Miyakogusa Predicted Gene

Lj3g3v1182320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1182320.1 tr|G7ITU0|G7ITU0_MEDTR Calpain-B OS=Medicago
truncatula GN=MTR_2g086560 PE=4 SV=1,72.06,0,seg,NULL; EF-hand,
calcium binding motif,Calcium-binding EF-hand; no
description,EF-hand-like domain,CUFF.42332.1
         (253 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27480.1 | Symbols:  | Calcium-binding EF-hand family protein...   225   3e-59
AT5G04170.1 | Symbols:  | Calcium-binding EF-hand family protein...   191   4e-49
AT3G10300.3 | Symbols:  | Calcium-binding EF-hand family protein...   188   3e-48
AT3G10300.4 | Symbols:  | Calcium-binding EF-hand family protein...   138   3e-33
AT3G10300.2 | Symbols:  | Calcium-binding EF-hand family protein...   138   4e-33
AT3G10300.5 | Symbols:  | Calcium-binding EF-hand family protein...   134   8e-32
AT3G10300.1 | Symbols:  | Calcium-binding EF-hand family protein...    64   9e-11

>AT2G27480.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr2:11746811-11747885 FORWARD LENGTH=228
          Length = 228

 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 102/176 (57%), Positives = 138/176 (78%), Gaps = 2/176 (1%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLT-SGFQKFNIGTIRLLMFLFKHP-NEPLRVG 137
           THPE++R+F+  DR++SGF++E EL+Q L+ SG+   +  TIRLL+F++K P +  LR+G
Sbjct: 53  THPEIVRSFESADRNRSGFLEESELRQALSLSGYDGISNRTIRLLLFIYKIPVDSLLRLG 112

Query: 138 PKEFAALWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYSDG 197
           PKE+  LWNCL  WR IF RYD+DRSGK++  +LRDA Y +G  +P SV QL++S++ DG
Sbjct: 113 PKEYVELWNCLAQWRAIFNRYDRDRSGKMNSTQLRDAFYNLGCVLPTSVHQLIVSQFDDG 172

Query: 198 TGRRVELGFDSFVECGMIIKGLTDKFKEKDTRYTGSATLSYDAFMSMVIPFLVSYD 253
           TG+ V+L FDSF+ECGMI+KGLT+KF+E D  YTG ATLSYD FM MVIPF+ +YD
Sbjct: 173 TGKTVDLCFDSFLECGMIVKGLTEKFRENDPGYTGYATLSYDVFMLMVIPFIATYD 228


>AT5G04170.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr5:1145579-1147519 FORWARD LENGTH=354
          Length = 354

 Score =  191 bits (485), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 127/172 (73%), Gaps = 1/172 (0%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLTSGFQKFNIGTIRLLMFLFKHPNEPLRVGPK 139
           T P ++  FQ  D+D SGFID+KELQ  L+S  Q+F++ T+ LLM+LF + N  +++GPK
Sbjct: 184 TDPNIVACFQAADQDGSGFIDDKELQGALSSYQQRFSMRTVHLLMYLFTNSNA-MKIGPK 242

Query: 140 EFAALWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYSDGTG 199
           EF AL+  L +WR IFER DKDRSG+ID  ELRDAL  +G++V   VL LL+SK+    G
Sbjct: 243 EFTALFYSLQNWRSIFERSDKDRSGRIDVNELRDALLSLGFSVSPVVLDLLVSKFDKSGG 302

Query: 200 RRVELGFDSFVECGMIIKGLTDKFKEKDTRYTGSATLSYDAFMSMVIPFLVS 251
           +   + +D+F+EC + +KGLT+KFKEKDT Y+GSAT +Y++FM  V+PFL++
Sbjct: 303 KNRAIEYDNFIECCLTVKGLTEKFKEKDTAYSGSATFNYESFMLTVLPFLIA 354


>AT3G10300.3 | Symbols:  | Calcium-binding EF-hand family protein |
           chr3:3186436-3188071 FORWARD LENGTH=335
          Length = 335

 Score =  188 bits (477), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 90/172 (52%), Positives = 123/172 (71%), Gaps = 1/172 (0%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLTSGFQKFNIGTIRLLMFLFKHPNEPLRVGPK 139
           T P ++  FQ  DRD SGFID+KELQ  L+S  Q F+I T+ LLM+LF + N   ++GPK
Sbjct: 165 TDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNV-RKIGPK 223

