Miyakogusa Predicted Gene

Lj3g3v1059100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1059100.1 tr|G7IKS1|G7IKS1_MEDTR Syntaxin-71 OS=Medicago
truncatula GN=MTR_2g093800 PE=4 SV=1,66.67,0.000000000000002,seg,NULL;
SUBFAMILY NOT NAMED,NULL; SYNTAXIN,NULL,gene.g46750.t1.1
         (155 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G09740.1 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 | ...   157   3e-39
AT3G45280.1 | Symbols: SYP72, ATSYP72 | syntaxin of plants 72 | ...   137   3e-33
AT3G61450.1 | Symbols: SYP73, ATSYP73 | syntaxin of plants 73 | ...   135   1e-32
AT3G61450.2 | Symbols: SYP73 | syntaxin of plants 73 | chr3:2273...   135   1e-32

>AT3G09740.1 | Symbols: SYP71, ATSYP71 | syntaxin of plants 71 |
           chr3:2989615-2991354 FORWARD LENGTH=266
          Length = 266

 Score =  157 bits (396), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 75/151 (49%), Positives = 97/151 (64%), Gaps = 2/151 (1%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           M+V+++  RVD IC+KYDKYD+DKQR+ N  GD +FARLY   E+ I+ AL K+E  + E
Sbjct: 1   MTVIDILTRVDSICKKYDKYDVDKQREANISGDDAFARLYGAFETQIETALEKAELVTKE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
           KN              K RL +E+PKL++L  K+VKGLT EE+  R DLV+ALP RI+AI
Sbjct: 61  KNRAAAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIEAI 120

Query: 121 PDGITAAANHTGGW--DATSSHPHIKFDSSG 149
           PDG       T  W   +T+S P IKFDS G
Sbjct: 121 PDGTAGGPKSTSAWTPSSTTSRPDIKFDSDG 151


>AT3G45280.1 | Symbols: SYP72, ATSYP72 | syntaxin of plants 72 |
           chr3:16611445-16613304 REVERSE LENGTH=267
          Length = 267

 Score =  137 bits (345), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 72/150 (48%), Positives = 98/150 (65%), Gaps = 2/150 (1%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           M V+++ FRVD IC+KYDKYDIDK R++ A GD +F+RL+ +++S I+A L K+E ASTE
Sbjct: 1   MPVIDIIFRVDEICKKYDKYDIDKHREIGASGDDAFSRLFTSIDSDIEAVLRKAELASTE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
           KN              K RL +++ KL+KL  KK+KGLT EE   R DLV+AL +R+QAI
Sbjct: 61  KNRAAAVAMNAEVRRTKARLAEDVVKLQKLAVKKIKGLTREERESRCDLVIALADRLQAI 120

Query: 121 PDGITAAANHTGG-W-DATSSHPHIKFDSS 148
           PDG    A      W  A++ + +IKFD S
Sbjct: 121 PDGNEHGAKQANSDWGGASAPNKNIKFDMS 150


>AT3G61450.1 | Symbols: SYP73, ATSYP73 | syntaxin of plants 73 |
           chr3:22738455-22739953 FORWARD LENGTH=263
          Length = 263

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 99/148 (66%), Gaps = 3/148 (2%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           M V++L  RVD IC+KY+KYDI++QR  N  GD +F+RLY  VE  ++  L K+E  S+E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
            N              K RL++ IPKL++L  KKVKGL+ EE+  R DLV++L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGITAAANHTGGWDATSSHPHIKFDSS 148
           P+   ++A   GGW+A++S+ +I+FD++
Sbjct: 121 PE---SSAPVVGGWEASTSYSNIRFDTN 145


>AT3G61450.2 | Symbols: SYP73 | syntaxin of plants 73 |
           chr3:22738455-22739953 FORWARD LENGTH=264
          Length = 264

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 99/148 (66%), Gaps = 3/148 (2%)

Query: 1   MSVVELFFRVDCICQKYDKYDIDKQRQLNAYGDYSFARLYVTVESIIQAALNKSEAASTE 60
           M V++L  RVD IC+KY+KYDI++QR  N  GD +F+RLY  VE  ++  L K+E  S+E
Sbjct: 1   MGVIDLITRVDSICKKYEKYDINRQRDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE 60

Query: 61  KNXXXXXXXXXXXXXXKGRLMDEIPKLRKLVNKKVKGLTNEEMTIRQDLVMALPERIQAI 120
            N              K RL++ IPKL++L  KKVKGL+ EE+  R DLV++L ++I+AI
Sbjct: 61  TNKAKAVAMNAEIRRTKARLLEGIPKLQRLSLKKVKGLSKEELDARNDLVLSLRDKIEAI 120

Query: 121 PDGITAAANHTGGWDATSSHPHIKFDSS 148
           P+   ++A   GGW+A++S+ +I+FD++
Sbjct: 121 PE---SSAPVVGGWEASTSYSNIRFDTN 145