Miyakogusa Predicted Gene

Lj3g3v1059130.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1059130.1 CUFF.42088.1
         (159 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    74   4e-14
AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    73   7e-14
AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidas...    63   8e-11

>AT1G67270.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25183177-25185793 REVERSE
           LENGTH=541
          Length = 541

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 2/153 (1%)

Query: 5   GLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKIXXXXXXXXXXXXXXXXXVN 64
           G++ Y  ++ S KL+LL F+CDE L++  +R+YI  +  +                    
Sbjct: 319 GVAAYEKMNASRKLKLLNFLCDESLSTWAMRNYINSQTEECGERKKEAKQKAAAAKQKEK 378

Query: 65  SLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQAHSEMLEAKEKIPKRK-ISD 123
            LKQK+Q E AK I        S E+  +++  +  E  +AH EM+EAK    K   I D
Sbjct: 379 QLKQKMQGEVAKSIMEKNGAPLSIEEHNSIVSQIRDEAKEAHEEMMEAKGMKSKMTLICD 438

Query: 124 ATRIEPHFVDGRK-VFWKFKCFEGEDTLLLQDI 155
           A R EP  +D    V WK KCFE E   LLQD+
Sbjct: 439 ARRTEPIMLDDNGFVLWKLKCFEEEQFFLLQDL 471


>AT5G38690.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr5:15479424-15482992 REVERSE
           LENGTH=572
          Length = 572

 Score = 73.2 bits (178), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 5/159 (3%)

Query: 1   MLNEGLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKIXXXXXXXXXXXXXXX 60
           M  +G+S Y  L+ S +L+LL F+CDE L +  +R+ I+ +N +                
Sbjct: 369 MFEKGISQYEKLNSSKRLKLLNFLCDETLGTLVMRNCIDSQNIESVERKKEAKEKINAAK 428

Query: 61  XXVNSLKQKLQEETAKRIHS-SGDPGSSTEQDAAVLKLLTTEVAQAHSEMLEAKEKIPKR 119
                LKQKLQ+E A+ + + +G P   TE DA V + +  E  + +SEM  A + + K+
Sbjct: 429 DKEKQLKQKLQDELAQAVKAKNGIPLLITEHDAIVSR-INAETQEVYSEMQNAIDMLSKK 487

Query: 120 KIS--DATRIEP-HFVDGRKVFWKFKCFEGEDTLLLQDI 155
                DA R  P    D   +FW+ K +  E  +LLQD+
Sbjct: 488 SQGSDDAVRTNPVELDDNGLIFWRLKSYNDEQNILLQDL 526


>AT1G67780.1 | Symbols:  | Zinc-finger domain of monoamine-oxidase A
           repressor R1 protein | chr1:25412816-25415530 FORWARD
           LENGTH=512
          Length = 512

 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 2/153 (1%)

Query: 5   GLSGYCNLSLSDKLRLLTFICDEVLNSEKVRSYIEKENSKIXXXXXXXXXXXXXXXXXVN 64
           G++ Y  +  S +L+LL F+CDE L++  +R+ I+ ++++                    
Sbjct: 315 GVAEYEKMDASRRLKLLNFVCDESLSTWAMRNCIKSQSTECKANNNEAKRKAAAAKEKEK 374

Query: 65  SLKQKLQEETAKRIHSSGDPGSSTEQDAAVLKLLTTEVAQAHSEMLEAKEKIPK-RKISD 123
            LKQKLQ + AK I        S E+   +L  +  E  +AH  M+EAK       +I D
Sbjct: 375 QLKQKLQGDLAKAIMKKNGAPLSIEEHNEILSQIRAEAKEAHDGMMEAKGITSGMTRICD 434

Query: 124 ATRIEPHFV-DGRKVFWKFKCFEGEDTLLLQDI 155
           A R EP  V D   V WK  C++ E   LLQD+
Sbjct: 435 ARRTEPIMVEDNGLVLWKLNCYDEEPKFLLQDL 467