Miyakogusa Predicted Gene

Lj3g3v1128930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1128930.1 tr|Q9ZUY6|Q9ZUY6_ARATH At2g27860/F15K20.4
OS=Arabidopsis thaliana GN=AXS1 PE=2 SV=1,93.33,5e-18,
,NODE_17711_length_517_cov_780.570618.path1.1
         (45 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G27860.1 | Symbols: AXS1 | UDP-D-apiose/UDP-D-xylose synthase...    95   8e-21
AT1G08200.1 | Symbols: AXS2 | UDP-D-apiose/UDP-D-xylose synthase...    89   8e-19

>AT2G27860.1 | Symbols: AXS1 | UDP-D-apiose/UDP-D-xylose synthase 1
           | chr2:11864684-11866843 REVERSE LENGTH=389
          Length = 389

 Score = 95.1 bits (235), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 42/45 (93%), Positives = 44/45 (97%)

Query: 1   MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKAIAKPIAS 45
           MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKA +KP+AS
Sbjct: 345 MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKATSKPVAS 389


>AT1G08200.1 | Symbols: AXS2 | UDP-D-apiose/UDP-D-xylose synthase 2
           | chr1:2574259-2576609 REVERSE LENGTH=389
          Length = 389

 Score = 88.6 bits (218), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/45 (88%), Positives = 43/45 (95%)

Query: 1   MTIINRQLGWNPKTSLWDLLESTLTYQHRTYAEAVKKAIAKPIAS 45
           MTIINRQLGWNPKTSLWDLLESTLTYQH TYAEA+KKA +KP+AS
Sbjct: 345 MTIINRQLGWNPKTSLWDLLESTLTYQHTTYAEAIKKATSKPVAS 389