Miyakogusa Predicted Gene

Lj3g3v1131280.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1131280.2 Non Chatacterized Hit- tr|I1LTQ5|I1LTQ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1492
PE=,96.28,0,Adaptin_N,Clathrin/coatomer adaptor, adaptin-like,
N-terminal; no description,Armadillo-like helical,CUFF.42271.2
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22780.1 | Symbols:  | Adaptor protein complex AP-2, alpha su...   416   e-117
AT5G22770.2 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-...   416   e-117
AT5G22770.3 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-...   416   e-117
AT5G22770.1 | Symbols: alpha-ADR | alpha-adaptin | chr5:7579844-...   416   e-117
AT1G60070.2 | Symbols:  | Adaptor protein complex AP-1, gamma su...   132   2e-31
AT1G60070.1 | Symbols:  | Adaptor protein complex AP-1, gamma su...   132   2e-31
AT1G23900.2 | Symbols: GAMMA-ADAPTIN 1 | gamma-adaptin 1 | chr1:...   128   4e-30
AT1G23900.1 | Symbols: GAMMA-ADAPTIN 1, Gamma-ADR | gamma-adapti...   128   4e-30
AT1G31730.1 | Symbols:  | Adaptin family protein | chr1:11359907...    91   7e-19

>AT5G22780.1 | Symbols:  | Adaptor protein complex AP-2, alpha
           subunit | chr5:7590100-7597828 REVERSE LENGTH=1013
          Length = 1013

 Score =  416 bits (1069), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/217 (91%), Positives = 210/217 (96%)

Query: 1   MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSL 60
           MHLDAEKEMMSQCVALLGKFI+VREPNIRYLGLENMTRMLMVTDVQDIIK+HQ+QII+SL
Sbjct: 308 MHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSL 367

Query: 61  TDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD 120
            DPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEF+MREELSLKAAILAEKFAPD
Sbjct: 368 KDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEKFAPD 427

Query: 121 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVK 180
           LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDL+PYAA KAREY+D  AIHETMVK
Sbjct: 428 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYMDKIAIHETMVK 487

Query: 181 VSAYILGEFGHLLVRRPGCSPKEIFNIIHEKLPTVST 217
           VSAYILGE+GHLL R+PGCS  E+F+I+HEKLPTVST
Sbjct: 488 VSAYILGEYGHLLARQPGCSASELFSILHEKLPTVST 524


>AT5G22770.2 | Symbols: alpha-ADR | alpha-adaptin |
           chr5:7579844-7588026 REVERSE LENGTH=1012
          Length = 1012

 Score =  416 bits (1069), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/217 (91%), Positives = 210/217 (96%)

Query: 1   MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSL 60
           MHLDAEKEMMSQCVALLGKFI+VREPNIRYLGLENMTRMLMVTDVQDIIK+HQ+QII+SL
Sbjct: 308 MHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSL 367

Query: 61  TDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD 120
            DPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEF+MREELSLKAAILAEKFAPD
Sbjct: 368 KDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEKFAPD 427

Query: 121 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVK 180
           LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDL+PYAA KAREYLD  AIHETMVK
Sbjct: 428 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYLDKIAIHETMVK 487

Query: 181 VSAYILGEFGHLLVRRPGCSPKEIFNIIHEKLPTVST 217
           VSAYILGE+GHLL R+PGCS  E+F+I+HEKLPT+ST
Sbjct: 488 VSAYILGEYGHLLARQPGCSASELFSILHEKLPTIST 524


>AT5G22770.3 | Symbols: alpha-ADR | alpha-adaptin |
           chr5:7579844-7588026 REVERSE LENGTH=1012
          Length = 1012

 Score =  416 bits (1069), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/217 (91%), Positives = 210/217 (96%)

Query: 1   MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSL 60
           MHLDAEKEMMSQCVALLGKFI+VREPNIRYLGLENMTRMLMVTDVQDIIK+HQ+QII+SL
Sbjct: 308 MHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSL 367

Query: 61  TDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD 120
            DPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEF+MREELSLKAAILAEKFAPD
Sbjct: 368 KDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEKFAPD 427

Query: 121 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVK 180
           LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDL+PYAA KAREYLD  AIHETMVK
Sbjct: 428 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYLDKIAIHETMVK 487

