Miyakogusa Predicted Gene
- Lj3g3v1036630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1036630.1 Non Chatacterized Hit- tr|D8RN21|D8RN21_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.76,1e-18,PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; seg,NULL; SUBFAMILY NOT NAMED,NULL;
FA,CUFF.42039.1
(400 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 339 2e-93
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 3e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 9e-29
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 124 1e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 120 2e-27
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 120 2e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 117 1e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 8e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 109 3e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 4e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 5e-24
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 7e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 2e-23
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 105 7e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 8e-23
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 1e-22
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 101 1e-21
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 8e-21
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 1e-20
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 97 1e-20
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 7e-20
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 1e-19
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 94 1e-19
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 93 3e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 1e-18
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 91 1e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 4e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 9e-18
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 1e-17
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 87 2e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 86 3e-17
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 7e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 9e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 1e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 84 3e-16
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 1e-15
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 1e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 5e-15
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 78 1e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 78 1e-14
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 77 2e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 72 5e-13
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 69 8e-12
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 68 9e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 9e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 9e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 1e-11
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 67 3e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 65 1e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 64 1e-10
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 62 6e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 2e-09
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 56 4e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 55 7e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 54 2e-07
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 52 5e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 9e-07
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 50 2e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 50 3e-06
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 339 bits (869), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 230/354 (64%), Gaps = 4/354 (1%)
Query: 41 LARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANL 100
LAR + KDWL P + + +++ PS + Y+ RKD+ PTE +I K A +
Sbjct: 51 LARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKM 110
Query: 101 LDPIHTLLH--QTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTF 158
D I ++ + KR FS++FF+ L+++Y ++A RI++A+E L MPDF CWPS ++F
Sbjct: 111 YDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSF 170
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
NF+LN+LV+ +L+D +++ +AP+L VE+DACC+NILIKGLC+ G L AA+++ DEFP+
Sbjct: 171 NFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQ 230
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
PNV TFS L+ G C KG EEAF+ LE+MEK + PD + FN+LI
Sbjct: 231 QKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEE 290
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+L+ M KG PN G+YQ+VLYGLLD KR +EA E++ M+S G PSF+S+K++V+
Sbjct: 291 GIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVL 350
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEI 392
GLC + E+DW LRQMV GFVP+ MW +V C VSK N + + +LD I
Sbjct: 351 GLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSK--NNDDSQANLDRI 402
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 172/358 (48%), Gaps = 10/358 (2%)
Query: 44 FQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTAR--KDFNPTEPFCTSLITKLAHANLL 101
F+ +TP Q L + ++ + TA + + ++ +L AN
Sbjct: 8 FKWSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKF 67
Query: 102 DPIHTLL-HQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNF 160
L+ ++ S+D ++ + Y V R D ++ M DF C PS++ +
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAYVT 126
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQ-GELSAAVKVFDEFPKS 219
VL +LV ++A + Y+ + + +N+LIK LC+ G + A +K+F E PK
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
G +P+ T+ TL+ GLC G ++EA + +M + P VV + LI
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
L+ M KG PNV +Y ++ GL R ++A+E+ E M++RG P+ V++ L+ G
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 306
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRNYESTCVSLDEILEG 395
LC+ ++ +E L +M QG P G++ +++ CA+SK R + LDE++ G
Sbjct: 307 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF---LDEMILG 361
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 8/251 (3%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
RID+A + M + C P+ T+ ++N L ++ D A E +E + +
Sbjct: 207 RIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYS 266
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
L+ GLC+ G A+++F+ G PN+ T++TL+ GLC++ ++EA E L++M
Sbjct: 267 SLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQ 326
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPN-------VGSYQQVLYGLLD 307
G+ PD ++ +I LD M+ G PN V + +V+ GL
Sbjct: 327 GLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC- 385
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGM 367
A A + M SRG + + LV LC+ ++ + ++V G +P G
Sbjct: 386 ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGT 445
Query: 368 WRHIVNCAVSK 378
W+ ++ + K
Sbjct: 446 WKLLIGHTLDK 456
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 169/354 (47%), Gaps = 13/354 (3%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCT--SLITKLAHANLLDPIHTL 107
L PK+ ++ + A+ + LY + T + T S++ KL+ A DP+ +L
Sbjct: 47 LFPKRLVSMITQQQNIDLALQIF-LYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESL 105
Query: 108 LHQTLKRRSF-----SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVL 162
+ R S+ ++ F L++ Y +A R + ++ L +PDF S R+ N +L
Sbjct: 106 MADL--RNSYPPIKCGENLFIDLLRNYG-LAGRYESSMRIFLRIPDFGVKRSVRSLNTLL 162
Query: 163 NVLVANRLYDVAGEVYEAAPR-LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
NVL+ N+ +D+ +++ + + + N+L+K LC++ ++ +A KV DE P GL
Sbjct: 163 NVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL 222
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
PN+ T++T++ G +G +E A LE+M G PD + VL+
Sbjct: 223 VPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAAT 282
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
V+D M + PN +Y ++ L K+ EA + + M+ R F+P +++ LC
Sbjct: 283 VMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEG 395
+ +E R+M++ +P + +++ + R E+ + DE +G
Sbjct: 343 EDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL-FDEFEKG 395
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D ++ LI LC++G ++ A K+FDEF K + P++ T++TL+ G+CEKG + EA
Sbjct: 365 DNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSLLTYNTLIAGMCEKGELTEAGRLW 423
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+ M + P+ +NVLI VL+ M+ G +PN ++ + GL
Sbjct: 424 DDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKL 483
Query: 309 KRFIEALEVVEGMVSRGFV 327
+ +A+++V V G V
Sbjct: 484 GKEEDAMKIVSMAVMNGKV 502
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 3/277 (1%)
Query: 88 CTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RIDKAVETLLSM 146
C L+ L N ++ + +L + + +T I L +VAR ++ A L M
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTI-LGGYVARGDMESAKRVLEEM 252
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
D +P T+ +++ + A V + + +E + ++I+ LC++ +
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
A +FDE + P+ ++ LCE V+EA KM K PD + + L
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I + D KG P++ +Y ++ G+ + EA + + M R
Sbjct: 373 IHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKC 431
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P+ ++ L+ GL ++ +E L +M+ G P
Sbjct: 432 KPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 468
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 7/279 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQT-LKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMP 147
+S+I A++ D + LL + L+ R + F + + Y A DKAV+ M
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGK-AHLPDKAVDLFHRMV 139
Query: 148 D-FQCWPSRRTFNFVLNVLVANRLYDVAGEVYE----AAPRLAVEVDACCMNILIKGLCQ 202
D F+C S ++FN VLNV++ LY E Y+ + + + + N++IK LC+
Sbjct: 140 DEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCK 199
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
+ A++VF P+ P+ T+ TLM GLC++ ++EA L++M+ G P V+
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 263 FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMV 322
+NVLI ++D M KG PN +Y +++GL + +A+ ++E MV
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
S +P+ V++ L+ GL + RR + L M +G+
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 108/230 (46%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R +D+A+E MP+ +C P T+ +++ L D A + +
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N+LI GLC++G+L+ K+ D G PN T++TL+HGLC KG +++A LE+M
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
P+ V + LI +L M +G++ N Y ++ GL + E
Sbjct: 321 SKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEE 380
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
A+ + M +G P+ V + LV GLCR + E L +M+ G +P
Sbjct: 381 AMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 123/285 (43%), Gaps = 5/285 (1%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVE 141
P E +LI L LD +LL + + + +D + TLI RR AV
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK-QRRATDAVR 348
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
L SM + ++ ++ +++ L + A ++ + + ++L+ GLC
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
++G+ + A ++ + SG PN T+S+LM G + G+ EEA + ++M+K G +
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM 321
++VLI V M+ G P+ +Y ++ GL AL++ M
Sbjct: 469 CYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Query: 322 VSR---GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ + P V++ L+ GLC + L M+ +G P
Sbjct: 529 LCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDP 573
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM------NILIKGLCQQG 204
C P+ T+N +++ L + G++ +A L V + C+ LI GL +Q
Sbjct: 288 CVPNEVTYNTLIHGLC------LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQR 341
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
+ AV++ + G N +S L+ GL ++G EEA KM + G P++VV++
Sbjct: 342 RATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
VL+ +L+ M+ G PN +Y ++ G EA++V + M
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKT 461
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
G + + L+ GLC R +E +M+ G P + I+
Sbjct: 462 GCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSII 509
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 146/346 (42%), Gaps = 29/346 (8%)
Query: 28 FCTQPNTDRDTAILARFQQKDWLTPKQAT--TLCNSLNHPSSAVTLLHLYTA--RKDFNP 83
C + D+ ++L R + P T TL N L A + L ++ + ++
Sbjct: 302 LCLKGKLDKAVSLLERMVSSKCI-PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 84 TEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETL 143
+ + LI+ L + +L + ++ + ++++ + ++A E L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 144 LSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQ 203
M C P+ T++ ++ L + A +V++ + + C ++LI GLC
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM---EKCGVCPDV 260
G + A+ V+ + G++P+ +S+++ GLC G ++ A + +M E+ PDV
Sbjct: 481 GRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDV 540
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS---------------------YQ 299
V +N+L+ +L+ M+ +G P+V + +
Sbjct: 541 VTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
+++ LL +R A +VE M+ + P ++ +V +C+ ++
Sbjct: 601 ELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKK 646
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 154/345 (44%), Gaps = 39/345 (11%)
Query: 66 SSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR-SFSDDFFFT 124
S+A+ L +L + + +F+P ++ +L + D + +L R F
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 125 LIKLYAHVARRIDKAVETLLSMPD-FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
LI+ YA + D+ + + M D F P +N +LN+LV + +
Sbjct: 124 LIESYAQFELQ-DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM----------- 232
++ D N+LIK LC+ +L A+ + ++ P GL P+ +TF+T+M
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242
Query: 233 ------------------------HGLCEKGMVEEAFEWLEKME-KCGVCPDVVVFNVLI 267
HG C++G VE+A ++++M + G PD FN L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
++D+M+++G+ P+V +Y V+ GL EA+EV++ M++R
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
P+ V++ L+ LC+ + EE R + +G +P + + ++
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 144/339 (42%), Gaps = 6/339 (1%)
Query: 28 FCTQPNTDRDTAILARFQQKDWLTPKQAT--TLCNSL---NHPSSAVTLLHLYTARKDFN 82
FC + + + +D P Q T TL N L H A+ ++ + ++ ++
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML-QEGYD 327
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVET 142
P S+I+ L + +L Q + R + + + ++++A E
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
+ P TFN ++ L R + VA E++E E D N+LI LC
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
+G+L A+ + + SG +V T++TL+ G C+ EA E ++ME GV + V
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 263 FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMV 322
+N LI ++D M+ +G P+ +Y +L +A ++V+ M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
S G P V++ L+ GLC+ R E LR + +G
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F LIK A ++ A+ L MP + P +TF V+ + D A + E
Sbjct: 192 FNVLIKALCR-AHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP-KSGLEPNVRTFSTLMHGLCEKGM 240
+N+++ G C++G + A+ E + G P+ TF+TL++GLC+ G
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V+ A E ++ M + G PDV +N +I VLD M+ + PN +Y
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ L + EA E+ + S+G +P +F L+ GLC R +M +G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 361 FVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGC 396
P + +++ SK + E+ + L GC
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ +AVE L M C P+ T+N +++ L + A E+ + D C N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI+GLC A+++F+E G EP+ T++ L+ LC KG ++EA L++ME
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G V+ +N LI + D M G N +Y ++ GL ++R +A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++++ M+ G P ++ L+ CR ++ ++ M G P + + +++
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 4/265 (1%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQ-TLKRRSFSDDFFFTLIKLYAHVARRID 137
K P E LI L LD +L Q L + S + TLI + A +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK-ANKTR 487
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A E M + T+N +++ L +R + A ++ + + D N L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
C+ G++ A + +G EP++ T+ TL+ GLC+ G VE A + L ++ G+
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFI-EAL 315
+N +I + +M+ + P+ SY+ V GL + I EA+
Sbjct: 608 LTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAV 667
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGL 340
+ + ++ +GFVP F S L GL
Sbjct: 668 DFLVELLEKGFVPEFSSLYMLAEGL 692
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 162/362 (44%), Gaps = 44/362 (12%)
Query: 51 TPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQ 110
+P + L S + P A + + + +F + LI KL + I +L
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVL-- 107
Query: 111 TLKRRS----FSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
K RS + + F LIK+YA A+ +K + T M +F P + N +L+VLV
Sbjct: 108 -AKHRSSGYPLTGEIFTYLIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 167 ANRLY-DVAGEVYEAAPRLAVE---------VDACCMN---------------------- 194
++R Y A E+++++ V + A C+N
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 195 ----ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
ILI+G C++G+++ A+++ D+ G P+ +++TL++ LC K + EA++ L +
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M+ G PD+V +N +I VLD M+ G PN SY+ ++ GL D
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
F E + +E M+S+GF P F LV G C + EE + +++ G W
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 371 IV 372
++
Sbjct: 406 VI 407
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 105/245 (42%), Gaps = 18/245 (7%)
Query: 156 RTFNFVLNVLVANRL--YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
R FN + +VL +R Y + GE++ LIK + + F
Sbjct: 98 RYFNLIDDVLAKHRSSGYPLTGEIF---------------TYLIKVYAEAKLPEKVLSTF 142
Query: 214 DEFPKSGLEPNVRTFSTLMHGL-CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ + P + + ++ L +G +++AFE + GV P+ +N+L+
Sbjct: 143 YKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL 202
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ M+ + P+V SY+ ++ G + A+E+++ M+++GFVP +S
Sbjct: 203 NDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLS 262
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEI 392
+ L+ LCR + E L +M +G P + + ++ + R ++ V D +
Sbjct: 263 YTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDML 322
Query: 393 LEGCN 397
GC+
Sbjct: 323 SNGCS 327
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 4/273 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEA 180
+ TLI Y + R+ID + L SM P+ ++N V+N L R+ +V+ + E
Sbjct: 243 YNTLIDGYCKL-RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
R +D N LIKG C++G A+ + E + GL P+V T+++L+H +C+ G
Sbjct: 302 NRR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGN 360
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+ A E+L++M G+CP+ + L+ VL M GF P+V +Y
Sbjct: 361 MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ G + +A+ V+E M +G P VS+ ++ G CR +E R+MV +G
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 361 FVPRMGMWRHIVNCAVSKPRNYESTCVSLDEIL 393
P + ++ + R E+ C +E+L
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEA-CDLYEEML 512
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 151/362 (41%), Gaps = 17/362 (4%)
Query: 14 LVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQATTL-CNSLNHPSSAVTLL 72
L TP L +Q D A++ +F +W P Q TL C + L
Sbjct: 42 LSANFTPEAASNLLLKSQ----NDQALILKFL--NWANPHQFFTLRCKCIT--------L 87
Query: 73 HLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHV 132
H+ T K + + + K + L +T + F ++K Y+ +
Sbjct: 88 HILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRL 147
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDAC 191
+ IDKA+ + P ++N VL+ + + R A V++ V +
Sbjct: 148 SL-IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVF 206
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
NILI+G C G + A+ +FD+ G PNV T++TL+ G C+ +++ F+ L M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
G+ P+++ +NV+I VL M R+G+ + +Y ++ G F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
+AL + M+ G PS +++ L+ +C+ L QM +G P + +
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386
Query: 372 VN 373
V+
Sbjct: 387 VD 388
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 17/296 (5%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAH-VARRIDKAVE 141
P E T+L+ + ++ + +L + + FS + H V +++ A+
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLRE-MNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
L M + P +++ VL+ + D A V ++ D + LI+G C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
+Q A +++E + GL P+ T++ L++ C +G +E+A + +M + GV PDVV
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ---------------QVLYGLL 306
++VLI +L + + P+ +Y ++ G
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
EA +V E M+ + P ++ ++ G CR + ++MV+ GF+
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 115/239 (48%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++ +A+E L M C+P T+ ++ + A ++ + D N
Sbjct: 219 KLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+L+ G+C++G L A+K ++ P SG +PNV T + ++ +C G +A + L M +
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G P VV FN+LI +L+ M + G PN SY +L+G K+ A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+E +E MVSRG P V++ ++ LC+ + E+ L Q+ +G P + + +++
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D+A++ L MP C P+ T N +L + + + A ++ R N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI LC++G L A+ + ++ P+ G +PN +++ L+HG C++ ++ A E+LE+M
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD+V +N ++ +L+ + KG P + +Y V+ GL A + +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+++++ M ++ P +++ LV GL R + +E + R G P + I+
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 96/185 (51%), Gaps = 3/185 (1%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N++I G C+ GE++ A+ V D S P+V T++T++ LC+ G +++A E L
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M + PDV+ + +LI +LD M +G P+V +Y ++ G+
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
R EA++ + M S G P+ ++ ++ +C R + + L M+R+GF P + +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 369 RHIVN 373
++N
Sbjct: 348 NILIN 352
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRID 137
RK F+P+ LI L LL +L + + + + + +++D
Sbjct: 337 RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMD 396
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A+E L M C+P T+N +L L + + A E+ N +I
Sbjct: 397 RAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVI 456
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
GL + G+ A+K+ DE L+P+ T+S+L+ GL +G V+EA ++ + E+ G+
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR 516
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P+ V FN ++ L M+ +G PN SY ++ GL EALE+
Sbjct: 517 PNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALEL 576
Query: 318 VEGMVSRGFV 327
+ + ++G +
Sbjct: 577 LNELCNKGLM 586
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 105/229 (45%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+ +A++ L MP C P+ ++N +L+ + D A E E D N
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
++ LC+ G++ AV++ ++ G P + T++T++ GL + G +A + L++M
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ PD + ++ L+ R G PN ++ ++ GL +++ A+
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAI 539
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
+ + M++RG P+ S+ L+ GL +E L ++ +G + +
Sbjct: 540 DFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKK 588
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 3/170 (1%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI+G C+ G+ A K+ + SG P+V T++ ++ G C+ G + A L++M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS--- 199
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V PDVV +N ++ VLD M+++ YP+V +Y ++ A+
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
++++ M RG P V++ LV G+C+ R +E L M G P +
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNV 309
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
++ + + GEL K + G P++ +TL+ G C G +A + LE +E G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PDV+ +NV+I VLD R P+V +Y +L L D+ + +A+E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLD---RMSVSPDVVTYNTILRSLCDSGKLKQAME 225
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
V++ M+ R P +++ L+ CR L +M +G P + + +VN
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 377 SKPR 380
+ R
Sbjct: 286 KEGR 289
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 149/332 (44%), Gaps = 4/332 (1%)
Query: 43 RFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLD 102
+F +K W T L + P A++L H Y F P +SLI KLA + D
Sbjct: 41 KFTRKPWEEVPFLTDL-KEIEDPEEALSLFHQYQ-EMGFRHDYPSYSSLIYKLAKSRNFD 98
Query: 103 PIHTLLHQTLKRR-SFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFV 161
+ +L R + F LI+ Y A +DKA++ + F C + ++ N +
Sbjct: 99 AVDQILRLVRYRNVRCRESLFMGLIQHYGK-AGSVDKAIDVFHKITSFDCVRTIQSLNTL 157
Query: 162 LNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
+NVLV N + A ++ A + + ++ NILIKG + + AA KVFDE + +
Sbjct: 158 INVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEV 217
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
+P+V T+++L+ LC + +A LE M K + P+ V F +L+
Sbjct: 218 QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKK 277
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
++ M +G P + +Y ++ L R EA ++ M R P V + LV LC
Sbjct: 278 LMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLC 337
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
R E L +M +G P +R +++
Sbjct: 338 TECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
+ A + M + + PS T+N ++ L N A + E + + +A +L
Sbjct: 203 EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLL 262
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+KGLC +GE + A K+ + G +P + + LM L ++G ++EA L +M+K +
Sbjct: 263 MKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRI 322
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PDVV++N+L+ VL M KG PN +Y+ ++ G + F L
Sbjct: 323 KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLN 382
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V+ M++ P+ +F +V GL + + + L M ++ G W+++++
Sbjct: 383 VLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
+ P +SL+ H+ + L+ Q ++ D F FT + + + +AV
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ M C P T+ V+N L D+A + + + +E D N +I GL
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGL 268
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C+ + A+ +F E G+ P+V T+S+L+ LC G +A L M + + P+V
Sbjct: 269 CKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNV 328
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V F+ LI + D M+++ P++ +Y ++ G R EA + E
Sbjct: 329 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
M+S+ P+ V++ L+ G C+ +R EE R+M ++G V
Sbjct: 389 MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D AV+ M + +PS FN +L+ + +++ + E L + D +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I I C++ +LS A+ V + K G EP++ T S+L++G C + +A +++M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD F LI ++D MV++G P++ +Y V+ GL A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L +++ M V + ++ GLC+++ ++ +M +G P + + +++C
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 375 AVSKPR 380
+ R
Sbjct: 303 LCNYGR 308
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 114/249 (45%), Gaps = 1/249 (0%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H ++RI AV + M + P TF +++ L + A + + +
Sbjct: 158 SLLNGYCH-SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
+ D ++ GLC++G++ A+ + + K +E +V ++T++ GLC+ +++
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDD 276
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLY 303
A +M+ G+ PDV ++ LI +L M+ + PNV ++ ++
Sbjct: 277 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 336
Query: 304 GLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ + +EA ++ + M+ R P ++ L+ G C H R +E M+ + P
Sbjct: 337 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 396
Query: 364 RMGMWRHIV 372
+ + ++
Sbjct: 397 NVVTYSTLI 405
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 2/284 (0%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RIDKAVETLLSMPDF 149
L++ +A N + + +L Q ++ S D + I + R ++ A+ L M
Sbjct: 89 LLSAVAKMNKFELVISLGEQ-MQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL 147
Query: 150 QCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
P T + +LN ++ A + + + + D LI GL + S A
Sbjct: 148 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
V + D+ + G +P++ T+ T+++GLC++G ++ A L+KMEK + DVV++N +I
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ M KG P+V +Y ++ L + R+ +A ++ M+ R P+
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V+F L+ + + E + +M+++ P + + ++N
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 116/286 (40%), Gaps = 36/286 (12%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +LI + R D A L M + + P+ TF+ +++ V A ++Y+
Sbjct: 296 YSSLISCLCNYGRWSD-ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ +++ D + LI G C L A +F+ PNV T+STL+ G C+ V
Sbjct: 355 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRV 414
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EE E +M + G+ + V + LI V MV G +PN+ +Y +
Sbjct: 415 EEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 302 LYGLLDAKRFIEALEV-------------------VEGMVS----------------RGF 326
L GL + +A+ V +EGM +G
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
P+ +++ ++ G CR EE D L++M G +P G + ++
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDK 138
KD P ++LI A ++ L + +R + +T + AR D
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A M P+ T+N +L+ L N A V+E R +E D NI+I+
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
G+C+ G++ ++F G+ PNV ++T++ G C KG EEA L+KM++ G P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 259 DVVVFNVLI 267
+ +N LI
Sbjct: 572 NSGTYNTLI 580
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 137/285 (48%), Gaps = 1/285 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
TSLI LD + ++ + ++ +T + VARRID+A++ + M D
Sbjct: 257 TSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
+C+P+ RT+ ++ L + A + + ++ + +LI LC Q +
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A ++ + + GL PNV T++ L++G C++GM+E+A + +E ME + P+ +N LI
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELI- 435
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
VL+ M+ + P+V +Y ++ G + F A ++ M RG VP
Sbjct: 436 KGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++ ++ LC+ +R EE + ++G P + M+ +++
Sbjct: 496 DQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 172/413 (41%), Gaps = 33/413 (7%)
Query: 10 RARTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQAT------TLCNSLN 63
+R L P +++ +C + N + +L + ++ L P T C S N
Sbjct: 420 ESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGN 477
Query: 64 HPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDD--F 121
SA LL L R P + TS+I L + ++ L +L+++ + +
Sbjct: 478 F-DSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACDLF-DSLEQKGVNPNVVM 534
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ LI Y A ++D+A L M C P+ TFN +++ L A+ A + E
Sbjct: 535 YTALIDGYCK-AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
++ ++ ILI L + G+ A F + SG +P+ T++T + C +G +
Sbjct: 594 VKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRL 653
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+A + + KM + GV PD+ ++ LI VL M G P+ ++ +
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL 713
Query: 302 LYGLLDAK------------------RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
+ LL+ K F +E++E MV P+ S+++L++G+C
Sbjct: 714 IKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEV 773
Query: 344 RRTEEVDWALRQMVR-QGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEG 395
+ M R +G P ++ +++C ++ E+ V D I G
Sbjct: 774 GNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVG 826
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 3/276 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMP 147
T LI L + LL Q L++ + + LI Y I+ AV+ + M
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGM-IEDAVDVVELME 420
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
+ P+ RT+N ++ + ++ G + + R V D N LI G C+ G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLER-KVLPDVVTYNSLIDGQCRSGNFD 479
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
+A ++ GL P+ T+++++ LC+ VEEA + + +E+ GV P+VV++ LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+L+ M+ K PN ++ +++GL + EA + E MV G
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P+ + L+ L + + +QM+ G P
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 1/203 (0%)
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
C N L+ L + G + +V+ E + + PN+ T++ +++G C+ G VEEA +++ K+
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
+ G+ PD + LI V + M KG N +Y +++GL A+R
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
EA+++ M P+ ++ L+ LC R E +++M G P + + +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 372 VNCAVSKPRNYESTCVSLDEILE 394
++ S+ + +E L ++LE
Sbjct: 365 IDSLCSQCK-FEKARELLGQMLE 386
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 110/254 (43%), Gaps = 25/254 (9%)
Query: 112 LKRRSFSDDFFF--TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANR 169
++ S D F +LIK Y + + + A + L M D C PS+ TF ++ L+ +
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQ-TNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 170 LYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFS 229
G+ + P L C M+ ++ E V++ ++ + + PN +++
Sbjct: 722 Y----GKQKGSEPEL------CAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYE 764
Query: 230 TLMHGLCEKG---MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
L+ G+CE G + E+ F+ +++ E G+ P +VFN L+ V+D M
Sbjct: 765 KLILGICEVGNLRVAEKVFDHMQRNE--GISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
+ G P + S + ++ GL V + ++ G+ +++K ++ G+ +
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 347 EEVDWALRQMVRQG 360
E M + G
Sbjct: 883 EAFYELFNVMEKNG 896
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 7/237 (2%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
ID+ VET FQ P+ T+ VLNV+ + +A E+ +++DA +I
Sbjct: 216 IDRMVET-----GFQ--PNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I GLC+ G L A +F+E G + ++ T++TL+ G C G ++ + L M K
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+VV F+VLI +L M+++G PN +Y ++ G R EA+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
++V+ M+S+G P ++F L+ G C+ R ++ R+M +G + + +V
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 123/264 (46%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R++ A T+ + P FN +LN L A E+ + + + +
Sbjct: 137 RKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITL 196
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N L+ GLC G++S AV + D ++G +PN T+ +++ +C+ G A E L KME+
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE 256
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ D V ++++I + + M KGF ++ +Y ++ G +A R+ +
Sbjct: 257 RNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDD 316
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+++ M+ R P+ V+F L+ + + E D L++M+++G P + +++
Sbjct: 317 GAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLID 376
Query: 374 CAVSKPRNYESTCVSLDEILEGCN 397
+ R E+ + I +GC+
Sbjct: 377 GFCKENRLEEAIQMVDLMISKGCD 400
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 7/266 (2%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPD 148
+I L LD L ++ ++ + F D + TLI + + A R D + L M
Sbjct: 269 IIDGLCKDGSLDNAFNLFNE-MEIKGFKADIITYNTLIGGFCN-AGRWDDGAKLLRDMIK 326
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
+ P+ TF+ +++ V A ++ + + + + N LI G C++ L
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+++ D G +P++ TF+ L++G C+ +++ E +M GV + V +N L+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+ MV + P++ SY+ +L GL D +ALE+ G + + +
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF-GKIEKSKME 505
Query: 329 SFVSFKQLVV-GLCRHRRTEEVDWAL 353
+ +++ G+C + ++ W L
Sbjct: 506 LDIGIYMIIIHGMCNASKVDDA-WDL 530
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 99/230 (43%), Gaps = 37/230 (16%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCM 193
R+++A++ + M C P TFN ++N ANR+ D E++ V +
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD-GLELFREMSLRGVIANTVTY 441
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N L++G CQ G+L A K+F E + P++ ++ L+ GLC+ G +E+A E K+EK
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ D+ G Y +++G+ +A + +
Sbjct: 502 SKMELDI-----------------------------------GIYMIIIHGMCNASKVDD 526
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
A ++ + +G ++ ++ LCR + D R+M +G P
Sbjct: 527 AWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 93/233 (39%), Gaps = 41/233 (17%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F LI Y A RID +E M + T+N ++ + +VA ++++
Sbjct: 406 FNILINGYCK-ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
V D IL+ GLC GEL A+++F + KS +E ++ + ++HG+C V
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 242 EEAFEWL-----------------------------------EKMEKCGVCPDVVVFNVL 266
++A++ KM + G PD + +N+L
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL----YGLLDAKRFIEAL 315
I +++ M GF +V + + V+ G LD K F++ L
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD-KSFLDML 636
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 73/165 (44%)
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
AV +F + +S P V F+ L + + E ++ME G+ + +++I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+ +++ G+ P+ + +L GL R EALE+V+ MV G P
