Miyakogusa Predicted Gene

Lj3g3v1149120.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1149120.2 tr|G7ITP8|G7ITP8_MEDTR Histone transcription
regulator HIRA OS=Medicago truncatula GN=MTR_2g086140
P,77.54,0,SUBFAMILY NOT NAMED,NULL; MEMBER OF THE HIR1 FAMILY OF
WD-REPEAT PROTEINS,NULL; Hira,TUP1-like enhan,CUFF.42315.2
         (612 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA ...   647   0.0  
AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA ...   641   0.0  

>AT3G44530.2 | Symbols: HIRA | homolog of histone chaperone HIRA |
           chr3:16116026-16121247 FORWARD LENGTH=1040
          Length = 1040

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/544 (63%), Positives = 399/544 (73%), Gaps = 36/544 (6%)

Query: 2   TKAFVHAGVTTKNVEPQVDDGIKSGGPAGDGSDKVTTSGRISSPVKQREYRRPDGRKRII 61
           TK  V    T K  + QVDD  K+    G   +K +T  R+SSPV Q+ YRRPDGRKRII
Sbjct: 429 TKPSVSVESTAKRRKSQVDDRNKAAESTGQTLNKASTLNRVSSPVNQKVYRRPDGRKRII 488

Query: 62  PEAVGV-QQEN---ISGQQALDFPFVSSDHRKAPDRAVSNNDDIRAST--LGGANF--RS 113
           PEAVGV QQEN   I+G+     P  ++    AP +  S +  +  S   L G     R+
Sbjct: 489 PEAVGVPQQENNIMINGESHNFLPASAA----APAKGDSGDFPVEISNRDLSGKEIVCRN 544

Query: 114 SDLKERSGVTARATISESLVIQKVPASAG-DGSINVEQLGNMMTXXXXXXXGATLTIRVF 172
            DLKERS +TARATI+ESLVI+KVP ++G DG +NVEQ     +          L IRVF
Sbjct: 545 PDLKERSRITARATITESLVIEKVPGTSGRDGVLNVEQ-----SVGIKESSSTDLLIRVF 599

Query: 173 DKKGDDGTSPILLEARPREHVVTDIAGVGNTSMTKETEILCTRGPHTLWSDRISGKVTVL 232
           D K  +   P+ LEA PREH + D  G  +TSM KETEI C +   TLWSDRI G+VTVL
Sbjct: 600 DWKDGEAAPPVCLEACPREHAL-DTVGAVSTSMVKETEISCKKSGETLWSDRIMGRVTVL 658

Query: 233 AGNVNFWAVGCEDGSLQIYSKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGSLYLWD 292
           AGN NFWA GCEDGSLQ+Y+KCGRRAMPTMMMGSAATF+DCD+ WKLLLVTRKGSLY+WD
Sbjct: 659 AGNPNFWAAGCEDGSLQVYTKCGRRAMPTMMMGSAATFIDCDDSWKLLLVTRKGSLYVWD 718

Query: 293 LFNRTCLLQD----------SLASLVTSSPNSSAKDAG------TIKVISAKLSKSGSPL 336
           LFNR C+L D          +L+S V     S  +D+       TIKVIS KLSKSGSPL
Sbjct: 719 LFNRKCVLHDSLSSLVSSDVNLSSTVKVELLSWYEDSSVIDLDCTIKVISVKLSKSGSPL 778

Query: 337 VVLATRHAFLFDMSFKCWLRVADDCFPASNFASSWSLGSIHGGELADLQVDLRKYMARKP 396
           VVLATRHAFLFD S  CWLRVADDCFPASNF+SSW+LGS   GELA LQVD+RKYMARKP
Sbjct: 779 VVLATRHAFLFDTSLMCWLRVADDCFPASNFSSSWNLGSAPCGELAGLQVDVRKYMARKP 838

Query: 397 GWTRVTDDGVQTRAHLESQLASSLALGSPNDYRQCLLSYVRFLAREADESRLREVCESFL 456
           GW R+TDDG QTRAHLESQLASSLAL SPN+YRQCLL+YVRFLAREADESRLREVCESFL
Sbjct: 839 GWNRITDDGTQTRAHLESQLASSLALESPNEYRQCLLAYVRFLAREADESRLREVCESFL 898

Query: 457 GPPTGMAEEASPDSNKLAWDPFVLGMRKHQLLREDILPSMASNRKVQRLLNEFTDLLSEY 516
           GPPTGMAE AS D+N L+WDP+VLG++KH+LLR DILP+MASNRKVQRLLNEF DLLSEY
Sbjct: 899 GPPTGMAEAASSDTN-LSWDPYVLGVKKHKLLRNDILPAMASNRKVQRLLNEFIDLLSEY 957

