Miyakogusa Predicted Gene

Lj3g3v1063700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1063700.1 Non Chatacterized Hit- tr|I1M325|I1M325_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.29705 PE,81.47,0,miaA:
tRNA dimethylallyltransferase,tRNA delta(2)-isopentenylpyrophosphate
transferase; IPPT,tRNA is,CUFF.42119.1
         (447 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G20040.1 | Symbols: ATIPT9, IPT9 | isopentenyltransferase 9 |...   512   e-145
AT5G20040.3 | Symbols: IPT9 | isopentenyltransferase 9 | chr5:67...   505   e-143
AT5G20040.2 | Symbols: ATIPT9, IPT9 | isopentenyltransferase 9 |...   500   e-142
AT5G19040.1 | Symbols: ATIPT5, IPT5 | isopentenyltransferase 5 |...    90   3e-18
AT3G63110.1 | Symbols: ATIPT3, IPT3 | isopentenyltransferase 3 |...    89   5e-18
AT1G68460.1 | Symbols: ATIPT1, IPT1 | isopentenyltransferase 1 |...    88   1e-17
AT2G27760.1 | Symbols: ATIPT2, IPPT, IPT2 | tRNAisopentenyltrans...    84   2e-16
AT3G23630.1 | Symbols: ATIPT7, IPT7 | isopentenyltransferase 7 |...    80   4e-15
AT4G24650.1 | Symbols: ATIPT4, IPT4 | isopentenyltransferase 4 |...    75   1e-13
AT3G19160.1 | Symbols: ATIPT8, PGA22, IPT8 | ATP/ADP isopentenyl...    74   2e-13
AT1G25410.1 | Symbols: ATIPT6, IPT6 | isopentenyltransferase 6 |...    66   6e-11

>AT5G20040.1 | Symbols: ATIPT9, IPT9 | isopentenyltransferase 9 |
           chr5:6767939-6770980 REVERSE LENGTH=463
          Length = 463

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 251/395 (63%), Positives = 296/395 (74%), Gaps = 5/395 (1%)

Query: 51  SGPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           SGPTG+GKSRLAMELAKRLNGEI+SADSVQVY+GLD+GSAKPS  DRK VPHHL+DILHP
Sbjct: 56  SGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSDSDRKVVPHHLIDILHP 115

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKASAEVSSQVHL 170
           S+DYSVGQF++D RQATK I ++GRVPIV GGTGLYLRWF+YGKPDVPK S EV ++ H 
Sbjct: 116 SQDYSVGQFYDDGRQATKDILNRGRVPIVTGGTGLYLRWFMYGKPDVPKPSPEVIAEAHD 175

Query: 171 ELAKLQRNEDWDAAVQLVVKAGDPKAQFVASNDWYXXXXXXXXXXXXXXPPSAFRVPYES 230
            L   Q   +WDAAV+LVV AGDPKA  +  NDWY              PPS+FR+PY+S
Sbjct: 176 MLVGFQTEYNWDAAVELVVNAGDPKASSLPRNDWYRLRRSLEILKSTGSPPSSFRIPYDS 235

Query: 231 FTEQDGCSVADG--SEPSHMTTYGDAMETDSSKLDYDFLCFFLSSNRLDLYKSLDYRCED 288
           F        AD    + S        +ETD   LDYDFLCFFLSS R+ LY+S+D+RCED
Sbjct: 236 FRVNLVAPDADDFLEDGSSADISIQNIETD---LDYDFLCFFLSSPRVALYRSIDFRCED 292

Query: 289 MLLGRHGILSEAQWLLDIGLHPNSNSATRAIGYRQGMEYLLTCREQRGQSSAREFYKFLA 348
           ML G +G+LSEA+WLLD+GL PNSN ATRAIGYRQ MEYLL CR   G+SS REFY FL 
Sbjct: 293 MLSGPNGVLSEARWLLDLGLLPNSNPATRAIGYRQAMEYLLQCRRYEGESSPREFYAFLN 352

Query: 349 EFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYNYGNGSLLVPEHLSMPR 408
           +FQ ASRNFAKRQ+TWFR E +YHWL+ASKPL+++L  I+DAY      + +PE L M +
Sbjct: 353 KFQTASRNFAKRQMTWFRCEPMYHWLNASKPLDSILQCIYDAYESEAEMVEIPESLRMSK 412