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ ++ LV GLC + + + + +MV GF P + ++N
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ LC+Q E G+ ++ T S +++ C + AF + K+ K G
Sbjct: 106 LVLALCKQME------------SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLG 153
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD V+FN L+ ++D MV G P + + ++ GL + +A+
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+++ MV GF P+ V++ ++ +C+ +T LR+M
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 133/285 (46%), Gaps = 10/285 (3%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSF--SDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
+I KLA +D + LL Q +K + F S+D F ++I +Y V ++AVE + +
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQ-MKLQGFHCSEDLFISVISVYRQVGLA-ERAVEMFYRIKE 139
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
F C PS + +N VL+ L+ + VY R E + N+L+K LC+ ++
Sbjct: 140 FGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDG 199
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A K+ E G P+ +++T++ +CE G+V+E E E+ E P V V+N LI
Sbjct: 200 AKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALIN 254
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
++ MV KG PNV SY ++ L ++ + A + M+ RG P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ-GFVPRMGMWRHIV 372
+ + LV G T + QM+R G P + + +V
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 359
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFN-FVLNVLVANRLYDVAGEVYEA 180
+ TLI + + + +I+ A L M C P+ T + V + +D +
Sbjct: 284 YSTLINVLCN-SGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++ + N L++G C G + AV VF + G PN+RT+ +L++G ++G
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++ A KM G CP+VVV+ ++ ++++M ++ P+V ++
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNA 462
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFV-PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
+ GL DA R A +V M + P+ V++ +L+ GL + R EE R++ +
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 360 G 360
G
Sbjct: 523 G 523
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 1/226 (0%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A E + M + P+ +++ ++NVL + ++A + + ++ L+K
Sbjct: 265 AFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVK 324
Query: 199 GLCQQGELSAAVKVFDEFPKS-GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G +G A+ ++++ + GL+PNV ++TL+ G C G + +A ME+ G
Sbjct: 325 GCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCS 384
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P++ + LI + + M+ G PNV Y ++ L +F EA +
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+E M PS +F + GLC R + + RQM +Q P
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 112/284 (39%), Gaps = 48/284 (16%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
I KAV M + C P+ RT+ ++N D G VY L CC N+
Sbjct: 368 IVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD--GAVYIWNKMLT---SGCCPNV 422
Query: 196 -----LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
+++ LC+ + A + + K P+V TF+ + GLC+ G ++ A + +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 251 MEKCGVCP-DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
ME+ CP ++V +N L+ + + +G + +Y +L+G +A
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 310 RFIEALEVVEGMVSRG-------------------------------------FVPSFVS 332
AL++V M+ G + P +S
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
+ ++ GLCR E+ L +M+ G VP + W ++NC +
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 5/172 (2%)
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
Q G AV++F + G +P+V+ ++ ++ L + ++ + M++ G P+V
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM 321
+NVL+ +L M KG P+ SY V+ + + E E+ E
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAER- 241
Query: 322 VSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
F P + L+ GLC+ + +R+MV +G P + + ++N
Sbjct: 242 ----FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLIN 289
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++I+ L G++ + + + G + F +++ + G+ E A E ++++
Sbjct: 81 VMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF 140
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G P V ++N ++ V M R GF PNV +Y +L L + A
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGA 200
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+++ M ++G P VS+ ++ +C +E R++ + F P + ++ ++N
Sbjct: 201 KKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG----RELAER-FEPVVSVYNALIN- 254
Query: 375 AVSKPRNYESTCVSLDEILE 394
+ K +Y+ + E++E
Sbjct: 255 GLCKEHDYKGAFELMREMVE 274
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 2/243 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY-DVAGEVYEA 180
F LI YA + +KAVE+ M +F C P T+N +L V++ ++ +A VY
Sbjct: 130 FCVLISAYAKMGM-AEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + IL+ GL ++G S A K+FD+ G+ PN T++ L+ GLC++G
Sbjct: 189 MLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++A + +M+ G PD V N L+ +L + + GF + Y
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ GL A+R+ +A E+ M+ + P + + L+ GL + + E+ L M +G
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 361 FVP 363
P
Sbjct: 369 ISP 371
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 14/270 (5%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
+SLI L A L LK+ D +T++ A +I+ A++ L SMP
Sbjct: 307 SSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS 366
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P +N V+ L L + + DAC ILI +C+ G +
Sbjct: 367 KGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRE 426
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV------ 262
A ++F E KSG P+V TF+ L+ GLC+ G ++EA L KME G + +
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME-VGRPASLFLRLSHSG 485
Query: 263 ---FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
F+ ++ D G P++ SY ++ G A AL+++
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFAD----TGSSPDIVSYNVLINGFCRAGDIDGALKLLN 541
Query: 320 GMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
+ +G P V++ L+ GL R R EE
Sbjct: 542 VLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 99/264 (37%), Gaps = 37/264 (14%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK------ 211
F V+++L + D+ + E V VD+ C +LI + G AV+
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 212 ------------------------------VFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
V++E K PN+ TF LM GL +KG
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+A + + M G+ P+ V + +LI + M G YP+ ++ +
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNAL 274
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
L G R +EA E++ GFV + L+ GL R RR + M+++
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 362 VPRMGMWRHIVNCAVSKPRNYEST 385
P + ++ ++ +SK E
Sbjct: 335 KPDIILYTILIQ-GLSKAGKIEDA 357
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 7/261 (2%)
Query: 114 RRSFSDDFFFTLIKLYAHVARRID--KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY 171
RR SD LI++Y +R A++ + + +PS+ T N +L LV +
Sbjct: 187 RRKMSD----LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEF 242
Query: 172 DVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTL 231
E ++ + V D I C+ G++ AVK+F + ++G+ PNV TF+T+
Sbjct: 243 QKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTV 301
Query: 232 MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+ GL G +EAF + EKM + G+ P ++ +++L+ VL M +KGF
Sbjct: 302 IDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF 361
Query: 292 YPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDW 351
PNV Y ++ ++A +A+E+ + MVS+G + ++ L+ G C++ + + +
Sbjct: 362 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 421
Query: 352 ALRQMVRQGFVPRMGMWRHIV 372
L++M+ GF G + ++
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVI 442
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 2/296 (0%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLD-PIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
+K F P +LI A L+ I K S + + TLIK Y +
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-A 416
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A L M ++ +F V+ +L ++ ++D A + + L
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I GLC+ G+ S A++++ +F G + RT + L+HGLCE G ++EAF +++ G
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
D V +N LI LD MV++G P+ +Y ++ GL + + EA++
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ G +P ++ ++ G C+ RTEE +M+ + P ++ H++
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 2/294 (0%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR-SFSDDFFFTLIKLYAHVARRIDKA 139
FN + TS+I L + D + + L R S TLI + KA
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH-SKA 489
Query: 140 VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKG 199
+E + RT N +L+ L D A + + +D N LI G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
C + +L A DE K GL+P+ T+S L+ GL VEEA ++ + ++ G+ PD
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 260 VVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
V ++V+I D M+ K PN Y ++ + R ALE+ E
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 320 GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
M +G P+ ++ L+ G+ R EE +M +G P + + +++
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 113/286 (39%), Gaps = 1/286 (0%)
Query: 77 ARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
A K P++ C L+T L AN K S F T I + ++
Sbjct: 218 ANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCK-GGKV 276
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
++AV+ M + P+ TFN V++ L YD A E +E +IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+KGL + + A V E K G PNV ++ L+ E G + +A E + M G+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
+N LI +L M+ GF N GS+ V+ L F AL
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
V M+ R P L+ GLC+H + + Q + +GFV
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 124/315 (39%), Gaps = 4/315 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
+L+ L A LD + + L R D + + +++D+A L M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P T++ ++ L + A + ++ R + D +++I G C+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
+ FDE ++PN ++ L+ C G + A E E M+ G+ P+ + LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+ + M +G PNV Y ++ G + ++ ++ M S+ P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
+ +++ ++ G R E L +M +G VP ++ + + + E+ S
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
Query: 389 LDE----ILEGCNHL 399
+E I+EG N L
Sbjct: 809 DEENYAAIIEGWNKL 823
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 130/261 (49%), Gaps = 7/261 (2%)
Query: 114 RRSFSDDFFFTLIKLYAHVARRID--KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY 171
RR SD LI++Y +R A++ + + +PS+ T N +L LV +
Sbjct: 187 RRKMSD----LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEF 242
Query: 172 DVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTL 231
E ++ + V D I C+ G++ AVK+F + ++G+ PNV TF+T+
Sbjct: 243 QKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTV 301
Query: 232 MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+ GL G +EAF + EKM + G+ P ++ +++L+ VL M +KGF
Sbjct: 302 IDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGF 361
Query: 292 YPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDW 351
PNV Y ++ ++A +A+E+ + MVS+G + ++ L+ G C++ + + +
Sbjct: 362 PPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAER 421
Query: 352 ALRQMVRQGFVPRMGMWRHIV 372
L++M+ GF G + ++
Sbjct: 422 LLKEMLSIGFNVNQGSFTSVI 442
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 131/296 (44%), Gaps = 2/296 (0%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLD-PIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
+K F P +LI A L+ I K S + + TLIK Y +
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQ-A 416
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A L M ++ +F V+ +L ++ ++D A + + L
Sbjct: 417 DNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTL 476
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I GLC+ G+ S A++++ +F G + RT + L+HGLCE G ++EAF +++ G
Sbjct: 477 ISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGC 536
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
D V +N LI LD MV++G P+ +Y ++ GL + + EA++
Sbjct: 537 VMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQ 596
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ G +P ++ ++ G C+ RTEE +M+ + P ++ H++
Sbjct: 597 FWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 120/294 (40%), Gaps = 2/294 (0%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR-SFSDDFFFTLIKLYAHVARRIDKA 139
FN + TS+I L + D + + L R S TLI + KA
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH-SKA 489
Query: 140 VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKG 199
+E + RT N +L+ L D A + + +D N LI G
Sbjct: 490 LELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
C + +L A DE K GL+P+ T+S L+ GL VEEA ++ + ++ G+ PD
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
Query: 260 VVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
V ++V+I D M+ K PN Y ++ + R ALE+ E
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Query: 320 GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
M +G P+ ++ L+ G+ R EE +M +G P + + +++
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 113/286 (39%), Gaps = 1/286 (0%)
Query: 77 ARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
A K P++ C L+T L AN K S F T I + ++
Sbjct: 218 ANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCK-GGKV 276
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
++AV+ M + P+ TFN V++ L YD A E +E +IL
Sbjct: 277 EEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+KGL + + A V E K G PNV ++ L+ E G + +A E + M G+
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGL 396
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
+N LI +L M+ GF N GS+ V+ L F AL
Sbjct: 397 SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALR 456
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
V M+ R P L+ GLC+H + + Q + +GFV
Sbjct: 457 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFV 502
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 124/315 (39%), Gaps = 4/315 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
+L+ L A LD + + L R D + + +++D+A L M
Sbjct: 509 NALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVK 568
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P T++ ++ L + A + ++ R + D +++I G C+
Sbjct: 569 RGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEE 628
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
+ FDE ++PN ++ L+ C G + A E E M+ G+ P+ + LI
Sbjct: 629 GQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+ + M +G PNV Y ++ G + ++ ++ M S+ P
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHP 748
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
+ +++ ++ G R E L +M +G VP ++ + + + E+ S
Sbjct: 749 NKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGS 808
Query: 389 LDE----ILEGCNHL 399
+E I+EG N L
Sbjct: 809 DEENYAAIIEGWNKL 823
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
+ P+ +SL+ H + L+ Q ++ D FT + + + +AV
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ M C P+ T+ V+N L D+A + +E D N +I L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSL 270
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C+ + A+ +F E G+ PNV T+S+L+ LC G +A + L M + + P++
Sbjct: 271 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 330
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V FN LI + D M+++ P++ +Y ++ G R +A ++ E
Sbjct: 331 VTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEF 390
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
MVS+ P V++ L+ G C+ +R E+ R+M +G V
Sbjct: 391 MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 115/246 (46%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D A+ M + PS FN +L+ + + +DV + E RL + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C++ ++S A+ + + K G EP++ T S+L++G C + +A +++M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD + F LI ++D MV++G PN+ +Y V+ GL A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L ++ M + V F ++ LC++R ++ ++M +G P + + +++C
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 375 AVSKPR 380
S R
Sbjct: 305 LCSYGR 310
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H +RI AV + M + P TF +++ L L++ A E R
Sbjct: 160 SLLNGYCH-GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDR 215
Query: 184 L---AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + + +++ GLC++G+ A+ + ++ + +E +V F+T++ LC+
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 275
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V++A ++ME G+ P+VV ++ LI +L M+ K PN+ ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + +F+EA ++ + M+ R P ++ LV G C H R ++ MV +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 361 FVPRMGMWRHIVNCAVSKPRNYEST 385
P + + ++ R + T
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGT 420
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 113/273 (41%), Gaps = 35/273 (12%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R A + L M + + P+ TFN +++ V + A ++Y+ + +++ D N
Sbjct: 310 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
L+ G C L A ++F+ P+V T++TL+ G C+ VE+ E +M
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ D V + LI V MV G P++ +Y +L GL + + +A
Sbjct: 430 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 489
Query: 315 LEV-------------------VEGMVSRGFV----------------PSFVSFKQLVVG 339
LEV +EGM G V P+ V++ ++ G
Sbjct: 490 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 549
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
LC R +E L++M G +P G + ++
Sbjct: 550 LCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 104/239 (43%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+I A+ L M PS T + +LN + A + + + D
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI GL + S AV + D + G +PN+ T+ +++GLC++G + A L KME
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA 254
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ DVV+FN +I + M KG PNV +Y ++ L R+ +A
Sbjct: 255 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 314
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+++ M+ + P+ V+F L+ + + E + M+++ P + + +VN
Sbjct: 315 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 2/251 (0%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRI 136
++ +P SL+ + LD + + + F D + TLIK + ++R+
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK-SKRV 416
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
+ E M T+ ++ L + D A +V++ V D +IL
Sbjct: 417 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 476
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ GLC G+L A++VFD KS ++ ++ ++T++ G+C+ G V++ ++ + GV
Sbjct: 477 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 536
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
P+VV +N +I +L M G PN G+Y ++ L + E
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 317 VVEGMVSRGFV 327
++ M S FV
Sbjct: 597 LIREMRSCRFV 607
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 161/380 (42%), Gaps = 12/380 (3%)
Query: 16 PPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQATTLCNSL-NHPSSAVTLLH- 73
PP +L + T +D L + W TP ++ L NH A+ H
Sbjct: 21 PPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPW-TPNLVNSVLKRLWNHGPKALQFFHF 79
Query: 74 LYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVA 133
L +++ I A +L + +L+H+ R F ++ A
Sbjct: 80 LDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASA 139
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+ DKAV+ L+M + C+ +FN +L+VL ++ + A E++ A R VD
Sbjct: 140 GKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL-RGRFSVDTVTY 198
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N+++ G C A++V E + G+ PN+ T++T++ G G + A+E+ +M+K
Sbjct: 199 NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKK 258
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
DVV + ++ V D M+R+G P+V +Y ++ L
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A+ + E MV RG+ P+ ++ L+ GL + +++M +G P + ++
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMI- 377
Query: 374 CAVSKPRNYESTCVSLDEIL 393
Y S C +++ L
Sbjct: 378 -------RYYSECSEVEKAL 390
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+R KA+E L M + P+ T+N +L A E + + E+D
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
++ G GE+ A VFDE + G+ P+V T++ ++ LC+K VE A E+M +
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G P+V +NVLI ++ M +G PN +Y ++ + +
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
AL + E M S +P+ ++ L+ G+ +R+E++ A Q
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQ 430
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 145/331 (43%), Gaps = 20/331 (6%)
Query: 36 RDTAILARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTA--RKDFNPTEPFCTSLIT 93
RDT +L F + C S N+ S LHL RK +NP CT LI
Sbjct: 88 RDTQMLKIFHRS-----------CRSGNYIES----LHLLETMVRKGYNPDVILCTKLIK 132
Query: 94 KLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCW 152
+ P + + L++ D F + LI + + RID A L M
Sbjct: 133 GFFTLRNI-PKAVRVMEILEKFGQPDVFAYNALINGFCKM-NRIDDATRVLDRMRSKDFS 190
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P T+N ++ L + D+A +V + ILI+ +G + A+K+
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
DE GL+P++ T++T++ G+C++GMV+ AFE + +E G PDV+ +N+L+
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
++ M + PNV +Y ++ L + EA+ +++ M +G P S
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ L+ CR R + L M+ G +P
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLP 401
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 5/248 (2%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR--RIDKAVETLLSMPD 148
LIT L ++ LL + +K + + D + + L A R R+D A+E L +M
Sbjct: 339 LITTLCRDGKIEEAMNLL-KLMKEKGLTPDAY-SYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
C P +N VL L N D A E++ + ++ N + L G+
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+ + E +G++P+ T+++++ LC +GMV+EAFE L M C P VV +N+++
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
VL+ MV G PN +Y ++ G+ A EA+E+ +V +
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAIS 576
Query: 329 SFVSFKQL 336
+ SFK+L
Sbjct: 577 EY-SFKRL 583
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 151/376 (40%), Gaps = 11/376 (2%)
Query: 28 FCTQPNTDRDTAILARFQQKDWLTPKQAT------TLCNSLNHPSSAVTLLHLYTARKDF 81
FC D T +L R + KD+ +P T +LC+ + L L + +
Sbjct: 168 FCKMNRIDDATRVLDRMRSKDF-SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS--DNC 224
Query: 82 NPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVE 141
PT T LI +D L+ + L R D F + I +D+A E
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
+ ++ C P ++N +L L+ ++ ++ + + +ILI LC
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
+ G++ A+ + + GL P+ ++ L+ C +G ++ A E+LE M G PD+V
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM 321
+N ++ + + G PN SY + L + I AL ++ M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 322 VSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRN 381
+S G P +++ ++ LCR +E L M F P + + +IV K
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY-NIVLLGFCKAHR 523
Query: 382 YESTCVSLDEIL-EGC 396
E L+ ++ GC
Sbjct: 524 IEDAINVLESMVGNGC 539
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 129/278 (46%), Gaps = 6/278 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RIDKAVETLLSMP 147
+LI N +D +L + ++ + FS D I + + +R ++D A++ L +
Sbjct: 162 NALINGFCKMNRIDDATRVLDR-MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
C P+ T+ ++ + D A ++ + ++ D N +I+G+C++G +
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM--EKCGVCPDVVVFNV 265
A ++ G EP+V +++ L+ L +G EE + + KM EKC P+VV +++
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSI 338
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
LI +L +M KG P+ SY ++ R A+E +E M+S G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+P V++ ++ LC++ + ++ ++ G P
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSP 436
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 80/184 (43%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N LI G C+ + A +V D P+ T++ ++ LC +G ++ A + L
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++ P V+ + +LI ++D M+ +G P++ +Y ++ G+
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
A E+V + +G P +S+ L+ L + EE + + +M + P + +
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 369 RHIV 372
++
Sbjct: 337 SILI 340
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C+ G ++ + + + G P+V + L+ G + +A +E +EK G PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
+N LI VLD M K F P+ +Y ++ L + AL+V+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
++S P+ +++ L+ +E + +M+ +G P M + I+
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%), Gaps = 4/284 (1%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLI-KLYAHVARRIDK 138
+ P SL+ H N + +L+ Q ++ D F F TLI L+ H R +
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRH--NRASE 204
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
AV + M C P T+ V+N L D+A + + + +E N +I
Sbjct: 205 AVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIID 264
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
LC ++ A+ +F E G+ PNV T+++L+ LC G +A L M + + P
Sbjct: 265 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 324
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+VV F+ LI + D M+++ P++ +Y ++ G R EA +
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
E M+S+ P+ V++ L+ G C+ +R +E R+M ++G V
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 131/287 (45%), Gaps = 4/287 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RIDKAVETLLSMP 147
+ L++ +A N D + +L Q ++ S + + I + R ++ A+ L M
Sbjct: 85 SKLLSAIAKMNKFDLVISLGEQ-MQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 148 DFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
P T N +LN NR+ D V + + + D+ N LI GL +
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV-EMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
S AV + D G +P++ T+ +++GLC++G ++ A L+KME+ + P VV++N +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I + M KG PNV +Y ++ L + R+ +A ++ M+ R
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
P+ V+F L+ + + E + +M+++ P + + ++N
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 7/252 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ + H RI AV + M + P TFN +++ L ++ A E R
Sbjct: 156 SLLNGFCH-GNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR---HNRASEAVALVDR 211
Query: 184 LAV---EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ V + D I++ GLC++G++ A+ + + + +EP V ++T++ LC
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN 271
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V +A +M+ G+ P+VV +N LI +L M+ + PNV ++
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + + +EA ++ + M+ R P ++ L+ G C H R +E M+ +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 361 FVPRMGMWRHIV 372
P + + ++
Sbjct: 392 CFPNVVTYNTLI 403
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 110/246 (44%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D AV M + +PS F+ +L+ + +D+ + E L + + +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C++ +LS A+ V + K G EP++ T ++L++G C + +A + +M +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD FN LI ++D MV KG P++ +Y V+ GL A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L +++ M P V + ++ LC ++ + +M +G P + + ++ C
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 375 AVSKPR 380
+ R
Sbjct: 301 LCNYGR 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 153/362 (42%), Gaps = 7/362 (1%)
Query: 16 PPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQA--TTLCNSLNHPSSAVTLLH 73
P L + C + + D ++L + +Q + P T+ ++L + + L+
Sbjct: 219 PDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 74 LYTA--RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYA 130
L+T K P SLI L + LL ++R+ + F+ LI +
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
+ ++ A + M P T++ ++N + D A ++E +
Sbjct: 338 KEGKLVE-AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
N LIKG C+ + +++F E + GL N T++TL+HG + + A ++
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M GV PD++ +++L+ V + + R P++ +Y ++ G+ A +
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
+ ++ + +G P+ V++ ++ G CR EE D R+M +G +P G +
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 371 IV 372
++
Sbjct: 577 LI 578
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 6/331 (1%)
Query: 46 QKDWLTPKQATTLCNSLNHPSSAVT----LLHLYTARKDFNPTEPFCTSLITKLAHANLL 101
QKD+L + + N S ++ +LH T + F E ++ +L
Sbjct: 92 QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVN-GGVDLP 150
Query: 102 DPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFV 161
+ L + + + F +L K +AH+ ++ A +T + M D+ P+ + N
Sbjct: 151 AKVFDALLYSYRECDSTPRVFDSLFKTFAHL-KKFRNATDTFMQMKDYGFLPTVESCNAY 209
Query: 162 LNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
++ L+ D+A Y R + + +N+++ G C+ G+L +++ + + G
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
+++TL+ G CEKG++ A + M K G+ P+VV FN LI
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
V M PN +Y ++ G A E MV G +++ L+ GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ +T + ++++ ++ VP + ++
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D A+ M + P+ T N V++ + D E+ + RL N
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C++G LS+A+K+ + KSGL+PNV TF+TL+HG C ++EA + +M+
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
V P+ V +N LI + MV G ++ +Y +++GL + +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ V+ + VP+ +F L++G C + + + M+R G P + +V+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS- 456
Query: 375 AVSKPRNYESTCVSLDEIL 393
A + +++ L E++
Sbjct: 457 AFCRNEDFDGASQVLREMV 475
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 1/184 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F TLI + A ++ +A + M P+ T+N ++N +++A YE
Sbjct: 311 FNTLIHGFCR-AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
++ D N LI GLC+Q + A + E K L PN TFS L+ G C +
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ FE + M + G P+ FN+L+ VL MVR+ + + QV
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 302 LYGL 305
GL
Sbjct: 490 CNGL 493
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 97/210 (46%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ TFN +++ A +V+ + V + N LI G QQG+ A +
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+++ +G++ ++ T++ L+ GLC++ +A +++++++K + P+ F+ LI
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ M+R G +PN ++ ++ + F A +V+ MV R +
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
Q+ GL + + V L++M + F+
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 2/215 (0%)
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDAC--CMNILIKGLCQQGELSAAVKVFDEFPK 218
+L ++ N D+ +V++A E D+ + L K + A F +
Sbjct: 137 ILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKD 196
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
G P V + + M L +G V+ A + +M +C + P+ N+++
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+L M R GF SY ++ G + AL++ M G P+ V+F L+
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
G CR + +E +M P + ++N
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 6/331 (1%)
Query: 46 QKDWLTPKQATTLCNSLNHPSSAVT----LLHLYTARKDFNPTEPFCTSLITKLAHANLL 101
QKD+L + + N S ++ +LH T + F E ++ +L
Sbjct: 92 QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVN-GGVDLP 150
Query: 102 DPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFV 161
+ L + + + F +L K +AH+ ++ A +T + M D+ P+ + N
Sbjct: 151 AKVFDALLYSYRECDSTPRVFDSLFKTFAHL-KKFRNATDTFMQMKDYGFLPTVESCNAY 209
Query: 162 LNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
++ L+ D+A Y R + + +N+++ G C+ G+L +++ + + G
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
+++TL+ G CEKG++ A + M K G+ P+VV FN LI
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
V M PN +Y ++ G A E MV G +++ L+ GLC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ +T + ++++ ++ VP + ++
Sbjct: 390 KQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 1/259 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D A+ M + P+ T N V++ + D E+ + RL N
Sbjct: 218 RVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYN 277
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C++G LS+A+K+ + KSGL+PNV TF+TL+HG C ++EA + +M+
Sbjct: 278 TLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAV 337
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
V P+ V +N LI + MV G ++ +Y +++GL + +A
Sbjct: 338 NVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKA 397
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ V+ + VP+ +F L++G C + + + M+R G P + +V+
Sbjct: 398 AQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVS- 456
Query: 375 AVSKPRNYESTCVSLDEIL 393
A + +++ L E++
Sbjct: 457 AFCRNEDFDGASQVLREMV 475
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 1/184 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F TLI + A ++ +A + M P+ T+N ++N +++A YE
Sbjct: 311 FNTLIHGFCR-AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDM 369
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
++ D N LI GLC+Q + A + E K L PN TFS L+ G C +
Sbjct: 370 VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ FE + M + G P+ FN+L+ VL MVR+ + + QV
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQV 489
Query: 302 LYGL 305
GL
Sbjct: 490 CNGL 493
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 97/210 (46%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ TFN +++ A +V+ + V + N LI G QQG+ A +
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+++ +G++ ++ T++ L+ GLC++ +A +++++++K + P+ F+ LI
Sbjct: 366 YEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCV 425
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ M+R G +PN ++ ++ + F A +V+ MV R +
Sbjct: 426 RKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRT 485
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
Q+ GL + + V L++M + F+
Sbjct: 486 VHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 84/215 (39%), Gaps = 2/215 (0%)
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDAC--CMNILIKGLCQQGELSAAVKVFDEFPK 218
+L ++ N D+ +V++A E D+ + L K + A F +
Sbjct: 137 ILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKD 196
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
G P V + + M L +G V+ A + +M +C + P+ N+++
Sbjct: 197 YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDK 256
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+L M R GF SY ++ G + AL++ M G P+ V+F L+
Sbjct: 257 GIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIH 316
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
G CR + +E +M P + ++N
Sbjct: 317 GFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 135/310 (43%), Gaps = 6/310 (1%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLI--KLYAHVARRIDK 138
+ P+ SL+ H N + L+ Q ++ D FT + L+ H + +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH--NKASE 198
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
AV + M C P T+ V+N L D+A + + +E D N +I
Sbjct: 199 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
GLC+ + A +F++ G++P+V T++ L+ LC G +A L M + + P
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVR-KGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
D+V FN LI + D MV+ K +P+V +Y ++ G KR E +EV
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEV 378
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVS 377
M RG V + V++ L+ G + R + +QMV G P + M +I+ +
Sbjct: 379 FREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDI-MTYNILLDGLC 437
Query: 378 KPRNYESTCV 387
N E+ V
Sbjct: 438 NNGNVETALV 447
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 111/246 (45%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D A+ M + +PS F+ +L+ + +D+ + E L + + +
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I I C++ +LS A+ + + K G P++ T ++L++G C + EA +++M +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD V F L+ +++ MV KG P++ +Y V+ GL A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L ++ M V + ++ GLC+++ ++ +M +G P + + +++C
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 375 AVSKPR 380
+ R
Sbjct: 295 LCNYGR 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 38/311 (12%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
+ L++ +A N D + +L Q + + +++ Y ++ A+ L M
Sbjct: 79 SKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMK 138
Query: 149 FQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
PS T N +LN NR+ + V + + + D L+ GL Q + S
Sbjct: 139 LGYGPSIVTLNSLLNGFCHGNRISEAVALV-DQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
AV + + G +P++ T+ +++GLC++G + A L KMEK + DVV++N +I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL-----YG------------------ 304
+ + M KG P+V +Y ++ YG
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 305 --------LLDA----KRFIEALEVVEGMV-SRGFVPSFVSFKQLVVGLCRHRRTEEVDW 351
L+DA + +EA ++ + MV S+ P V++ L+ G C+++R EE
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 352 ALRQMVRQGFV 362
R+M ++G V
Sbjct: 378 VFREMSQRGLV 388
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 119/286 (41%), Gaps = 4/286 (1%)
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR--RIDKAVETLLSMPDFQCWPSRRTF 158
LD L +K R F F+ KL + +A+ + D + M + + T+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFS--KLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 113
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
+ +N +A + +L +N L+ G C +S AV + D+ +
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 173
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
G +P+ TF+TL+HGL + EA +E+M G PD+V + +I
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+L+ M + +V Y ++ GL K +A ++ M ++G P ++ L+
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
LC + R + L M+ + P + + +++ V + + E+
Sbjct: 294 CLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 13/245 (5%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-------ANRLYDVAGEVYEAAPRLAVE 187
R A L M + P FN +++ V A +LYD + P
