Miyakogusa Predicted Gene

Lj3g3v1075010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1075010.1 Non Chatacterized Hit- tr|H9WV19|H9WV19_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,59.02,0.00000000007,seg,NULL,TC64357.path2.1
         (192 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G28360.1 | Symbols:  | SIT4 phosphatase-associated family pro...   134   3e-32
AT1G07990.1 | Symbols:  | SIT4 phosphatase-associated family pro...   134   4e-32
AT3G45190.1 | Symbols:  | SIT4 phosphatase-associated family pro...   105   1e-23

>AT2G28360.1 | Symbols:  | SIT4 phosphatase-associated family
           protein | chr2:12124604-12129879 REVERSE LENGTH=788
          Length = 788

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/147 (56%), Positives = 91/147 (61%), Gaps = 19/147 (12%)

Query: 46  EPSDMQVGNSSTNPFVDHDESGNNLSSKPELGXXXXXXXXXGETVSSNGLPSTIDSMEGI 105
           EPSDMQV +SS NPF+D       L  KPE             +   +  PS        
Sbjct: 661 EPSDMQVTSSSLNPFIDVPM----LDVKPEPVIPNSSPTSSESSSLGHKSPS-------- 708

Query: 106 VESSQRSGAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKEN 165
                 S AV +LFEEDVEFVGVE EGTEKAMDQALKEGIVGEAGPLKRN+V KV E EN
Sbjct: 709 ------SPAVRALFEEDVEFVGVEPEGTEKAMDQALKEGIVGEAGPLKRNIVQKVPENEN 762

Query: 166 SEEGGAGVKEFNDTNYWRVDQEVAVLE 192
             E  +GV EFND N+WRVDQEV VLE
Sbjct: 763 QAE-NSGVTEFNDANFWRVDQEVTVLE 788


>AT1G07990.1 | Symbols:  | SIT4 phosphatase-associated family
           protein | chr1:2477413-2482898 FORWARD LENGTH=802
          Length = 802

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/189 (46%), Positives = 108/189 (57%), Gaps = 26/189 (13%)

Query: 5   AMNFESENTSASHDTGFFRFEASDK-EGSYGDRPMPDWVGWGEPSDMQVGNSSTNPFVDH 63
           A+N    N        FF F  S K E ++ ++P P+WVGWGEPSDMQ   +  NPF+D 
Sbjct: 639 ALNTTETNFQMESPLDFFDFNTSQKAEEAFAEQP-PEWVGWGEPSDMQASGTGLNPFIDD 697

Query: 64  DESGNNLSSKPELGXXXXXXXXXGETVSSNGLPSTIDSMEGIVESSQRSGAVPSLFEEDV 123
           D+      SK  +           E++  NG              S+RS     LFE+DV
Sbjct: 698 DDDD---DSKHIMNLDIPMAEVKSESMIPNG--------------SERS-----LFEKDV 735

Query: 124 EFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEEGGAGVKEFNDTNYWR 183
           EFVGVE EG EKAM+QA+KEGIVGEAG +K+N   ++AE    EE   GVKEFND NYW+
Sbjct: 736 EFVGVEPEGAEKAMEQAMKEGIVGEAGVMKKN--KEMAEDSKPEESSGGVKEFNDNNYWK 793

Query: 184 VDQEVAVLE 192
           VDQEV VLE
Sbjct: 794 VDQEVGVLE 802


>AT3G45190.1 | Symbols:  | SIT4 phosphatase-associated family
           protein | chr3:16541994-16548161 REVERSE LENGTH=789
          Length = 789

 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/82 (65%), Positives = 65/82 (79%), Gaps = 3/82 (3%)

Query: 111 RSGAVPSLFEEDVEFVGVELEGTEKAMDQALKEGIVGEAGPLKRNMVPKVAEKENSEEGG 170
           RS  VPSLF +DVEFVGVE EGTE+AMDQALKEGIVGEAGP+KRN       KE+ ++  
Sbjct: 711 RSPPVPSLFGKDVEFVGVEPEGTERAMDQALKEGIVGEAGPMKRNTTTASPGKESPDD-- 768

Query: 171 AGVKEFNDTNYWRVDQEVAVLE 192
             ++E+NDTNYW+VDQEV V+E
Sbjct: 769 -SMQEYNDTNYWKVDQEVTVVE 789