLVNLRALILNDNEIS 120

Query: 121 SICKFDQLKELNTLVLSKNPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCVELIEL 180
           SICK D LK+LN+LVLS+NPI +IG++L K+K+++                KSC +L EL
Sbjct: 121 SICKLDLLKDLNSLVLSRNPISEIGDSLSKLKNLS----------------KSCSDLKEL 164

Query: 181 RLAHNEIKTLPDELIHNSKLQNLDLGNNVITTWSEVXXXXXXXXXXXXXXQGNPVASSDK 240
           RLA+NEIK LP EL  N +L NLD+GNNVIT  S +              +GNP++ +DK
Sbjct: 165 RLANNEIKALPAELAVNKRLLNLDVGNNVITQLSGLEVLGTLSCLRNLNIRGNPISDNDK 224

Query: 241 ITRKIKK-ALPKLQIFNAR 258
             +K++   LP + +FNA+
Sbjct: 225 SAKKVRTLLLPSVNVFNAQ 243


>AT5G19680.1 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr5:6649663-6651564 FORWARD LENGTH=328
          Length = 328

 Score = 68.6 bits (166), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 11/129 (8%)

Query: 31  LCDVSCLAIFSNLEKLDLKFNNLTSLEGLKSCVNLKWLSVVENKLESLEGIQGLTKLTVL 90
           LC + C+      +K+ L+ N LTS++G + CV L+ L +  N +  +EG+  L  L VL
Sbjct: 193 LCGLKCI------KKISLQSNRLTSMKGFEECVALEELYLSHNGISKMEGLSALVNLRVL 246

Query: 91  NAGKNKLKSIDQVSSLVGLRALILNDNEITSICKFDQL-----KELNTLVLSKNPIRKIG 145
           +   NKL S+D + +L  L  L LNDN+I S+    +      ++L T+ L  NP  K  
Sbjct: 247 DVSNNKLTSVDDIQNLTKLEDLWLNDNQIESLEAITEAVTGSKEKLTTIYLENNPCAKSS 306

Query: 146 EALMKVKSI 154
           + +  V+ I
Sbjct: 307 DYVAAVRQI 315



 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 26/195 (13%)

Query: 19  SSVTSLQLTFKALCDVSCLAIFSNLEKLDLKFNNLTSLEGLKSCV--------------- 63
           S +  L L    L  V  ++IF+ L   D+ FN +TSLEG+                   
Sbjct: 87  SDLEELVLRDNKLAKVPDVSIFTKLLVYDISFNEITSLEGISKASSTLKELYVSKNEVNK 146

Query: 64  --------NLKWLSVVENKLESLEGIQGLTKLTVLNAGKNKLKSIDQVSSLVGLRALILN 115
                   NL+ L +  N+L  +E ++  TKL  L  G+N++K ++ +  L  ++ + L 
Sbjct: 147 IMEIEHLHNLQILELGSNRLRVMENLENFTKLEELWLGRNRIKVVN-LCGLKCIKKISLQ 205

Query: 116 DNEITSICKFDQLKELNTLVLSKNPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCV 175
            N +TS+  F++   L  L LS N I K+ E L  + ++  L +S  +L  ++  +++  
Sbjct: 206 SNRLTSMKGFEECVALEELYLSHNGISKM-EGLSALVNLRVLDVSNNKLTSVD-DIQNLT 263

Query: 176 ELIELRLAHNEIKTL 190
           +L +L L  N+I++L
Sbjct: 264 KLEDLWLNDNQIESL 278


>AT4G35470.1 | Symbols: PIRL4 | plant intracellular ras
           group-related LRR 4 | chr4:16846531-16848448 FORWARD
           LENGTH=549
          Length = 549

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 91/173 (52%), Gaps = 4/173 (2%)

Query: 40  FSNLEKLDLKFNNLTSL-EGLKSCVNLKWLSVVENKLESLE-GIQGLTKLTVLNAGKNKL 97
            S+L KLDL  N +  L E +   +NL +L++  N+L SL      L +L  L+   N L
Sbjct: 268 LSSLTKLDLHSNRIGQLPESIGELLNLVYLNLGSNQLSSLPSAFSRLVRLEELDLSCNNL 327

Query: 98  KSIDQ-VSSLVGLRALILNDNEITSI-CKFDQLKELNTLVLSKNPIRKIGEALMKVKSIT 155
             + + + SLV L+ L +  N+I  I         L  L    N ++ + EA+ K+ ++ 
Sbjct: 328 PILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLIELRADYNKLKALPEAIGKITTLE 387