Sbjct: 300 RWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP----- 354
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEW 247
D N LIKG C+ + ++VF E + GL N T++TL+HG + + A
Sbjct: 355 -DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 248 LEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD 307
++M GV PD++ +N+L+ V + M ++ ++ +Y ++ L
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGM 367
A + + ++ + +G P+ V++ ++ G CR EE D +M G +P G
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 368 WRHIV 372
+ ++
Sbjct: 534 YNTLI 538
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARR 135
K+ NP F +LI L L + +K + D + TLIK + +R
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY-KR 371
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+++ +E M + T+ +++ R D A V++ V D NI
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ GLC G + A+ VF+ K ++ ++ T++T++ LC+ G VE+ ++ + G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V P+VV + ++ + M G PN G+Y ++ L +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 316 EVVEGMVSRGFVPSFVSF 333
E+++ M S GF +F
Sbjct: 552 ELIKEMRSCGFAGDASTF 569
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 82/186 (44%), Gaps = 3/186 (1%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
AR D A M P T+N +L+ L N + A V+E + +++D
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+I+ LC+ G++ +F G++PNV T++T+M G C KG+ EEA +M+
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA---K 309
+ G P+ +N LI ++ M GF + ++ V L D K
Sbjct: 524 EDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDK 583
Query: 310 RFIEAL 315
F++ L
Sbjct: 584 SFLDML 589
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
+ P+ +SL+ H + L+ Q ++ D FT + + + +AV
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ M C P+ T+ V+N L D+A + +E D N +I L
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C+ + A+ +F E G+ PNV T+S+L+ LC G +A + L M + + P++
Sbjct: 196 CKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL 255
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V FN LI + D M+++ P++ +Y ++ G R +A ++ E
Sbjct: 256 VTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEF 315
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
MVS+ P ++ L+ G C+ +R E+ R+M +G V
Sbjct: 316 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS FN +L+ + + +D+ + E RL + + NILI C++ ++S A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ K G EP++ T S+L++G C + +A +++M + G PD + F LI
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
++D MV++G PN+ +Y V+ GL A ++ M + V
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
F ++ LC++R ++ ++M +G P + + +++C S R
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H +RI AV + M + P TF +++ L L++ A E R
Sbjct: 85 SLLNGYCH-GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDR 140
Query: 184 L---AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + + +++ GLC++G++ A + ++ + +E +V F+T++ LC+
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH 200
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V++A ++ME G+ P+VV ++ LI +L M+ K PN+ ++
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + +F+EA ++ + M+ R P ++ L+ G C H R ++ MV +
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKD 320
Query: 361 FVPRMGMWRHIVNCAVSKPRNYEST 385
P + + ++ R + T
Sbjct: 321 CFPDLDTYNTLIKGFCKSKRVEDGT 345
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%), Gaps = 2/284 (0%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RIDKAVETLLSMPDF 149
L++ +A D + +L + ++R S + + I + R +I A+ L M
Sbjct: 16 LLSAIAKMKKFDLVISL-GEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 74
Query: 150 QCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
PS T + +LN + A + + + D LI GL + S A
Sbjct: 75 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 134
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
V + D + G +PN+ T+ +++GLC++G ++ AF L KME + DVV+FN +I
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ M KG PNV +Y ++ L R+ +A +++ M+ + P+
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V+F L+ + + E + M+++ P + + ++N
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 113/273 (41%), Gaps = 35/273 (12%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R A + L M + + P+ TFN +++ V + A ++++ + +++ D N
Sbjct: 235 RWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYN 294
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C L A ++F+ P++ T++TL+ G C+ VE+ E +M
Sbjct: 295 SLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ D V + LI V MV G P++ +Y +L GL + + +A
Sbjct: 355 GLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 315 LEV-------------------VEGMVSRGFV----------------PSFVSFKQLVVG 339
LEV +EGM G V P+ V++ ++ G
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
LC R +E L++M G +P G + ++
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 72 LHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSD-DFFFTLIKLYA 130
LH ++ +P SLI + LD + + + F D D + TLIK +
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
++R++ E M T+ ++ L + D A +V++ V D
Sbjct: 337 K-SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
+IL+ GLC G+L A++VFD KS ++ ++ ++T++ G+C+ G V++ ++
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
+ GV P+VV +N +I +L M G P+ G+Y ++ L
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 311 FIEALEVVEGMVSRGFV 327
+ E++ M S FV
Sbjct: 516 KAASAELIREMRSCRFV 532
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 107/211 (50%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P + T+ +++ L + A ++ A ++ + N LIKGL QG + A ++
Sbjct: 354 PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+E + GL P V+TF+ L++GLC+ G V +A ++ M G PD+ FN+LI
Sbjct: 414 ANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYST 473
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+LD+M+ G P+V +Y +L GL +F + +E + MV +G P+ +
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
F L+ LCR+R+ +E L +M + P
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNP 564
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 3/316 (0%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLH 109
L PK T + P A+ + + F T S+I KL + + + +L
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLV 64
Query: 110 QTLKR--RSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA 167
+ + + +K Y + + +AV M + C P+ ++N +++VLV
Sbjct: 65 DMRENVGNHMLEGVYVGAMKNYGRKGK-VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 123
Query: 168 NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
+ +D A +VY + D I +K C+ AA+++ + G E NV
Sbjct: 124 SGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVA 183
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
+ T++ G E+ E +E KM GV + FN L+ +LD ++
Sbjct: 184 YCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVI 243
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
++G PN+ +Y + GL A+ +V ++ +G P +++ L+ GLC++ + +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 348 EVDWALRQMVRQGFVP 363
E + L +MV +G P
Sbjct: 304 EAEVYLGKMVNEGLEP 319
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 96/170 (56%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI GLC +GE + A+ +F+E G++PNV ++TL+ GL +GM+ EA + +M + G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+V FN+L+ ++ +M+ KG++P++ ++ +++G + AL
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
E+++ M+ G P ++ L+ GLC+ + E+V + MV +G P +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNL 531
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%), Gaps = 1/275 (0%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQ 150
L+ L + L+ + + F D F F ++ +++ A+E L M D
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
P T+N +LN L ++ E Y+ + NIL++ LC+ +L A+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEAL 551
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC-GVCPDVVVFNVLIXX 269
+ +E + P+ TF TL+ G C+ G ++ A+ KME+ V +N++I
Sbjct: 552 GLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ MV + P+ +Y+ ++ G + + M+ GF+PS
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
+ +++ LC R E + +MV++G VP
Sbjct: 672 LTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPE 706
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
TFN +L VL ++ + + V + N+ I+GLCQ+GEL AV++
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
+ G +P+V T++ L++GLC+ +EA +L KM G+ PD +N LI
Sbjct: 278 IEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMV 337
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
++ V GF P+ +Y+ ++ GL AL + + +G P+ + + L
Sbjct: 338 QLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ GL E +M +G +P + + +VN
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 6/293 (2%)
Query: 107 LLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
LL + +KR + F + L +D AV + + + P T+N ++ L
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 167 ANRLYDVAGEVYEAA-PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
N + A EVY +E D+ N LI G C+ G + A ++ + +G P+
Sbjct: 298 KNSKFQEA-EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQ 356
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
T+ +L+ GLC +G A + G+ P+V+++N LI + +
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
M KG P V ++ ++ GL +A +V+ M+S+G+ P +F L+ G +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 346 TEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRNYESTCVSLDEILEGC 396
E L M+ G P + + ++N C SK + T ++ E +GC
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE--KGC 527
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 105/252 (41%), Gaps = 4/252 (1%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D V+ ++S F P TFN +++ + A E+ + V+ D N L
Sbjct: 446 DGLVKVMISKGYF---PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ GLC+ + ++ + + G PN+ TF+ L+ LC ++EA LE+M+ V
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK-GFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD V F LI + M + +Y +++ + A
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAE 622
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
++ + MV R P +++ +V G C+ L +M+ GF+P + ++NC
Sbjct: 623 KLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL 682
Query: 376 VSKPRNYESTCV 387
+ R YE+ +
Sbjct: 683 CVEDRVYEAAGI 694
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ + +ET +M + C P+ TFN +L L R D A + E +V DA
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKS-GLEPNVRTFSTLMHGLCEK---GMVEEAFEWLEK 250
LI G C+ G+L A +F + ++ + + T++ ++H EK M E+ F+ E
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ--EM 628
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
+++C + PD + +++ L M+ GF P++ + +V+ L R
Sbjct: 629 VDRC-LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDR 687
Query: 311 FIEALEVVEGMVSRGFVPSFVS 332
EA ++ MV +G VP V+
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAVN 709
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 137/312 (43%), Gaps = 5/312 (1%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHV-ARRIDKA 139
F+ + +I+ H+ +LLH + + F + + ++V ++ ++ +
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTS-SSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLS 113
Query: 140 VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKG 199
+ M D P FN++L +V + ++ + V +D ILIKG
Sbjct: 114 ISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVV-LDVYSFGILIKG 172
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
C+ GE+ + + E + G PNV ++TL+ G C+KG +E+A + +M K G+ +
Sbjct: 173 CCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVAN 232
Query: 260 VVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
+ VLI + + M G +PN+ +Y V+ L R +A +V +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 320 GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVS 377
M RG + V++ L+ GLCR + E + + QM G P + + +++ C V
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 378 KPRNYESTCVSL 389
K S C L
Sbjct: 353 KLGKALSLCRDL 364
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 112/231 (48%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
A I+K+ + L+ + +F P+ + +++ + A +++ +L + +
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+LI GL + G +++++ + G+ PN+ T++ +M+ LC+ G ++AF+ ++M
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR 295
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ GV ++V +N LI V+D M G PN+ +Y ++ G +
Sbjct: 296 ERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLG 355
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+AL + + SRG PS V++ LV G CR T +++M +G P
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
I+KA + M + RT+ ++N L N + E+YE V + N
Sbjct: 213 EIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN 272
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++ LC+ G A +VFDE + G+ N+ T++TL+ GLC + + EA + +++M+
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ P+++ +N LI + + +G P++ +Y ++ G A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGA 392
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
++V+ M RG PS V++ L+ R E+ M G VP + + ++
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 141/341 (41%), Gaps = 39/341 (11%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLI--KLYAHVARRIDK 138
F+P T+LI ++ L + K +++ +T++ L+ + ++ +
Sbjct: 194 FSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKK--Q 251
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
E M + +P+ T+N V+N L + A +V++ V + N LI
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM-------------------------- 232
GLC++ +L+ A KV D+ G+ PN+ T++TL+
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 233 ---------HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL 283
G C KG A + +++ME+ G+ P V + +LI +
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 284 DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
M G P+V +Y +++G + EA + + MV + P+ V + +++G C+
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 344 RRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
+ L++M + P + +R+++ + ++ E+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 1/208 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TLI + V + + KA+ + PS T+N +++ A ++ +
Sbjct: 341 YNTLIDGFCGVGK-LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
++ ILI + + A+++ + GL P+V T+S L+HG C KG +
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA + M + P+ V++N +I +L M K PNV SY+ +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ L ++ EA +VE M+ G PS
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
LI +A + ++KA++ LSM + P T++ +++ + A ++++
Sbjct: 414 LIDTFAR-SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
E + N +I G C++G A+K+ E + L PNV ++ ++ LC++ +EA
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 245 FEWLEKMEKCGVCPDVVVFNVL 266
+EKM G+ P + +++
Sbjct: 533 ERLVEKMIDSGIDPSTSILSLI 554
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 20/348 (5%)
Query: 63 NHPSSAVTLLHLYTARKDFNPTEPFCTSL------ITKLAHANLLDPI-HTLLHQTLKRR 115
N PS+A+ L + NP PF SL ITKL + + D + LLH R
Sbjct: 20 NDPSAAMKLFR-NPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFDELDQVLLHLKTDTR 78
Query: 116 SFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAG 175
+ F + + + +A+ MP ++C +RT V ++ G
Sbjct: 79 IVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRC---QRT---VKSLNSLLSALLKCG 132
Query: 176 EVYEAAPRLAV-----EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
E+ + RL+ + DAC NILI G Q G A+K+FDE K ++P TF T
Sbjct: 133 ELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGT 192
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKC-GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK 289
L+HGLC+ V+EA + M K GV P V ++ LI + D
Sbjct: 193 LIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG 252
Query: 290 GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
+ Y ++ L+ A R E ++E M +G P V++ L+ G C +E
Sbjct: 253 KIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
Query: 350 DWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGCN 397
+ L +MV +G P + + I+ + E+T + D GC+
Sbjct: 313 NRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 87/169 (51%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LIK LCQ GELS A K+ DE + ++ + +STL+ L + G E LE+M + G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD V +NVLI VLD MV KG P+V SY +L K++ EA
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
+ E M RG P +S++ + GLC + EE L +M+ +G+ PR
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 104/224 (46%), Gaps = 5/224 (2%)
Query: 171 YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
+ + E YE ++VDA + LI L + G + + +E + G +P+ T++
Sbjct: 243 FKLKDEAYEGK----IKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNV 298
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
L++G C + E A L++M + G+ PDV+ +N+++ + + M R+G
Sbjct: 299 LINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRG 358
Query: 291 FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
P+ SY+ V GL + +F EA +++ M+ +G+ P + + LC + E +
Sbjct: 359 CSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILS 418
Query: 351 WALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
+ + R G +W ++ +P +S + L+ + E
Sbjct: 419 KVISSLHR-GIAGDADVWSVMIPTMCKEPVISDSIDLLLNTVKE 461
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
++LI+ L A + + +L + ++ D + ++ V + A L M +
Sbjct: 262 STLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P ++N +L V + ++ A ++E PR D I+ GLC+ +
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A + DE G +P + LCE G +E + + + + G+ D V++V+I
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMI 439
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 4/284 (1%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLI--KLYAHVARRIDK 138
+ P+ SL+ H N + L+ Q ++ D FT + L+ H + +
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH--NKASE 188
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
AV + M C P T+ V+N L D+A + + +E D + +I
Sbjct: 189 AVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID 248
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
LC+ + A+ +F E G+ P+V T+S+L+ LC G +A L M + + P
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINP 308
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+VV FN LI + D M+++ PN+ +Y ++ G R EA ++
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
MVS+ +P V++ L+ G C+ ++ + R M R+G V
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLV 412
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 117/253 (46%), Gaps = 7/253 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ + H RI +AV + M + P TF +++ L ++ A E R
Sbjct: 140 SLLNGFCH-GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ---HNKASEAVALVER 195
Query: 184 LAV---EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ V + D +I GLC++GE A+ + ++ K +E +V +ST++ LC+
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH 255
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V++A +M+ G+ PDV ++ LI +L M+ + PNV ++
Sbjct: 256 VDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNS 315
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + IEA ++ + M+ R P+ V++ L+ G C H R +E MV +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 361 FVPRMGMWRHIVN 373
+P + + ++N
Sbjct: 376 CLPDVVTYNTLIN 388
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 114/246 (46%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D+AV+ M + +PS F+ +L+ + + +D+ E L V + N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I LC++ +LS A+ + + K G P++ T ++L++G C + EA +++M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD V F L+ +++ MV KG P++ +Y V+ GL A
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L ++ M V + ++ LC++R ++ +M +G P + + +++C
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 375 AVSKPR 380
+ R
Sbjct: 285 LCNYGR 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 5/296 (1%)
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR--RIDKAVETLLSMPDFQCWPSRRTF 158
LD L + +K R F F+ KL + +A+ + D + M + T+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFS--KLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
N ++N L A + +L +N L+ G C +S AV + D+ +
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE 163
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
G +P+ TF+TL+HGL + EA +E+M G PD+V + +I
Sbjct: 164 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 223
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+L+ M + +V Y V+ L + +AL + M ++G P ++ L+
Sbjct: 224 ALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLIS 283
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
LC + R + L M+ + P + + +++ + + E+ + DE+++
Sbjct: 284 CLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL-FDEMIQ 338
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 135/320 (42%), Gaps = 4/320 (1%)
Query: 56 TTLCNSLNHPSSAVTLLHLYTA--RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
+T+ +SL L+L+T K P +SLI+ L + LL L+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 114 RRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD 172
R+ + F +LI +A + I+ A + M P+ T+N ++N + D
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIE-AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
A +++ D N LI G C+ ++ +++F + + GL N T++TL+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
HG + + A ++M GV P+++ +N L+ V + + +
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482
Query: 293 PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
P++ +Y + G+ A + + ++ + +G P +++ ++ G C+ EE
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Query: 353 LRQMVRQGFVPRMGMWRHIV 372
+M G +P G + ++
Sbjct: 543 FIKMKEDGPLPDSGTYNTLI 562
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 132/287 (45%), Gaps = 13/287 (4%)
Query: 93 TKLAHANLLDPIHTLLHQTLKRRSFSD--DF---FFTLIKLYAH-VARRIDKAVETLLSM 146
T+L L D I L +K R F DF ++KL + V + K +E L
Sbjct: 59 TRLRDIKLNDAID-LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
D TFN V+N +A + +L E D + L+ G C++ +
Sbjct: 118 NDLY------TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
S AV + D+ + G +P++ ++ ++ LC+ V +AF++ +++E+ G+ P+VV + L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ +L M++K PNV +Y +L + + +EA E+ E MV
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
P V++ L+ GLC H R +E + MV +G + + + ++N
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLIN 338
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 2/235 (0%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVA-NRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A+ L M P R T ++N NR+ D A + + + + D N +I
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSD-AVSLVDKMVEIGYKPDIVAYNAII 197
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
LC+ ++ A F E + G+ PNV T++ L++GLC +A L M K +
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P+V+ ++ L+ + + MVR P++ +Y ++ GL R EA ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ MVS+G + VS+ L+ G C+ +R E+ R+M ++G V + ++
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 104/236 (44%), Gaps = 2/236 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+ AV + M + P +N +++ L + + A + ++ R + +
Sbjct: 170 RVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYT 229
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
L+ GLC S A ++ + K + PNV T+S L+ + G V EA E E+M +
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ PD+V ++ LI + D+MV KG +V SY ++ G AKR +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
+++ M RG V + V++ L+ G + ++ QM G P +W +
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP--DIWTY 403
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 128/286 (44%), Gaps = 2/286 (0%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RI 136
RK P T+L+ L +++ LL +K++ + ++ + L A V ++
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL-LDAFVKNGKV 276
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
+A E M P T++ ++N L + D A ++++ D N L
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I G C+ + +K+F E + GL N T++TL+ G + G V++A E+ +M+ G+
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PD+ +N+L+ + + M ++ ++ +Y V+ G+ + EA
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+ + +G P V++ ++ GLC EV+ +M ++G +
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 502
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 113/242 (46%), Gaps = 3/242 (1%)
Query: 122 FFTLI-KLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F TLI L+ H + +A+ + M C P T+ V+N L D+A +
Sbjct: 189 FNTLIHGLFLH--NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ +E N +I GLC+ + A+ +F E G+ PNV T+S+L+ LC G
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+A L M + + PDV F+ LI + D MV++ P++ +Y
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ G R EA ++ E MVS+ P V++ L+ G C+++R EE R+M ++G
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 361 FV 362
V
Sbjct: 427 LV 428
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 122/252 (48%), Gaps = 7/252 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H ++RI +AV + M P+ TFN +++ L L++ A E R
Sbjct: 156 SLLNGYCH-SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLF---LHNKASEAMALIDR 211
Query: 184 LAV---EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + D +++ GLC++G+ A + ++ + LEP V ++T++ GLC+
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+++A ++ME G+ P+VV ++ LI +L M+ + P+V ++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + + +EA ++ + MV R PS V++ L+ G C H R +E MV +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 361 FVPRMGMWRHIV 372
P + + ++
Sbjct: 392 CFPDVVTYNTLI 403
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D AV M + +PS F+ +L+ + +DV + E L + + +
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C++ +L A+ V + K G EPN+ T S+L++G C + EA +++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G P+ V FN LI ++D MV KG P++ +Y V+ GL A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
++ M P + + ++ GLC+++ ++ ++M +G P + + +++C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 375 AVSKPR 380
+ R
Sbjct: 301 LCNYGR 306
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 153/368 (41%), Gaps = 9/368 (2%)
Query: 11 ARTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQ--ATTLCNSL---NHP 65
A+ P L + C + +TD +L + +Q L P T+ + L H
Sbjct: 214 AKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHM 272
Query: 66 SSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT- 124
A+ L K P +SLI+ L + LL ++R+ D F F+
Sbjct: 273 DDALNLFK-EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
LI + + ++ A + M PS T++ ++N + D A +++E
Sbjct: 332 LIDAFVKEGKLVE-AEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
D N LIKG C+ + ++VF E + GL N T++ L+ GL + G + A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
E ++M GV P+++ +N L+ V + + R P + +Y ++ G
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG 510
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
+ A + + ++ + +G P V++ ++ G CR EE D ++M G +P
Sbjct: 511 MCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 365 MGMWRHIV 372
G + ++
Sbjct: 571 SGCYNTLI 578
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 147/344 (42%), Gaps = 13/344 (3%)
Query: 43 RFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLD 102
RF + + A T+ PS + ++ + ++ E + +++L LD
Sbjct: 13 RFVHRSLVVRGNAATV-----SPSFSFFWRRAFSGKTSYDYREKLSRNGLSELK----LD 63
Query: 103 PIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR--RIDKAVETLLSMPDFQCWPSRRTFNF 160
L + +K R F F+ KL + +A+ + D + M + + T++
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFS--KLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG 220
++N +A V +L E + ++ L+ G C +S AV + D+ +G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
+PN TF+TL+HGL EA +++M G PD+V + V++
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
+L+ M + P V Y ++ GL K +AL + + M ++G P+ V++ L+ L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 341 CRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
C + R + L M+ + P + + +++ V + + E+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 108/229 (47%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
++N V+N L + +A V + E D ++ LI G CQ + A+ + +
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
+ G P+V ++T++ G C+ G+V +A E ++ME+ GV D V +N L+
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
++ MV + PNV ++ V+ + +F EA+++ E M R P ++ L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYEST 385
+ GLC H R +E L MV +G +P + + ++N R E T
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
+ +++K+A + D + +L H D + + ++ R A+ + M
Sbjct: 73 SKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMK 132
Query: 149 FQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
F P T + ++N NR++D A ++ + D N +I G C+ G ++
Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFD-AIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
AV++FD + G+ + T+++L+ GLC G +A + M + P+V+ F +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+ + M R+ P+V +Y ++ GL R EA ++++ MV++G +
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
P V++ L+ G C+ +R +E R+M ++G V + I+
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
R+ A++ + M + P +N +++ L + A E+++ R V DA
Sbjct: 152 GNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVT 211
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
N L+ GLC G S A ++ + + PNV TF+ ++ ++G EA + E+M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMT 271
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ V PDV +N LI +LD+MV KG P+V +Y ++ G +KR
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
E ++ M RG V +++ ++ G + R + +M
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 103/243 (42%), Gaps = 19/243 (7%)
Query: 122 FFTLIKLYAHVARR-IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F +KLY + RR +D P T+N ++N L + D A ++ +
Sbjct: 260 FSEAMKLYEEMTRRCVD---------------PDVFTYNSLINGLCMHGRVDEAKQMLDL 304
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
D N LI G C+ + K+F E + GL + T++T++ G + G
Sbjct: 305 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 364
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+ A E +M+ P++ +++L+ + + M + ++ +Y
Sbjct: 365 PDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 421
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V++G+ +A ++ + +G P VS+ ++ G CR R+ ++ D R+M G
Sbjct: 422 VIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDG 481
Query: 361 FVP 363
+P
Sbjct: 482 LLP 484
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 35/249 (14%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+++ ++ M + PS F+ VL+ + ++ YD+ ++ + D NI
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I LC+ A+ V + K G EP+V T S+L++G C+ V +A + + KME+
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE-- 167
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
GF P+V Y ++ G +A+
Sbjct: 168 ---------------------------------MGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
E+ + M G V++ LV GLC R + +R MV + VP + + +++
Sbjct: 195 ELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVF 254
Query: 376 VSKPRNYES 384
V + + E+
Sbjct: 255 VKEGKFSEA 263
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMP 147
+LI + +D L + +R D + T+I+ Y R A + + S
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR--PDAAQEIFSRM 375
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
D + P+ RT++ +L L N + A ++E + +E+D NI+I G+C+ G +
Sbjct: 376 DSR--PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
A +F GL+P+V +++T++ G C K +++ KM++ G+ P
Sbjct: 434 DAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 72 LHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYA 130
L+ R+ +P SLI L +D +L + + D + TLI +
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFC 325
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
++R+D+ + M T+N ++ D A E++ R+ +
Sbjct: 326 K-SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNI 381
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
+IL+ GLC + A+ +F+ KS +E ++ T++ ++HG+C+ G VE+A++
Sbjct: 382 RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRS 441
Query: 251 MEKCGVCPDVVVFNVLI 267
+ G+ PDVV + +I
Sbjct: 442 LSCKGLKPDVVSYTTMI 458
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D +++ M + PS F+ +L+ + + YDV ++E L + + C N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 195 ILIKGLCQQGELSAAVK-----------------------------------VFDEFPKS 219
IL+ C+ +LS A+ +FD+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
G +PNV ++T++ GLC+ V+ A + L +MEK G+ PDVV +N LI
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
++ M ++ YP+V ++ ++ + R EA E E M+ R P V++ L+ G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
LC + R +E + MV +G P + + ++N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 2/284 (0%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
+ P ++I L + +D LL++ K D + + + R A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ M + +P TFN +++ V A E YE R +++ D ++LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C L A ++F G P+V T+S L++G C+ VE + +M + GV +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V + +LI + MV G +PN+ +Y +L+GL D + +AL ++
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR-QGFVP 363
M G V++ ++ G+C+ + W + + QG +P
Sbjct: 422 MQKNGMDADIVTYNIIIRGMCKAGEVADA-WDIYCSLNCQGLMP 464
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+ A+ M P+ +N +++ L ++ D A ++ + + D N
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI GLC G S A ++ K + P+V TF+ L+ ++G V EA E+ E+M +
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ PD+V +++LI + MV KG +P+V +Y ++ G +K+
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
+++ M RG V + V++ L+ G CR + + R+MV G P +
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 116/275 (42%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
SLI+ L + ++ KR + D F F + R+ +A E M
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P T++ ++ L D A E++ D +ILI G C+ ++
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
+K+F E + G+ N T++ L+ G C G + A E +M CGV P+++ +NVL+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+L M + G ++ +Y ++ G+ A +A ++ + +G +P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++ +++GL + E D R+M G +P
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ LI+ Y A +++ A E M P+ T+N +L+ L N + A +
Sbjct: 364 YTILIQGYCR-AGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADM 422
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ ++ D NI+I+G+C+ GE++ A ++ GL P++ T++T+M GL +KG+
Sbjct: 423 QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLR 482
Query: 242 EEAFEWLEKMEKCGVCPD 259
EA KM++ G+ P+
Sbjct: 483 READALFRKMKEDGILPN 500
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Query: 122 FFTLIK-LYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F TL+K L+ A ++ A L M D P TF+ + + +N + A VYE
Sbjct: 287 FNTLLKGLFK--AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
A V+++A +IL+ LC++G++ A ++ GL PN ++T++ G C KG
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGD 404
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+ A +E MEK G+ PD + +N LI ++ M KG P+V +Y
Sbjct: 405 LVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNI 464
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ G F + ++++ M G +P+ VS+ L+ LC+ + E R M +G
Sbjct: 465 LIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRG 524
Query: 361 FVPRMGMWRHIVNCAVSKPR 380
P++ ++ +++ SK +
Sbjct: 525 VSPKVRIYNMLIDGCCSKGK 544
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+ K +E M + +PS +N +++ L + + A ++++ + N
Sbjct: 195 VGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNT 254
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G C+ G + KV + +EP++ TF+TL+ GL + GMVE+A L++M+ G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD F++L V + V G N + +L L + +A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
E++ +++G VP+ V + ++ G CR + M +QG P
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 129/298 (43%), Gaps = 35/298 (11%)
Query: 111 TLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRL 170
+L S DF + L+ + + ++ I +A + ++ + +PS + +L+ LV +
Sbjct: 100 SLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQ 159
Query: 171 YDVA-------------------GEVYEAAPRLA----------------VEVDACCMNI 195
+ V G+ +AA +L+ + N+
Sbjct: 160 FRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNV 219
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI GLC+ ++ A ++FDE L P++ T++TL+ G C+ G E++F+ E+M+
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P ++ FN L+ VL M GF P+ ++ + G ++ AL
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V E V G + + L+ LC+ + E+ + L + + +G VP ++ +++
Sbjct: 340 GVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS T+N ++ +D ++ + + LI LC+ +L A V
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ G+ P VR ++ L+ G C KG +E+AF + ++M K G+ ++V +N LI
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+L + RKG P+V +Y ++ G A + + E M G P+ +
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ L++ LC E ++ R P + ++ +++C
Sbjct: 637 Y-HLLISLCTK---EGIELTERLFGEMSLKPDLLVYNGVLHC 674
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 5/248 (2%)
Query: 112 LKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY 171
LK S S + + LI Y DK + L M D P+ ++ ++N L
Sbjct: 452 LKGVSPSVETYNILIGGYGR-KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKL 510
Query: 172 DVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTL 231
A V V N+LI G C +G++ A + E K G+E N+ T++TL
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 232 MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+ GL G + EA + L ++ + G+ PDV +N LI + + M R G
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 292 YPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDW 351
P + +Y ++ L K IE E + G +S P + + ++ H E+
Sbjct: 631 KPTLKTYHLLIS--LCTKEGIELTERLFGEMS--LKPDLLVYNGVLHCYAVHGDMEKAFN 686
Query: 352 ALRQMVRQ 359
+QM+ +
Sbjct: 687 LQKQMIEK 694
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 12/203 (5%)
Query: 160 FVLNVLVANRLYDVAGEV------YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
F N L++ Y AG V YE R ++ ++LI LC + + ++F
Sbjct: 600 FTYNSLISG--YGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLF 656
