Miyakogusa Predicted Gene

Lj3g3v1102870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1102870.1 tr|G8A151|G8A151_MEDTR Dolichol kinase
OS=Medicago truncatula GN=MTR_117s0018 PE=4
SV=1,84.99,0,UNCHARACTERIZED,NULL; TRANSMEMBRANE PROTEIN
15-RELATED,NULL; seg,NULL,CUFF.42206.1
         (533 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G45040.1 | Symbols:  | phosphatidate cytidylyltransferase fam...   582   e-166

>AT3G45040.1 | Symbols:  | phosphatidate cytidylyltransferase family
           protein | chr3:16472801-16475702 REVERSE LENGTH=569
          Length = 569

 Score =  582 bits (1499), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 315/543 (58%), Positives = 389/543 (71%), Gaps = 14/543 (2%)

Query: 3   TSFFTGERIVVLFFISKILYSLPLSLLTHGVXXXXXXXXXXXXEIAVDSANSPF---AFR 59
           TSF TGER+VV   +S+IL SLPLSL++HG             EI V++  SPF    F 
Sbjct: 6   TSFVTGERVVVFVVVSRILLSLPLSLISHGFSLFLLSLSAFLVEIRVET--SPFLLSHFS 63

Query: 60  TRPAASSGILLGAVTLPSLILSKLVQSSRGFSLAQIQPQEIQYLTLQYWATSASVFTVLL 119
           +R  ASSGILLGAVTLPS+++SKLVQ SR  S+ + +  E+ ++T+QYWA SAS   +L+
Sbjct: 64  SRRGASSGILLGAVTLPSVMISKLVQLSRAISIHEAEQDELAHVTMQYWAASASCCAILI 123

Query: 120 FLAFAMR--RRGH-------WGVRLSLCFVFFQGVFCIAALATTSQIGLHPVLKLSWVFC 170
           +L+  M   R+         W  R+SL      GV C  +L+  S  GL+  LK+ W+  
Sbjct: 124 YLSVIMSQVRKDESLSSSSIWLTRVSLTGTVLYGVACFVSLSMISHTGLNTSLKMLWMLF 183

Query: 171 HGFASVKLIQHFLRIFPSCASIGEAFLVAAGIVLYFGDMLLLTIRKLCGLLESSELVTAE 230
           HG A+VKLI+H L  FPSCASIGEA LV +G+VLYFGD L  TI K+   L   +LV+  
Sbjct: 184 HGLAAVKLIRHLLCTFPSCASIGEALLVTSGLVLYFGDFLACTIAKIFEKLIPVDLVSIS 243

Query: 231 YKISRSEXXXXXXXXXXXXXXXXXXXKYIFQIWEWSINTASAESRRYYEFGRSLIFIASL 290
           Y I R+E                   +++  I+E S+    A  R   +  +S++F  SL
Sbjct: 244 YGIKRTETGIIVQGLLLGLLLFPMVFRFVLHIYESSLRKRDARQRNCSDAAKSVLFFVSL 303

Query: 291 GFVLIVIVPSWMQLVKQFHTHPFFWVLSFVFSEPSKRLSLCIYWVCIICVSVLRFYNISK 350
            F ++V VPSWMQ V  F+ HPF WVL+FVFSEP KRLSLCIYW+ +I VSV RFYNIS+
Sbjct: 304 LFFMVVAVPSWMQFVHDFNQHPFLWVLTFVFSEPLKRLSLCIYWILLIVVSVSRFYNISR 363

Query: 351 NSKIERILLRKYYHLMAVLMFSPALIFQPKFLDLAFGAALAVFLILEIIRVWRIWPLGQP 410
           +SK+ERILLRKYYHLMAVLMF PAL+ QPKFLDLAFGAALAVF+ LEIIR+WRI PLG+P
Sbjct: 364 SSKVERILLRKYYHLMAVLMFLPALVLQPKFLDLAFGAALAVFVALEIIRIWRIQPLGEP 423

Query: 411 INQFMNAFTDHRDSDLLIVSHFSLLLGCALPIWMSSGYNDRPLAPFAGILSLGIGDTMAS 470
           ++QFMNAFTDHRDS+ LIVSHFSLLLGCALPIWMSSG+NDR L+PFAGILSLGIGDTMAS
Sbjct: 424 LHQFMNAFTDHRDSEHLIVSHFSLLLGCALPIWMSSGFNDRALSPFAGILSLGIGDTMAS 483

Query: 471 MVGHKYGVLRWSKTGKKTVEGTAAGITSVLAACSLLLPLFASTGYILTQHWFSLPLAVTV 530
           MVGHKYGVLRWSKTGKKTVEGTAAGITS++A C +L+P+ AS GYIL+Q W+SL +AVT 
Sbjct: 484 MVGHKYGVLRWSKTGKKTVEGTAAGITSMMAVCFVLVPILASMGYILSQGWWSLLVAVTA 543

Query: 531 SGL 533
           +G+
Sbjct: 544 TGM 546