Miyakogusa Predicted Gene

Lj3g3v1133720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1133720.1 Non Chatacterized Hit- tr|I1IUD8|I1IUD8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,49.51,2e-19,Dabb,Stress responsive alpha-beta barrel; Dimeric
alpha+beta barrel,Dimeric alpha-beta barrel; Stres,CUFF.42278.1
         (107 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22580.1 | Symbols:  | Stress responsive A/B Barrel Domain | ...   135   6e-33
AT3G17210.1 | Symbols: ATHS1, HS1 | heat stable protein 1 | chr3...    82   5e-17

>AT5G22580.1 | Symbols:  | Stress responsive A/B Barrel Domain |
           chr5:7502709-7503137 FORWARD LENGTH=111
          Length = 111

 Score =  135 bits (340), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 78/104 (75%)

Query: 4   FKHFVIVKFKEDVVVEELTKAMEKLVSEIDAVKSFEWGQDIESLDILRQGFTHAFLMTFS 63
           FKH V+VKFKED  V+E+ K +E LVS+ID VKSFEWG+D ES D+LRQGFTHAF MTF 
Sbjct: 6   FKHLVVVKFKEDTKVDEILKGLENLVSQIDTVKSFEWGEDKESHDMLRQGFTHAFSMTFE 65

Query: 64  KKEDFAAFQGHPNHVEFSATFSSAIEKIVVLDFPSTLVKPPAAA 107
            K+ + AF  HP HVEFSA F++ I+KIV+LDFP   VK    A
Sbjct: 66  NKDGYVAFTSHPLHVEFSAAFTAVIDKIVLLDFPVAAVKSSVVA 109


>AT3G17210.1 | Symbols: ATHS1, HS1 | heat stable protein 1 |
           chr3:5882318-5882896 FORWARD LENGTH=109
          Length = 109

 Score = 82.4 bits (202), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 4/103 (3%)

Query: 2   GEFKHFVIVKFKEDVV---VEELTKAMEKLVSEIDAVKSFEWGQDIESLDILRQGFTHAF 58
           G  KH ++  FK+ V    +EEL K    LV+ I+ +K+F WG+D+ S++ L QG+TH F
Sbjct: 6   GPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDV-SIENLHQGYTHIF 64

Query: 59  LMTFSKKEDFAAFQGHPNHVEFSATFSSAIEKIVVLDFPSTLV 101
             TF  KE  A +  HP HVEF+  F  +++K++V+D+  T V
Sbjct: 65  ESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSV 107