Query: 214 DEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXX 273
E L+P++ ++ ++H G +E+AF ++M + + D +N LI
Sbjct: 657 GEMS---LKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKV 713
Query: 274 XXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
++D M + P +Y ++ G + K ++ A M +GF+
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIG 773
Query: 334 KQLVVGLCRHRRTEEVDWALRQM 356
+LV GL R++E + + +M
Sbjct: 774 NELVSGLKEEWRSKEAEIVISEM 796
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 135/296 (45%), Gaps = 6/296 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFF-FTLIKLYAHVARRIDKAVETLLSMP 147
T L+T A+ + + Q ++ S D + FT++ R+ A+ L M
Sbjct: 75 TRLLTATANLRRYETV-IYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 148 DFQCWPSRRTFNFVLNVL-VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
PS TF +L+ + NR+ D A + + E + N LI GLC+ GEL
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGD-AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL 192
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
+ A+++ +E K GL +V T++TL+ GLC G +A L M K + PDVV F L
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I + M++ PN +Y ++ GL R +A + + M S+G
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPR 380
P+ V++ L+ G C+ R +E ++M +GF + + +++ C V K R
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 118/279 (42%), Gaps = 2/279 (0%)
Query: 106 TLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
LL R+FSD + L + H + R + A M Q PS F +L
Sbjct: 24 NLLGGGAAARAFSD-YREKLRTGFLH-SIRFEDAFALFFEMVHSQPLPSIVDFTRLLTAT 81
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
R Y+ + + D ILI C+ LS A+ V + K G EP++
Sbjct: 82 ANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSI 141
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
TF +L+HG C + +AF + M K G P+VVV+N LI +L+
Sbjct: 142 VTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNE 201
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
M +KG +V +Y +L GL + R+ +A ++ M+ R P V+F L+ +
Sbjct: 202 MEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN 261
Query: 346 TEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
+E ++M++ P + I+N R Y++
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 134/343 (39%), Gaps = 39/343 (11%)
Query: 58 LCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSF 117
L N + S V L+ + + P +LI L L+ LL++ K+
Sbjct: 153 LVNRIGDAFSLVILM----VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG 208
Query: 118 SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEV 177
+D + + + R A L M P TF +++V V D A E+
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
Y+ + +V+ + N +I GLC G L A K FD G PNV T++TL+ G C+
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV-- 295
MV+E + ++M G D+ +N LI + MV + P++
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 296 ---------------------------------GSYQQVLYGLLDAKRFIEALEVVEGMV 322
+Y +++GL A + +A E+ +
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
G P ++ +++GLC++ E D +R+M +G + +M
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQM 491
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%)
Query: 77 ARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
++ PT +LI LD L HQ K R+ D F ++ + ++
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A M P+ F +++ N D+ E Y+ ++ D N L
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ G C+ G+L AA + D + GL P+ T++TL+ G C G VE A E ++M++ G+
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
D V F+ L+ L M+R G P+ +Y ++ +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+++ M S G VPS V++ L+ GLC+ + + D L M+ G VP
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 127/286 (44%), Gaps = 5/286 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR-RIDKAVETLLSMP 147
++LI L N +D H L + KR +D FT + ++ H ID E+ M
Sbjct: 314 SALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL-IHGHSRNGEIDLMKESYQKML 372
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
P +N ++N N A + + R + D LI G C+ G++
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A+++ E ++G+E + FS L+ G+C++G V +A L +M + G+ PD V + +++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+L M G P+V +Y +L GL + A +++ M++ G V
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
P +++ L+ G RH + + Q G V + ++ IVN
Sbjct: 553 PDDITYNTLLEGHHRHANSSK---RYIQKPEIGIVADLASYKSIVN 595
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
E+ +A L V V NIL+ C++G +S A KVFDE K L+P V +F+TL++G
Sbjct: 230 EILDAGFPLNVYV----FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
C+ G ++E F +MEK PDV ++ LI + D M ++G PN
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
+ +++G E + M+S+G P V + LV G C++ +
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 356 MVRQGFVP 363
M+R+G P
Sbjct: 406 MIRRGLRP 413
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 35/241 (14%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKG------------------ 199
FN ++N A +V++ + +++ N LI G
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 200 -----------------LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
LC++ ++ A +FDE K GL PN F+TL+HG G ++
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID 362
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
E +KM G+ PD+V++N L+ ++D M+R+G P+ +Y ++
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLI 422
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
G ALE+ + M G V F LV G+C+ R + + ALR+M+R G
Sbjct: 423 DGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIK 482
Query: 363 P 363
P
Sbjct: 483 P 483
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 74/159 (46%)
Query: 215 EFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
E +G NV F+ LM+ C++G + +A + +++ K + P VV FN LI
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
+ M + P+V +Y ++ L + A + + M RG +P+ V F
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 335 QLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
L+ G R+ + + + ++M+ +G P + ++ +VN
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 130/274 (47%), Gaps = 15/274 (5%)
Query: 102 DPIHTLLHQTLKR--RSFSDDFFFTLIKLYAHVARRIDKAVE--TLLSMPDFQC-WPSRR 156
D ++ L Q +++ RS + F + LY+ RR+ +A + T+ + +Q + +
Sbjct: 61 DSKNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIK 120
Query: 157 TFNFVLNVLVANRLYDVAG------EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
+ +FV+ +++ LY +G ++++ P L E N L+ +L A+
Sbjct: 121 SEDFVIRIML---LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAM 177
Query: 211 KVFDEFP-KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
K F E P K G+ P++ T++T++ LC KG +++ E++EK G PD++ FN L+
Sbjct: 178 KTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEE 237
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ D+M K PN+ SY + GL K+F +AL +++ M + G P
Sbjct: 238 FYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPD 297
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++ L+ EEV +M +G P
Sbjct: 298 VHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTP 331
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/286 (20%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSF-SDDFFFTLIKLYAHVARRIDKAVETLLSMP 147
++ I +L A I +L K S+DF ++ LY + + A + MP
Sbjct: 91 SAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGM-AEHAHKLFDEMP 149
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP-RLAVEVDACCMNILIKGLCQQGEL 206
+ C + ++FN +L+ V ++ D A + ++ P +L + D N +IK LC++G +
Sbjct: 150 ELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSM 209
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
+ +F+E K+G EP++ +F+TL+ + + E + M+ + P++ +N
Sbjct: 210 DDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSR 269
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ ++D+M +G P+V +Y ++ E ++ M +G
Sbjct: 270 VRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGL 329
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
P V++ L+ LC+ + + ++ + R M++ +V
Sbjct: 330 TPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVV 375
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVCPDVVVFNVLI 267
A K+FDE P+ E V++F+ L+ ++EA + +++ EK G+ PD+V +N +I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+ + + + GF P++ S+ +L + F+E + + M S+
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
P+ S+ V GL R+++ + + M +G P + + ++
Sbjct: 261 PNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 2/307 (0%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRID 137
+D P T++I+ + L H+ + D FT LI Y D
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A M C P+ T+ +++ L D A E+ ++ ++ + N ++
Sbjct: 440 -AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
GLC+ G + AVK+ EF +GL + T++TLM C+ G +++A E L++M G+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P +V FNVL+ +L+ M+ KG PN ++ ++ A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVS 377
+ M SRG P +++ LV G C+ R +E + ++M +GF + + ++ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 378 KPRNYES 384
+ + E+
Sbjct: 679 RKKFLEA 685
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+D A E L M P+ T+N ++N L + + A ++ + D
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ C+ GE+ A ++ E GL+P + TF+ LM+G C GM+E+ + L M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+ FN L+ + M +G P+ +Y+ ++ G A+ EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
+ + M +GF S ++ L+ G + ++ E QM R+G ++ +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 376 VSKPRNYESTCVSLDEILE 394
K + ++ +DEI+E
Sbjct: 712 Y-KGKRPDTIVDPIDEIIE 729
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A E + R + D LI G C++G++ AA K F E + P+V T++ ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
G C+ G + EA + +M G+ PD V F LI V + M++ G P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
NV +Y ++ GL A E++ M G P+ ++ +V GLC+ EE
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 6/229 (2%)
Query: 149 FQCWPSR-RTFNFVLNVLVANRLYDVAGEVYEAAPR--LAVEVDACCMNILIKGLCQQGE 205
++ W S R F+ VLV L A V+E L + VD+C N+ + L +
Sbjct: 168 YKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC--NVYLTRLSKDCY 225
Query: 206 LSA-AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
+A A+ VF EFP+ G+ NV +++ ++H +C+ G ++EA L ME G PDV+ ++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
++ ++++M RKG PN Y ++ L + EA E M+ +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
G +P V + L+ G C+ +M + P + + I++
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D + ++ G C+ GEL K+ + + GL+PN + +++ LC + EA E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+M + G+ PD VV+ LI M + P+V +Y ++ G
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
+EA ++ M +G P V+F +L+ G C+ ++ M++ G P + +
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 369 RHIVN 373
+++
Sbjct: 460 TTLID 464
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TL+ Y + +DKA E L M P+ TFN ++N + + + ++
Sbjct: 529 YTTLMDAYCK-SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ +A N L+K C + L AA ++ + G+ P+ +T+ L+ G C+ +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
+EA+ ++M+ G V ++VLI V D M R+G
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 135/307 (43%), Gaps = 2/307 (0%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRID 137
+D P T++I+ + L H+ + D FT LI Y D
Sbjct: 380 RDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKD 439
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A M C P+ T+ +++ L D A E+ ++ ++ + N ++
Sbjct: 440 -AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
GLC+ G + AVK+ EF +GL + T++TLM C+ G +++A E L++M G+
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P +V FNVL+ +L+ M+ KG PN ++ ++ A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVS 377
+ M SRG P +++ LV G C+ R +E + ++M +GF + + ++ +
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 378 KPRNYES 384
+ + E+
Sbjct: 679 RKKFLEA 685
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+D A E L M P+ T+N ++N L + + A ++ + D
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ C+ GE+ A ++ E GL+P + TF+ LM+G C GM+E+ + L M G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+ FN L+ + M +G P+ +Y+ ++ G A+ EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
+ + M +GF S ++ L+ G + ++ E QM R+G ++ +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711
Query: 376 VSKPRNYESTCVSLDEILE 394
K + ++ +DEI+E
Sbjct: 712 Y-KGKRPDTIVDPIDEIIE 729
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 80/175 (45%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A E + R + D LI G C++G++ AA K F E + P+V T++ ++
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
G C+ G + EA + +M G+ PD V F LI V + M++ G P
Sbjct: 395 GFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 454
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
NV +Y ++ GL A E++ M G P+ ++ +V GLC+ EE
Sbjct: 455 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 6/229 (2%)
Query: 149 FQCWPSR-RTFNFVLNVLVANRLYDVAGEVYEAAPR--LAVEVDACCMNILIKGLCQQGE 205
++ W S R F+ VLV L A V+E L + VD+C N+ + L +
Sbjct: 168 YKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC--NVYLTRLSKDCY 225
Query: 206 LSA-AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
+A A+ VF EFP+ G+ NV +++ ++H +C+ G ++EA L ME G PDV+ ++
Sbjct: 226 KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYS 285
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
++ ++++M RKG PN Y ++ L + EA E M+ +
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
G +P V + L+ G C+ +M + P + + I++
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D + ++ G C+ GEL K+ + + GL+PN + +++ LC + EA E
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+M + G+ PD VV+ LI M + P+V +Y ++ G
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
+EA ++ M +G P V+F +L+ G C+ ++ M++ G P + +
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 369 RHIVN 373
+++
Sbjct: 460 TTLID 464
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TL+ Y + +DKA E L M P+ TFN ++N + + + ++
Sbjct: 529 YTTLMDAYCK-SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ +A N L+K C + L AA ++ + G+ P+ +T+ L+ G C+ +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
+EA+ ++M+ G V ++VLI V D M R+G
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
R +AV + SM F P+ +N V+N L NR + A EV+ + + DA
Sbjct: 162 GNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
N LI GL G + A ++ + K ++PNV F+ L+ ++G + EA ++M
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ V P+V +N LI + D+MV KG +P+V +Y ++ G +KR
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ +++ M +G V ++ L+ G C+ + +MV G P + + ++
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 373 NCAVSKPR 380
+C + +
Sbjct: 402 DCLCNNGK 409
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 121/276 (43%), Gaps = 2/276 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMP 147
+LI+ L+++ LL +KR+ + FFT LI + ++ A M
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLE-ARNLYKEMI 281
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
P+ T+N ++N + A +++ D N LI G C+ +
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
+K+F E GL + T++TL+HG C+ G + A + +M CGV PD+V +N+L+
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+++ + + ++ +Y ++ GL + EA + + +G
Sbjct: 402 DCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVK 461
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P +++ ++ GLCR E D R+M GF+P
Sbjct: 462 PDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 105/239 (43%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ D A M + PS F VL V+ +D+ +Y L + D
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C+ LS A+ + + K G P++ T +L++G C+ +EA ++ M+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G P+VV++N +I V M +KG + +Y ++ GL ++ R+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++ MV R P+ + F L+ + E ++M+R+ VP + + ++N
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 7/267 (2%)
Query: 66 SSAVTLLHLYTARKDFNPTEPFCTSLI-TKLAHANLLDPIHTLLHQTLKRRSFSDDFFF- 123
+ A LL RK +P F T+LI T + NLL+ + L++ + RRS + F
Sbjct: 236 TDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARN--LYKEMIRRSVVPNVFTY 292
Query: 124 -TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
+LI + + + A M C+P T+N ++ ++ + +++
Sbjct: 293 NSLINGFC-IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+ DA N LI G CQ G+L+ A KVF+ G+ P++ T++ L+ LC G +E
Sbjct: 352 YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
+A +E ++K + D++ +N++I + + RKG P+ +Y ++
Sbjct: 412 KALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMI 471
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPS 329
GL EA ++ M GF+PS
Sbjct: 472 SGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ G CQ AV + D G PNV ++T+++GLC+ + A E MEK G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ D V +N LI +L MV++ PNV + ++ + +EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ + M+ R VP+ ++ L+ G C H + + MV +G P + + ++
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMP 147
+LIT + ++ L + + D F + TLI Y A +++ A + M
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQ-AGKLNVAQKVFNRMV 386
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
D P T+N +L+ L N + A + E + ++VD NI+I+GLC+ +L
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
A +F + G++P+ + T++ GLC KG+ EA + +M++ G P +++
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 74/170 (43%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
++R++ ++ M T+N +++ +VA +V+ V D
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
NIL+ LC G++ A+ + ++ KS ++ ++ T++ ++ GLC ++EA+ +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
+ GV PD + + +I + M GF P+ Y + L
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 3/245 (1%)
Query: 122 FFTLIKLYAHVAR--RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE 179
+ TLI Y + ++ KA L M + P+ TFN +++ + + +V++
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFK 320
Query: 180 AAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
V+ + N LI GLC G++S A+ + D+ +G++PN+ T++ L++G C+
Sbjct: 321 EMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKND 380
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
M++EA + ++ G P ++N+LI + + M R+G P+VG+Y
Sbjct: 381 MLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
++ GL A ++ + + S+G +P V+F L+ G CR + + L++M +
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 360 GFVPR 364
G PR
Sbjct: 500 GLKPR 504
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 160 FVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS 219
++ +L NR DV VY+ R ++ + N++I LC+ G+++ A V ++
Sbjct: 194 LMIALLKENRSADVE-YVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVY 252
Query: 220 GLEPNVRTFSTLMHGLCE---KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
G PNV +++TL+ G C+ G + +A L++M + V P++ FN+LI
Sbjct: 253 GCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNL 312
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
V M+ + PNV SY ++ GL + + EA+ + + MVS G P+ +++ L
Sbjct: 313 PGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNAL 372
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSK 378
+ G C++ +E + QG VP M+ +++ C + K
Sbjct: 373 INGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGK 416
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 18/229 (7%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+ +A++ S+ P+ R +N +++ D + E R + D N
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI GLC+ G + AA K+FD+ GL P++ TF LM G C KG +A L++M K G
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR-KGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ P + +N+++ + M + + NV SY +L G + +A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++ M+ +G VP+ +++ + +MV QGFVP
Sbjct: 561 NMLLNEMLEKGLVPNRITY----------------EIVKEEMVDQGFVP 593
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 17/267 (6%)
Query: 113 KRRSFSDDFFFTLIKLYAHVARRIDKAVETL---LSMPDFQCWPSRRTFNFVLNVLVANR 169
K RSF D F V D V ++ +SM D C S VL N
Sbjct: 119 KIRSFLDGF----------VRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVL-AYANNS 167
Query: 170 LYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFS 229
+++ E ++ + ++ A L+ L ++ + V+ E + ++PNV TF+
Sbjct: 168 RFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFN 227
Query: 230 TLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX---XXXXXXXXXXXXXVLDMM 286
+++ LC+ G + +A + +E M+ G P+VV +N LI VL M
Sbjct: 228 VVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM 287
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
V PN+ ++ ++ G +++V + M+ + P+ +S+ L+ GLC +
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347
Query: 347 EEVDWALRQMVRQGFVPRMGMWRHIVN 373
E +MV G P + + ++N
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALIN 374
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 100/230 (43%), Gaps = 2/230 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+I +A+ M P+ T+N ++N N + A +++ + N
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+LI C+ G++ + +E + G+ P+V T++ L+ GLC G +E A + +++
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PD+V F++L+ +L M + G P +Y V+ G A
Sbjct: 466 GL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 315 LEVVEGM-VSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ M R + S+ L+ G + + E+ + L +M+ +G VP
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 116/252 (46%), Gaps = 3/252 (1%)
Query: 122 FFTLI-KLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F TLI L+ H + +AV + M C P T+ V+N L D+A + +
Sbjct: 188 FNTLIHGLFLH--NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKK 245
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ +E D +I LC ++ A+ +F E G+ PNV T+++L+ LC G
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+A L M + + P+VV F+ LI + D M+++ P++ +Y
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ G R EA + E M+S+ P+ V++ L+ G C+ +R EE R+M ++G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 361 FVPRMGMWRHIV 372
V + ++
Sbjct: 426 LVGNTVTYNTLI 437
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 116/252 (46%), Gaps = 7/252 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H +RI +AV + M + P+ TFN +++ L L++ A E R
Sbjct: 155 SLLNGYCH-GKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF---LHNKASEAVALIDR 210
Query: 184 LAV---EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + D ++ GLC++G++ A+ + + K +E +V ++T++ LC
Sbjct: 211 MVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKN 270
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V +A +M+ G+ P+VV +N LI +L M+ + PNV ++
Sbjct: 271 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + + +EA ++ + M+ R P ++ L+ G C H R +E M+ +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 361 FVPRMGMWRHIV 372
P + + ++
Sbjct: 391 CFPNVVTYNTLI 402
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 108/246 (43%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D AV+ M + PS FN +L+ + +D+ + E L + D N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C++ +L A+ V + K G EP++ T S+L++G C + EA +++M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
P+ V FN LI ++D MV +G P++ +Y V+ GL A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L +++ M V + ++ LC ++ + +M +G P + + ++ C
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 375 AVSKPR 380
+ R
Sbjct: 300 LCNYGR 305
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 155/366 (42%), Gaps = 5/366 (1%)
Query: 11 ARTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQ-KDWLTPKQATTLCNSLNHPSSAV 69
AR P L + C + + D ++L + ++ K TT+ ++L + +
Sbjct: 213 ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVN 272
Query: 70 TLLHLYTA--RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LI 126
L+L+T K P SLI L + LL ++R+ + F+ LI
Sbjct: 273 DALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 332
Query: 127 KLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAV 186
+ + ++ A + M P T++ ++N + D A ++E
Sbjct: 333 DAFVKEGKLVE-AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
+ N LIKG C+ + +++F E + GL N T++TL+ GL + G + A +
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
+KM GV PD++ +++L+ V + + + P++ +Y ++ G+
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMG 366
A + + ++ + +G P+ + + ++ G CR EE D R+M G +P G
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Query: 367 MWRHIV 372
+ ++
Sbjct: 572 TYNTLI 577
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRI 136
++ +P +SLI + LD + + + F + + TLIK + A+R+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK-AKRV 411
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
++ +E M + T+N ++ L D+A ++++ V D +IL
Sbjct: 412 EEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSIL 471
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ GLC+ G+L A+ VF+ KS +EP++ T++ ++ G+C+ G VE+ ++ + GV
Sbjct: 472 LDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 531
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
P+V+++ +I + M G PN G+Y ++ L + E
Sbjct: 532 KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAE 591
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
+++ M S GFV S +V+ + R E+
Sbjct: 592 LIKEMRSCGFVGD-ASTISMVINMLHDGRLEK 622
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 89/180 (49%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N LI GL + S AV + D G +P++ T+ T+++GLC++G ++ A L+KMEK
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ DVV++ +I + M KG PNV +Y ++ L + R+ +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A ++ M+ R P+ V+F L+ + + E + +M+++ P + + ++N
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
+ P+ +SL+ H + L+ Q ++ D FT + + + +AV
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ M C P+ T+ V+N L D+A + +E + + +I L
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSL 270
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C+ A+ +F E G+ PNV T+S+L+ LC +A L M + + P+V
Sbjct: 271 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNV 330
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V FN LI + D M+++ P++ +Y ++ G R EA + E
Sbjct: 331 VTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 390
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
M+S+ P+ V++ L+ G C+ +R +E R+M ++G V
Sbjct: 391 MISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV 432
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 115/246 (46%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D A+ M + PS FN +L+ + + +D+ + E RL + + N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C++ ++S A+ + + K G EP++ T S+L++G C + +A +++M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD + F LI ++D MV++G PN+ +Y V+ GL A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
++ M + + V + ++ LC++R ++ +M +G P + + +++C
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 375 AVSKPR 380
+ R
Sbjct: 305 LCNYER 310
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H +RI AV + M + P TF +++ L L++ A E R
Sbjct: 160 SLLNGYCH-GKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF---LHNKASEAVALVDR 215
Query: 184 L---AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + + +++ GLC++G++ A + ++ + +E NV +ST++ LC+
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 275
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++A +ME GV P+V+ ++ LI +L M+ + PNV ++
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + + +EA ++ + M+ R P ++ L+ G C H R +E M+ +
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 395
Query: 361 FVPRMGMWRHIVN 373
P + + ++N
Sbjct: 396 CFPNVVTYNTLIN 408
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 35/267 (13%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R A L M + + P+ TFN +++ V A ++Y+ + +++ D +
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C L A +F+ PNV T++TL++G C+ ++E E +M +
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ + V + LI V MV G +PN+ +Y +L GL + +A
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 315 LEV-------------------VEGMVSRGFV----------------PSFVSFKQLVVG 339
+ V +EGM G V P + + ++ G
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMG 366
CR EE D R+M G +P G
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 125/314 (39%), Gaps = 39/314 (12%)
Query: 97 HANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR--RIDKAVETLLSMPDFQCWPS 154
H+ LD L +K R F F KL + +A+ + D + M +
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFN--KLLSAIAKMKKFDLVISLGEKMQRLGISHN 119
Query: 155 RRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFD 214
T+N ++N +A + +L E ++ L+ G C +S AV + D
Sbjct: 120 LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 215 EFPKSGLEPNVRTFSTLMH-----------------------------------GLCEKG 239
+ + G P+ TF+TL+H GLC++G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
++ AF L KME + +VV+++ +I + M KG PNV +Y
Sbjct: 240 DIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
++ L + +R+ +A ++ M+ R P+ V+F L+ + + E + +M+++
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 360 GFVPRMGMWRHIVN 373
P + + ++N
Sbjct: 360 SIDPDIFTYSSLIN 373
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 79/181 (43%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDK 138
KD P +LI A +D L + +R + +T + AR D
Sbjct: 394 KDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A M P+ T+N +L+ L N + A V+E R +E NI+I+
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
G+C+ G++ +F G++P+V ++T++ G C KG+ EEA KM + G P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 259 D 259
D
Sbjct: 574 D 574
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 140/350 (40%), Gaps = 37/350 (10%)
Query: 63 NHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFF 122
N+ S A TL +T P P LI L A++++ + Q D
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA--------NRLYDV- 173
+ + + +ID+ E M +C + T N V++ LV + YD+
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 174 ---------------------AGEVYEAAPRLAVEVDACC------MNILIKGLCQQGEL 206
+G +YEA +D C NILI G + GE
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
AA +F K G+ P+++T+S L+ LC G V+E + +++++ G+ PDVV +N++
Sbjct: 943 DAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI 1002
Query: 267 IXXXXXXXXXXXXXXVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
I + +M +G P++ +Y ++ L A EA ++ + G
Sbjct: 1003 INGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1062
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
P+ +F L+ G + E + MV GF P G + + N A
Sbjct: 1063 LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPNRA 1112
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 124/335 (37%), Gaps = 35/335 (10%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
F P+ +SL+ L +D + LL + + + FT+ A +I++A
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA------APRLAVEV------ 188
E L M D C P T+ +++ L R D A EV+E P +
Sbjct: 279 EILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRF 338
Query: 189 -----------------------DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
D IL+ LC+ G A D G+ PN+
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
T++TL+ GL +++A E ME GV P + V I +
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
M KG PN+ + LY L A R EA ++ G+ G VP V++ ++ +
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 346 TEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
+E L +M+ G P + + ++N R
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADR 553
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D A+E +M P+ T+ ++ + A E +E + + N
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+ L + G A ++F GL P+ T++ +M + G ++EA + L +M +
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PDV+V N LI + M P V +Y +L GL + EA
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR---QMVRQGFVPRMGMWRHI 371
+E+ EGMV +G P+ ++F L LC++ +EV AL+ +M+ G VP + + I
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKN---DEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 372 VNCAVSKPRNYESTC 386
+ V + E+ C
Sbjct: 650 IFGLVKNGQVKEAMC 664
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 1/237 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ I Y + A+ET M P+ N L L A +++
Sbjct: 436 YIVFIDYYGKSGDSV-SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 494
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ + D+ N+++K + GE+ A+K+ E ++G EP+V ++L++ L + V
Sbjct: 495 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRV 554
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+EA++ +M++ + P VV +N L+ + + MV+KG PN ++ +
Sbjct: 555 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR 358
L AL+++ M+ G VP ++ ++ GL ++ + +E QM +
Sbjct: 615 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
++K Y+ V ID+A++ L M + C P N ++N L D A +++ +
Sbjct: 509 MMKCYSKVGE-IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++ N L+ GL + G++ A+++F+ + G PN TF+TL LC+ V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
+ L KM G PDV +N +I M +K YP+ + +L G
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPG 686
Query: 305 LLDAKRFIEALEVV 318
++ A +A +++
Sbjct: 687 VVKASLIEDAYKII 700
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 1/203 (0%)
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEW 247
++A N LI L + + A++V+ G P+++T+S+LM GL ++ ++
Sbjct: 186 LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGL 245
Query: 248 LEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD 307
L++ME G+ P+V F + I +L M +G P+V +Y ++ L
Sbjct: 246 LKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT 305
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGM 367
A++ A EV E M + P V++ L+ +R + V +M + G VP +
Sbjct: 306 ARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVT 365
Query: 368 WRHIVNCAVSKPRNYESTCVSLD 390
+ +V+ A+ K N+ +LD
Sbjct: 366 FTILVD-ALCKAGNFGEAFDTLD 387
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 80/180 (44%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +++ L G+L VFD K ++ + T+ T+ L KG +++A L KM +
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G + +N LI V M+ +GF P++ +Y ++ GL +
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ +++ M + G P+ +F + L R + E L++M +G P + + +++
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+L E L+ G C A+ + D+ G EPNV ++T++ LCEKG V
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
A + L+ M+K G+ PDVV +N LI +L M+R G P+V ++ ++
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+ +EA + M+ R P+ V++ L+ GLC H +E L +V +GF
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFF 321
Query: 363 PRMGMWRHIVN 373
P + ++N
Sbjct: 322 PNAVTYNTLIN 332
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
F P+ SL+ H N +L+ Q + + + I +++ A+
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ L M P T+N ++ L + + V+ + R+ + D + LI
Sbjct: 205 DVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVY 264
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
++G+L A K ++E + + PN+ T+++L++GLC G+++EA + L + G P+
Sbjct: 265 GKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNA 324
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V +N LI +L +M R G + +Y + G A +F A +V+
Sbjct: 325 VTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGR 384
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRR 345
MVS G P +F L+ GLC H +
Sbjct: 385 MVSCGVHPDMYTFNILLDGLCDHGK 409
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F +L+ + HV R +A+ + + P+ +N +++ L + A +V +
Sbjct: 152 FGSLVNGFCHV-NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM 210
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
++ + D N LI L G + ++ + + G+ P+V TFS L+ ++G +
Sbjct: 211 KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQL 270
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA + +M + V P++V +N LI VL+++V KGF+PN +Y +
Sbjct: 271 LEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTL 330
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ G AKR + ++++ M G ++ L G C+ + + L +MV G
Sbjct: 331 INGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390
Query: 362 VPRM 365
P M
Sbjct: 391 HPDM 394
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 5/278 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSM 146
SLIT+L H+ +L + R S D F LI +Y + ++ A + M
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMM-RMGISPDVITFSALIDVYGKEGQLLE-AKKQYNEM 280
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
P+ T+N ++N L + L D A +V +A N LI G C+ +
Sbjct: 281 IQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRV 340
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
+K+ + G++ + T++TL G C+ G A + L +M CGV PD+ FN+L
Sbjct: 341 DDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNIL 400
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ L+ + + + +Y ++ GL A + +A + + +G
Sbjct: 401 LDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGV 460
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ-GFVP 363
P +++ +++GL R R E R+M ++ G +P
Sbjct: 461 SPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRID 137
K F P +LI A +D +L + D F + TL + Y A +
Sbjct: 318 KGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ-AGKFS 376
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL------AVEVDAC 191
A + L M P TFN +L+ L + G++ +A RL V
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDH------GKIGKALVRLEDLQKSKTVVGII 430
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
NI+IKGLC+ ++ A +F G+ P+V T+ T+M GL K + EA E KM
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Query: 252 EK 253
+K
Sbjct: 491 QK 492
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
+ P SL+ H N + L+ Q ++ D FT + + + +AV
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ M C P T+ V+N L D+A + +E + + +I L
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C+ A+ +F E G+ PNV T+S+L+ LC G +A L M + + P++
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V F+ LI + + M+++ PN+ +Y ++ G R EA +++E
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
M+ + +P+ V++ L+ G C+ +R ++ R+M ++G V
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLV 425
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/253 (22%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ + H RI AV + M + P TF +++ L L++ A E R
Sbjct: 153 SLLNGFCH-GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLF---LHNKASEAVALIDR 208