Query: 156 KLSLSYCELQGINTSLKSCVELIELRLAHNEIKTLPDELIHNSKLQNLDLGNN 208
            LS+ Y  ++ + T++ S   L EL ++ NE++++P+ L   + L  L++GNN
Sbjct: 388 ILSVRYNNIRQLPTTMSSLASLKELDVSFNELESVPESLCFATTLVKLNIGNN 440



 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 12/176 (6%)

Query: 35  SCLAIFSNLEKLDLKFNNLTSL-EGLKSCVNLKWLSVVENKLESLE-GIQGLTKLTVLNA 92
           S  +    LE+LDL  NNL  L E + S V+LK L V  N +E +   I G + L  L A
Sbjct: 309 SAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLIELRA 368

Query: 93  GKNKLKSIDQ-VSSLVGLRALILNDNEI----TSICKFDQLKELNTLVLSKNPIRKIGEA 147
             NKLK++ + +  +  L  L +  N I    T++     LKEL+   +S N +  + E+
Sbjct: 369 DYNKLKALPEAIGKITTLEILSVRYNNIRQLPTTMSSLASLKELD---VSFNELESVPES 425

Query: 148 LMKVKSITKLSL--SYCELQGINTSLKSCVELIELRLAHNEIKTLPDELIHNSKLQ 201
           L    ++ KL++  ++ ++  +  S+ +   L EL +++N+I+ LPD     +KL+
Sbjct: 426 LCFATTLVKLNIGNNFADMVSLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTKLR 481



 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 2/116 (1%)

Query: 81  IQGLTKLTVLNAGKNKLKSIDQ-VSSLVGLRALILNDNEITSI-CKFDQLKELNTLVLSK 138
           I GL+ LT L+   N++  + + +  L+ L  L L  N+++S+   F +L  L  L LS 
Sbjct: 265 IGGLSSLTKLDLHSNRIGQLPESIGELLNLVYLNLGSNQLSSLPSAFSRLVRLEELDLSC 324

Query: 139 NPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCVELIELRLAHNEIKTLPDEL 194
           N +  + E++  + S+ KL +   +++ I  S+  C  LIELR  +N++K LP+ +
Sbjct: 325 NNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLIELRADYNKLKALPEAI 380


>AT3G15410.1 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr3:5203380-5207279 FORWARD LENGTH=584
          Length = 584

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 22/155 (14%)

Query: 62  CVNLKWLSVVENKLESL-EGIQGLTKLTVLNAGKNKLKSIDQVSSLVGLRALILNDNEIT 120
            V+L+ L +  N +E L E ++ L  L VLN   NKL    Q+ + +G         E+T
Sbjct: 44  AVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLS---QLPAAIG---------ELT 91

Query: 121 SICKFDQLKELNTLVLSKNPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCVELIEL 180
           ++   D         +S N I ++ E +    S+ KL  S   L+ +  S+  C++L +L
Sbjct: 92  AMKSLD---------VSFNSISELPEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDL 142

Query: 181 RLAHNEIKTLPDELIHNSKLQNLDLGNNVITTWSE 215
           +  +N+I +LP+++++ SKL  LD+  N +T  SE
Sbjct: 143 KATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSE 177


>AT3G15410.2 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr3:5203380-5207279 FORWARD LENGTH=590
          Length = 590

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 80/155 (51%), Gaps = 22/155 (14%)

Query: 62  CVNLKWLSVVENKLESL-EGIQGLTKLTVLNAGKNKLKSIDQVSSLVGLRALILNDNEIT 120
            V+L+ L +  N +E L E ++ L  L VLN   NKL    Q+ + +G         E+T
Sbjct: 50  AVDLQKLILAHNDIEVLREDLKNLACLVVLNVSHNKLS---QLPAAIG---------ELT 97

Query: 121 SICKFDQLKELNTLVLSKNPIRKIGEALMKVKSITKLSLSYCELQGINTSLKSCVELIEL 180
           ++   D         +S N I ++ E +    S+ KL  S   L+ +  S+  C++L +L
Sbjct: 98  AMKSLD---------VSFNSISELPEQIGSAISLVKLDCSSNRLKELPDSIGRCLDLSDL 148

Query: 181 RLAHNEIKTLPDELIHNSKLQNLDLGNNVITTWSE 215
           +  +N+I +LP+++++ SKL  LD+  N +T  SE
Sbjct: 149 KATNNQISSLPEDMVNCSKLSKLDVEGNKLTALSE 183


>AT2G34680.1 | Symbols: AIR9 | Outer arm dynein light chain 1
           protein | chr2:14616947-14628300 REVERSE LENGTH=1708
          Length = 1708