Query: 409 DISDRRVAAKLKSYRSKNRHFVNGEDCSHILNWIR 443
           D+ D R A++LK YRSKNRHFV  EDCS +L WIR
Sbjct: 413 DVRDSREASELKGYRSKNRHFVRREDCSSVLEWIR 447


>AT5G20040.3 | Symbols: IPT9 | isopentenyltransferase 9 |
           chr5:6767939-6770980 REVERSE LENGTH=469
          Length = 469

 Score =  505 bits (1301), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/401 (62%), Positives = 296/401 (73%), Gaps = 11/401 (2%)

Query: 51  SGPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           SGPTG+GKSRLAMELAKRLNGEI+SADSVQVY+GLD+GSAKPS  DRK VPHHL+DILHP
Sbjct: 56  SGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSDSDRKVVPHHLIDILHP 115

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKASAEVSSQVHL 170
           S+DYSVGQF++D RQATK I ++GRVPIV GGTGLYLRWF+YGKPDVPK S EV ++ H 
Sbjct: 116 SQDYSVGQFYDDGRQATKDILNRGRVPIVTGGTGLYLRWFMYGKPDVPKPSPEVIAEAHD 175

Query: 171 ELAKLQRNEDWDAAVQLVVKAGDPKAQFVASNDWYXXXXXXXXXXXXXXPPSAFRVPYES 230
            L   Q   +WDAAV+LVV AGDPKA  +  NDWY              PPS+FR+PY+S
Sbjct: 176 MLVGFQTEYNWDAAVELVVNAGDPKASSLPRNDWYRLRRSLEILKSTGSPPSSFRIPYDS 235

Query: 231 FTEQDGCSVADG--SEPSHMTTYGDAMETDSSKLDYDFLCFFLSSNRLDLYKSLDYRCED 288
           F        AD    + S        +ETD   LDYDFLCFFLSS R+ LY+S+D+RCED
Sbjct: 236 FRVNLVAPDADDFLEDGSSADISIQNIETD---LDYDFLCFFLSSPRVALYRSIDFRCED 292

Query: 289 MLLGRHGILSEAQWLLDIGLHPNSNSATRAIGYRQ------GMEYLLTCREQRGQSSARE 342
           ML G +G+LSEA+WLLD+GL PNSN ATRAIGYRQ       MEYLL CR   G+SS RE
Sbjct: 293 MLSGPNGVLSEARWLLDLGLLPNSNPATRAIGYRQVNSLFPAMEYLLQCRRYEGESSPRE 352

Query: 343 FYKFLAEFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYNYGNGSLLVPE 402
           FY FL +FQ ASRNFAKRQ+TWFR E +YHWL+ASKPL+++L  I+DAY      + +PE
Sbjct: 353 FYAFLNKFQTASRNFAKRQMTWFRCEPMYHWLNASKPLDSILQCIYDAYESEAEMVEIPE 412

Query: 403 HLSMPRDISDRRVAAKLKSYRSKNRHFVNGEDCSHILNWIR 443
            L M +D+ D R A++LK YRSKNRHFV  EDCS +L WIR
Sbjct: 413 SLRMSKDVRDSREASELKGYRSKNRHFVRREDCSSVLEWIR 453


>AT5G20040.2 | Symbols: ATIPT9, IPT9 | isopentenyltransferase 9 |
           chr5:6767939-6770980 REVERSE LENGTH=459
          Length = 459

 Score =  500 bits (1288), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/395 (62%), Positives = 293/395 (74%), Gaps = 9/395 (2%)

Query: 51  SGPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP 110
           SGPTG+GKSRLAMELAKRLNGEI+SADSVQVY+GLD+GSAKPS  DRK VPHHL+DILHP
Sbjct: 56  SGPTGAGKSRLAMELAKRLNGEIISADSVQVYKGLDVGSAKPSDSDRKVVPHHLIDILHP 115

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKASAEVSSQVHL 170
           S+DYSVGQF++D RQATK I ++GRVPIV GGTGLYLRWF+YGKPDVPK S EV ++ H 
Sbjct: 116 SQDYSVGQFYDDGRQATKDILNRGRVPIVTGGTGLYLRWFMYGKPDVPKPSPEVIAEAHD 175