Query: 184 L---AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
+ + D ++ GLC++G+ A+ + ++ + +E NV +ST++ LC+
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRH 268
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++A +ME GV P+V+ ++ LI +L M+ + PN+ ++
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ + + ++A ++ E M+ R P+ ++ L+ G C R E L M+R+
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 361 FVPRMGMWRHIVN 373
+P + + ++N
Sbjct: 389 CLPNVVTYNTLIN 401
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+L E D +N L+ G C +S AV + D+ + G +P+ TF+TL+HGL
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA +++M + G PD+V + ++ +L+ M NV Y V+
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
L + +AL + M ++G P+ +++ L+ LC + R + L M+ +
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 363 PRMGMWRHIVNCAVSKPR 380
P + + +++ V K +
Sbjct: 321 PNLVTFSALIDAFVKKGK 338
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 10/274 (3%)
Query: 113 KRRSFSDDFFFTLIKLYAHVAR------RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
+RR+FS + Y V R +D A+ M + +PS F+ +L+ +
Sbjct: 34 RRRAFSGKTSYD----YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIA 89
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
+D+ E L + + NILI C+ LS A+ + + K G EP++
Sbjct: 90 KMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIV 149
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
T ++L++G C + +A +++M + G PD V F LI ++D M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
V++G P++ +Y V+ GL AL ++ M + + V + ++ LC++R
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269
Query: 347 EEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
++ +M +G P + + +++C + R
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R D A+ M + P+ T++ +++ L + A + + +
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
+ LI ++G+L A K+++E K ++PN+ T+S+L++G C + EA + LE M +
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIR 386
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
P+VV +N LI + M ++G N +Y +++G A+
Sbjct: 387 KDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 446
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
A V + MVS G P+ +++ L+ GLC++ + + + R P
Sbjct: 447 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEP 496
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R A L M + + P+ TF+ +++ V A ++YE + +++ + +
Sbjct: 303 RWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYS 362
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C L A ++ + + PNV T++TL++G C+ V++ E +M +
Sbjct: 363 SLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ + V + LI V MV G +PN+ +Y +L GL + +A
Sbjct: 423 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
+ V E + P ++ ++ G+C+
Sbjct: 483 MVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 127/304 (41%), Gaps = 7/304 (2%)
Query: 12 RTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQ-KDWLTPKQATTLCNSLNHPSSAVT 70
R P L + C + +TD +L + + K +T+ +SL
Sbjct: 212 RGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 271
Query: 71 LLHLYTA--RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIK 127
L+L+T K P +SLI+ L + LL ++R+ + F+ LI
Sbjct: 272 ALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALID 331
Query: 128 LYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL-VANRLYDVAGEVYEAAPRLAV 186
+ + + KA + M P+ T++ ++N + +RL + A ++ E R
Sbjct: 332 AFVKKGKLV-KAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE-AKQMLELMIRKDC 389
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
+ N LI G C+ + +++F E + GL N T++TL+HG + + A
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
++M GV P+++ +N+L+ V + + R P++ +Y ++ G+
Sbjct: 450 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Query: 307 DAKR 310
A +
Sbjct: 510 KAGK 513
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+L+ Y H ++RI AV + M + P TF +++ L + A + + +
Sbjct: 158 SLLNGYCH-SKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQ 216
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
+ D ++ GLC++G++ A+ + ++ + ++ NV F+T++ LC+ VE
Sbjct: 217 RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEV 276
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLY 303
A + +ME G+ P+VV +N LI +L M+ K PNV ++ ++
Sbjct: 277 AVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALID 336
Query: 304 GLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ +EA ++ E M+ R P +++ L+ G C H R +E + MV + +P
Sbjct: 337 AFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLP 396
Query: 364 RMGMWRHIVN 373
+ + ++N
Sbjct: 397 NIQTYNTLIN 406
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 113/246 (45%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D AV+ M + +PS FN +L+ + +++ + E L + D +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I I C++ +LS A+ V + K G EP++ T S+L++G C + +A +++M +
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD F LI ++D MV++G P++ +Y V+ GL A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
L ++ M + + V F ++ LC++R E +M +G P + + ++NC
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 375 AVSKPR 380
+ R
Sbjct: 303 LCNYGR 308
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 139/337 (41%), Gaps = 11/337 (3%)
Query: 28 FCTQPNTDRDTAILARFQQKDWLTPKQAT--TLCNSLNHP---SSAVTLLHLYTARKDFN 82
FC + A+LA+ + + P T +L N H S AV L+ +
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGY-EPDIVTLSSLLNGYCHSKRISDAVALVD-QMVEMGYK 185
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARR--IDKAV 140
P T+LI L N L+ Q ++R D T + + +R ID A+
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPD--LVTYGTVVNGLCKRGDIDLAL 243
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
L M + + FN +++ L R +VA +++ + + N LI L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C G S A ++ + + PNV TF+ L+ ++G + EA + E+M + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
+ +N+LI + MV K PN+ +Y ++ G KR + +E+
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
M RG V + V++ ++ G + + +QMV
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 115/283 (40%), Gaps = 33/283 (11%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +LI + R D A L +M + + P+ TFN +++ A +++E
Sbjct: 296 YNSLINCLCNYGRWSD-ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ +++ D N+LI G C L A ++F PN++T++TL++G C+ V
Sbjct: 355 IQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
E+ E +M + G+ + V + +I V MV ++ +Y +
Sbjct: 415 EDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSIL 474
Query: 302 LYGLLDAKRFIEALEV-------------------VEGMVSRGFV-------------PS 329
L+GL + AL + +EGM G V P
Sbjct: 475 LHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPD 534
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
V++ ++ GLC R +E D R+M G +P G + ++
Sbjct: 535 VVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
T++ +L+ L + D A +++ + +E++ N +I+G+C+ G++ A +D F
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLF 526
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
++P+V T++T++ GLC K +++EA + KM++ G P+ +N LI
Sbjct: 527 CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDR 586
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
++ M GF + + V L D +
Sbjct: 587 AASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 141/314 (44%), Gaps = 8/314 (2%)
Query: 49 WLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLL 108
+++ + A +L P + + + + +K FN + L+ L + +L
Sbjct: 53 FISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAIL 112
Query: 109 HQTLKRRS--FSDDFFFTLIKLYAHVARRIDKAVETL-LSMPDFQCWPSRRTFNFVLNVL 165
HQ +K + F + F L++ ++ DK +E L + PS + LN+L
Sbjct: 113 HQ-MKYETCRFQESLFLNLMRHFSRSDLH-DKVMEMFNLIQVIARVKPSLNAISTCLNLL 170
Query: 166 VANRLYDVAGEVY-EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLE-P 223
+ + +++ ++ A L ++ + C NIL+K C+ G+++ A V +E +SG+ P
Sbjct: 171 IDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYP 230
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXV 282
N T+STLM L +EA E E M K G+ PD V FNV+I +
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 283 LDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
LD M + G PNV +Y ++ G + EA + + + G V + L+ CR
Sbjct: 291 LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCR 350
Query: 343 HRRTEEVDWALRQM 356
+ T+E L +M
Sbjct: 351 NGETDEAMKLLGEM 364
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 16/260 (6%)
Query: 128 LYAHVARRIDKAVETLLSMPDFQ-CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLA- 185
L+AH R +AVE M + P TFN ++N AGEV A L
Sbjct: 242 LFAH--SRSKEAVELFEDMISKEGISPDPVTFNVMINGFCR------AGEVERAKKILDF 293
Query: 186 VEVDACCMNI-----LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++ + C N+ L+ G C+ G++ A + FDE K+GL+ + ++TLM+ C G
Sbjct: 294 MKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGE 353
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+EA + L +M+ D + +NV++ +LD +G + N GSY+
Sbjct: 354 TDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRI 413
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
+L L +A++ + M RG P ++ +LVV LC TE L +R G
Sbjct: 414 ILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIG 473
Query: 361 FVPRMGMWRHIVNCAVSKPR 380
+P W +V ++ K R
Sbjct: 474 LIPGPKSWGAVVE-SICKER 492
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 175 GEVYEAAPRLA------VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
GE EA L D N++++GL +G A+++ D++ G+ N ++
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Query: 229 STLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
+++ LC G +E+A ++L M + G+ P +N L+ VL +R
Sbjct: 412 RIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLR 471
Query: 289 KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
G P S+ V+ + ++ + E+++ +VS
Sbjct: 472 IGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 3/292 (1%)
Query: 53 KQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTL 112
K T+L N +P V + F + +L A L + +L +
Sbjct: 42 KSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQK 101
Query: 113 KRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY 171
K R S + F +I LY A + A + MP+ C S +FN +L+ ++ +
Sbjct: 102 KYRDMSKEGFAARIISLYGK-AGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKF 160
Query: 172 DVAGEVYEAAP-RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
DV E++ P +L+++ D N LIK LC++ L AV + DE GL+P++ TF+T
Sbjct: 161 DVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNT 220
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
L+ KG E E KM + V D+ +N + + + G
Sbjct: 221 LLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASG 280
Query: 291 FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
P+V S+ ++ G ++ + EA + +V G+ P +F L+ +C+
Sbjct: 281 LKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCK 332
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 101/241 (41%), Gaps = 3/241 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSM 146
+L++ + D + L ++ + S D + TLIK + +AV L +
Sbjct: 148 NALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCE-KDSLPEAVALLDEI 206
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+ P TFN +L +++ E++ V +D N + GL + +
Sbjct: 207 ENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKS 266
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
V +F E SGL+P+V +F+ ++ G +G ++EA W +++ K G PD F +L
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ + K + + QQ++ L+ + EA E+V+ + F
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDF 386
Query: 327 V 327
+
Sbjct: 387 L 387
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ ++A++ M + + PS F +LNV+ + +DV + + + V D N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+L+ CQ + A + K G EP++ TF++L++G C +EEA + +M +
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PDVV++ +I + D M G P+V Y ++ GL ++ R+ +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++ GM R P ++F L+ + + + + +M+R P + + ++N
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 99/210 (47%), Gaps = 2/210 (0%)
Query: 153 PSRRTFNFVLNVL-VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
P TF ++N + NR+ + V + + ++ D +I LC+ G ++ A+
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMV-EMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
+FD+ G+ P+V +++L++GLC G +A L M K + PDV+ FN LI
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+ + M+R PN+ +Y ++ G EA ++ M ++G P V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
++ L+ G C+ ++ ++ +M ++G
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGL 348
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 126/295 (42%), Gaps = 5/295 (1%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
F P TSLI N ++ ++++Q ++ D +T I ++ A+
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
M ++ P + ++N L + + A + + ++ D N LI
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
++G+ A ++++E + + PN+ T+++L++G C +G V+EA + ME G PDV
Sbjct: 258 VKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDV 317
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V + LI + M +KG N +Y ++ G + A EV
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ---GFVPRMGMWRHIV 372
MVSRG P+ ++ L+ LC + + ++ M ++ G P +W + V
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPN--IWTYNV 430
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+D+A + M C+P + ++N + D A +++ + + +
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA---FEWLEKME 252
LI+G Q G+ + A +VF G+ PN+RT++ L+H LC G V++A FE ++K E
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
GV P++ +NVL+ V + M ++ + +Y ++ G+ A +
Sbjct: 418 MDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK 477
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
A+ + + S+G P+ V++ ++ GL R E R+M G
Sbjct: 478 NAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 95/217 (43%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
T N ++N + +A +L E D LI G C + A+ + ++
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQM 168
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
+ G++P+V ++T++ LC+ G V A ++ME G+ PDVV++ L+
Sbjct: 169 VEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRW 228
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
+L M ++ P+V ++ ++ + +F++A E+ M+ P+ ++ L
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSL 288
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ G C +E M +G P + + ++N
Sbjct: 289 INGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLIN 325
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A L M + P TFN +++ V + A E+Y R+++ + LI
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
G C +G + A ++F G P+V +++L++G C+ V++A + +M + G+
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+ + + LI V MV +G PN+ +Y +L+ L + +AL +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 319 EGMVSR---GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
E M R G P+ ++ L+ GLC + + E+ M ++
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ + + + + + D G+ ++ T + LM+ C+ A +L KM K G
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD+V F LI +++ MV G P+V Y ++ L AL
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
+ + M + G P V + LV GLC R + D LR M ++ P + + +++
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAF 257
Query: 376 VSKPR 380
V + +
Sbjct: 258 VKEGK 262
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 60/104 (57%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ T+N +L+ L N + A V+E + +++ I+I+G+C+ G++ AV +
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
F P G++PNV T++T++ GL +G+ EA KM++ GV
Sbjct: 483 FCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 109/215 (50%), Gaps = 11/215 (5%)
Query: 160 FVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS 219
F L+ + + +Y VAG++ ++ ++ D ILI LC+ + A++V
Sbjct: 23 FCLSNSIKDAVY-VAGQM----EKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 77
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
G+ PNV T+S+L+ GLC+ G + +A L +M+ + P+V+ F+ LI
Sbjct: 78 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 137
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
V MM++ PNV +Y ++YGL R EA+++++ M+S+G P+ V++ L G
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 197
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ R ++ L M P+ G+ + V+C
Sbjct: 198 FFKSSRVDDGIKLLDDM------PQRGVAANTVSC 226
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 91/206 (44%)
Query: 160 FVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS 219
+++ L NRL A EV + + + + LI GLC+ G L+ A + E
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
+ PNV TFS L+ ++G + + + M + + P+V ++ LI
Sbjct: 113 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEA 172
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
+LD+M+ KG PNV +Y + G + R + +++++ M RG + VS L+ G
Sbjct: 173 IKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKG 232
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRM 365
+ + + M G +P +
Sbjct: 233 YFQAGKIDLALGVFGYMTSNGLIPNI 258
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+L +E D + L+ G C + AV V + K G++ +V + L+ LC+ +V
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
A E L++M+ G+ P+VV ++ LI L M K PNV ++ ++
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+ + V + M+ P+ ++ L+ GLC H R +E L M+ +G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 363 PRMGMWRHIVN 373
P + + + N
Sbjct: 186 PNVVTYSTLAN 196
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 4/256 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSM 146
T LI L L+ P +L + +K R S + + +LI R D A L M
Sbjct: 52 TILIDTLCKNRLVVPALEVLKR-MKDRGISPNVVTYSSLITGLCKSGRLAD-AERRLHEM 109
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+ P+ TF+ +++ VY+ +++++ + + LI GLC +
Sbjct: 110 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 169
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
A+K+ D G PNV T+STL +G + V++ + L+ M + GV + V N L
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I V M G PN+ SY VL GL +AL E M
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 327 VPSFVSFKQLVVGLCR 342
+++ ++ G+C+
Sbjct: 290 DLDIITYTIMIHGMCK 305
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 2/212 (0%)
Query: 56 TTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR 115
T LC S + A LH ++K NP ++LI A L + ++ ++
Sbjct: 91 TGLCKS-GRLADAERRLHEMDSKK-INPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 148
Query: 116 SFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAG 175
+ F ++ + + R+D+A++ L M C P+ T++ + N + D
Sbjct: 149 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 208
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
++ + P+ V + N LIKG Q G++ A+ VF +GL PN+R+++ ++ GL
Sbjct: 209 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 268
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
G VE+A E M+K D++ + ++I
Sbjct: 269 FANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F TLIK + ++ +AV + M + C P T+N ++N + + +A ++
Sbjct: 161 FNTLIK-GLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM 219
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
V+ D + +I LC+ G + AA+ +F E G++ +V T+++L+ GLC+ G
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ L+ M + P+V+ FNVL+ + M+ +G PN+ +Y +
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ G R EA +++ MV P V+F L+ G C +R ++ R + ++G
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 362 VP 363
V
Sbjct: 400 VA 401
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 4/203 (1%)
Query: 171 YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
Y V G+V +L E D N LIKGL +G++S AV + D ++G +P+V T+++
Sbjct: 143 YSVLGKVM----KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
+++G+C G A + L KME+ V DV ++ +I + M KG
Sbjct: 199 IVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKG 258
Query: 291 FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
+V +Y ++ GL A ++ + +++ MVSR VP+ ++F L+ + + +E +
Sbjct: 259 IKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEAN 318
Query: 351 WALRQMVRQGFVPRMGMWRHIVN 373
++M+ +G P + + +++
Sbjct: 319 ELYKEMITRGISPNIITYNTLMD 341
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 108/225 (48%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A++ L M + T++ +++ L + D A +++ ++ N L++
Sbjct: 212 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 271
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
GLC+ G+ + + + + PNV TF+ L+ ++G ++EA E ++M G+ P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+++ +N L+ +LD+MVR P++ ++ ++ G KR + ++V
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ RG V + V++ LV G C+ + + + ++MV G +P
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLP 436
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM------NILIKGLCQQGEL 206
P TFN ++ L + G+V EA + V+ C N ++ G+C+ G+
Sbjct: 156 PDTTTFNTLIKGLF------LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDT 209
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
S A+ + + + ++ +V T+ST++ LC G ++ A ++ME G+ VV +N L
Sbjct: 210 SLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ +L MV + PNV ++ +L + + EA E+ + M++RG
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
P+ +++ L+ G C R E + L MVR P + + ++
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
L M + P+ TFN +L+V V A E+Y+ + + N L+ G C
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
Q LS A + D ++ P++ TF++L+ G C V++ + + K G+ + V
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 263 FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMV 322
+++L+ + MV G P+V +Y +L GL D + +ALE+ E +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
V + ++ G+C+ + E+ W L
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDA-WNL 495
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 1/248 (0%)
Query: 63 NHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFF 122
N S A +L L R +P TSLI +D + KR ++
Sbjct: 347 NRLSEANNMLDLM-VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
++++ + +I A E M P T+ +L+ L N + A E++E
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+ +++ +I+G+C+ G++ A +F P G++PNV T++ ++ GLC+KG +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA L KME+ G P+ +N LI +++ M GF + S + V+
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 303 YGLLDAKR 310
LL A +
Sbjct: 586 DMLLSAMK 593
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 113/249 (45%), Gaps = 2/249 (0%)
Query: 90 SLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPD 148
+L+ N L + +L ++ + D FT LIK Y V +R+D ++ ++
Sbjct: 338 TLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV-KRVDDGMKVFRNISK 396
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
+ T++ ++ + +A E+++ V D IL+ GLC G+L
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+++F++ KS ++ + ++T++ G+C+ G VE+A+ + GV P+V+ + V+I
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+L M G PN +Y ++ L + +++E M S GF
Sbjct: 517 GLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSA 576
Query: 329 SFVSFKQLV 337
S K ++
Sbjct: 577 DASSIKMVI 585
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 94/212 (44%), Gaps = 2/212 (0%)
Query: 153 PSRRTFNFVLN-VLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
P+ T+N +++ + NRL + A + + R D LIKG C + +K
Sbjct: 331 PNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
VF K GL N T+S L+ G C+ G ++ A E ++M GV PDV+ + +L+
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+ + + + + Y ++ G+ + +A + + +G P+ +
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++ ++ GLC+ E + LR+M G P
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 103/236 (43%), Gaps = 13/236 (5%)
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
F + FN VL+ L +A +Y +NI+I C+ +
Sbjct: 95 FSAIARTKQFNLVLDFCKQLELNGIAHNIYT-------------LNIMINCFCRCCKTCF 141
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A V + K G EP+ TF+TL+ GL +G V EA +++M + G PDVV +N ++
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+L M + +V +Y ++ L A+ + + M ++G
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
S V++ LV GLC+ + + L+ MV + VP + + +++ V + + E+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%)
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+ +F E +S P++ FS + ++ +++E G+ ++ N++I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
VL +++ G+ P+ ++ ++ GL + EA+ +V+ MV G P
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQM 356
V++ +V G+CR T LR+M
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKM 219
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A EV + P+ +E D L+ LC+ G + A KVF++ + PN+R F++L++
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLY 244
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
G C +G + EA E L +M++ G+ PD+VVF L+ +++ M ++GF P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 294 NVGSYQQVLYGLLDA-KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
NV Y ++ L KR EA+ V M G V++ L+ G C+ ++
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSV 364
Query: 353 LRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE--GCN 397
L M ++G +P + I+ A K +E C+ L E ++ GC+
Sbjct: 365 LDDMRKKGVMPSQVTYMQIM-VAHEKKEQFEE-CLELIEKMKRRGCH 409
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 137/350 (39%), Gaps = 51/350 (14%)
Query: 88 CTSLITKLAHANLLDPIHTLLHQTLKRRS--FSDDFFFTLIKLYAHVARRIDKAVETLLS 145
C S++ L+ + L+ + K + F L++ +A A + KAVE L
Sbjct: 134 CKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFAS-ANMVKKAVEVLDE 192
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA-----PRL---------------- 184
MP + P F +L+ L N A +V+E P L
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKL 252
Query: 185 -------------AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTL 231
+E D L+ G G+++ A + ++ K G EPNV ++ L
Sbjct: 253 MEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVL 312
Query: 232 MHGLC--EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK 289
+ LC EK M +EA +ME+ G D+V + LI VLD M +K
Sbjct: 313 IQALCRTEKRM-DEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 290 GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
G P+ +Y Q++ ++F E LE++E M RG P + + ++ C+ +E
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 350 DWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGCNHL 399
+M G P + + ++N S+ ++E CNH
Sbjct: 432 VRLWNEMEANGLSPGVDTFVIMINGFTSQGF-----------LIEACNHF 470
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 7/275 (2%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARR 135
R+ F P + TSL+ L +L Q +K D F L+ YAH +
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQ-MKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCMN 194
D A + + M P+ + ++ L + D A V+ R E D
Sbjct: 288 AD-AYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C+ G + V D+ K G+ P+ T+ +M +K EE E +EKM++
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD++++NV+I + + M G P V ++ ++ G IEA
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 315 LEVVEGMVSRGF--VPSFVSFKQLVVGLCRHRRTE 347
+ MVSRG P + + K L+ L R + E
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 6/336 (1%)
Query: 61 SLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDD 120
++N SA++LL T + P +LI L+ N ++ LL + D
Sbjct: 229 AVNEIDSALSLLRDMT-KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287
Query: 121 FFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F + L RI++A + + M P T+ +++N L D A +++
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS-GLEPNVRTFSTLMHGLCEKG 239
P+ + + N LI G G L A V + S G+ P+V T+++L++G ++G
Sbjct: 348 IPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEG 403
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
+V A E L M G P+V + +L+ VL+ M G PN +
Sbjct: 404 LVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFN 463
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
++ R EA+E+ M +G P +F L+ GLC + W LR M+ +
Sbjct: 464 CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 360 GFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEG 395
G V + ++N + + E+ + + + +G
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 1/260 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ID+A L M P+ FN +++ A E++ PR + D N
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFN 498
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI GLC+ E+ A+ + + G+ N T++TL++ +G ++EA + + +M
Sbjct: 499 SLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQ 558
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G D + +N LI + + M+R G P+ S ++ GL + EA
Sbjct: 559 GSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+E + MV RG P V+F L+ GLCR R E+ R++ +G P + +++
Sbjct: 619 VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSW 678
Query: 375 AVSKPRNYESTCVSLDEILE 394
Y++ C+ LDE +E
Sbjct: 679 LCKGGFVYDA-CLLLDEGIE 697
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 120/282 (42%), Gaps = 5/282 (1%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVET 142
PT ++ L N + + L R+ F F ++ ID A+
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
L M C P+ + +++ L + A ++ E + DA N +I GLC+
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
++ A K+ + G P+ T+ LM+GLC+ G V+ A + ++ K P++V+
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355
Query: 263 FNVLIXXXXXXXXXXXXXXVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM 321
FN LI VL DM+ G P+V +Y ++YG ALEV+ M
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 322 VSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++G P+ S+ LV G C+ + +E L +M G P
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 116/286 (40%), Gaps = 5/286 (1%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDK 138
+ F P + L+ L +D L ++ K F TLI + R+D
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIV---IFNTLIHGFV-THGRLDD 371
Query: 139 AVETLLSM-PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A L M + P T+N ++ L +A EV + + IL+
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G C+ G++ A V +E GL+PN F+ L+ C++ + EA E +M + G
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
PDV FN LI +L M+ +G N +Y ++ L EA ++
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
V MV +G +++ L+ GLCR ++ +M+R G P
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 10/239 (4%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVL-----VANRLYDVAGEVYEAAPRLAVEVD 189
RI +AVE MP C P TFN +++ L + + L+ + + E V +
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG-----VVAN 528
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
N LI ++GE+ A K+ +E G + T+++L+ GLC G V++A E
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
KM + G P + N+LI MV +G P++ ++ ++ GL A
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
R + L + + + G P V+F L+ LC+ + L + + GFVP W
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 104/244 (42%), Gaps = 9/244 (3%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRI 136
RK P SLI+ L + + LL + ++ + TLI A + R
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN--AFLRRGE 544
Query: 137 DKAVETLLSMPDFQCWP-SRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
K L++ FQ P T+N ++ L D A ++E R NI
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI GLC+ G + AV+ E G P++ TF++L++GLC G +E+ K++ G
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG 664
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL-----LDAKR 310
+ PD V FN L+ +LD + GF PN ++ +L + LD +R
Sbjct: 665 IPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
Query: 311 FIEA 314
F A
Sbjct: 725 FYNA 728
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 123/334 (36%), Gaps = 77/334 (23%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLH 109
+TP Q L + S+++ L ++ + + LI KL I LL
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 110 QTLKRRS--FSDDFFFTLIKLYAHVARRIDKAVETLLSMPD-FQCWPSRRTFNFVLNVLV 166
Q +K F + F ++++ Y A + +L M + + C P+ +++N VL +LV
Sbjct: 136 Q-MKDEGIVFKESLFISIMRDYDK-AGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 193
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
+ + VA VF + + P +
Sbjct: 194 SGNCHKVAA-----------------------------------NVFYDMLSRKIPPTLF 218
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
TF +M C ++ A L M K G P+ V+
Sbjct: 219 TFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI------------------------ 254
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
YQ +++ L R EAL+++E M G VP +F +++GLC+ R
Sbjct: 255 -----------YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 347 EEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSK 378
E + +M+ +GF P + +++N C + +
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 138/310 (44%), Gaps = 4/310 (1%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLH 109
L+PK L S +P +A L T + + ++ +L+ +++ + ++
Sbjct: 8 LSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVE 67
Query: 110 QTLKRRSFSD-DFFFTLIKLYAHVARRIDKAVETLLSMPD-FQCWPSRRTFNFVLNVLVA 167
+ D D ++IK Y + D+A++ M + F C P+ R++N +LN V
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMP-DQALDVFKRMREIFGCEPAIRSYNTLLNAFVE 126
Query: 168 NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
+ + ++ V + N+LIK C++ E A D K G +P+V +
Sbjct: 127 AKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFS 186
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
+ST+++ L + G +++A E ++M + GV PDV +N+LI + D ++
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 288 R-KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
YPNV ++ ++ GL R + L++ E M ++ L+ GLC
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 347 EEVDWALRQM 356
++ + ++
Sbjct: 307 DKAESVFNEL 316
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 149/325 (45%), Gaps = 23/325 (7%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMP 147
+SLI L A +D ++ ++ +R++ D + T++ + + I +++E L +
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGK-IKESLE-LWRIM 351
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
+ + + ++N ++ L+ N D A ++ P D I I GLC G ++
Sbjct: 352 EHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVN 411
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A+ V E SG +V +++++ LC+K +EEA +++M K GV + V N LI
Sbjct: 412 KALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
L M + G P V SY ++ GL A +F EA V+ M+ G+
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALR---QMVRQGFVPRMGMWRHIVN--CAVSK---- 378
P ++ L+ GLCR R+ +D AL Q ++ G + M +++ C+V K
Sbjct: 532 PDLKTYSILLCGLCRDRK---IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDA 588
Query: 379 --------PRNYESTCVSLDEILEG 395
RN + V+ + ++EG
Sbjct: 589 MTVMANMEHRNCTANLVTYNTLMEG 613
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 119/254 (46%), Gaps = 2/254 (0%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA-PRLAVEVDAC 191
A ++D A+E M + P +N +++ + + + A E+++ +V +
Sbjct: 197 AGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVK 256
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
NI+I GL + G + +K+++ ++ E ++ T+S+L+HGLC+ G V++A ++
Sbjct: 257 THNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL 316
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
++ DVV +N ++ + +M K N+ SY ++ GLL+ +
Sbjct: 317 DERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKI 375
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
EA + M ++G+ ++ + GLC + + ++++ G + + I
Sbjct: 376 DEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASI 435
Query: 372 VNCAVSKPRNYEST 385
++C K R E++
Sbjct: 436 IDCLCKKKRLEEAS 449
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
NILI GLC+ G+ A E ++G +P+++T+S L+ GLC ++ A E + +
Sbjct: 503 NILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ DV++ N+LI V+ M + N+ +Y ++ G
Sbjct: 563 SGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNR 622
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A + M G P +S+ ++ GLC R G P + W +V
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVR 682
Query: 374 CAVSK 378
V++
Sbjct: 683 AVVNR 687
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 132/353 (37%), Gaps = 38/353 (10%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRID 137
++ F P +++I LA A LD L + + R + D I + + +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDE-MSERGVAPDVTCYNILIDGFLKEKDH 235
Query: 138 KAVETLLS--MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
K L + D +P+ +T N +++ L D +++E + E D +
Sbjct: 236 KTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSS 295
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC------------------- 236
LI GLC G + A VF+E + +V T++T++ G C
Sbjct: 296 LIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN 355
Query: 237 ---------------EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
E G ++EA M G D + + I
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
V+ + G + +V +Y ++ L KR EA +V+ M G + L+ GL
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
R R E + LR+M + G P + + +I+ C + K + + E+LE
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSY-NILICGLCKAGKFGEASAFVKEMLE 527
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P +T++ +L L +R D+A E++ + +E D NILI GLC G+L A+ V
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
N+ T++TLM G + G A M K G+ PD++ +N ++
Sbjct: 592 MANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCM 651
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
D G +P V ++
Sbjct: 652 CRGVSYAMEFFDDARNHGIFPTVYTWN 678
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 162 LNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
LN+ A +++DV + AP ++ +ILI GLC+ G L A + D+ + G
Sbjct: 244 LNLRDALKVFDVMSKEVTCAP------NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGC 297
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
+P+ RT++ L+ LC++G++++AF ++M G P+V + VLI
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANG 357
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
V MV+ +P+V +Y ++ G R + A E++ M R P+ +F +L+ GLC
Sbjct: 358 VCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
R + + L++M+ G P + + +++
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLID 449
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+LIK LC +G + A +FDE G +PNV T++ L+ GLC G +EEA KM K
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ P V+ +N LI +L +M ++ PNV ++ +++ GL + +A
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
+ +++ M+ G P VS+ L+ GLCR