Query: 181 VSAYILGEFGHLLVRRPGCSPKEIFNIIHEKLPTVST 217
           VSAYILGE+GHLL R+PGCS  E+F+I+HEKLPT+ST
Sbjct: 488 VSAYILGEYGHLLARQPGCSASELFSILHEKLPTIST 524


>AT5G22770.1 | Symbols: alpha-ADR | alpha-adaptin |
           chr5:7579844-7588026 REVERSE LENGTH=1012
          Length = 1012

 Score =  416 bits (1069), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 198/217 (91%), Positives = 210/217 (96%)

Query: 1   MHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSL 60
           MHLDAEKEMMSQCVALLGKFI+VREPNIRYLGLENMTRMLMVTDVQDIIK+HQ+QII+SL
Sbjct: 308 MHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSL 367

Query: 61  TDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPD 120
            DPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEF+MREELSLKAAILAEKFAPD
Sbjct: 368 KDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAILAEKFAPD 427

Query: 121 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVK 180
           LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDL+PYAA KAREYLD  AIHETMVK
Sbjct: 428 LSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYLDKIAIHETMVK 487

Query: 181 VSAYILGEFGHLLVRRPGCSPKEIFNIIHEKLPTVST 217
           VSAYILGE+GHLL R+PGCS  E+F+I+HEKLPT+ST
Sbjct: 488 VSAYILGEYGHLLARQPGCSASELFSILHEKLPTIST 524


>AT1G60070.2 | Symbols:  | Adaptor protein complex AP-1, gamma
           subunit | chr1:22142944-22149296 REVERSE LENGTH=898
          Length = 898

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 114/185 (61%), Gaps = 2/185 (1%)

Query: 14  VALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALD 73
           + +LGKF++ R+ NIRY+ L  + R L V D Q  ++RH+A I+  + D D SI++RAL+
Sbjct: 314 INILGKFLSNRDNNIRYVALNMLMRSLTV-DSQ-AVQRHRATILECVKDSDASIQKRALE 371

Query: 74  LLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLID 133
           L+Y + + +N K + +EL++YL  +E   + +L+ K   + EKFAP+  WY+D +L+++ 
Sbjct: 372 LIYLLVNENNVKPLAKELIEYLEVSEQDFKGDLTAKICSIVEKFAPEKIWYIDQMLKVLS 431

Query: 134 KAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVKVSAYILGEFGHLL 193
           +AG +V +D+W  ++  +TN  DL  Y        L      ET+V+V+ + +GE+  LL
Sbjct: 432 EAGTYVKEDVWHALIVVITNAPDLHGYTVRALYRALHTSFEQETLVRVAIWCIGEYADLL 491

Query: 194 VRRPG 198
           V   G
Sbjct: 492 VNNAG 496


>AT1G60070.1 | Symbols:  | Adaptor protein complex AP-1, gamma
           subunit | chr1:22142944-22149296 REVERSE LENGTH=862
          Length = 862

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 114/185 (61%), Gaps = 2/185 (1%)

Query: 14  VALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALD 73
           + +LGKF++ R+ NIRY+ L  + R L V D Q  ++RH+A I+  + D D SI++RAL+
Sbjct: 314 INILGKFLSNRDNNIRYVALNMLMRSLTV-DSQ-AVQRHRATILECVKDSDASIQKRALE 371

Query: 74  LLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLID 133
           L+Y + + +N K + +EL++YL  +E   + +L+ K   + EKFAP+  WY+D +L+++ 
Sbjct: 372 LIYLLVNENNVKPLAKELIEYLEVSEQDFKGDLTAKICSIVEKFAPEKIWYIDQMLKVLS 431

Query: 134 KAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVKVSAYILGEFGHLL 193
           +AG +V +D+W  ++  +TN  DL  Y        L      ET+V+V+ + +GE+  LL
Sbjct: 432 EAGTYVKEDVWHALIVVITNAPDLHGYTVRALYRALHTSFEQETLVRVAIWCIGEYADLL 491

Query: 194 VRRPG 198
           V   G
Sbjct: 492 VNNAG 496


>AT1G23900.2 | Symbols: GAMMA-ADAPTIN 1 | gamma-adaptin 1 |
           chr1:8441379-8447152 FORWARD LENGTH=876
          Length = 876