Query: 140 EFAALWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYSDGTG 199
           EF +L+  L +WR IFER+DKDRSG+ID  ELRDAL  +G++V   +L LL+SK+    G
Sbjct: 224 EFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSGG 283

Query: 200 RRVELGFDSFVECGMIIKGLTDKFKEKDTRYTGSATLSYDAFMSMVIPFLVS 251
           R   + +D+F+EC + +KGLT+KFKEKDT  +GSA  +Y+ FM  V+PFLV+
Sbjct: 284 RNRAIEYDNFIECCLTVKGLTEKFKEKDTALSGSAIFNYENFMLTVLPFLVA 335


>AT3G10300.4 | Symbols:  | Calcium-binding EF-hand family protein |
           chr3:3186436-3188075 FORWARD LENGTH=334
          Length = 334

 Score =  138 bits (348), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 67/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLTSGFQKFNIGTIRLLMFLFKHPNEPLRVGPK 139
           T P ++  FQ  DRD SGFID+KELQ  L+S  Q F+I T+ LLM+LF + N   ++GPK
Sbjct: 165 TDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNV-RKIGPK 223

Query: 140 EFAALWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYSDGTG 199
           EF +L+  L +WR IFER+DKDRSG+ID  ELRDAL  +G++V   +L LL+SK+    G
Sbjct: 224 EFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSGG 283

Query: 200 RRVELGFDSFVE 211
           R   + +D+F+E
Sbjct: 284 RNRAIEYDNFIE 295


>AT3G10300.2 | Symbols:  | Calcium-binding EF-hand family protein |
           chr3:3186436-3187825 FORWARD LENGTH=324
          Length = 324

 Score =  138 bits (347), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 67/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLTSGFQKFNIGTIRLLMFLFKHPNEPLRVGPK 139
           T P ++  FQ  DRD SGFID+KELQ  L+S  Q F+I T+ LLM+LF + N   ++GPK
Sbjct: 165 TDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNV-RKIGPK 223

Query: 140 EFAALWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYSDGTG 199
           EF +L+  L +WR IFER+DKDRSG+ID  ELRDAL  +G++V   +L LL+SK+    G
Sbjct: 224 EFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSGG 283

Query: 200 RRVELGFDSFVE 211
           R   + +D+F+E
Sbjct: 284 RNRAIEYDNFIE 295


>AT3G10300.5 | Symbols:  | Calcium-binding EF-hand family protein |
           chr3:3186436-3187825 FORWARD LENGTH=325
          Length = 325

 Score =  134 bits (336), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 67/133 (50%), Positives = 92/133 (69%), Gaps = 2/133 (1%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLTSGFQKFNIGTIRLLMFLFKHPNEPLRVG-P 138
           T P ++  FQ  DRD SGFID+KELQ  L+S  Q F+I T+ LLM+LF + N   ++G P
Sbjct: 165 TDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSNV-RKIGRP 223

Query: 139 KEFAALWNCLGHWRGIFERYDKDRSGKIDPLELRDALYGIGYAVPGSVLQLLLSKYSDGT 198
           KEF +L+  L +WR IFER+DKDRSG+ID  ELRDAL  +G++V   +L LL+SK+    
Sbjct: 224 KEFTSLFFSLQNWRSIFERFDKDRSGRIDTNELRDALMSLGFSVSPVILDLLVSKFDKSG 283

Query: 199 GRRVELGFDSFVE 211
           GR   + +D+F+E
Sbjct: 284 GRNRAIEYDNFIE 296


>AT3G10300.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr3:3186436-3187134 FORWARD LENGTH=232
          Length = 232

 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 36/52 (69%)

Query: 80  THPEVIRAFQMVDRDQSGFIDEKELQQVLTSGFQKFNIGTIRLLMFLFKHPN 131
           T P ++  FQ  DRD SGFID+KELQ  L+S  Q F+I T+ LLM+LF + N
Sbjct: 165 TDPNIVACFQAADRDNSGFIDDKELQGALSSYNQSFSIRTVHLLMYLFTNSN 216