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 3/225 (1%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
+ ++N L N + A ++ +D+ L+ G C+ L A+KVFD
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 218 KS-GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
K PN ++S L+HGLCE G +EEAF ++M + G P + VLI
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
+ D M+ +G PNV +Y ++ GL + EA V MV PS +++ L
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKP 379
+ G C+ R L M ++ P + + ++ C V KP
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKP 422
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 4/250 (1%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY-EAAPRLAVEVDACCM 193
R+++A M + C PS RT+ ++ L L D A ++ E PR + +
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPR-GCKPNVHTY 339
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
+LI GLC+ G++ A V + K + P+V T++ L++G C+ G V AFE L MEK
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEK 399
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
P+V FN L+ +L M+ G P++ SY ++ GL
Sbjct: 400 RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNT 459
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A +++ M P ++F ++ C+ + + L M+R+G +++
Sbjct: 460 AYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLID 519
Query: 374 --CAVSKPRN 381
C V K R+
Sbjct: 520 GVCKVGKTRD 529
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 96/226 (42%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
++ A + L SM F P TF ++N DVA R + +D
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G+C+ G+ A+ + + K + + + ++ L + V+E L K+ K G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P VV + L+ +L++M G PNV Y ++ GL R EA
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+++ M G P+ V++ +V G + + + +R MV +G+
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGY 682
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 124/317 (39%), Gaps = 49/317 (15%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMP 147
T LI L ++ + + + +K R F + LI Y R + A E L M
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV-PAFELLTVME 398
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL------AVEVDACCMNILIKGLC 201
C P+ RTFN ++ L G+ Y+A L + D N+LI GLC
Sbjct: 399 KRACKPNVRTFNELMEGLCR------VGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLC 452
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
++G ++ A K+ +EP+ TF+ +++ C++G + A +L M + G+ D V
Sbjct: 453 REGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEV 512
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRK-------------------------------- 289
LI +L+ +V+
Sbjct: 513 TGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 290 ---GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
G P+V +Y ++ GL+ + + ++E M G +P+ + ++ GLC+ R
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 347 EEVDWALRQMVRQGFVP 363
EE + L M G P
Sbjct: 633 EEAEKLLSAMQDSGVSP 649
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 129/297 (43%)
Query: 77 ARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
K P+ T LI L L+D L + + R + +T++ +I
Sbjct: 293 GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
++A M + +PS T+N ++N + A E+ + A + + N L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
++GLC+ G+ AV + +GL P++ +++ L+ GLC +G + A++ L M +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PD + F +I L +M+RKG + + ++ G+ + +AL
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++E +V + + S ++ L + + +E L ++ + G VP + + +V+
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 131/321 (40%), Gaps = 40/321 (12%)
Query: 73 HLYTARKDFNP-----TEPFC---TSLITKLAHANLLDPIHTLLHQTLKRR-SFSDDFFF 123
H+ TA K + EP C T++I D L L++ S +
Sbjct: 456 HMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 124 TLIKLYAHVARRIDK--AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
TLI V + D +ETL+ M + + + N +L++L +
Sbjct: 516 TLIDGVCKVGKTRDALFILETLVKM---RILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+L + L+ GL + G+++ + ++ + SG PNV ++ +++GLC+ G V
Sbjct: 573 NKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRV 632
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EEA + L M+ GV P+ V + V++ + MV +G+ N Y +
Sbjct: 633 EEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSL 692
Query: 302 LYGLLDAKRFI----------------------EALEVVEGMVSRGFVPSFVSFKQLVVG 339
L G + +++ I E + VVE + G + F LV
Sbjct: 693 LQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQL--GGCISGLCIF--LVTR 748
Query: 340 LCRHRRTEEVDWALRQMVRQG 360
LC+ RT+E + ++ ++ +G
Sbjct: 749 LCKEGRTDESNDLVQNVLERG 769
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 136/305 (44%), Gaps = 8/305 (2%)
Query: 92 ITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQ 150
+ +LA A + + +L + K + S + F +I LY V + A + MP+
Sbjct: 78 VRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGM-FENAQKVFDEMPERN 136
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP-RLAVEVDACCMNILIKGLCQQGELSAA 209
C + +FN +LN V ++ +D+ +++ P +L++E D N LIKGLC +G + A
Sbjct: 137 CKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEA 196
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
V + DE GL+P+ TF+ L+H KG EE + +M + V D+ +N +
Sbjct: 197 VALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLG 256
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ D + P+V ++ ++ G + + EA+ + + G P
Sbjct: 257 LAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPL 316
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSL 389
F L+ +C+ E +++ + + + + +V+ V + E+
Sbjct: 317 KFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA----- 371
Query: 390 DEILE 394
+EI+E
Sbjct: 372 EEIVE 376
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
T L + F+ N +LN LV + A ++++ R D NILI+GLC
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC-PDV 260
G+ A+++ G EP++ T++TL+ G C+ + +A E + ++ VC PDV
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V + +I +LD M+R G YP ++ ++ G A + A E+
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
M+S G P V+F L+ G CR + + +M +G P + ++N ++ R
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 8/252 (3%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
TL+KL R++ A++ FQ +TFN ++ L + A E+
Sbjct: 180 TLVKL-----DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG--LEPNVRTFSTLMHGLCEKGMV 241
E D N LI+G C+ EL+ A ++F + KSG P+V T+++++ G C+ G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA L+ M + G+ P V FNVL+ + M+ G +P+V ++ +
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ G + + + E M +RG P+ ++ L+ LC R + L Q+ +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 362 VPRMGMWRHIVN 373
+P+ M+ +++
Sbjct: 414 IPQPFMYNPVID 425
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 127/322 (39%), Gaps = 36/322 (11%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
SL+ L + ++ L + L+ +S +D F ++ + +KA+E L M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 149 FQCWPSRRTFNFVLNVLV-ANRL-----------------------------YDVAGEVY 178
F C P T+N ++ +N L Y AG++
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 179 EAAP------RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
EA+ RL + N+L+ G + GE+ A ++ + G P+V TF++L+
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
G C G V + F E+M G+ P+ +++LI +L + K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 293 PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
P Y V+ G A + EA +VE M + P ++F L++G C R E
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 353 LRQMVRQGFVPRMGMWRHIVNC 374
+MV G P +++C
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSC 496
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 4/274 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSM 146
+LI +N L+ + S D + ++I Y A ++ +A L M
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK-AGKMREASSLLDDM 303
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+P+ TFN +++ A E+ D LI G C+ G++
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
S ++++E G+ PN T+S L++ LC + + +A E L ++ + P ++N +
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I +++ M +K P+ ++ ++ G R EA+ + MV+ G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC 483
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
P ++ L+ L + +E + L Q+ R+G
Sbjct: 484 SPDKITVSSLLSCLLKAGMAKEA-YHLNQIARKG 516
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 1/240 (0%)
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
T L + F+ N +LN LV + A ++++ R D NILI+GLC
Sbjct: 158 TALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLC 217
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC-PDV 260
G+ A+++ G EP++ T++TL+ G C+ + +A E + ++ VC PDV
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V + +I +LD M+R G YP ++ ++ G A + A E+
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
M+S G P V+F L+ G CR + + +M +G P + ++N ++ R
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 116/252 (46%), Gaps = 8/252 (3%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
TL+KL R++ A++ FQ +TFN ++ L + A E+
Sbjct: 180 TLVKL-----DRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG--LEPNVRTFSTLMHGLCEKGMV 241
E D N LI+G C+ EL+ A ++F + KSG P+V T+++++ G C+ G +
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKM 293
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA L+ M + G+ P V FNVL+ + M+ G +P+V ++ +
Sbjct: 294 REASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSL 353
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ G + + + E M +RG P+ ++ L+ LC R + L Q+ +
Sbjct: 354 IDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDI 413
Query: 362 VPRMGMWRHIVN 373
+P+ M+ +++
Sbjct: 414 IPQPFMYNPVID 425
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 127/322 (39%), Gaps = 36/322 (11%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
SL+ L + ++ L + L+ +S +D F ++ + +KA+E L M
Sbjct: 175 NSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 149 FQCWPSRRTFNFVLNVLV-ANRL-----------------------------YDVAGEVY 178
F C P T+N ++ +N L Y AG++
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMR 294
Query: 179 EAAP------RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
EA+ RL + N+L+ G + GE+ A ++ + G P+V TF++L+
Sbjct: 295 EASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLI 354
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
G C G V + F E+M G+ P+ +++LI +L + K
Sbjct: 355 DGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Query: 293 PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
P Y V+ G A + EA +VE M + P ++F L++G C R E
Sbjct: 415 PQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSI 474
Query: 353 LRQMVRQGFVPRMGMWRHIVNC 374
+MV G P +++C
Sbjct: 475 FHKMVAIGCSPDKITVSSLLSC 496
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 4/274 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSM 146
+LI +N L+ + S D + ++I Y A ++ +A L M
Sbjct: 245 NTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCK-AGKMREASSLLDDM 303
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+P+ TFN +++ A E+ D LI G C+ G++
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
S ++++E G+ PN T+S L++ LC + + +A E L ++ + P ++N +
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I +++ M +K P+ ++ ++ G R EA+ + MV+ G
Sbjct: 424 IDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGC 483
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
P ++ L+ L + +E + L Q+ R+G
Sbjct: 484 SPDKITVSSLLSCLLKAGMAKEA-YHLNQIARKG 516
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
Query: 129 YAHVARRIDKAVETLLSMPDFQCWPSRRT------FNFVLNVLVANRLYDVAGEVYEAAP 182
Y V R+ K+ + L++ F+ R ++ V++ L + +D A ++
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
++ D + LI GLC G+ K+ E + P+V TFS L+ ++G +
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA E +M G+ PD + +N LI + D+MV KG P++ +Y ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
AKR + + + + S+G +P+ +++ LV+G C+ + ++MV +G
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452
Query: 363 P 363
P
Sbjct: 453 P 453
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 2/276 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMP 147
+SLI L + D +L + + R D F+ LI ++ + ++ A E M
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMI 342
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
P T+N +++ A ++++ E D +ILI C+ +
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
+++F E GL PN T++TL+ G C+ G + A E ++M GV P VV + +L+
Sbjct: 403 DGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+ + M + +G Y +++G+ +A + +A + + +G
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P V++ ++ GLC+ E D R+M G P
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTP 558
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 35/246 (14%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+ +A+ + M ++ P T+ VLN L + +A +++ ++ +
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYS 249
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I LC+ G A+ +F+E G++ +V T+S+L+ GLC G ++ + L +M
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ PDVV F+ LI D+ V++G + +EA
Sbjct: 310 NIIPDVVTFSALI----------------DVFVKEG-------------------KLLEA 334
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
E+ M++RG P +++ L+ G C+ E + MV +G P + + ++N
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 375 AVSKPR 380
R
Sbjct: 395 YCKAKR 400
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%)
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
A +L E D + L+ G C +G +S AV + D + P++ T STL++GLC KG
Sbjct: 131 AWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR 190
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
V EA +++M + G PD V + ++ + M + +V Y
Sbjct: 191 VSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI 250
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V+ L F +AL + M +G V++ L+ GLC + ++ LR+M+ +
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 361 FVPRMGMWRHIVNCAVSKPRNYES 384
+P + + +++ V + + E+
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEA 334
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 2/205 (0%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D + LI ++G+L A ++++E G+ P+ T+++L+ G C++ + EA +
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+ M G PD+V +++LI + + KG PN +Y ++ G +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
+ A E+ + MVSRG PS V++ L+ GLC + + +M + +G++
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 369 RHIVN--CAVSKPRNYESTCVSLDE 391
I++ C SK + S SL +
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSD 518
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+++ A E M PS T+ +L+ L N + A E++E + + + N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I G+C ++ A +F G++P+V T++ ++ GLC+KG + EA KM++
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD---AKRF 311
G PD +N+LI +++ M GF + + + V+ L D K F
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSF 614
Query: 312 IEAL 315
++ L
Sbjct: 615 LDML 618
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 140/345 (40%), Gaps = 40/345 (11%)
Query: 56 TTLCNSLNHPSSAVTLLHLYTA--RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
T L N L + ++ A R +P C +L+ L HA +D + ++ + +K
Sbjct: 153 TILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIK 212
Query: 114 --RRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY 171
R S + LI + A RI+KA M C P T+N +LN N +
Sbjct: 213 SARVKLSTVVYNALISGFCK-AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNML 271
Query: 172 DVAGEVYEAAPRLAVEVDA----------C-------CMNILIKGL-------------- 200
A V R +++DA C C N ++K +
Sbjct: 272 KRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTL 331
Query: 201 ----CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
C+ A ++F+E + G+ NV T+++L+ +G A + L++M + G+
Sbjct: 332 IETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGL 391
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PD + + ++ V + M+ P+ SY ++ GL + R EA++
Sbjct: 392 SPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIK 451
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ E M + P ++FK ++ GL R ++ QM+ +GF
Sbjct: 452 LFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 89/213 (41%), Gaps = 3/213 (1%)
Query: 165 LVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPN 224
LV + + D A +V++ + V + N I L ++ A ++ + G
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 225 VRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLD 284
T+S + GLC+ + L ME G PD+ FNV +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 285 MMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHR 344
MV++G P+V SY ++ GL A + +A+E+ M+ G P + LVVGLC R
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 345 RTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVS 377
+ VD A + + R+ + + N +S
Sbjct: 199 K---VDLAYEMVAEEIKSARVKLSTVVYNALIS 228
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 8/224 (3%)
Query: 140 VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKG 199
+ETL +PD W FN L++L A + + + E D ILI G
Sbjct: 105 METLGFIPDI--WA----FNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILING 158
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL-EKMEKCGVCP 258
L + G+++ AV++++ +SG+ P+ + + L+ GLC V+ A+E + E+++ V
Sbjct: 159 LFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL 218
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
VV+N LI + M + G P++ +Y +L D A V+
Sbjct: 219 STVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVM 278
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEE-VDWALRQMVRQGF 361
MV G S+ QL+ CR ++ ++ +++M +GF
Sbjct: 279 AEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 15/299 (5%)
Query: 74 LYTARKDFNPTEPFCTSL---ITKLAHANLLDPIHTLLHQTLKRRSFSD--DFFFTLIKL 128
LY R D + F L H +L + ++H ++ SD +I+
Sbjct: 85 LYRCRNDLTLGQRFVDQLGFHFPNFKHTSL--SLSAMIHILVRSGRLSDAQSCLLRMIRR 142
Query: 129 YAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA--APRLAV 186
I ++++ S C + F+ ++ V R A E + + V
Sbjct: 143 SGVSRLEIVNSLDSTFS----NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTV 198
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
+DAC N LI L + G + A V+ E +SG+ NV T + +++ LC+ G +E+
Sbjct: 199 SIDAC--NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT 256
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
+L ++++ GV PD+V +N LI +++ M KGF P V +Y V+ GL
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
++ A EV M+ G P +++ L++ C+ E + M + VP +
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDL 375
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 5/258 (1%)
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVE--TLLSMPDFQCWPSRRTFNFVLNVL 165
L T +D F LI+ Y AR++ +A E TLL F S N ++ L
Sbjct: 154 LDSTFSNCGSNDSVFDLLIRTYVQ-ARKLREAHEAFTLLRSKGFTV--SIDACNALIGSL 210
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
V ++A VY+ R V ++ +NI++ LC+ G++ + + G+ P++
Sbjct: 211 VRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDI 270
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
T++TL+ KG++EEAFE + M G P V +N +I V
Sbjct: 271 VTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAE 330
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
M+R G P+ +Y+ +L +E +V M SR VP V F ++ R
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 346 TEEVDWALRQMVRQGFVP 363
++ + G +P
Sbjct: 391 LDKALMYFNSVKEAGLIP 408
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 108/223 (48%), Gaps = 3/223 (1%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A E+++ + +D N L+ G + G++ A +++ + + P ++S L++
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
LC KG + EAF ++M + P V++ N +I L+ M+ +GF P
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSR--GFVPSFVSFKQLVVGLCRHRRTEEVDW 351
+ SY ++YG + + +A +V+ M G VP ++ ++ G CR + +E +
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 352 ALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
LR+M+ +G P + ++N VS+ E+ + DE+L+
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIH-DEMLQ 720
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMPDF 149
++ L ++ + T L Q ++ + D + TLI Y+ +++A E + +MP
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL-MEEAFELMNAMPGK 299
Query: 150 QCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
P T+N V+N L + Y+ A EV+ R + D+ L+ C++G++
Sbjct: 300 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 359
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
KVF + + P++ FS++M G +++A + +++ G+ PD V++ +LI
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ + M+++G +V +Y +L+GL K EA ++ M R P
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 479
Query: 330 FVSFKQLVVGLCR 342
+ L+ G C+
Sbjct: 480 SYTLTILIDGHCK 492
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 107/242 (44%), Gaps = 1/242 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F +++ L+ + +DKA+ S+ + P + ++ + VA +
Sbjct: 378 FSSMMSLFTR-SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ +D N ++ GLC++ L A K+F+E + L P+ T + L+ G C+ G +
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNL 496
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ A E +KM++ + DVV +N L+ + MV K P SY +
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ L EA V + M+S+ P+ + ++ G CR + + L +M+ +GF
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 362 VP 363
VP
Sbjct: 617 VP 618
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 117/278 (42%), Gaps = 4/278 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVA-RRIDKAVETLLSMP 147
+++ L +L L ++ +R F D + T++ + H + A+E M
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTIL-IDGHCKLGNLQNAMELFQKMK 507
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
+ + T+N +L+ D A E++ + +IL+ LC +G L+
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A +V+DE ++P V ++++ G C G + +LEKM G PD + +N LI
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 268 XXXXXXXXXXXXXXVLDMMVRK--GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
++ M + G P+V +Y +L+G + EA V+ M+ RG
Sbjct: 628 YGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERG 687
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P ++ ++ G E +M+++GF P
Sbjct: 688 VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 108/243 (44%), Gaps = 2/243 (0%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
T+N +L+ L ++ A +++ A+ D+ + ILI G C+ G L A+++F +
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
+ + +V T++TL+ G + G ++ A E M + P + +++L+
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
V D M+ K P V ++ G + + +E M+S GFVP +S+ L
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 337 VVGLCRHRRTEEVDWALRQMVRQ--GFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
+ G R + +++M + G VP + + I++ + + E+ V I
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 395 GCN 397
G N
Sbjct: 687 GVN 689
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 149 FQCWPSRRTFNFVLNVLVANRL---YDVAGEVYEAAPRLAVEV------DACCMNILIKG 199
F+ W + N V++ N + Y +G + L + D N LI G
Sbjct: 570 FRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYG 629
Query: 200 LCQQGELSAA---VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
++ +S A VK +E + GL P+V T+++++HG C + ++EA L KM + GV
Sbjct: 630 FVREENMSKAFGLVKKMEE-EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPN 294
PD + +I + D M+++GF P+
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 98/197 (49%), Gaps = 3/197 (1%)
Query: 156 RTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE 215
R FN ++ L+ + ++++ ++ + N L+ L ++G A +FDE
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 216 FPKS-GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
++ G+ P+ TF+TL++G C+ MV+EAF + ME PDVV +N +I
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 275 XXXXXXXVLDMMVRKG--FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
VL M++K +PNV SY ++ G + EA+ V M+SRG P+ V+
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVT 318
Query: 333 FKQLVVGLCRHRRTEEV 349
+ L+ GL R +E+
Sbjct: 319 YNTLIKGLSEAHRYDEI 335
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 131/321 (40%), Gaps = 20/321 (6%)
Query: 82 NPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF------FFTLIKLYAHVARR 135
NP ++I L A + H +L LK+ + D + TL++ Y + +
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKK---ATDVHPNVVSYTTLVRGYC-MKQE 296
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV--DACCM 193
ID+AV M P+ T+N ++ L YD ++ DAC
Sbjct: 297 IDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTF 356
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG-------MVEEAFE 246
NILIK C G L AA+KVF E L P+ ++S L+ LC + + E FE
Sbjct: 357 NILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFE 416
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
+ K P +N + V ++++G + SY+ ++ G
Sbjct: 417 KEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGV-QDPPSYKTLITGHC 475
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMG 366
+F A E++ M+ R FVP +++ L+ GL + L++M+R ++P
Sbjct: 476 REGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVAT 535
Query: 367 MWRHIVNCAVSKPRNYESTCV 387
+ ++ + ES C+
Sbjct: 536 TFHSVLAELAKRKFANESFCL 556
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 97/236 (41%), Gaps = 11/236 (4%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV--DACCM 193
+D+A M + C P T+N +++ L +A V + A +V +
Sbjct: 225 VDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSY 284
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
L++G C + E+ AV VF + GL+PN T++TL+ GL E +E + L
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGND 344
Query: 254 C--GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
PD FN+LI V M+ +P+ SY ++ L F
Sbjct: 345 AFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEF 404
Query: 312 IEALEVVEGMVSRGFV-------PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
A + + + + P ++ + LC + +T++ + RQ++++G
Sbjct: 405 DRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG 460
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 128/308 (41%), Gaps = 13/308 (4%)
Query: 68 AVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIH-TLLHQTLKRRSFSDDF--FFT 124
AV + H +R P +LI L+ A+ D I L+ +F+ D F
Sbjct: 300 AVLVFHDMLSR-GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNI 358
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVA----GEVYEA 180
LIK + A +D A++ M + + P +++ ++ L +D A E++E
Sbjct: 359 LIKAHCD-AGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 181 APRLAVEV---DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
L + A N + + LC G+ A KVF + K G++ + ++ TL+ G C
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCR 476
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
+G + A+E L M + PD+ + +LI L M+R + P +
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
+ VL L K E+ +V M+ + + Q+V L + E+ +R +
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLY 596
Query: 358 RQGFVPRM 365
G++ +M
Sbjct: 597 DNGYLVKM 604
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 145/350 (41%), Gaps = 33/350 (9%)
Query: 52 PKQATTLCNSL---NHPSSAVTLLHLYTA---RKDFNPTEPFCTSLITKLAHANLLDPIH 105
P++A ++ N+L H S +T L TA +K F+ SLI+K+ N L P
Sbjct: 335 PQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS----LLSLISKV-EKNGLKPDT 389
Query: 106 TLLHQTLKRRSFSDDF---------------------FFTLIKLYAHVARRIDKAVETLL 144
L + + S S + F TLIK Y + + + + +
Sbjct: 390 ILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDM 449
Query: 145 SMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
+ D P+ RT N ++ R + A + V+ D N L K + G
Sbjct: 450 MLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 509
Query: 205 EL-SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
+A + + ++PNVRT T+++G CE+G +EEA + +M++ GV P++ VF
Sbjct: 510 STCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVF 569
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
N LI V+D+M G P+V ++ ++ E+ M+
Sbjct: 570 NSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLE 629
Query: 324 RGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
G P +F L G R E+ + L QM + G P + ++ I++
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIIS 679
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 1/206 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++++A+ M + P+ FN ++ + D GEV + V+ D +
Sbjct: 546 KMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFS 605
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
L+ G++ +++ + + G++P++ FS L G G E+A + L +M K
Sbjct: 606 TLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKF 665
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR-KGFYPNVGSYQQVLYGLLDAKRFIE 313
GV P+VV++ +I V M G PN+ +Y+ +++G +AK+ +
Sbjct: 666 GVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWK 725
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVG 339
A E+++ M + VP+ + + + G
Sbjct: 726 AEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 5/199 (2%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ GL ++G A +F+ + G +P++ T++TL+ L + + K+EK G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ PD ++FN +I + + M G P ++ ++ G + E+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESS 444
Query: 316 EVVEGMVSRGFV-PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+++ M+ + P+ + LV C R+ EE + +M G P + + N
Sbjct: 445 RLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTF----NT 500
Query: 375 AVSKPRNYESTCVSLDEIL 393
STC + D I+
Sbjct: 501 LAKAYARIGSTCTAEDMII 519
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 110/266 (41%), Gaps = 36/266 (13%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+ ++ A E F PS +T++ ++ R A +V++ VD
Sbjct: 187 KHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAY 246
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N L+ LC+ G++ K+F E GL+P+ +F+ +H C+ G V A++ L++M++
Sbjct: 247 NALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR 306
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV------------------ 295
+ P+V FN +I +LD M++KG P+
Sbjct: 307 YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNR 366
Query: 296 -----------------GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+Y VL L+ RF A E+ EGM R F P+ ++ ++
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Query: 339 GLCRHR-RTEEVDWALRQMVRQGFVP 363
GL R + + EE M+ +G P
Sbjct: 427 GLVRKKGKLEEACRYFEMMIDEGIPP 452
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 5/256 (1%)
Query: 118 SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEV 177
S F+ + + Y+ A +A M +F P + +L+ L + + A E
Sbjct: 137 SSKVFWIVFRAYSR-ANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF 195
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
+ A + A +IL++G + + S A KVFDE + ++ ++ L+ LC+
Sbjct: 196 FGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCK 255
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
G V+ ++ ++M G+ PD F + I VLD M R PNV +
Sbjct: 256 SGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYT 315
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
+ ++ L ++ +A +++ M+ +G P ++ ++ C H L +M
Sbjct: 316 FNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMD 375
Query: 358 RQGFVPRMGMWRHIVN 373
R +P RH N
Sbjct: 376 RTKCLPD----RHTYN 387
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 107/254 (42%), Gaps = 5/254 (1%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGE-VYEAAPRLAVEVDACCMNILIKGLCQQG 204
+PDF S +++ ++ +L +++ + + + + EA E+ + I+ + +
Sbjct: 95 IPDFA--HSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRAN 152
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
S A + F+ + G++P V L+H LC+K V A E+ K + G+ P ++
Sbjct: 153 LPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYS 212
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
+L+ V D M+ + ++ +Y +L L + ++ + M +
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
G P SF + C L +M R VP + + HI+ + K +
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIK-TLCKNEKVDD 331
Query: 385 TCVSLDEILE-GCN 397
+ LDE+++ G N
Sbjct: 332 AYLLLDEMIQKGAN 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 1/181 (0%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRID 137
R D P +I L +D + LL + +++ + D + + I Y ++
Sbjct: 306 RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVN 365
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A + L M +C P R T+N VL +L+ +D A E++E ++I
Sbjct: 366 RATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMI 425
Query: 198 KGLC-QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
GL ++G+L A + F+ G+ P T L + L G ++ KME+
Sbjct: 426 HGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSSS 485
Query: 257 C 257
C
Sbjct: 486 C 486
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 38/258 (14%)
Query: 108 LHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
LH+ + +R S D + +LI + ++DKA L M C P+ RTFN ++N
Sbjct: 339 LHKEMIQRGISPDTVTYTSLIDGFCK-ENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
L D E++ V D N LI+G C+ G+L A ++F E + P++
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
++ L+ GLC+ G E+A E EK+EK + D+ ++N++I
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIII------------------ 499
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
+G+ +A + +A ++ + +G P ++ ++ GLC+
Sbjct: 500 -----------------HGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGS 542
Query: 346 TEEVDWALRQMVRQGFVP 363
E D R+M G P
Sbjct: 543 LSEADLLFRKMEEDGHSP 560
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 120/281 (42%), Gaps = 44/281 (15%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
ID+ VET FQ P+ T+ VL V+ + +A E+ +++DA +I
Sbjct: 200 IDRMVET-----GFQ--PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSI 252
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC------------------- 236
+I GLC+ G L A +F+E G + ++ ++TL+ G C
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 237 ----------------EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
++G + EA E ++M + G+ PD V + LI
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
+LD+MV KG PN+ ++ ++ G A + LE+ M RG V V++ L+ G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 341 CRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKP 379
C + E ++MV + P + ++ +++ C +P
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D AV+ M + P F+ + +V+ + YD+ ++ + + + ++I+
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I C+ +LS A + K G EP+ TFSTL++GLC +G V EA E +++M + G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
P ++ N L+ ++D MV GF PN +Y VL + + + A+E
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
++ M R V + ++ GLC+ + +M +GF
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 134/298 (44%), Gaps = 21/298 (7%)
Query: 22 HKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDF 81
HK + P+T T+++ F +++ L + NH +L L + K
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQL---------DKANH------MLDLMVS-KGC 383
Query: 82 NPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAV 140
P LI ANL+D L + R +D + TLI+ + + + ++ A
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK-LEVAK 442
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
E M + P ++ +L+ L N + A E++E + +E+D NI+I G+
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
C ++ A +F P G++P+V+T++ ++ GLC+KG + EA KME+ G P+
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA---KRFIEAL 315
+N+LI +++ + R GF + + + V+ L D K F++ L
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 108/240 (45%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R++ A + + P TF+ ++N L A E+ + + + +
Sbjct: 121 RKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N L+ GLC G++S AV + D ++G +PN T+ ++ +C+ G A E L KME+
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ D V ++++I + + M KGF ++ Y ++ G A R+ +
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+++ M+ R P V+F L+ + + E + ++M+++G P + +++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 113/239 (47%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+ +A+E + M + P+ T N ++N L N A + + + +
Sbjct: 157 RVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++K +C+ G+ + A+++ + + ++ + +S ++ GLC+ G ++ AF +ME
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G D++++ LI +L M+++ P+V ++ ++ + + EA
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
E+ + M+ RG P V++ L+ G C+ + ++ + L MV +G P + + ++N
Sbjct: 337 EELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%)
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
AV +F E +S P + FS L + + + ++ME G+ ++ +++I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+ +++ G+ P+ ++ ++ GL R EALE+V+ MV G P
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKP 175
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ ++ LV GLC + + + + +MV GF P
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 6/310 (1%)
Query: 71 LLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYA 130
L+ LY FNP+ C +++ + + + + L + LKR+ D F ++
Sbjct: 188 LMGLY----GFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVL 243
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
+K+ + M P+ T+N VL+ + A E+ + V+ D
Sbjct: 244 CAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV 303
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
C N+LI LC+ ++ + + K + PN T++TL++G +G V A + L +
Sbjct: 304 CTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNE 363
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M G+ P+ V FN LI + MM KG P+ SY +L GL
Sbjct: 364 MLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAE 423
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
F A M G +++ ++ GLC++ +E L +M + G P + +
Sbjct: 424 FDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSA 483
Query: 371 IVN--CAVSK 378
++N C V +
Sbjct: 484 LINGFCKVGR 493
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 124/284 (43%), Gaps = 2/284 (0%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMPDF 149
LI L +N + + LL KR ++ + TLI +++ + + A + L M F
Sbjct: 309 LIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVL-IASQLLNEMLSF 367
Query: 150 QCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
P+ TFN +++ ++ + A +++ + +L+ GLC+ E A
Sbjct: 368 GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