Query: 171 ELAKLQRNEDWDAAVQLVVKAGDPKAQFVASNDWYXXXXXXXXXXXXXXPPSAFRVPYES 230
            L   Q   +WDAAV+LVV AGDPKA  +  NDWY              PPS+FR+PY+S
Sbjct: 176 MLVGFQTEYNWDAAVELVVNAGDPKASSLPRNDWYRLRRSLEILKSTGSPPSSFRIPYDS 235

Query: 231 FTEQDGCSVADG--SEPSHMTTYGDAMETDSSKLDYDFLCFFLSSNRLDLYKSLDYRCED 288
           F        AD    + S        +ETD   LDYDFLCFFLSS R+ LY+S+D+RCED
Sbjct: 236 FRVNLVAPDADDFLEDGSSADISIQNIETD---LDYDFLCFFLSSPRVALYRSIDFRCED 292

Query: 289 MLLGRHGILSEAQWLLDIGLHPNSNSATRAIGYRQGMEYLLTCREQRGQSSAREFYKFLA 348
           ML G +G+LSEA+WLLD+GL PNSN ATRAIGYRQ MEYLL CR   G+SS REFY FL 
Sbjct: 293 MLSGPNGVLSEARWLLDLGLLPNSNPATRAIGYRQAMEYLLQCRRYEGESSPREFYAFLN 352

Query: 349 EFQKASRNFAKRQLTWFRNERIYHWLDASKPLETVLNFIHDAYNYGNGSLLVPEHLSMPR 408
           +FQ ASRNFAKRQ+TWFR E +YHWL+ASKPL+++L  I+DAY      + +PE L M +
Sbjct: 353 KFQTASRNFAKRQMTWFRCEPMYHWLNASKPLDSILQCIYDAYESEAEMVEIPESLRMSK 412

Query: 409 DISDRRVAAKLKSYRSKNRHFVNGEDCSHILNWIR 443
           D+ D R A++LK YRSKNR     EDCS +L WIR
Sbjct: 413 DVRDSREASELKGYRSKNRR----EDCSSVLEWIR 443


>AT5G19040.1 | Symbols: ATIPT5, IPT5 | isopentenyltransferase 5 |
           chr5:6362389-6363381 REVERSE LENGTH=330
          Length = 330

 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 67/101 (66%), Gaps = 1/101 (0%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TG+GKSRLA++LA R   EIV++D +QVY+GLDI + K + ++   VPHHL+  +H +
Sbjct: 40  GATGTGKSRLAIDLATRFPAEIVNSDKIQVYKGLDIVTNKVTPEESLGVPHHLLGTVHDT 99

Query: 112 -EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
            ED++   F  +A +A + I  + RVPI+ GG+  Y+   +
Sbjct: 100 YEDFTAEDFQREAIRAVESIVQRDRVPIIAGGSNSYIEALV 140


>AT3G63110.1 | Symbols: ATIPT3, IPT3 | isopentenyltransferase 3 |
           chr3:23318437-23319447 REVERSE LENGTH=336
          Length = 336

 Score = 89.4 bits (220), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 67/103 (65%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TG+GKSRL++++A R   EI+++D +QV+QGLDI + K + ++   VPHHL+ +L P 
Sbjct: 48  GATGTGKSRLSVDIATRFRAEIINSDKIQVHQGLDIVTNKITSEESCGVPHHLLGVLPPE 107

Query: 112 EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGK 154
            D +   +   A  + + + ++G++PI+VGG+  Y+   +  K
Sbjct: 108 ADLTAANYCHMANLSIESVLNRGKLPIIVGGSNSYVEALVDDK 150


>AT1G68460.1 | Symbols: ATIPT1, IPT1 | isopentenyltransferase 1 |
           chr1:25668976-25670049 REVERSE LENGTH=357
          Length = 357

 Score = 88.2 bits (217), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 39/97 (40%), Positives = 66/97 (68%), Gaps = 1/97 (1%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TG+GKSRL+++LA R   EI+++D +QVY+GL+I + + +L DR+ VPHHL+ +++P 
Sbjct: 72  GATGAGKSRLSVDLATRFPSEIINSDKIQVYEGLEITTNQITLQDRRGVPHHLLGVINPE 131

Query: 112 E-DYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYL 147
             + + G+F   A    K I  + +VPI+ GG+  ++
Sbjct: 132 HGELTAGEFRSAASNVVKEITSRQKVPIIAGGSNSFV 168


>AT2G27760.1 | Symbols: ATIPT2, IPPT, IPT2 |
           tRNAisopentenyltransferase 2 | chr2:11824860-11827432
           FORWARD LENGTH=466
          Length = 466