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 113/185 (61%), Gaps = 2/185 (1%)

Query: 14  VALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALD 73
           + +LG+F++ R+ NIRY+ L  + + +   D    ++RH+  I+  + DPD SIR+RAL+
Sbjct: 314 INILGRFLSNRDNNIRYVALNMLMKAITFDD--QAVQRHRVTILECVKDPDASIRKRALE 371

Query: 74  LLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLID 133
           L+  + + +N   + +EL+ YL  ++   +E+LS K   + EKF+P+  WY+D +L+++ 
Sbjct: 372 LVTLLVNENNVTQLTKELIDYLEISDEDFKEDLSAKICFIVEKFSPEKLWYIDQMLKVLC 431

Query: 134 KAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVKVSAYILGEFGHLL 193
           +AG FV DD+W  ++  ++N  +L  Y      + +   +  ET+V+V+ + +GE+G LL
Sbjct: 432 EAGKFVKDDVWHALIVVISNASELHGYTVRALYKSVLTYSEQETLVRVAVWCIGEYGDLL 491

Query: 194 VRRPG 198
           V   G
Sbjct: 492 VNNVG 496


>AT1G23900.1 | Symbols: GAMMA-ADAPTIN 1, Gamma-ADR | gamma-adaptin 1
           | chr1:8441379-8447152 FORWARD LENGTH=876
          Length = 876

 Score =  128 bits (321), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 113/185 (61%), Gaps = 2/185 (1%)

Query: 14  VALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALD 73
           + +LG+F++ R+ NIRY+ L  + + +   D    ++RH+  I+  + DPD SIR+RAL+
Sbjct: 314 INILGRFLSNRDNNIRYVALNMLMKAITFDD--QAVQRHRVTILECVKDPDASIRKRALE 371

Query: 74  LLYGMCDVSNAKDIVEELLQYLSTAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLID 133
           L+  + + +N   + +EL+ YL  ++   +E+LS K   + EKF+P+  WY+D +L+++ 
Sbjct: 372 LVTLLVNENNVTQLTKELIDYLEISDEDFKEDLSAKICFIVEKFSPEKLWYIDQMLKVLC 431

Query: 134 KAGDFVSDDIWFRVVQFVTNNEDLRPYAAVKAREYLDNPAIHETMVKVSAYILGEFGHLL 193
           +AG FV DD+W  ++  ++N  +L  Y      + +   +  ET+V+V+ + +GE+G LL
Sbjct: 432 EAGKFVKDDVWHALIVVISNASELHGYTVRALYKSVLTYSEQETLVRVAVWCIGEYGDLL 491

Query: 194 VRRPG 198
           V   G
Sbjct: 492 VNNVG 496


>AT1G31730.1 | Symbols:  | Adaptin family protein |
           chr1:11359907-11363916 FORWARD LENGTH=938
          Length = 938

 Score = 90.5 bits (223), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 102/184 (55%), Gaps = 12/184 (6%)

Query: 17  LGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKRHQAQIISSLTDPDISIRRRALDLLY 76
           + KF+     N++Y+G++ + R++ ++   DI ++HQ  +I  L DPD +++R+  +LLY
Sbjct: 330 ISKFLKSDSHNLKYMGIDGLGRLIKIS--PDIAEQHQLAVIDCLEDPDDTLKRKTFELLY 387

Query: 77  GMCDVSNAKDIVEELLQYL-STAEFAMREELSLKAAILAEKFAPDLSWYVDVILQLIDKA 135
            M   SN + IV+ ++ Y+ S  +   + E++ +   LAE+FAP   W++ ++ ++ + A
Sbjct: 388 KMTKSSNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQFAPSNQWFIQIMNKVFEHA 447

Query: 136 GDFVSDDIWFRVVQFVTN--NED-------LRPYAAVKAREYLDNPAIHETMVKVSAYIL 186
           GD V+  +   +++ +     ED       LR  A     + +  P +    ++V +++L
Sbjct: 448 GDLVNIKVAHNLMRLIAEGFGEDDDDADSKLRLSAVESYLQLISEPKLPSLFLQVISWVL 507

Query: 187 GEFG 190
           GE+G
Sbjct: 508 GEYG 511