+ ++G+ T++ ++ GLC+ G ++EA L +M K G+ PD+V ++ LI
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALING 487
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
++ + R G PN Y ++Y EA+ + E M+ G
Sbjct: 488 FCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRD 547
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+F LV LC+ + E + +R M G +P + ++N
Sbjct: 548 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 9/354 (2%)
Query: 16 PPLTPHHKPRLWFCTQPNTDRDTAILARFQQK----DWLTPKQAT-TLCNSLNHPSSAVT 70
P + ++ W+C + +L + K D T LC S N +
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRS-NRIAKGYL 324
Query: 71 LLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYA 130
LL R +P E +LI ++ + LL++ L + F + +
Sbjct: 325 LLRDMRKRM-IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL-IDG 382
Query: 131 HVAR-RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVD 189
H++ +A++ M PS ++ +L+ L N +D+A Y R V V
Sbjct: 383 HISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVG 442
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
+I GLC+ G L AV + +E K G++P++ T+S L++G C+ G + A E +
Sbjct: 443 RITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVC 502
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
++ + G+ P+ ++++ LI + + M+ +G + ++ ++ L A
Sbjct: 503 RIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAG 562
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ EA E + M S G +P+ VSF L+ G + +M + G P
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 86/180 (47%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
+ILI+ ++G + ++++F G P+V T + ++ + + G + +L++M K
Sbjct: 167 DILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLK 226
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+CPDV FN+LI ++ M + G+ P + +Y VL+ RF
Sbjct: 227 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 286
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A+E+++ M S+G ++ L+ LCR R + LR M ++ P + ++N
Sbjct: 287 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 346
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 35/246 (14%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+D+AV L M P T++ ++N + A E+ R+ + + +
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI C+ G L A+++++ G + TF+ L+ LC+ G V EA E++ M G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL------DAK 309
+ P+ V F+ LI V D M + G +P +Y +L GL +A+
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 310 RFIEALEVVEG-----------------------------MVSRGFVPSFVSFKQLVVGL 340
+F+++L V MV R +P ++ L+ GL
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 341 CRHRRT 346
CR +T
Sbjct: 699 CRKGKT 704
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 139/353 (39%), Gaps = 22/353 (6%)
Query: 41 LARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANL 100
+ + ++ + L P+ N + ++ LLH Y+ RKD + + S+I N
Sbjct: 772 MGKIEKTNDLLPEMGNQ--NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL-----NG 824
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNF 160
+ P H + S+ L L A + R ++ R TFN
Sbjct: 825 ILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVE---------------VDRYTFNM 869
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG 220
+++ AN + A ++ + L + +D + ++ L + + V E K G
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
+ P R + L++GLC G ++ AF E+M +CP V + ++
Sbjct: 930 ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAT 989
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
+L M++ P + S+ +++ IEALE+ M + G VS+ L+ GL
Sbjct: 990 LLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGL 1049
Query: 341 CRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEIL 393
C +M GF+ ++ ++ +++ + + L ++L
Sbjct: 1050 CAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLL 1102
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 86/191 (45%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N ++ + + GE + E K + P+V TF+ L++ LC +G E++ ++KMEK
Sbjct: 202 NAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEK 261
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G P +V +N ++ +LD M KG +V +Y +++ L + R +
Sbjct: 262 SGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++ M R P+ V++ L+ G + L +M+ G P + +++
Sbjct: 322 GYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALID 381
Query: 374 CAVSKPRNYES 384
+S+ E+
Sbjct: 382 GHISEGNFKEA 392
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 99/262 (37%), Gaps = 37/262 (14%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F LI Y + + KA M P+ T+ +L L A + ++
Sbjct: 586 FDCLINGYGNSGEGL-KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG-- 239
+ VD N L+ +C+ G L+ AV +F E + + P+ T+++L+ GLC KG
Sbjct: 645 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 704
Query: 240 -------------------------MVEEAFE---------WLEKMEKCGVCPDVVVFNV 265
V+ F+ + E+M+ G PD+V N
Sbjct: 705 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNA 764
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
+I +L M + PN+ +Y +L+G K + + ++ G
Sbjct: 765 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNG 824
Query: 326 FVPSFVSFKQLVVGLCRHRRTE 347
+P ++ LV+G+C E
Sbjct: 825 ILPDKLTCHSLVLGICESNMLE 846
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMP-DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F TLI V R + +A E L+ M + +C P+ T+N +++ + A EV
Sbjct: 373 FNTLIDGLCKVGR-LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++ + +N ++ G+C+ L+ AV F + K G++ NV T+ TL+H C
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
VE+A W EKM + G PD ++ LI V++ + GF ++ +Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ D + E++ M G P +++ L+ +H+ E V+ + QM G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 361 FVPRMGMWRHIVN--CAVSK 378
P + + +++ C+V +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGE 631
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%)
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
YE DA LI GLCQ A++V ++ + G ++ ++ L+ C+
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
K E+ +E L MEK G PD + +N LI +++ M G P V +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 298 YQQVLYGLLDAKRFIEALEVVEGM 321
Y V+ EAL++ + M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM 642
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF- 216
FN +L+ L N ++ + + D + ILI LC+ + A++VF++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 217 PKSGLEPNVRT-----FSTLMHGLCEKGMVEEAFEWLEKM---EKCGVCPDVVVFNVLIX 268
K + NV F+TL+ GLC+ G ++EA E L +M E+C P+ V +N LI
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--VPNAVTYNCLID 414
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
V+ M PNV + ++ G+ A+ M G
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
+ V++ L+ C E+ + +M+ G P ++ +++ R++++ V
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV- 533
Query: 389 LDEILEG 395
++++ EG
Sbjct: 534 VEKLKEG 540
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 17/241 (7%)
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
AN +D+ ++ + L +A N L+ L + ++S + + + + P+V
Sbjct: 275 ANTAWDILSDLMKNKTPL----EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKM------EKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
T L++ LC+ V+EA E E+M + + D + FN LI
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 281 XVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
+L M + + PN +Y ++ G A + A EVV M P+ V+ +V G
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRNYESTCVSLDEILE-GC 396
+CRH M ++G + + +++ C+VS N E +++LE GC
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS---NVEKAMYWYEKMLEAGC 507
Query: 397 N 397
+
Sbjct: 508 S 508
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMP-DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F TLI V R + +A E L+ M + +C P+ T+N +++ + A EV
Sbjct: 373 FNTLIDGLCKVGR-LKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++ + +N ++ G+C+ L+ AV F + K G++ NV T+ TL+H C
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
VE+A W EKM + G PD ++ LI V++ + GF ++ +Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ D + E++ M G P +++ L+ +H+ E V+ + QM G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 361 FVPRMGMWRHIVN--CAVSK 378
P + + +++ C+V +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGE 631
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%)
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
YE DA LI GLCQ A++V ++ + G ++ ++ L+ C+
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
K E+ +E L MEK G PD + +N LI +++ M G P V +
Sbjct: 559 KNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 298 YQQVLYGLLDAKRFIEALEVVEGM 321
Y V+ EAL++ + M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM 642
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF- 216
FN +L+ L N ++ + + D + ILI LC+ + A++VF++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 217 PKSGLEPNVRT-----FSTLMHGLCEKGMVEEAFEWLEKM---EKCGVCPDVVVFNVLIX 268
K + NV F+TL+ GLC+ G ++EA E L +M E+C P+ V +N LI
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCA--PNAVTYNCLID 414
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
V+ M PNV + ++ G+ A+ M G
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
+ V++ L+ C E+ + +M+ G P ++ +++ R++++ V
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV- 533
Query: 389 LDEILEG 395
++++ EG
Sbjct: 534 VEKLKEG 540
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 102/241 (42%), Gaps = 17/241 (7%)
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
AN +D+ ++ + L +A N L+ L + ++S + + + + P+V
Sbjct: 275 ANAAWDILSDLMKNKTPL----EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKM------EKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
T L++ LC+ V+EA E EKM + + D + FN LI
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 281 XVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
+L M + + PN +Y ++ G A + A EVV M P+ V+ +V G
Sbjct: 391 ELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRNYESTCVSLDEILE-GC 396
+CRH M ++G + + +++ C+VS N E +++LE GC
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS---NVEKAMYWYEKMLEAGC 507
Query: 397 N 397
+
Sbjct: 508 S 508
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 4/260 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMP-DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
F TLI V R + +A E L+ M + +C P+ T+N +++ + A EV
Sbjct: 373 FNTLIDGLCKVGR-LKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSR 431
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++ + +N ++ G+C+ L+ AV F + K G++ NV T+ TL+H C
Sbjct: 432 MKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
VE+A W EKM + G PD ++ LI V++ + GF ++ +Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ D + E++ M G P +++ L+ +H+ E V+ + QM G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 361 FVPRMGMWRHIVN--CAVSK 378
P + + +++ C+V +
Sbjct: 612 LDPTVTTYGAVIDAYCSVGE 631
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%)
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
YE DA LI GLCQ A++V ++ + G ++ ++ L+ C+
Sbjct: 499 YEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCD 558
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
K E+ +E L MEK G PD + +N LI +++ M G P V +
Sbjct: 559 KNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTT 618
Query: 298 YQQVLYGLLDAKRFIEALEVVEGM 321
Y V+ EAL++ + M
Sbjct: 619 YGAVIDAYCSVGELDEALKLFKDM 642
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF- 216
FN +L+ L N ++ + + D + ILI LC+ + A++VF++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 217 PKSGLEPNVRT-----FSTLMHGLCEKGMVEEAFEWLEKM---EKCGVCPDVVVFNVLIX 268
K + NV F+TL+ GLC+ G ++EA E L +M E+C P+ V +N LI
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERC--VPNAVTYNCLID 414
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
V+ M PNV + ++ G+ A+ M G
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
+ V++ L+ C E+ + +M+ G P ++ +++ R++++ V
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV- 533
Query: 389 LDEILEG 395
++++ EG
Sbjct: 534 VEKLKEG 540
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 102/241 (42%), Gaps = 17/241 (7%)
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
AN +D+ ++ + L +A N L+ L + ++S + + + + P+V
Sbjct: 275 ANTAWDILSDLMKNKTPL----EAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVV 330
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKM------EKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
T L++ LC+ V+EA E E+M + + D + FN LI
Sbjct: 331 TLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAE 390
Query: 281 XVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
+L M + + PN +Y ++ G A + A EVV M P+ V+ +V G
Sbjct: 391 ELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGG 450
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRNYESTCVSLDEILE-GC 396
+CRH M ++G + + +++ C+VS N E +++LE GC
Sbjct: 451 MCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS---NVEKAMYWYEKMLEAGC 507
Query: 397 N 397
+
Sbjct: 508 S 508
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 123/289 (42%), Gaps = 4/289 (1%)
Query: 108 LHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
L + +K R D + ++I + V R +D V M D C P T+N ++N
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGR-LDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
+ E Y ++ + + L+ C++G + A+K + + + GL PN
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNE 402
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
T+++L+ C+ G + +AF +M + GV +VV + LI +
Sbjct: 403 YTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGK 462
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
M G PN+ SY +++G + AK ALE++ + RG P + + + GLC +
Sbjct: 463 MDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK 522
Query: 346 TEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
E + +M G ++ +++ A K N LDE+ E
Sbjct: 523 IEAAKVVMNEMKECGIKANSLIYTTLMD-AYFKSGNPTEGLHLLDEMKE 570
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/370 (19%), Positives = 146/370 (39%), Gaps = 44/370 (11%)
Query: 60 NSLNHPSSAVTLLH--LYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSF 117
N H + ++ L+ AR ++ +++K A ++ D + + + +
Sbjct: 136 NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK-ADCDVFDVLWSTRNVCVPGFGV 194
Query: 118 SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEV 177
D F LI L +++A++ M F+ +P R+ N +L+ D
Sbjct: 195 FDALFSVLIDL-----GMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
++ NI+I +C++G++ AA +F+E GL P+ T+++++ G +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
G +++ + E+M+ PDV+ +N LI M G PNV S
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 298 Y-------------QQVLYGLLDAKR----------------------FIEALEVVEGMV 322
Y QQ + +D +R +A + M+
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNY 382
G + V++ L+ GLC R +E + +M G +P + + +++ V K +N
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV-KAKNM 488
Query: 383 ESTCVSLDEI 392
+ L+E+
Sbjct: 489 DRALELLNEL 498
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/263 (20%), Positives = 109/263 (41%), Gaps = 9/263 (3%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
A+ +D+A+E L + P + + L + + A V ++ ++
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
L+ + G + + + DE + +E V TF L+ GLC+ +V +A ++ ++
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 253 K-CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
G+ + +F +I + + MV+KG P+ +Y ++ G
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
+EAL + + M G +++ LV GL + ++ L +M+ +G P
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE------ 718
Query: 372 VNCAVSKPRNYESTCVSLDEILE 394
V C ++YE C+ DE +E
Sbjct: 719 VLCISVLKKHYELGCI--DEAVE 739
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 1/173 (0%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
++ VE + LI GLC + A ++F + +G+ PN+ +++ L+HG + ++
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
A E L +++ G+ PD++++ I V++ M G N Y ++
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLM 549
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR-TEEVDWALR 354
+ E L +++ M + V+F L+ GLC+++ ++ VD+ R
Sbjct: 550 DAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 48/327 (14%)
Query: 51 TPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQ 110
+P + L S + P A + + + +F + LI KL + I +L
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLA- 108
Query: 111 TLKRRS----FSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
K RS + + F LIK+YA A+ +K + T M +F P + N +L+VLV
Sbjct: 109 --KHRSSGYPLTGEIFTYLIKVYAE-AKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 167 ANRLY-DVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
++R Y A E+++++ V + N+L++ C +LS A ++F + + + P+V
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
++ L+ G C KG V A E L+ M
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDM---------------------------------- 251
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
+ KGF P+ + ++ GL D F E + +E M+S+GF P F LV G C +
Sbjct: 252 -LNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGK 306
Query: 346 TEEVDWALRQMVRQGFVPRMGMWRHIV 372
EE + +++ G W ++
Sbjct: 307 VEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 95/224 (42%), Gaps = 26/224 (11%)
Query: 156 RTFNFVLNVLVANRL--YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
R FN + +VL +R Y + GE++ LIK + + F
Sbjct: 98 RYFNLIDDVLAKHRSSGYPLTGEIF---------------TYLIKVYAEAKLPEKVLSTF 142
Query: 214 DEFPKSGLEPNVRTFSTLMHGLCE-KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ + P + + ++ L +G +++AFE + GV P+ +N+L+
Sbjct: 143 YKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCL 202
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ M+ + P+V SY+ ++ G + A+E+++ M+++GFVP
Sbjct: 203 NDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD--- 259
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
+ L+ GLC +E L +M+ +GF P + NC V
Sbjct: 260 -RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS----VSNCLV 298
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 2/282 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMP 147
+L+T L LL +KRR + FT LI + V + ++ A E M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLME-AKELYNVMI 285
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
+P T+ ++N L L D A +++ R + LI G C+ +
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
+K+F E + G+ N T++ L+ G C G + A E +M PD+ +NVL+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+ + M ++ N+ +Y ++ G+ + +A ++ + S+G
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWR 369
P+ +++ ++ G CR E D ++M GF+P +++
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 4/230 (1%)
Query: 153 PSRRTFNFVLNVLVA-NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
P TF +LN NR+ D A +++ + + + LI+ LC+ L+ AV+
Sbjct: 151 PDLVTFTSLLNGYCHWNRIED-AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
+F++ +G PNV T++ L+ GLCE G +A L M K + P+V+ F LI
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+ ++M++ YP+V +Y ++ GL EA ++ M G P+ V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKP 379
+ L+ G C+ +R E+ +M ++G V + ++ C V +P
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+L E D L+ G C + A+ +FD+ G +PNV T++TL+ LC+ +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
A E +M G P+VV +N L+ +L M+++ PNV ++ ++
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+ + +EA E+ M+ P ++ L+ GLC + +E M R G
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 363 P 363
P
Sbjct: 326 P 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 105/239 (43%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ + A++ M + PS F +L+V+ YDV ++E L + C N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I++ +C + A + K G EP++ TF++L++G C +E+A +++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGM 182
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G P+VV + LI + + M G PNV +Y ++ GL + R+ +A
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++ M+ R P+ ++F L+ + + E M++ P + + ++N
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 2/187 (1%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRI 136
R P E T+LI + ++ + ++ ++ ++ +T LI+ Y V R
Sbjct: 321 RNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP- 379
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A E M + P RT+N +L+ L N + A ++E + ++++ I+
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTII 439
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I+G+C+ G++ A +F G++PNV T++T++ G C +G++ EA +KM++ G
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGF 499
Query: 257 CPDVVVF 263
P+ V+
Sbjct: 500 LPNESVY 506
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ + + + +F++ G+ P + T + +MH +C A +L KM K G
Sbjct: 89 LLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLG 148
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD+V F L+ + D ++ GF PNV +Y ++ L + A+
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
E+ M + G P+ V++ LV GLC R + W LR M+++ P + + +++
Sbjct: 209 ELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAF 268
Query: 376 VSKPRNYES 384
V + E+
Sbjct: 269 VKVGKLMEA 277
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ T+N +++ L + A + + +D+ NILI G CQ G+ A +
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
DE G++P T+++L++ LC K EA E EK+ G+ PD+V+ N L+
Sbjct: 420 HDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA 479
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+L M P+ +Y ++ GL +F EA E++ M RG P +S
Sbjct: 480 IGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 539
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
+ L+ G + T+ +M+ GF P +
Sbjct: 540 YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 29/347 (8%)
Query: 48 DWLTPKQ-ATTLCNSLNHPSSAVTLL-HLYTARKDFNPTEPFCTSLITKLAHA------- 98
D LTP +TTL + + P+ A + H+ R DF T+ ++I+KL+
Sbjct: 67 DKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQ-TQCLAIAVISKLSSPKPVTQLL 125
Query: 99 ------------NLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSM 146
NL D + L H L+ +S F L+ R +D+A+E M
Sbjct: 126 KEVVTSRKNSIRNLFDEL-VLAHDRLETKS---TILFDLLVRCCCQLRMVDEAIECFYLM 181
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+ +P T N +L +L + A Y R+ ++ + NI+I LC++G+L
Sbjct: 182 KEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKL 241
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
A G++P + T++TL+ G +G +E A + +M+ G PD+ +N +
Sbjct: 242 KKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPI 301
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ VL M G P+ SY ++ G + A + MV +G
Sbjct: 302 L---SWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGM 358
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
VP+F ++ L+ GL + E + +R++ +G V + ++N
Sbjct: 359 VPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILIN 405
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P++ T+ ++ VL A E++E ++ D MN L+ G C G + A +
Sbjct: 430 PTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSL 489
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
E + P+ T++ LM GLC +G EEA E + +M++ G+ PD + +N LI
Sbjct: 490 LKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSK 549
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V D M+ GF P + +Y +L GL + A E++ M S G VP+ S
Sbjct: 550 KGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Query: 333 F 333
F
Sbjct: 610 F 610
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 97/222 (43%), Gaps = 3/222 (1%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
RI+ A + M P +T+N +L+ + A EV + + D+ N
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYN 331
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI+G G+L A DE K G+ P T++TL+HGL + +E A + ++ +
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ D V +N+LI + D M+ G P +Y ++Y L + EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
E+ E +V +G P V L+ G C + L++M
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 2/193 (1%)
Query: 72 LHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAH 131
LH PT+ TSLI L N L + + + D + H
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGH 477
Query: 132 VA-RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
A +D+A L M P T+N ++ L ++ A E+ R ++ D
Sbjct: 478 CAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
N LI G ++G+ A V DE G P + T++ L+ GL + E A E L +
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 251 MEKCGVCPDVVVF 263
M+ G+ P+ F
Sbjct: 598 MKSEGIVPNDSSF 610
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 114/239 (47%), Gaps = 2/239 (0%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLN-VLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
I A E M + +TFN ++N + +L D G + V D N
Sbjct: 185 ISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYN 244
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++K + ++G LS ++ + K+GL PN T++ L++G C+ G ++EAF+ +E M++
Sbjct: 245 TILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
V PD+ +N+LI ++D M P+V +Y ++ G + +EA
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR-QGFVPRMGMWRHIV 372
+++E M + G + V+ + LC+ + E V ++++V GF P + + ++
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 4/194 (2%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ---QGELSAA 209
PS+ F+ L+ + VA ++++ RL ++ + N L+ GL + +S+A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVCPDVVVFNVLIX 268
+VFD+ K G+ NV+TF+ L++G C +G +E+A LE+M + V PD V +N ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+L M + G PN +Y ++YG EA ++VE M +P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 329 SFVSFKQLVVGLCR 342
++ L+ GLC
Sbjct: 309 DLCTYNILINGLCN 322
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 4/250 (1%)
Query: 116 SFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDV 173
FS D + TLIK Y V + A+E + M + T N +L+ L R D
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGD-LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDE 469
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A + +A + VD LI G ++ ++ A++++DE K + P V TF++L+
Sbjct: 470 AHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIG 529
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
GLC G E A E +++ + G+ PD FN +I + ++ F P
Sbjct: 530 GLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKP 589
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
+ + +L GL +AL ++ V + V++ ++ C+ ++ +E L
Sbjct: 590 DNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT-VTYNTMISAFCKDKKLKEAYDLL 648
Query: 354 RQMVRQGFVP 363
+M +G P
Sbjct: 649 SEMEEKGLEP 658
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNF 160
LD H LL+ KR D+ + + + +++KA+E M + P+ TFN
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNS 526
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG 220
++ L + ++A E ++ + D N +I G C++G + A + ++E K
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHS 586
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
+P+ T + L++GLC++GM E+A + + E+ V D V +N +I
Sbjct: 587 FKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEA 644
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQ 335
+L M KG P+ +Y + L++ + E E++ + F F S K+
Sbjct: 645 YDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL-----KKFSGKFGSMKR 695
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 110/309 (35%), Gaps = 71/309 (22%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+ E LL M P+R T+N ++ A ++ E + V D C N
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYN 314
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI GLC G + +++ D L+P+V T++TL+ G E G+ EA + +E+ME
Sbjct: 315 ILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND 374
Query: 255 GV------------------------------------CPDVVVFNVLIXXXXXXXXXXX 278
GV PD+V ++ LI
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV----------- 327
++ M +KG N + +L L ++ EA ++ RGF+
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 328 ------------------------PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P+ +F L+ GLC H +TE ++ G +P
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 364 RMGMWRHIV 372
+ I+
Sbjct: 555 DDSTFNSII 563
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 65/168 (38%), Gaps = 1/168 (0%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVET 142
PT SLI L H + + + DD F I L R++KA E
Sbjct: 519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF 578
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
P T N +LN L + + A + EVD N +I C+
Sbjct: 579 YNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE-EREVDTVTYNTMISAFCK 637
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
+L A + E + GLEP+ T+++ + L E G + E E L+K
Sbjct: 638 DKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D +I+I GLC+ G+ A+ ++DE + PN RT L+ GLC+KGM+ EA L
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+ + G D+V++N++I + +++ G P+V ++ ++YG
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ EA ++++ + G PS VS+ L+ T+ +D R+M +G P
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS +FN +++ D+A + + + NILI GLC G ++ A+++
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ K G+EP+ T++ L G GM+ A+E + M G+ PDV+ + +L+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 273 XXXXXXXXXVLDMMVRKGFYPN-VGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+L M+ +GF N + +L GL R EAL + M + G P V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++ ++ GLC+ + + W +M + +P
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 53/338 (15%)
Query: 86 PFCTSLITK-LAHANLLDPIHTLLHQTLK-----RRSFSDDFFFTLIKLYAHVARRIDKA 139
F T L++ LA + +L Q L+ R+ S + ++ + R +D +
Sbjct: 84 SFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDS 143
Query: 140 VETLLSMPDFQCWPSRRTFNFVL-NVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
+ L M D S +++N VL + ++++DV E+ + V +
Sbjct: 144 LYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTV--------VD 195
Query: 199 GLCQQGELSAAV-----------------------------------KVFDEFPKSGLEP 223
GLC+Q +L AV F K GL P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL 283
+V + + L++GLC G + EA E M K GV PD V +N+L V+
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 284 DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF-VPSFVSFKQLVVGLCR 342
M+ KG P+V +Y +L G L +++ M+SRGF + S + ++ GLC+
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 343 HRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSK 378
R +E QM G P + + +++ C + K
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 15/276 (5%)
Query: 80 DFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVA-RRIDK 138
+ N P C+ +++ L +D +L +Q +K S D I ++ + D
Sbjct: 359 ELNSIIP-CSVMLSGLCKTGRIDEALSLFNQ-MKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A+ M D + P+ RT +L L + A + ++ +D NI+I
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVID 476
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
G + G + A+++F ++G+ P+V TF++L++G C+ + EA + L+ ++ G+ P
Sbjct: 477 GYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAP 536
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL------------L 306
VV + L+ + M +G P +Y + GL L
Sbjct: 537 SVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL 596
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
+ F + + + M S G P +++ ++ LCR
Sbjct: 597 RERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 158/371 (42%), Gaps = 13/371 (3%)
Query: 11 ARTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDW-LTPKQATTLCNSLNHPSSAV 69
A L+P + +C + N + +L ++++ ++P T+ + S+
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM---CSSG 431
Query: 70 TLLHLYTARKDF-----NPTEPFCTSLI-TKLAHANLLDPIHTLLHQTLKRRSFSDDFF- 122
L Y K+ P T+LI T L ++ D + L + +K + + D F
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL--KEMKEQGIAPDIFC 489
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
+ + + A+R+D+A L+ M + P+ T+ ++ + + A + +
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
V + LI C++G++ A + G+ + +T++ LM+GL + V+
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
+A E +M G+ PDV + VLI + D MV +G PNV Y +L
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
G + +A E+++ M +G P+ V++ ++ G C+ E +M +G V
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729
Query: 363 PRMGMWRHIVN 373
P ++ +V+
Sbjct: 730 PDSFVYTTLVD 740
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 105/234 (44%), Gaps = 8/234 (3%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVA-GEVYEAAP---RLAVEVD 189
+R++ A L+ M T++ +++ L+ R D A G V+E + +
Sbjct: 291 KRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMY 350
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
CC+ ++ K +G + A +FD SGL P + +++L+ G C + V + +E L
Sbjct: 351 DCCICVMSK----EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
+M+K + + ++ ++ M+ G PNV Y ++ L
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
RF +A+ V++ M +G P + L++GL + +R +E L +MV G P
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 116/291 (39%), Gaps = 9/291 (3%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF--TLIKLYAHVARRIDKAVETLLSM 146
T L+ L + +D + + ++ + + D F LI ++ + + KA M
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFRE-MRGKGIAPDVFSYGVLINGFSKLGN-MQKASSIFDEM 653
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+ P+ +N +L + + A E+ + + +A +I G C+ G+L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
+ A ++FDE GL P+ ++TL+ G C VE A +K G FN L
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK-GCASSTAPFNAL 772
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGF----YPNVGSYQQVLYGLLDAKRFIEALEVVEGMV 322
I VL+ ++ F PN +Y ++ L A E+ M
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ +P+ +++ L+ G + R E+ + + G P M+ I+N
Sbjct: 833 NANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN 883
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
NI+I LC++G L AA ++F + + L P V T+++L++G + G E F ++
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK-----GFYPNVGSYQQVLYGLLDA 308
G+ PD ++++V+I ++D M K G ++ + + +L G
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC--RHRRTE 347
A +V+E MV ++P + +L+ C ++R E
Sbjct: 929 GEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVE 969
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 11/175 (6%)
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
FD F K PN T++ ++ LC++G +E A E +M+ + P V+ + L+
Sbjct: 797 FDRFGK----PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP---- 328
V D + G P+ Y ++ L +AL +V+ M ++ V
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCK 912
Query: 329 -SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPR 380
S + + L+ G + E + + MVR ++P ++N C S R
Sbjct: 913 LSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 106/268 (39%), Gaps = 24/268 (8%)
Query: 118 SDDFFFTLIKLYAHVARR-IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA-NRLYDVAG 175
SDD I ++A+ I++AV S + P +L+ L+ NRL D+
Sbjct: 148 SDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL-DLFW 206
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGEL---------------------SAAVKVFD 214
+VY+ V D ++LI C+ G + A+K+ +
Sbjct: 207 DVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKE 266
Query: 215 EFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
GL P T+ L+ GLC+ +E+A L +M+ GV D +++LI
Sbjct: 267 SMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGR 326
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
++ MV G Y + + +A + +GM++ G +P ++
Sbjct: 327 NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYA 386
Query: 335 QLVVGLCRHRRTEEVDWALRQMVRQGFV 362
L+ G CR + + L +M ++ V
Sbjct: 387 SLIEGYCREKNVRQGYELLVEMKKRNIV 414
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 7/291 (2%)
Query: 92 ITKLAHANLLDPIHTLL-HQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQ 150
+++LA A LD I LL HQ + + F +I LY A +A++T +M +
Sbjct: 78 VSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGK-AGMTKQALDTFFNMDLYG 136
Query: 151 CWPSRRTFNFVLNVLVAN-RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
C S ++FN L VL N L+ + +++A + +++DA NI IK C+ G L A
Sbjct: 137 CKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGA 196
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLC--EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
E KSGL P+V T++TL+ L E+ ++ L ++ C P++ FNV I
Sbjct: 197 YMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGCK--PNLTTFNVRI 254
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+L +M + P+ +Y V+ G A+ A V M +G+
Sbjct: 255 QFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYK 314
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
P+ ++ ++ LC+ + + +R+ + P + ++ V K
Sbjct: 315 PNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKK 365
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
RR A + LL MP Q P T+N V+ R D+A VY A + +
Sbjct: 261 RRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIY 320
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
+I LC+ G A + + + PN+ T L+ GL +KG +++A +E
Sbjct: 321 QTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 6/245 (2%)
Query: 122 FFTLIKLYAHVARRIDKAV---ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
F + I Y AR++D A+ +T+ + D + P+ +N V+N V + D A Y
Sbjct: 160 FRSAIDAYCR-ARKMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
+ + + D C NILI G C+ + A+ +F E + G EPNV +F+TL+ G
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSY 298
G +EE + +M + G +L+ ++ ++ K P+ Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 299 QQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR 358
++ L + + A+E++E + +G P F++ LV GL + RTE+ + +M+
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 359 QGFVP 363
G +P
Sbjct: 397 AGILP 401
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 101/222 (45%), Gaps = 7/222 (3%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEA 180
F TLI+ + + I++ V+ M + C S T +++ L R+ D G V +
Sbjct: 266 FNTLIRGFLSSGK-IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDL 324
Query: 181 APR--LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
+ L E D L++ LC + + A+++ +E K G P +TL+ GL +
Sbjct: 325 LNKRVLPSEFD---YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKS 381
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSY 298
G E+A ++EKM G+ PD V FN+L+ + + KG+ P+ +Y
Sbjct: 382 GRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTY 441