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 42/123 (34%), Positives = 73/123 (59%), Gaps = 6/123 (4%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           GPTGSGKS+LA++LA     EI++AD++Q+Y GLD+ + K ++D++K VPHHL+  +   
Sbjct: 27  GPTGSGKSKLAVDLASHFPVEIINADAMQIYSGLDVLTNKVTVDEQKGVPHHLLGTVSSD 86

Query: 112 EDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIY------GKPDVPKASAEVS 165
            +++   F +      + I  +  +P++VGGT  Y++  +          D  +  A+V+
Sbjct: 87  MEFTARDFRDFTVPLIEEIVSRNHIPVLVGGTHYYIQAVVSKFLLDDAAEDTEECCADVA 146

Query: 166 SQV 168
           S V
Sbjct: 147 SVV 149


>AT3G23630.1 | Symbols: ATIPT7, IPT7 | isopentenyltransferase 7 |
           chr3:8488878-8489867 FORWARD LENGTH=329
          Length = 329

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 1/101 (0%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDIL-HP 110
           G TGSGKSRLA++LA R  GEI+++D +Q+Y+GLD+ + K +  + + VPHHL+ +    
Sbjct: 41  GATGSGKSRLAIDLATRFQGEIINSDKIQLYKGLDVLTNKVTPKECRGVPHHLLGVFDSE 100

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFI 151
           + + +  Q+   A QA   +    ++PIV GG+  Y+   +
Sbjct: 101 AGNLTATQYSRLASQAISKLSANNKLPIVAGGSNSYIEALV 141


>AT4G24650.1 | Symbols: ATIPT4, IPT4 | isopentenyltransferase 4 |
           chr4:12720466-12721422 FORWARD LENGTH=318
          Length = 318

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 62/97 (63%), Gaps = 1/97 (1%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHP- 110
           G TGSGKS L+++LA     EI+++D +Q Y GL I + + +++DR+ VPHHL+  L+P 
Sbjct: 12  GATGSGKSSLSVDLALHFKAEIINSDKMQFYDGLKITTNQSTIEDRRGVPHHLLGELNPE 71

Query: 111 SEDYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYL 147
           + + +  +F   A +A   I  + ++PI+ GG+  Y+
Sbjct: 72  AGEVTAAEFRVMAAEAISEITQRKKLPILAGGSNSYI 108


>AT3G19160.1 | Symbols: ATIPT8, PGA22, IPT8 | ATP/ADP
           isopentenyltransferases | chr3:6621993-6623236 REVERSE
           LENGTH=330
          Length = 330

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 2/110 (1%)

Query: 52  GPTGSGKSRLAMELAKRLNGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILHPS 111
           G TGSGKS L+++LA R +GEIV++D +Q Y GL + + + S+ +R  VPHHL+  L P 
Sbjct: 50  GATGSGKSCLSIDLATRFSGEIVNSDKIQFYDGLKVTTNQMSILERCGVPHHLLGELPPD 109

Query: 112 E-DYSVGQFFEDARQATKCIFDKGRVPIVVGGTGLYLRWFIYGKPDVPKA 160
           + + +  +F   A ++   I  +G +PI+ GG+  ++   +  + D PK 
Sbjct: 110 DSELTTSEFRSLASRSISEITARGNLPIIAGGSNSFIHALLVDRFD-PKT 158


>AT1G25410.1 | Symbols: ATIPT6, IPT6 | isopentenyltransferase 6 |
           chr1:8914191-8915219 REVERSE LENGTH=342
          Length = 342

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 59/95 (62%), Gaps = 2/95 (2%)

Query: 51  SGPTGSGKSRLAMELAKRL-NGEIVSADSVQVYQGLDIGSAKPSLDDRKEVPHHLVDILH 109
           +G TG+GKSRL+++LA R    EI+++D +Q+Y+G +I +    L ++  VPHHL+   H
Sbjct: 51  TGTTGTGKSRLSVDLATRFFPAEIINSDKMQIYKGFEIVTNLIPLHEQGGVPHHLLGQFH 110

Query: 110 PSE-DYSVGQFFEDARQATKCIFDKGRVPIVVGGT 143
           P + + +  +F   A  +   +    ++PIVVGG+
Sbjct: 111 PQDGELTPAEFRSLATLSISKLISSKKLPIVVGGS 145