Query: 517 DIVD 520
           + V+
Sbjct: 958 EDVE 961


>AT3G44530.1 | Symbols: HIRA | homolog of histone chaperone HIRA |
           chr3:16116026-16121247 FORWARD LENGTH=1058
          Length = 1058

 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/562 (61%), Positives = 398/562 (70%), Gaps = 54/562 (9%)

Query: 2   TKAFVHAGVTTKNVEPQVDDGIKSGGPAGDGSDKVTTSGRISSPVKQREYRRPDGRKRII 61
           TK  V    T K  + QVDD  K+    G   +K +T  R+SSPV Q+ YRRPDGRKRII
Sbjct: 429 TKPSVSVESTAKRRKSQVDDRNKAAESTGQTLNKASTLNRVSSPVNQKVYRRPDGRKRII 488

Query: 62  PEAVGV-QQEN---ISGQQALDFPFVSSDHRKAPDRAVSNNDDIRAST--LGGANF--RS 113
           PEAVGV QQEN   I+G+     P  ++    AP +  S +  +  S   L G     R+
Sbjct: 489 PEAVGVPQQENNIMINGESHNFLPASAA----APAKGDSGDFPVEISNRDLSGKEIVCRN 544

Query: 114 SDLKERSGVTARATISESLVIQKVPASAG-DGSINVEQLGNMMTXXXXXXXGATLTIRVF 172
            DLKERS +TARATI+ESLVI+KVP ++G DG +NVEQ     +          L IRVF
Sbjct: 545 PDLKERSRITARATITESLVIEKVPGTSGRDGVLNVEQ-----SVGIKESSSTDLLIRVF 599

Query: 173 DKKGDDGTSPILLEARPREHVVTDIAGVGNTSMTKETEILCTRGPHTLWSDRISGKVTVL 232
           D K  +   P+ LEA PREH + D  G  +TSM KETEI C +   TLWSDRI G+VTVL
Sbjct: 600 DWKDGEAAPPVCLEACPREHAL-DTVGAVSTSMVKETEISCKKSGETLWSDRIMGRVTVL 658

Query: 233 AGNVNFWAVGCEDGSLQIYSKCGRRAMPTMMMGSAATFVDCDECWKLLLVTRKGSLYLWD 292
           AGN NFWA GCEDGSLQ+Y+KCGRRAMPTMMMGSAATF+DCD+ WKLLLVTRKGSLY+WD
Sbjct: 659 AGNPNFWAAGCEDGSLQVYTKCGRRAMPTMMMGSAATFIDCDDSWKLLLVTRKGSLYVWD 718

Query: 293 LFNRTCLLQ---------------------------------DSLASLVTSSPNSSAKDA 319
           LFNR C+L                                  D +  L++   +SS  D 
Sbjct: 719 LFNRKCVLHDSLSSLVSSDVNLSSTVKVKRMKNWYLLIFLVGDLVVELLSWYEDSSVIDL 778

Query: 320 G-TIKVISAKLSKSGSPLVVLATRHAFLFDMSFKCWLRVADDCFPASNFASSWSLGSIHG 378
             TIKVIS KLSKSGSPLVVLATRHAFLFD S  CWLRVADDCFPASNF+SSW+LGS   
Sbjct: 779 DCTIKVISVKLSKSGSPLVVLATRHAFLFDTSLMCWLRVADDCFPASNFSSSWNLGSAPC 838

Query: 379 GELADLQVDLRKYMARKPGWTRVTDDGVQTRAHLESQLASSLALGSPNDYRQCLLSYVRF 438
           GELA LQVD+RKYMARKPGW R+TDDG QTRAHLESQLASSLAL SPN+YRQCLL+YVRF
Sbjct: 839 GELAGLQVDVRKYMARKPGWNRITDDGTQTRAHLESQLASSLALESPNEYRQCLLAYVRF 898

Query: 439 LAREADESRLREVCESFLGPPTGMAEEASPDSNKLAWDPFVLGMRKHQLLREDILPSMAS 498
           LAREADESRLREVCESFLGPPTGMAE AS D+N L+WDP+VLG++KH+LLR DILP+MAS
Sbjct: 899 LAREADESRLREVCESFLGPPTGMAEAASSDTN-LSWDPYVLGVKKHKLLRNDILPAMAS 957

Query: 499 NRKVQRLLNEFTDLLSEYDIVD 520
           NRKVQRLLNEF DLLSEY+ V+
Sbjct: 958 NRKVQRLLNEFIDLLSEYEDVE 979