Miyakogusa Predicted Gene

Lj3g3v1124780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1124780.1 tr|C1MSU1|C1MSU1_MICPC CorA metal ion transporter
family OS=Micromonas pusilla (strain CCMP1545)
GN=,47.22,6e-19,SUBFAMILY NOT NAMED,NULL; RNA SPLICING PROTEIN MRS2,
MITOCHONDRIAL,Magnesium transporter MRS2/LPE10;,CUFF.42243.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G22830.1 | Symbols: ATMGT10, GMN10, MGT10, MRS2-11 | magnesiu...   204   2e-53

>AT5G22830.1 | Symbols: ATMGT10, GMN10, MGT10, MRS2-11 | magnesium
           (Mg) transporter 10 | chr5:7627676-7630633 FORWARD
           LENGTH=459
          Length = 459

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 101/159 (63%), Positives = 109/159 (68%)

Query: 1   MLLDLLEDPDEIRRICIMGRNCILNRGNHNVECSLPSEKQXXXXXXXXXXXXXXNYLQRC 60
           MLLDLLEDP EIRRICIMGRNC L RG+ ++EC+LPS+K               NYLQRC
Sbjct: 301 MLLDLLEDPHEIRRICIMGRNCTLRRGDDDLECTLPSDKLIAEEEEEEIEMLLENYLQRC 360

Query: 61  ESCHGQAERLLDSAREMEDSIGXXXXXXXXXXXXXXXXXQVGTFCVAVGALVAGIFGMNL 120
           ESCHGQAERLLDSA+EMEDSI                  QVGTFCVAVGAL+AGIFGMNL
Sbjct: 361 ESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRFELLLQVGTFCVAVGALIAGIFGMNL 420

Query: 121 KSYLEEQVLAFWLTTAXXXXXXXXAFFLMYSYLRARKIF 159
           +SYLEEQ  AFWLTT         AFFLMYSYL  RKIF
Sbjct: 421 RSYLEEQASAFWLTTGGIIIGAAVAFFLMYSYLSRRKIF 459