Miyakogusa Predicted Gene
- Lj3g3v1064840.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1064840.1 Non Chatacterized Hit- tr|D8TA08|D8TA08_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,36.57,8e-19,Calcium-dependent phosphotriesterase,NULL;
seg,NULL; NHL,NHL repeat; no description,Six-bladed beta-,CUFF.42126.1
(274 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14860.2 | Symbols: | NHL domain-containing protein | chr3:4... 397 e-111
AT3G14860.1 | Symbols: | NHL domain-containing protein | chr3:4... 397 e-111
AT1G23880.1 | Symbols: | NHL domain-containing protein | chr1:8... 228 4e-60
AT1G70280.2 | Symbols: | NHL domain-containing protein | chr1:2... 226 2e-59
AT1G70280.1 | Symbols: | NHL domain-containing protein | chr1:2... 221 3e-58
AT5G14890.1 | Symbols: | NHL domain-containing protein | chr5:4... 198 4e-51
AT1G23890.2 | Symbols: | NHL domain-containing protein | chr1:8... 152 3e-37
AT1G23890.1 | Symbols: | NHL domain-containing protein | chr1:8... 151 4e-37
AT1G56500.1 | Symbols: | haloacid dehalogenase-like hydrolase f... 50 2e-06
>AT3G14860.2 | Symbols: | NHL domain-containing protein |
chr3:4998591-5000894 REVERSE LENGTH=493
Length = 493
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/238 (79%), Positives = 216/238 (90%), Gaps = 3/238 (1%)
Query: 18 SLHFQAQAAPSGSLIKHLSSIVKWTR-SNSKTPQSDGNVLQFEDGYAVETIAQGNDIGVV 76
S FQAQAAPSGSLIKH+SS++KWT S+SK QSD NVLQFE+GY VET+ +GNDIGVV
Sbjct: 32 SFPFQAQAAPSGSLIKHMSSVLKWTTGSSSKLSQSDTNVLQFENGYLVETVVEGNDIGVV 91
Query: 77 PYGIRVNKEDGELFAVDAMNSNIVRITPPISQYSRGRLVAGSFQGYTGHVDGKPSDARFN 136
PY IRV+ +DGEL+AVD +NSNI++ITPP+SQYSRGRLVAGSFQG TGH DGKPS+ARFN
Sbjct: 92 PYKIRVS-DDGELYAVDELNSNIMKITPPLSQYSRGRLVAGSFQGKTGHADGKPSEARFN 150
Query: 137 HPRGIALDDKGNVYVADTENLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDL 196
HPRG+ +DDKGNVYVADT NLAIRKIGD+GVTTIAGGKSN+AGYRDGPSEDAKFSNDFD+
Sbjct: 151 HPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGKSNIAGYRDGPSEDAKFSNDFDV 210
Query: 197 VYVRPTCSLLVIDRGNAALRQIFLNQEDCDYQ-SSSISMIDILTVVGAVIVGYAVCML 253
VYVRPTCSLLVIDRGNAALRQI L++EDCDYQ SSIS+ DIL V+GAV++GYA CML
Sbjct: 211 VYVRPTCSLLVIDRGNAALRQISLSEEDCDYQDDSSISLTDILLVIGAVLIGYATCML 268
>AT3G14860.1 | Symbols: | NHL domain-containing protein |
chr3:4998591-5000894 REVERSE LENGTH=492
Length = 492
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 190/238 (79%), Positives = 216/238 (90%), Gaps = 3/238 (1%)
Query: 18 SLHFQAQAAPSGSLIKHLSSIVKWTR-SNSKTPQSDGNVLQFEDGYAVETIAQGNDIGVV 76
S FQAQAAPSGSLIKH+SS++KWT S+SK QSD NVLQFE+GY VET+ +GNDIGVV
Sbjct: 32 SFPFQAQAAPSGSLIKHMSSVLKWTTGSSSKLSQSDTNVLQFENGYLVETVVEGNDIGVV 91
Query: 77 PYGIRVNKEDGELFAVDAMNSNIVRITPPISQYSRGRLVAGSFQGYTGHVDGKPSDARFN 136
