Miyakogusa Predicted Gene

Lj3g3v1113140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1113140.1 tr|G7IU62|G7IU62_MEDTR Alpha-L-fucosidase
OS=Medicago truncatula GN=MTR_2g095700 PE=4
SV=1,76.68,0,(Trans)glycosidases,Glycoside hydrolase, superfamily;
Galactose-binding
domain-like,Galactose-bindin,
NODE_48294_length_1872_cov_64.214745.path1.1
         (538 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28100.1 | Symbols: ATFUC1, FUC1 | alpha-L-fucosidase 1 | chr...   634   0.0  

>AT2G28100.1 | Symbols: ATFUC1, FUC1 | alpha-L-fucosidase 1 |
           chr2:11974803-11976489 FORWARD LENGTH=506
          Length = 506

 Score =  634 bits (1636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/443 (66%), Positives = 362/443 (81%), Gaps = 4/443 (0%)

Query: 65  QLQWQQGNMALFFHFGTNTFTDAEWGSGRVHPTIFNPTKLDASQWIRVAKESGFSRVLLT 124
           QLQWQ G+MA+F HFG NTFTD+EWG+G+ +P+IFNPT L+ASQW+++AK+SGFSRV+LT
Sbjct: 42  QLQWQLGSMAMFLHFGPNTFTDSEWGTGKANPSIFNPTHLNASQWVQIAKDSGFSRVILT 101

Query: 125 AKHHDGFCLWPSDYTDYSVRSSKWRNGTGDVLGELAAAARDAGVGLGVYLSPWDRHDPSY 184
           AKHHDGFCLWPS+YTDYSV+SS+WRNG GDV+ ELA+AA++AG+GLG+YLSPWDRH+  Y
Sbjct: 102 AKHHDGFCLWPSEYTDYSVKSSQWRNGAGDVVAELASAAKEAGIGLGLYLSPWDRHEQCY 161

Query: 185 GDTLRYNEFYLGQMTELLTRYGEIKDVFLDGAKGEGEKDMDYLFQSWFSLIHQLQPGSTI 244
           G TL YNEFYL QMTELLT+YGEIK+V+LDGAKG+GEKDM+Y F +WFSLIHQLQP + I
Sbjct: 162 GKTLEYNEFYLSQMTELLTKYGEIKEVWLDGAKGDGEKDMEYFFDTWFSLIHQLQPKAVI 221

Query: 245 FGDSGPDVRWVGNEAGIGGSTSWSSFNRSLSKIGGPVDPEYQQQGDPLGPDWAPALCDVS 304
           F D+GPDVRW+G+EAG+ GST WS FNR+ +KIG   +P Y Q+GD  G DW PA CDVS
Sbjct: 222 FSDAGPDVRWIGDEAGLAGSTCWSLFNRTNAKIGD-TEPSYSQEGDGYGQDWVPAECDVS 280

Query: 305 IRPGWFWHASESPKSARTLLDLYYKSVGRNCKLLLNVPPNTSGLISPEDIQVLREFSELR 364
           IRPGWFWHASESPK A  LLD+YY SVGRNC  LLNVPPN+SGLIS +DI+VL EFSE++
Sbjct: 281 IRPGWFWHASESPKPAVQLLDIYYNSVGRNCLFLLNVPPNSSGLISEQDIKVLEEFSEMK 340

Query: 365 SSIFXXXXXXXXXXXXXXTRGGIQNSQFSPYSVLEEGLHSYWAPEECQSKWILYINLQEL 424
           +SIF               RG  Q+SQF P +VLEEGL  YWAPEE Q++W+LY+  ++L
Sbjct: 341 NSIFSNNLARKAFVNSSSIRGD-QSSQFGPKNVLEEGLDKYWAPEENQNEWVLYLEFKDL 399

Query: 425 VSFNVLQVQEPIHMGQRVIEFHLEALHQ-DGVWKRVVKGTTIGYQRLLLFPK-IKSQFLK 482
           VSFNVL+++EPIHMGQR+  FHLE      G W+RVV GTT+G +RLL F   ++S+ LK
Sbjct: 400 VSFNVLEIREPIHMGQRIASFHLETRKTGSGEWERVVSGTTVGNKRLLRFLNVVESRSLK 459

Query: 483 LIVDKSRADPLISYLGIYIDPFT 505
           L+VDK+R DPLISYLG+Y+D F+
Sbjct: 460 LVVDKARTDPLISYLGLYMDKFS 482