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 3/116 (2%)

Query: 31  LCDVSCLAIFSNLEKLDLKFNNLTS--LEGLKSCVNLKWLSVVENKLESLEGIQGLTKLT 88
           L  +  + I + ++ LDL FN+      E L++C  L+ L +  N++ SL  +  L  L 
Sbjct: 304 LSTLEGIEILNRVKVLDLSFNDFKGPGFEPLENCKMLQQLYLAGNQITSLASLPQLPNLE 363

Query: 89  VLNAGKNKLKSIDQVSSLVGLRALILNDNEITSICKFDQLKELNTLVLSKNPIRKI 144
            L+  +NKLKS+  ++S   L+ L  + N+IT++  F  L  L  L + +NP+ KI
Sbjct: 364 FLSVAQNKLKSL-AMASQPRLQVLAASKNKITTLKDFPYLPVLEHLRVEENPLLKI 418



 Score = 48.1 bits (113), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 45  KLDLKFNNLTSLE--GLKSCVNLKWLSVVENKLESLEGIQGLTKLTVLNAGKNKLK--SI 100
           +LDL+ + + SL   GL    NL+++ + +N L +LEGI+ L ++ VL+   N  K    
Sbjct: 272 RLDLRGHRIRSLTSGGLHLSPNLEFVYLRDNLLSTLEGIEILNRVKVLDLSFNDFKGPGF 331

Query: 101 DQVSSLVGLRALILNDNEITSICKFDQLKELNTLVLSKNPIRKIGEA 147
           + + +   L+ L L  N+ITS+    QL  L  L +++N ++ +  A
Sbjct: 332 EPLENCKMLQQLYLAGNQITSLASLPQLPNLEFLSVAQNKLKSLAMA 378


>AT2G17440.1 | Symbols: PIRL5 | plant intracellular ras
           group-related LRR 5 | chr2:7571331-7573406 FORWARD
           LENGTH=526
          Length = 526

 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 25/173 (14%)

Query: 42  NLEKLDLKFNNLTSL-EGLKSCVNLKWLSVVENKLESL-EGIQGLTKLTVLNAGKNKLKS 99
           +LE+LDL  N+L+ L E + S V+LK L V  N +E +   I G + +  L A  N+LK+
Sbjct: 300 HLEELDLSSNSLSILPESIGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADYNRLKA 359

Query: 100 IDQVSSLVGLRALILNDNEITSICKFDQLKELNTLVLSKNPIRKIGEALMKVKSITKLSL 159
           + +    VG                  +L  L  L +  N IR++   +  + ++ +L +
Sbjct: 360 LPEA---VG------------------KLSTLEILTVRYNNIRQLPTTMSSMANLKELDV 398

Query: 160 SYCELQGINTSLKSCVELIELRLAHN--EIKTLPDELIHNSKLQNLDLGNNVI 210
           S+ EL+ +  SL     L++L + +N   +++LP  + +  KL+ LD+ NN I
Sbjct: 399 SFNELESVPESLCYAKTLVKLNIGNNFANLRSLPGLIGNLEKLEELDMSNNQI 451


>AT3G47090.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr3:17341512-17344645 REVERSE LENGTH=1009
          Length = 1009

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 91/174 (52%), Gaps = 14/174 (8%)

Query: 50  FNNLTSLEGLKSCVNLKWLSVVENKLESL---EGIQGLTKLTVLNAGKNKLK-SIDQ-VS 104
           F +L  L+ L +C +L  LSV  N+L        +   T+LTVLN   N +  SI   + 
Sbjct: 324 FGDLAFLDALTNCSHLHGLSVSYNRLGGALPTSIVNMSTELTVLNLKGNLIYGSIPHDIG 383

Query: 105 SLVGLRALILNDNEITS--ICKFDQLKELNTLVLSKNPIRKIGEALMKVKSIT---KLSL 159
           +L+GL++L+L DN +T         L  L  L+L  N  R  GE    + ++T   KL L
Sbjct: 384 NLIGLQSLLLADNLLTGPLPTSLGNLVGLGELILFSN--RFSGEIPSFIGNLTQLVKLYL 441

Query: 160 SYCELQGI-NTSLKSCVELIELRLAHNEIK-TLPDELIHNSKLQNLDLGNNVIT 211
           S    +GI   SL  C  +++L++ +N++  T+P E++    L +L++ +N ++
Sbjct: 442 SNNSFEGIVPPSLGDCSHMLDLQIGYNKLNGTIPKEIMQIPTLVHLNMESNSLS 495