PY IRV+ +DGEL+AVD +NSNI++ITPP+SQYSRGRLVAGSFQG TGH DGKPS+ARFN
Sbjct: 92 PYKIRVS-DDGELYAVDELNSNIMKITPPLSQYSRGRLVAGSFQGKTGHADGKPSEARFN 150
Query: 137 HPRGIALDDKGNVYVADTENLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDL 196
HPRG+ +DDKGNVYVADT NLAIRKIGD+GVTTIAGGKSN+AGYRDGPSEDAKFSNDFD+
Sbjct: 151 HPRGVTMDDKGNVYVADTLNLAIRKIGDSGVTTIAGGKSNIAGYRDGPSEDAKFSNDFDV 210
Query: 197 VYVRPTCSLLVIDRGNAALRQIFLNQEDCDYQ-SSSISMIDILTVVGAVIVGYAVCML 253
VYVRPTCSLLVIDRGNAALRQI L++EDCDYQ SSIS+ DIL V+GAV++GYA CML
Sbjct: 211 VYVRPTCSLLVIDRGNAALRQISLSEEDCDYQDDSSISLTDILLVIGAVLIGYATCML 268
>AT1G23880.1 | Symbols: | NHL domain-containing protein |
chr1:8436125-8438636 FORWARD LENGTH=545
Length = 545
Score = 228 bits (580), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/226 (51%), Positives = 161/226 (71%), Gaps = 7/226 (3%)
Query: 34 HLSSIVKWT-----RSNSKTPQSDGNVLQFEDGYAVETIAQGNDIGVVPYGIRVNKEDGE 88
H +S++KW ++ +KT ++++FE+GY+VET+ G+ +G+ PY I+V +GE
Sbjct: 99 HGTSLLKWLWSLSFKTTTKTAVPTKSMVKFENGYSVETVLDGSKLGIEPYSIQV-LSNGE 157
Query: 89 LFAVDAMNSNIVRITPPISQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPRGIALDDKGN 148
L +D+ NSNI +I+ +S YSR RLV GS +GY GHVDG+ DAR N+P+G+ +DD+GN
Sbjct: 158 LLILDSQNSNIYQISSSLSLYSRPRLVTGSPEGYPGHVDGRLRDARLNNPKGLTVDDRGN 217
Query: 149 VYVADTENLAIRKIGDAGVTTIAGGKS-NVAGYRDGPSEDAKFSNDFDLVYVRPTCSLLV 207
+YVADT N AIRKI +AGVTTIAGGK G+ DGPSEDAKFSNDFD+VY+ +CSLLV
Sbjct: 218 IYVADTVNNAIRKISEAGVTTIAGGKMVRGGGHVDGPSEDAKFSNDFDVVYLGSSCSLLV 277
Query: 208 IDRGNAALRQIFLNQEDCDYQSSSISMIDILTVVGAVIVGYAVCML 253
IDRGN A+R+I L+ +DC Q S + I +V AV GY + +L
Sbjct: 278 IDRGNQAIREIQLHFDDCADQYGSGFPLGIAVLVAAVFFGYMLALL 323
>AT1G70280.2 | Symbols: | NHL domain-containing protein |
chr1:26466086-26468471 REVERSE LENGTH=509
Length = 509
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 161/229 (70%), Gaps = 5/229 (2%)
Query: 29 GSLIKHLSSIVKWTRSNSKTPQ---SDGNVLQFEDGYAVETIAQGNDIGVVPYGIRVNKE 85
G + H SS++KW S T + + ++++FE+GY+VET+ G+ +G+ PY I V
Sbjct: 34 GFISNHGSSLMKWLWSLKTTTKTTIATRSMVKFENGYSVETVFDGSKLGIEPYSIEV-LP 92
Query: 86 DGELFAVDAMNSNIVRITPPISQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPRGIALDD 145
+GEL +D+ NSNI +I+ +S YSR RLV GS +GY GHVDG+ DA+ NHP+G+ +DD
Sbjct: 93 NGELLILDSENSNIYKISSSLSLYSRPRLVTGSPEGYPGHVDGRLRDAKLNHPKGLTVDD 152
Query: 146 KGNVYVADTENLAIRKIGDAGVTTIAGGKS-NVAGYRDGPSEDAKFSNDFDLVYVRPTCS 204
+GN+YVADT N AIRKI + GVTTIAGGK+ G+ DGPSEDAKFSNDFD+VYV +CS
Sbjct: 153 RGNIYVADTVNNAIRKISEGGVTTIAGGKTVRNGGHVDGPSEDAKFSNDFDVVYVGSSCS 212
Query: 205 LLVIDRGNAALRQIFLNQEDCDYQSSSISMIDILTVVGAVIVGYAVCML 253
LLVIDRGN A+R+I L+ +DC YQ S + I +V A GY + +L
Sbjct: 213 LLVIDRGNKAIREIQLHFDDCAYQYGSGFPLGIAVLVAAGFFGYMLALL 261
