Miyakogusa Predicted Gene
- Lj3g3v1131270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1131270.1 CUFF.42270.1
(90 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22790.1 | Symbols: RER1 | reticulata-related 1 | chr5:759939... 152 4e-38
AT2G37860.3 | Symbols: LCD1 | Protein of unknown function (DUF34... 150 2e-37
AT5G12470.1 | Symbols: | Protein of unknown function (DUF3411) ... 57 2e-09
AT3G08630.1 | Symbols: | Protein of unknown function (DUF3411) ... 57 2e-09
AT3G56140.1 | Symbols: | Protein of unknown function (DUF399 an... 52 6e-08
AT3G08640.1 | Symbols: | Protein of unknown function (DUF3411) ... 52 8e-08
AT2G40400.2 | Symbols: | Protein of unknown function (DUF399 an... 51 2e-07
AT2G40400.1 | Symbols: | Protein of unknown function (DUF399 an... 51 2e-07
>AT5G22790.1 | Symbols: RER1 | reticulata-related 1 |
chr5:7599395-7601573 REVERSE LENGTH=433
Length = 433
Score = 152 bits (385), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 78/90 (86%)
Query: 1 MNAKRSISKSEEDIPIPPLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKKVPLV 60
M AKRS+ KSEED+PIPPL +SAALWG FL +SSN RYQIINGLE +VE S AK++P+V
Sbjct: 344 MTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVV 403
Query: 61 AMAFTVGVRFGNNIYGGMQFVDWAKWSGVQ 90
AMAFTVGVRF NN+YGGMQFVDWAK SGVQ
Sbjct: 404 AMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433
>AT2G37860.3 | Symbols: LCD1 | Protein of unknown function (DUF3411)
| chr2:15856952-15858793 FORWARD LENGTH=432
Length = 432
Score = 150 bits (378), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 70/90 (77%), Positives = 79/90 (87%)
Query: 1 MNAKRSISKSEEDIPIPPLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKKVPLV 60
M AKR+I+KSEE+IP+PPL++SAALWG FL+VSSNTRYQIINGLE +VEASP AKK P
Sbjct: 343 MTAKRNINKSEENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPA 402
Query: 61 AMAFTVGVRFGNNIYGGMQFVDWAKWSGVQ 90
AMAFTVGVR NNIYGGMQFVDWA+ SG Q
Sbjct: 403 AMAFTVGVRLANNIYGGMQFVDWARLSGCQ 432
>AT5G12470.1 | Symbols: | Protein of unknown function (DUF3411) |
chr5:4044950-4047290 REVERSE LENGTH=386
Length = 386
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 1 MNAKRSISK-SEEDIPIPPLLQSAALWGFFLAVSSNTRYQIINGL--ESLVEASPVAKKV 57
+ A++++ + SE ++ P++ ++ +G ++AVSSN RYQI+ G+ + L+E K+
Sbjct: 293 IKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKL 352
Query: 58 PLVAMAFTVGVRFGNNIYGGMQFVDWAKWSGVQ 90
L A+ F VR GN G + +VD+A+ G+Q
Sbjct: 353 ALSALCF--AVRTGNTFLGSLLWVDYARLIGIQ 383
>AT3G08630.1 | Symbols: | Protein of unknown function (DUF3411) |
chr3:2620943-2621962 FORWARD LENGTH=339
Length = 339
Score = 57.0 bits (136), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 17 PPLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKKVPLVAMAFTVGVRFGNNIYG 76
PP L ++ W + VS+N RYQ +NG E L+E S PLV + +R NN+ G
Sbjct: 250 PPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKS----LPPLVFKTSVIALRVVNNVLG 305
Query: 77 GMQFVDWAKWSGVQ 90
GM FV A+ +G Q
Sbjct: 306 GMSFVTLARMTGSQ 319
>AT3G56140.1 | Symbols: | Protein of unknown function (DUF399 and
DUF3411) | chr3:20829407-20832669 FORWARD LENGTH=745
Length = 745
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 1 MNAKRSISKSE----EDIPIPPLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKK 56
+N R + K E E PLL++A ++G FL S+N RYQII GL + ++ +
Sbjct: 616 LNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQIIAGLIEHRLSDELSSQ 675
Query: 57 VPLVAMAFTVGVRFGNNIYGGMQFVDWAKWSGVQ 90
PL+ A + VR N+ +G Q++D A+ +G+Q
Sbjct: 676 -PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708
>AT3G08640.1 | Symbols: | Protein of unknown function (DUF3411) |
chr3:2622992-2624005 FORWARD LENGTH=337
Length = 337
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 17 PPLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKKV-PLVAMAFTVGVRFGNNIY 75
PP + ++ W + VS+N RYQ +NG+E L +AK + PLV + +R NN+
Sbjct: 253 PPTVLNSLTWATHMGVSANARYQTLNGIEFL-----LAKVLPPLVFKTSVIVLRCANNVA 307
Query: 76 GGMQFVDWAKWSGVQ 90
GGM FV A+ +G Q
Sbjct: 308 GGMSFVLLARMTGSQ 322
>AT2G40400.2 | Symbols: | Protein of unknown function (DUF399 and
DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735
Length = 735
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 18 PLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKKVPLVAMAFTVGVRFGNNIYGG 77
P+L++A ++G +L SSN RYQII GL + ++ + PL+ + VR N+ +G
Sbjct: 628 PMLKTALVYGGYLGTSSNIRYQIIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGT 686
Query: 78 MQFVDWAKWSGVQ 90
Q++D A+ +G+Q
Sbjct: 687 QQWIDLARSTGLQ 699
>AT2G40400.1 | Symbols: | Protein of unknown function (DUF399 and
DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735
Length = 735
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 18 PLLQSAALWGFFLAVSSNTRYQIINGLESLVEASPVAKKVPLVAMAFTVGVRFGNNIYGG 77
P+L++A ++G +L SSN RYQII GL + ++ + PL+ + VR N+ +G
Sbjct: 628 PMLKTALVYGGYLGTSSNIRYQIIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGT 686
Query: 78 MQFVDWAKWSGVQ 90
Q++D A+ +G+Q
Sbjct: 687 QQWIDLARSTGLQ 699