Miyakogusa Predicted Gene
- Lj3g3v1101550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1101550.1 tr|A9RY74|A9RY74_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_206826,32.5,6e-19,seg,NULL; DUF716,Protein of unknown
function DUF716, TMEM45; SUBFAMILY NOT NAMED,NULL; EPIDIDYMAL
ME,NODE_26858_length_1180_cov_47.900002.path1.1
(196 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 252 9e-68
AT1G55240.1 | Symbols: | Family of unknown function (DUF716) |... 82 2e-16
AT1G55230.1 | Symbols: | Family of unknown function (DUF716) |... 81 6e-16
AT5G19870.1 | Symbols: | Family of unknown function (DUF716) |... 66 1e-11
AT1G49470.1 | Symbols: | Family of unknown function (DUF716) |... 54 6e-08
>AT1G32120.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 4 anthesis, C globular stage, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s:
Aminotransferase-like, plant mobile domain
(InterPro:IPR019557), Protein of unknown function DUF716
(InterPro:IPR006904); BEST Arabidopsis thaliana protein
match is: Aminotransferase-like, plant mobile domain
family protein (TAIR:AT1G51538.1); Has 16736 Blast hits
to 9656 proteins in 576 species: Archae - 4; Bacteria -
1182; Metazoa - 7098; Fungi - 2631; Plants - 1178;
Viruses - 174; Other Eukaryotes - 4469 (source: NCBI
BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206
Length = 1206
Score = 252 bits (644), Expect = 9e-68, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 135/195 (69%)
Query: 1 MCIELFYSTHLKIFVGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXX 60
+CIE YSTHLK FV GVLNPSHMNDFEHSGML MFFILG + +L+EKTR +PLP+
Sbjct: 1009 LCIEFLYSTHLKFFVNGVLNPSHMNDFEHSGMLLMFFILGFIALLSEKTRLLPLPQEALC 1068
Query: 61 XXXXXXXXXXXXXXXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKG 120
HST+HKGLEG YH LLV+LIGLC++SS+AGA+ PTSFPVDLC G
Sbjct: 1069 LIAATAFTAECLLFFFHSTSHKGLEGYYHLLLVFLIGLCVISSIAGAICPTSFPVDLCNG 1128
Query: 121 IAITLQGIWFYQTAFVLYGPMLPDGCKIRDNSITCHSDDSEVRGEXXXXXXXXXXXXXXX 180
IA+TLQG+WFYQTAF LYGPM+P GC ++ NS+ C S DSEV GE
Sbjct: 1129 IAMTLQGLWFYQTAFTLYGPMMPQGCSLKQNSVVCRSVDSEVSGEFLANFQLFSLVLAVL 1188
Query: 181 XGTLASYAYAASKYG 195
+ SY +AAS++G
Sbjct: 1189 VCVVGSYVFAASRFG 1203
>AT1G55240.1 | Symbols: | Family of unknown function (DUF716) |
chr1:20605015-20606185 FORWARD LENGTH=311
Length = 311
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 15 VGGVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTR-FVPLPEGXXXXXXXXXXXXXXXX 73
V G + +H+++FEHS + F + V+ ++ ++ R EG
Sbjct: 79 VDGTIPSNHLHNFEHSSISMSFLVYAVLALVLDRARPRAAASEGLTMLAAAAAFSQQLLL 138
Query: 74 XXXHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQT 133
HST H G+EG YH +L +I + +L+++ G LP SF V L + +I QG+W
Sbjct: 139 FHFHSTDHMGVEGQYHVILQVVIFVSLLTTIMGIFLPKSFLVSLVRSSSIAFQGVWLIVI 198
Query: 134 AFVLYGP-MLPDGCKIRDNS----ITCHSDDSEVRGE 165
+LY P ++P GC I D + C ++++ R +
Sbjct: 199 GCMLYTPSLIPKGCYIHDEGRHIIVKCSTEEALHRAK 235
>AT1G55230.1 | Symbols: | Family of unknown function (DUF716) |
chr1:20602895-20603797 FORWARD LENGTH=300
Length = 300
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 17 GVLNPSHMNDFEHSGMLFMFFILGV-VIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXX 75
G + +H+++FEHS + F + + ++L ++ R + G
Sbjct: 81 GTIPSNHLHNFEHSSISMSFLVYAIFAVVLDQERRRSNISHGLTMLVASSAFAQQLFLFH 140
Query: 76 XHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAF 135
HS H G+EG YH LL +I + L+++ G LP SF V + +IT QG+WF +
Sbjct: 141 LHSADHMGIEGQYHKLLQLIIFVSFLTTLIGITLPKSFLVSFVRSSSITFQGVWFVVMGY 200
Query: 136 VLYGP-MLPDGCKIRDNS----ITCHSDDSEVRGE 165
+L+ P ++P GC + + I C SD + R +
Sbjct: 201 MLWTPSLIPKGCFLHEEEGHQVIKCSSDKAIHRAK 235
>AT5G19870.1 | Symbols: | Family of unknown function (DUF716) |
chr5:6716182-6717012 REVERSE LENGTH=276
Length = 276
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 17 GVLNPSHMNDFEHSGMLFMFFILGVVIILTEKTRFVPLP-EGXXXXXXXXXXXXXXXXXX 75
G + +H+++FEHS + F F I+ +KTR P+
Sbjct: 82 GTIPSNHLHNFEHSCISFTFITYAAFAIVFDKTR--PIAHRSLINLIAALAFAQQLFLFH 139
Query: 76 XHSTTHKGLEGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAF 135
HS+ H G+EG YH LL ++ + +++++ G LP+SF + + ++++ QGIW A
Sbjct: 140 FHSSDHTGVEGHYHLLLQLVVFVSLVTTLLGIALPSSFILSFVRSLSVSFQGIWLMSMAC 199
Query: 136 VLYGP-MLPDGC 146
+L+ P ++P C
Sbjct: 200 MLWTPSLVPKDC 211
>AT1G49470.1 | Symbols: | Family of unknown function (DUF716) |
chr1:18310554-18311462 FORWARD LENGTH=302
Length = 302
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 15/156 (9%)
Query: 25 NDFEHSGMLFMFFILGVVIILTEKTRFVPLPEGXXXXXXXXXXXXXXXXXXXHSTTHKGL 84
++ EH+ M I + E T L G HST H GL
Sbjct: 82 DNLEHASMFLHLIIFACFALFCELTLCSDLFSGLIGVLSASVFAQELFLLHFHSTDHSGL 141
Query: 85 EGCYHTLLVYLIGLCILSSVAGALLPTSFPVDLCKGIAITLQGIWFYQTAFVLYGP-MLP 143
EG YH LL + + S++A A P SF L I++ QG WF F+L+ P +P
Sbjct: 142 EGHYHFLLQLIAFVSFSSALASASFPKSFSAALFLPISVMFQGCWFLNMGFMLWIPEYVP 201
Query: 144 DGC-----KIRDN---------SITCHSDDSEVRGE 165
GC DN ++ C S +E+R +
Sbjct: 202 RGCVSNMSTSTDNNRRSVYHSGAVACESPGAEIRAK 237