>AT1G70280.1 | Symbols: | NHL domain-containing protein |
chr1:26466086-26468116 REVERSE LENGTH=447
Length = 447
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 147/200 (73%), Gaps = 2/200 (1%)
Query: 55 VLQFEDGYAVETIAQGNDIGVVPYGIRVNKEDGELFAVDAMNSNIVRITPPISQYSRGRL 114
+++FE+GY+VET+ G+ +G+ PY I V +GEL +D+ NSNI +I+ +S YSR RL
Sbjct: 1 MVKFENGYSVETVFDGSKLGIEPYSIEV-LPNGELLILDSENSNIYKISSSLSLYSRPRL 59
Query: 115 VAGSFQGYTGHVDGKPSDARFNHPRGIALDDKGNVYVADTENLAIRKIGDAGVTTIAGGK 174
V GS +GY GHVDG+ DA+ NHP+G+ +DD+GN+YVADT N AIRKI + GVTTIAGGK
Sbjct: 60 VTGSPEGYPGHVDGRLRDAKLNHPKGLTVDDRGNIYVADTVNNAIRKISEGGVTTIAGGK 119
Query: 175 S-NVAGYRDGPSEDAKFSNDFDLVYVRPTCSLLVIDRGNAALRQIFLNQEDCDYQSSSIS 233
+ G+ DGPSEDAKFSNDFD+VYV +CSLLVIDRGN A+R+I L+ +DC YQ S
Sbjct: 120 TVRNGGHVDGPSEDAKFSNDFDVVYVGSSCSLLVIDRGNKAIREIQLHFDDCAYQYGSGF 179
Query: 234 MIDILTVVGAVIVGYAVCML 253
+ I +V A GY + +L
Sbjct: 180 PLGIAVLVAAGFFGYMLALL 199
>AT5G14890.1 | Symbols: | NHL domain-containing protein |
chr5:4818056-4821534 FORWARD LENGTH=754
Length = 754
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 154/235 (65%), Gaps = 15/235 (6%)
Query: 31 LIKHLSSIV-KWTRS---------NSKTPQSDGNVLQFEDGYAVETIAQGNDIGVVPYGI 80
L+ +++SI+ KW S +K+ S +++++E GY +ET+ G+ +G+ PY I
Sbjct: 37 LVTNVASILWKWLWSLQTSTTTTTTTKSGVSSRSMVKYESGYNMETVFDGSKLGIEPYAI 96
Query: 81 RVNKEDGELFAVDAMNSNIVRITPPISQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPRG 140
V+ GEL +D+ NSNI +I+ P+S+Y + +L++GS +GYTGHVDGK +AR N PRG
Sbjct: 97 EVSPNGGELIVLDSENSNIHKISMPLSRYGKPKLLSGSQEGYTGHVDGKLKEARMNRPRG 156
Query: 141 IALDDKGNVYVADTENLAIRKIGDAGVTTIAGGKSNVAGYRDGPSEDAKFSNDFDLVYVR 200
+A+DD+GN+YVADT N+AIRKI D GV+TIA G G ++ E +FS+DFDL+YV
Sbjct: 157 LAMDDRGNIYVADTINMAIRKISDDGVSTIAAGGRWSGGSKE---ESMRFSDDFDLIYVS 213
Query: 201 PTCSLLVIDRGNAALRQIFLNQEDCDYQSSSISMIDILT--VVGAVIVGYAVCML 253
+CSLLVIDRGN +++I L+ DC + + T +V AV GY + +L
Sbjct: 214 SSCSLLVIDRGNQLIKEIQLHDHDCSQPEPDTDSLHLGTALLVAAVFFGYMLALL 268
>AT1G23890.2 | Symbols: | NHL domain-containing protein |
chr1:8438900-8440803 REVERSE LENGTH=400
Length = 400
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 118/201 (58%), Gaps = 10/201 (4%)
Query: 58 FEDGYAVETIAQGNDIGVVPYGIRVNKEDGELFAVDAMNSNIVRITPPISQYSRGRLVAG 117
E+GY V T+ G+ G+ PY I L +D+ S + P+S S AG
Sbjct: 25 LEEGYEVTTVVDGHKSGLNPYTIHALPGSSNLIVLDSSGSTFYTTSFPLSVDSVINRFAG 84
Query: 118 SFQGYTGHVDGKPSDARFNHPRGIALDDKGNVYVADTENLAIRKIGDAG-VTTIAGGKSN 176
G +GHVDGK ++RF+ PRG A+D KGNVYVAD N AIRKI +G VTTIAGG S
Sbjct: 85 --DGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIAGGISK 142
Query: 177 VAGYRDGPSEDAKFSNDFDLVYVRPTCSLLVIDRGNAALRQIFLNQEDCDYQSSS----- 231
G+RDGP+++A FS+DF++ +V C LLV D GN +RQI L +EDC S S
Sbjct: 143 AFGHRDGPAQNATFSSDFEITFVPQRCCLLVSDHGNEMIRQINLKEEDCLENSHSNLGTY 202
Query: 232 --ISMIDILTVVGAVIVGYAV 250
S+ +L+ + V +G+AV
Sbjct: 203 SLWSIGIVLSCILGVAIGFAV 223
>AT1G23890.1 | Symbols: | NHL domain-containing protein |
chr1:8439321-8440803 REVERSE LENGTH=261
Length = 261
Score = 151 bits (382), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 118/201 (58%), Gaps = 10/201 (4%)
Query: 58 FEDGYAVETIAQGNDIGVVPYGIRVNKEDGELFAVDAMNSNIVRITPPISQYSRGRLVAG 117
E+GY V T+ G+ G+ PY I L +D+ S + P+S S AG
Sbjct: 25 LEEGYEVTTVVDGHKSGLNPYTIHALPGSSNLIVLDSSGSTFYTTSFPLSVDSVINRFAG 84
Query: 118 SFQGYTGHVDGKPSDARFNHPRGIALDDKGNVYVADTENLAIRKIGDAG-VTTIAGGKSN 176
G +GHVDGK ++RF+ PRG A+D KGNVYVAD N AIRKI +G VTTIAGG S
Sbjct: 85 --DGSSGHVDGKAGNSRFSKPRGFAVDAKGNVYVADKSNKAIRKISSSGSVTTIAGGISK 142
Query: 177 VAGYRDGPSEDAKFSNDFDLVYVRPTCSLLVIDRGNAALRQIFLNQEDCDYQSSS----- 231
G+RDGP+++A FS+DF++ +V C LLV D GN +RQI L +EDC S S
Sbjct: 143 AFGHRDGPAQNATFSSDFEITFVPQRCCLLVSDHGNEMIRQINLKEEDCLENSHSNLGTY 202
Query: 232 --ISMIDILTVVGAVIVGYAV 250
S+ +L+ + V +G+AV
Sbjct: 203 SLWSIGIVLSCILGVAIGFAV 223
>AT1G56500.1 | Symbols: | haloacid dehalogenase-like hydrolase
family protein | chr1:21159775-21167092 FORWARD
LENGTH=1055
Length = 1055
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 49 PQSDGNVLQF--EDGYAVETIAQGNDIGVVPYGIRVNKEDGELFAVDAMNSNIVRITPPI 106
P N+ +F DG E + Q P G+ + DG+++ D+ N I ++ P
Sbjct: 781 PYFSENLFKFGDNDGVGAEVLLQH------PLGV-LCANDGQIYLTDSYNHKIKKLDPVT 833
Query: 107 SQYSRGRLVAGSFQGYTGHVDGKPSDARFNHPRGIALDDKGNVYVADTENLAIRKI 162
R+V + G G DGK A+ + P G+A+ + G ++VADT N IR I
Sbjct: 834 K-----RVVTLAGTGKAGFKDGKVKGAQLSEPAGLAITENGRLFVADTNNSLIRYI 884
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 18/107 (16%)
Query: 90 FAVDAMNSNIVRITPPISQYSRGRLVA----GSF------QGYTGHVDGKPSDARFNHPR 139
A+D +N+ + IS + R++ G+F G G DG DA FN P+
Sbjct: 572 LAIDTLNNRLF-----ISDSNHNRIIVTDLEGNFIVQIGSSGEEGFQDGSFEDAAFNRPQ 626
Query: 140 GIALDDKGN-VYVADTENLAIRKIG--DAGVTTIAGGKSNVAGYRDG 183
G+A + K N +YVADTEN A+R+I + V T+AG + + Y+ G
Sbjct: 627 GLAYNAKKNLLYVADTENHALREIDFVNERVQTLAGNGTKGSDYQGG 673
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 77 PYGIRVNKEDGELFAVDAMNSNIVRITPPISQYSRGRLVAGSFQGYT------GHVDGKP 130
P GI + + E + D+ +S+I + Q RL+AG ++ G DG
Sbjct: 741 PSGISLGPDLKEAYIADSESSSIRALD---LQTGGSRLLAGGDPYFSENLFKFGDNDGVG 797
Query: 131 SDARFNHPRGIALDDKGNVYVADTENLAIRKIGDAG--VTTIAGGKSNVAGYRDGPSEDA 188
++ HP G+ + G +Y+ D+ N I+K+ V T+AG + AG++DG + A
Sbjct: 798 AEVLLQHPLGVLCANDGQIYLTDSYNHKIKKLDPVTKRVVTLAG--TGKAGFKDGKVKGA 855
Query: 189 KFSNDFDLVYVRPTCSLLVIDRGNAALRQIFLNQ-EDCD 226
+ S L + L V D N+ +R I LN+ ED +
Sbjct: 856 QLSEPAGLA-ITENGRLFVADTNNSLIRYIDLNKGEDSE 893