Query: 299 QQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
++ G R E +V M+ + +P ++ +L+ GL
Sbjct: 442 HVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL 483
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D +I+I GLC+ G+ A+ ++DE + PN RT L+ GLC+KGM+ EA L
Sbjct: 397 DLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLL 456
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+ + G D+V++N++I + +++ G P+V ++ ++YG
Sbjct: 457 DSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKT 516
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ EA ++++ + G PS VS+ L+ T+ +D R+M +G P
Sbjct: 517 QNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 1/212 (0%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS +FN +++ D+A + + + NILI GLC G ++ A+++
Sbjct: 220 PSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALEL 279
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ K G+EP+ T++ L G GM+ A+E + M G+ PDV+ + +L+
Sbjct: 280 ASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQ 339
Query: 273 XXXXXXXXXVLDMMVRKGFYPN-VGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+L M+ +GF N + +L GL R EAL + M + G P V
Sbjct: 340 LGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
++ ++ GLC+ + + W +M + +P
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 135/338 (39%), Gaps = 53/338 (15%)
Query: 86 PFCTSLITK-LAHANLLDPIHTLLHQTLK-----RRSFSDDFFFTLIKLYAHVARRIDKA 139
F T L++ LA + +L Q L+ R+ S + ++ + R +D +
Sbjct: 84 SFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDDS 143
Query: 140 VETLLSMPDFQCWPSRRTFNFVL-NVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
+ L M D S +++N VL + ++++DV E+ + V +
Sbjct: 144 LYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTV--------VD 195
Query: 199 GLCQQGELSAAV-----------------------------------KVFDEFPKSGLEP 223
GLC+Q +L AV F K GL P
Sbjct: 196 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 255
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL 283
+V + + L++GLC G + EA E M K GV PD V +N+L V+
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 284 DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF-VPSFVSFKQLVVGLCR 342
M+ KG P+V +Y +L G L +++ M+SRGF + S + ++ GLC+
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 375
Query: 343 HRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSK 378
R +E QM G P + + +++ C + K
Sbjct: 376 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGK 413
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 123/297 (41%), Gaps = 15/297 (5%)
Query: 59 CNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFS 118
C N V L + + + N P C+ +++ L +D +L +Q +K S
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGFELNSIIP-CSVMLSGLCKTGRIDEALSLFNQ-MKADGLS 395
Query: 119 DDFFFTLIKLYAHVA-RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEV 177
D I ++ + D A+ M D + P+ RT +L L + A +
Sbjct: 396 PDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSL 455
Query: 178 YEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
++ +D NI+I G + G + A+++F ++G+ P+V TF++L++G C+
Sbjct: 456 LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 515
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
+ EA + L+ ++ G+ P VV + L+ + M +G P +
Sbjct: 516 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 575
Query: 298 YQQVLYGL------------LDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
Y + GL L + F + + + M S G P +++ ++ LCR
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCR 632
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 134/305 (43%), Gaps = 9/305 (2%)
Query: 80 DFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK--RRSFSDDFFFTLIKLYAHVARRID 137
+F E ++I L +L +K R S S + ++I + V D
Sbjct: 549 NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGD-TD 607
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
AVET M + P+ TF ++N + D+A E+ + +++D LI
Sbjct: 608 SAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALI 667
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G C++ ++ A +F E P+ GL PNV +++L+ G G ++ A + +KM G+
Sbjct: 668 DGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGIS 727
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
D+ + +I + ++ G P+ + ++ GL +F++A ++
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKM 787
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR---QMVRQGFVPRMGMWRHIVNC 374
+E M + P+ + + ++ G H R ++ A R +M+ +G V ++ +V+
Sbjct: 788 LEEMKKKDVTPNVLLYSTVIAG---HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Query: 375 AVSKP 379
V KP
Sbjct: 845 RVEKP 849
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/263 (19%), Positives = 111/263 (42%), Gaps = 21/263 (7%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
+ KA++ M + P + F+ ++ N + A E Y + + +
Sbjct: 358 GNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVL 417
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
++ +I+G + AA+++F++ +S + + C++G V+ A +L+ ME
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLL-FCKQGKVDAATSFLKMME 476
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ G+ P+VV +N ++ + M+ KG PN +Y ++ G K
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
A +V+ M + F + V + ++ GLC+ +T + L+ ++++
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE------------- 583
Query: 373 NCAVSKPRNYESTCVSLDEILEG 395
+ Y +C S + I++G
Sbjct: 584 -------KRYSMSCTSYNSIIDG 599
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 2/223 (0%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+R+D AV+ M D + P N VL+ LV + L D A E+Y + V D
Sbjct: 183 KRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTT 242
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME- 252
+L++ ++ + AVK+F G EP+ FS + C+ + A + L +M
Sbjct: 243 QLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRG 302
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
K GV + +I V+D MV G +V + ++ G
Sbjct: 303 KLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELG 362
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE-VDWALR 354
+AL++ M G P V F +V C++ E+ +++ +R
Sbjct: 363 KALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMR 405
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 116/303 (38%), Gaps = 20/303 (6%)
Query: 104 IHTLLHQTLKRRS-------FSDDF------FFTLIKLYAHVAR--RIDKAVETLLSMPD 148
+HT++ LK S F+D F F K++ + ++D A L M
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQ 477
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P+ +N ++ + D+A ++ +E + +ILI G + +
Sbjct: 478 KGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQN 537
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG-VCPDVVVFNVLI 267
A V ++ S E N ++T+++GLC+ G +A E L+ + K +N +I
Sbjct: 538 AWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSII 597
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
M G PNV ++ ++ G + R ALE+ M S
Sbjct: 598 DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELK 657
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCV 387
++ L+ G C+ + ++ G +P + ++ N +S RN
Sbjct: 658 LDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY----NSLISGFRNLGKMDA 713
Query: 388 SLD 390
++D
Sbjct: 714 AID 716
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 114/254 (44%), Gaps = 3/254 (1%)
Query: 108 LHQTLKRRSFSDDFFF--TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
L + ++R S D F T+I+ + + ++KA+E M C S T+ +++
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCE-GKELEKALELANEMKGSGCSWSLVTWGILIDAF 222
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
D A + + +E D LI+G C GEL +FDE + G P
Sbjct: 223 CKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
T++TL+ G C+ G ++EA E E M + GV P+V + LI +L++
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
M+ K PN +Y ++ L +A+E+VE M R P +++ L+ GLC
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 346 TEEVDWALRQMVRQ 359
+E L M++
Sbjct: 403 LDEASKLLYLMLKD 416
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N +I+G C+ EL A+++ +E SG ++ T+ L+ C+ G ++EA +L
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M+ G+ D+VV+ LI + D ++ +G P +Y ++ G
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
+ EA E+ E M+ RG P+ ++ L+ GLC +T+E L M+ + P +
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 369 RHIVN 373
I+N
Sbjct: 356 NIIIN 360
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 137/324 (42%), Gaps = 6/324 (1%)
Query: 58 LCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSF 117
LC + A+ LL+L KD P +I KL L+ ++ KRR+
Sbjct: 327 LC-GVGKTKEALQLLNLMI-EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384
Query: 118 SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCW--PSRRTFNFVLNVLVA-NRLYDVA 174
D+ + ++ +D+A + L M + P ++N +++ L NRL+ A
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ-A 443
Query: 175 GEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHG 234
++Y+ D NIL+ + G+++ A++++ + S + N T++ ++ G
Sbjct: 444 LDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDG 503
Query: 235 LCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPN 294
C+ GM+ A L KM + P V +N L+ + + M R +P+
Sbjct: 504 FCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPD 563
Query: 295 VGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
V S+ ++ G L A A ++ GM G P ++ +L+ + +E
Sbjct: 564 VVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFD 623
Query: 355 QMVRQGFVPRMGMWRHIVNCAVSK 378
+MV GF P + ++ +S+
Sbjct: 624 KMVDSGFEPDAHICDSVLKYCISQ 647
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A E++E V + LI GLC G+ A+++ + + EPN T++ +++
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY- 292
LC+ G+V +A E +E M+K PD + +N+L+ +L +M++ Y
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 293 -PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
P+V SY +++GL R +AL++ + +V +
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 40/259 (15%)
Query: 108 LHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
LH+ + R + D + +LI + +DKA + + M C P+ RTFN ++N
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCK-ENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 166 V-ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPN 224
ANR+ D E++ V D N LI+G C+ G+L+ A ++F E + PN
Sbjct: 414 CKANRIDD-GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 225 VRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLD 284
+ T+ L+ GLC+ G E+A E EK+EK + D+ ++N++I
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII----------------- 515
Query: 285 MMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHR 344
+G+ +A + +A ++ + +G P ++ ++ GLC+
Sbjct: 516 ------------------HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKG 557
Query: 345 RTEEVDWALRQMVRQGFVP 363
E + R+M G P
Sbjct: 558 PLSEAELLFRKMEEDGHAP 576
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 103/235 (43%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A+E L M + ++ +++ L + D A ++ + + NILI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
G C G K+ + K + PNV TFS L+ ++G + EA E ++M G+ P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
D + + LI ++D+MV KG PN+ ++ ++ G A R + LE+
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
M RG V V++ L+ G C + ++MV + P + ++ +++
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ D A++ M + P+ F+ + + + + YD+ + + + + ++
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I C+ +L A + K G EPN TFSTL++GLC +G V EA E +++M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD++ N L+ ++D MV G PN +Y VL + + + A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+E++ M R V + ++ GLC+H + +M +G + + ++
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query: 63 NHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFF 122
NH A ++ L + K +P LI AN +D L + R +D
Sbjct: 382 NHLDKANQMVDLMVS-KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVT 440
Query: 123 F-TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TLI+ + + + ++ A E M + P+ T+ +L+ L N + A E++E
Sbjct: 441 YNTLIQGFCELGK-LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ +E+D NI+I G+C ++ A +F P G++P V+T++ ++ GLC+KG +
Sbjct: 500 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPL 559
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA KME+ G PD +N+LI +++ + R GF + + + V
Sbjct: 560 SEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMV 619
Query: 302 LYGLLDA---KRFIEAL 315
+ L D K F++ L
Sbjct: 620 IDMLSDGRLKKSFLDML 636
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 105/221 (47%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ TF+ ++N L A E+ + + + D +N L+ GLC G+ + A+ +
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
D+ + G +PN T+ +++ +C+ G A E L KME+ + D V ++++I
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ + M KG N+ +Y ++ G +A R+ + +++ M+ R P+ V+
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
F L+ + + E + ++M+ +G P + +++
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 376
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 92/202 (45%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+L E + + LI GLC +G +S A+++ D + G +P++ T +TL++GLC G
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA ++KM + G P+ V + ++ +L M + + Y ++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
GL A + M +G + +++ L+ G C R ++ LR M+++
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKIN 330
Query: 363 PRMGMWRHIVNCAVSKPRNYES 384
P + + +++ V + + E+
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREA 352
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 114/271 (42%), Gaps = 39/271 (14%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+AV + F P + ++N +LN L+ + Y + VY+ D NIL+
Sbjct: 202 QAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL 261
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH------------------------ 233
+ G++ ++FDE + G P+ T++ L+H
Sbjct: 262 WTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGID 321
Query: 234 -----------GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXV 282
GL G +E +L++M K G PDVV + V+I +
Sbjct: 322 PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 283 LDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
M KG PNV +Y ++ GL A F EA +++ M SRG P+FV + LV L +
Sbjct: 382 FREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRK 441
Query: 343 HRRTEEVDWALRQMVRQG----FVPRMGMWR 369
+ E +R+MV++G VP+M +R
Sbjct: 442 AGKLSEARKVIREMVKKGHYVHLVPKMMKYR 472
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHVARRIDK---AVETLLSMPDFQCWPSRRTFNFVLNV 164
L + R FS D + I L H+ + +K A+ TL M + PS + +++
Sbjct: 276 LFDEMARDGFSPDSYTYNILL--HILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 165 LVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPN 224
L + + + D C ++I G GEL A ++F E G PN
Sbjct: 334 LSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPN 393
Query: 225 VRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLD 284
V T+++++ GLC G EA L++ME G P+ VV++ L+ V+
Sbjct: 394 VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIR 453
Query: 285 MMVRKGFY 292
MV+KG Y
Sbjct: 454 EMVKKGHY 461
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 15/270 (5%)
Query: 126 IKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLA 185
+K +H + +D A++ M + + + N V+ V V DVA +Y
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG------ 239
+ ++ NILIK C +LS ++ F + K G +P+V TF+TL+HGLC +
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 240 -----MVE----EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
MVE EA ++M + G+ P V+ FN LI +++ MV KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 291 FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
+ +V +Y ++ G+ AL ++ M P V + ++ LC+ +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 351 WALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
+ +M+ +G P + + +++ S R
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAF 245
++ D + +I LC+ G S A +F E + G+ PNV T++ ++ G C G +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 246 EWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL 305
L M + + PDV+ FN LI + D M+ + +P+ +Y ++YG
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 306 LDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
RF +A + + M S P V+F ++ CR +R +E LR++ R+G V
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 366 GMWRHIVN 373
+ +++
Sbjct: 468 TTYNTLIH 475
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAA---------------VKVFDEFPKSGLEPNVRT 227
+L + D N L+ GLC + +S A V +FD+ + GL P V T
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
F+TL++GLC +G V EA + KM G+ DVV + ++ +L M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
P+V Y ++ L +A + M+ +G P+ ++ ++ G C R
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGC 396
+ LR M+ + P + + +++ +V + + +E+ + DE+L C
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC-DEMLHRC 396
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVL-VANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
+AV M + P TFN ++N L + R+ + A V + + + +D +
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTI 267
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ G+C+ G+ +A+ + + ++ ++P+V +S ++ LC+ G +A +M + G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
P+V +N +I +L M+ + P+V ++ ++ + + EA +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
+ + M+ R P V++ ++ G C+H R ++
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 108/284 (38%), Gaps = 4/284 (1%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRID 137
++ NP +LI+ L L + L R F D + + R D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A M D P TFN +++V + D ++ R + + N LI
Sbjct: 419 DAKH----MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G C+ L+AA +F E G+ P+ T + L++G CE +EEA E E ++ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
D V +N++I + + G P+V +Y ++ G +A +
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
M G P ++ L+ G + ++ + +M GF
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 53/102 (51%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
+N +++ + D A +++ + P VE D N++I G C + +S A +F +
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
+G EP+ T++TL+ G + G ++++ E + +M G D
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD 641
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 132/322 (40%), Gaps = 56/322 (17%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQ 150
L+ H + + + +L ++++ S +++ ++A + IDKA P FQ
Sbjct: 49 LVRAKMHEEIQELHNLILSSSIQKTKLSS--LLSVVSIFAK-SNHIDKA------FPQFQ 99
Query: 151 C--------WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
PS +N +L + R + +Y+ + N+LI+ LC
Sbjct: 100 LVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCD 159
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
+ AA ++FDE P+ G +PN TF L+ G C+ G+ ++ E L ME GV P+ V+
Sbjct: 160 SSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVI 219
Query: 263 FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL------LDAKRFIEALE 316
+N ++ +++ M +G P++ ++ + L LDA R +E
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279
Query: 317 VVE------------GMVSRGF---------------------VPSFVSFKQLVVGLCRH 343
+ E ++ +GF + S S+ + GL RH
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 344 RRTEEVDWALRQMVRQGFVPRM 365
+ E + L+QM +G P +
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSI 361
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 34/251 (13%)
Query: 145 SMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
S+ + C P T++ +LN L + A ++ ++ D+ NI I C+QG
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQG 573
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
++S+A +V + K G ++ T+++L+ GL K + E +++M++ G+ P++ +N
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV----------------------------- 295
I +LD M++K PNV
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693
Query: 296 -----GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
G Y + LL A + ++A E++E ++ RGF +K LV LC+ E
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753
Query: 351 WALRQMVRQGF 361
L +M+ +G+
Sbjct: 754 GILHKMIDRGY 764
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 130/319 (40%), Gaps = 27/319 (8%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRI 136
K P+ L+ L +L T++ +KR D + L+ Y V + +
Sbjct: 355 KGIGPSIYSYNILMDGLCKLGMLSDAKTIVG-LMKRNGVCPDAVTYGCLLHGYCSVGK-V 412
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A L M C P+ T N +L+ L A E+ +D NI+
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472
Query: 197 IKGLCQQGELSAAVKVF-----------------------DEFPKSGLEPNVRTFSTLMH 233
+ GLC GEL A+++ D ++ P++ T+STL++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
GLC+ G EA +M + PD V +N+ I VL M +KG +
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
++ +Y ++ GL + E +++ M +G P+ ++ + LC + E+ L
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652
Query: 354 RQMVRQGFVPRMGMWRHIV 372
+M+++ P + +++++
Sbjct: 653 DEMMQKNIAPNVFSFKYLI 671
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 4/278 (1%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQ 150
LI L ++ +D L + ++ ++F F ++ A DK +E L +M F
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
P++ +N +++ D + ++ E + D N I LC++G++ A
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 211 KVFDEFPKS---GL-EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
++F + GL PN T++ ++ G C+ G++E+A E + + + +N+
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ VL M KG P++ SY ++ GL +A +V M G
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGV 392
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
P V++ L+ G C + + L++M+R +P
Sbjct: 393 CPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 9/224 (4%)
Query: 133 ARRI--DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
A RI D ++ L +P P+ T+N +L L + A ++E+
Sbjct: 271 ASRIFSDMELDEYLGLP----RPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
NI ++GL + G+ A V + G+ P++ +++ LM GLC+ GM+ +A +
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M++ GVCPD V + L+ +L M+R PN + +L+ L R
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
EA E++ M +G+ V+ +V GLC + E+D A+
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLC---GSGELDKAIE 487
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 23/233 (9%)
Query: 154 SRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
S +++N L LV + + A V + + NIL+ GLC+ G LS A +
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIV 384
Query: 214 DEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXX 273
++G+ P+ T+ L+HG C G V+ A L++M + P+ N+L+
Sbjct: 385 GLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKM 444
Query: 274 XXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM------------ 321
+L M KG+ + + ++ GL + +A+E+V+GM
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 322 -----------VSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ +P +++ L+ GLC+ R E +M+ + P
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP 557
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 140/323 (43%), Gaps = 39/323 (12%)
Query: 107 LLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
L++ K++ + + F +++ YA A+++D+A+ M + P+ FN +L+ L
Sbjct: 156 LINAMRKKKMLNVETFCIVMRKYAR-AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALC 214
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
++ A EV+E R D+ +IL++G ++ L A +VF E +G P++
Sbjct: 215 KSKNVRKAQEVFENM-RDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIV 273
Query: 227 TFSTLMHGLCEKGMV-----------------------------------EEAFEWLEKM 251
T+S ++ LC+ G V EEA + +M
Sbjct: 274 TYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEM 333
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
E+ G+ DV VFN LI VL M KG PN S +L L++
Sbjct: 334 ERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEK 393
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
EA +V M+ + P ++ ++ C + E D + M ++G P M + +
Sbjct: 394 DEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVL 452
Query: 372 VNCAVSKPRNYESTCVSLDEILE 394
+N + + R + CV L+E++E
Sbjct: 453 IN-GLCEERTTQKACVLLEEMIE 474
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 13/221 (5%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-----ANRLYDVAGEVYEAAPRLAVE 187
A R+D+A+ + SM C P+ F+ +VLV NRL + A + + R ++
Sbjct: 285 AGRVDEALGIVRSMDPSICKPT----TFIYSVLVHTYGTENRLEE-AVDTFLEMERSGMK 339
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEW 247
D N LI C+ + +V E G+ PN ++ + ++ L E+G +EAF+
Sbjct: 340 ADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Query: 248 LEKMEKCGVC-PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
KM K VC PD + ++I V M +KG +P++ ++ ++ GL
Sbjct: 400 FRKMIK--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
+ + +A ++E M+ G PS V+F +L L + R +
Sbjct: 458 EERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEERED 498
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 3/191 (1%)
Query: 121 FFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYE 179
F ++++ R+++AV+T L M FN ++ ANR+ +V + E
Sbjct: 308 FIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKE 367
Query: 180 AAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
+ C NI+++ L ++GE A VF + K EP+ T++ ++ CEK
Sbjct: 368 MKSKGVTPNSKSC-NIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKK 425
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
+E A + + M K GV P + F+VLI +L+ M+ G P+ ++
Sbjct: 426 EMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFG 485
Query: 300 QVLYGLLDAKR 310
++ L+ +R
Sbjct: 486 RLRQLLIKEER 496
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 96/231 (41%), Gaps = 6/231 (2%)
Query: 154 SRRTFNFVLNVLVANRLYDVAGEVYEAA-PRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
S R ++ ++ R Y + ++ A + + V+ C I+++ + ++ A+
Sbjct: 133 SVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFC--IVMRKYARAQKVDEAIYA 190
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
F+ K L PN+ F+ L+ LC+ V +A E E M PD +++L+
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGK 249
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V M+ G +P++ +Y ++ L A R EAL +V M P+
Sbjct: 250 EPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFI 309
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRN 381
+ LV R EE +M R G + ++ ++ C ++ +N
Sbjct: 310 YSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 15/270 (5%)
Query: 126 IKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLA 185
+K +H + +D A++ M + + + N V+ V V DVA +Y
Sbjct: 77 LKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRR 136
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG------ 239
+ ++ NILIK C +LS ++ F + K G +P+V TF+TL+HGLC +
Sbjct: 137 IPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEAL 196
Query: 240 -----MVE----EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
MVE EA ++M + G+ P V+ FN LI +++ MV KG
Sbjct: 197 ALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 291 FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
+ +V +Y ++ G+ AL ++ M P V + ++ LC+ +
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316
Query: 351 WALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
+ +M+ +G P + + +++ S R
Sbjct: 317 YLFSEMLEKGIAPNVFTYNCMIDGFCSFGR 346
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAF 245
++ D + +I LC+ G S A +F E + G+ PNV T++ ++ G C G +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 246 EWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL 305
L M + + PDV+ FN LI + D M+ + +P+ +Y ++YG
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 306 LDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
RF +A + + M S P V+F ++ CR +R +E LR++ R+G V
Sbjct: 412 CKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 366 GMWRHIVN 373
+ +++
Sbjct: 468 TTYNTLIH 475
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 108/233 (46%), Gaps = 1/233 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F T+I +Y A+R+D+ ++ L + + T+N +++ + A ++++
Sbjct: 435 FNTIIDVYCR-AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
V D NIL+ G C+ +L A+++F+ S ++ + ++ ++HG+C+ V
Sbjct: 494 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 553
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+EA++ + GV PDV +NV+I + M G P+ +Y +
Sbjct: 554 DEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
+ G L A +++E++ M S GF + K +CR E ++ LR
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLR 666
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 16/229 (6%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAA---------------VKVFDEFPKSGLEPNVRT 227
+L + D N L+ GLC + +S A V +FD+ + GL P V T
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
F+TL++GLC +G V EA + KM G+ DVV + ++ +L M
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
P+V Y ++ L +A + M+ +G P+ ++ ++ G C R
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGC 396
+ LR M+ + P + + +++ +V + + +E+ + DE+L C
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC-DEMLHRC 396
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/212 (20%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVL-VANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
+AV M + P TFN ++N L + R+ + A V + + + +D +
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTI 267
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ G+C+ G+ +A+ + + ++ ++P+V +S ++ LC+ G +A +M + G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
P+V +N +I +L M+ + P+V ++ ++ + + EA +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
+ + M+ R P V++ ++ G C+H R ++
Sbjct: 388 LCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
F+ + +Y A I+ ++ + P + +LN LV RL D ++++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMV 195
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+L V + N+L+ + G+ A K+ E + G+ P++ T++TL+ C+K M
Sbjct: 196 KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHF 255
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA ++ME+ GV P++V +N I + ++ N +Y ++
Sbjct: 256 EALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF-REIKDDVTANHVTYTTLI 314
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
G EAL + E M SRGF P V++ ++ LC R E + L +M +
Sbjct: 315 DGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIE 374
Query: 363 P 363
P
Sbjct: 375 P 375
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 125/305 (40%), Gaps = 1/305 (0%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
P CT L+ L L D + + + +K ++ + ++ + +KA
Sbjct: 164 LKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAE 223
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
+ L M + +P T+N +++V ++ A V + R V + N I G
Sbjct: 224 KLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGF 283
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
++G + A ++F E K + N T++TL+ G C ++EA E ME G P V
Sbjct: 284 SREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
V +N ++ +L M K P+ + ++ + + A++V +
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
M+ G S+K L+ G C+ E L M+ +GF P + +V+ ++ +
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462
Query: 381 NYEST 385
E T
Sbjct: 463 QDEIT 467
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 105/263 (39%), Gaps = 7/263 (2%)
Query: 115 RSFSDDF------FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVAN 168
R DD + TLI Y + ID+A+ M P T+N +L L +
Sbjct: 297 REIKDDVTANHVTYTTLIDGYCRM-NDIDEALRLREVMESRGFSPGVVTYNSILRKLCED 355
Query: 169 RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
A + +E D N LI C+ ++ +AVKV + +SGL+ ++ ++
Sbjct: 356 GRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 229 STLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
L+HG C+ +E A E L M + G P ++ L+ +L+ +
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 289 KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
+G +V Y+ ++ + ++ A + E M +G V V F + R + E
Sbjct: 476 RGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTE 535
Query: 349 VDWALRQMVRQGFVPRMGMWRHI 371
M + + + +++ I
Sbjct: 536 ASALFDVMYNRRLMVNLKLYKSI 558
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 107/211 (50%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P R+++ +++ L+ + E++ + +D NI+I G C+ G+++ A ++
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+E G EP V T+ +++ GL + ++EA+ E+ + + +VV+++ LI
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGK 669
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+L+ +++KG PN+ ++ +L L+ A+ EAL + M P+ V+
Sbjct: 670 VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVT 729
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ L+ GLC+ R+ + ++M +QG P
Sbjct: 730 YGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 122/292 (41%), Gaps = 12/292 (4%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETLLSMPDF 149
++ +L + LD + + + D+ F +LI V R +D A + M D
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR-VDDAYKVYEKMLDS 476
Query: 150 QCWPSRRTFNFVLNVLVAN-----RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
C RT + V L+ N R D ++Y+ D +N + + + G
Sbjct: 477 DC----RTNSIVYTSLIKNFFNHGRKED-GHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
E +F+E P+ R++S L+HGL + G E +E M++ G D +N
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYN 591
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
++I +L+ M KGF P V +Y V+ GL R EA + E S+
Sbjct: 592 IVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
+ V + L+ G + R +E L +++++G P + W +++ V
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALV 703
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 119/299 (39%), Gaps = 1/299 (0%)
Query: 63 NHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFF 122
P + AR+ F P + LI L A + + L + ++ D
Sbjct: 531 GEPEKGRAMFEEIKARR-FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
+ ++ +++KA + L M P+ T+ V++ L D A ++E A
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAK 649
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+E++ + LI G + G + A + +E + GL PN+ T+++L+ L + +
Sbjct: 650 SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEIN 709
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA + M++ P+ V + +LI M ++G P+ SY ++
Sbjct: 710 EALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMI 769
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
GL A EA + + + G VP + ++ GL R + + R+G
Sbjct: 770 SGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 131/314 (41%), Gaps = 6/314 (1%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDK 138
F P+ C ++ AN L + ++ Q +++ F F + TLI ++ V D
Sbjct: 129 FGPSVNTCIEMVLGCVKANKLREGYDVV-QMMRKFKFRPAFSAYTTLIGAFSAVNHS-DM 186
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
+ M + P+ F ++ D A + + +++ D N+ I
Sbjct: 187 MLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCID 246
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
+ G++ A K F E +GL+P+ T+++++ LC+ ++EA E E +EK P
Sbjct: 247 SFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVP 306
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+N +I +L+ KG P+V +Y +L L + EAL+V
Sbjct: 307 CTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVF 366
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
E M + P+ ++ L+ LCR + + M + G P + +V+ + K
Sbjct: 367 EEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD-RLCK 424
Query: 379 PRNYESTCVSLDEI 392
+ + C +E+
Sbjct: 425 SQKLDEACAMFEEM 438
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 114/297 (38%), Gaps = 46/297 (15%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVET 142
P E TS+I L AN LD + K R + + + + A + D+A
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE-----AAPRLAVEVDACCMNILI 197
L PS +N +L L D A +V+E AAP L+ NILI
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST------YNILI 384
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
LC+ G+L A ++ D K+GL PNVRT + ++ LC+ ++EA E+M+
Sbjct: 385 DMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCT 444
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
PD + F LI GL R +A +V
Sbjct: 445 PDEITFCSLID-----------------------------------GLGKVGRVDDAYKV 469
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
E M+ + + + L+ H R E+ + M+ Q P + + ++C
Sbjct: 470 YEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDC 526
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
H RR A+E F S +FN +L L A V+ A + + D+
Sbjct: 200 HYVRR---AIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDS 255
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
C NI+I G + GE+ KV E +SG P+ ++S L+ GL G + ++ E +
Sbjct: 256 CSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN 315
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
++ G PD V+N +I M+ + PN+ +Y +++ GL+ ++
Sbjct: 316 IKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 311 FIEALEVVEGMVSRGFVPS 329
+ALE+ E M+SRG +P+
Sbjct: 376 VSDALEIFEEMLSRGVLPT 394
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 7/221 (3%)
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
PD +C ++ V A E++E + V+ N L++ LC++ +
Sbjct: 184 PDLEC------LTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHV 237
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
SAA VF+ K + + +++ ++ G + G VEE + L++M + G PD + ++ L
Sbjct: 238 SAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHL 296
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I + D + KG P+ Y ++ + A+ F E++ M+
Sbjct: 297 IEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEEC 356
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGM 367
P+ ++ +LV GL + R+ + +M+ +G +P G+
Sbjct: 357 EPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/285 (20%), Positives = 120/285 (42%), Gaps = 17/285 (5%)
Query: 102 DPIHTLLHQTLKRRSFSDDFFFTL-----IKLYAHVARRIDKAVETLLSMPDFQCWPSRR 156
D + + Q LK +S +L I + A V R + + E +++ D W R
Sbjct: 88 DKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFD---WAVRE 144
Query: 157 --------TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
+++ +L L +L+ +V + V D C+ I + + +
Sbjct: 145 PGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRR 204
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+++F+E G++ + +F+ L+ LCE+ V A + + +K + D +N++I
Sbjct: 205 AIELFEESESFGVKCSTESFNALLRCLCERSHVSAA-KSVFNAKKGNIPFDSCSYNIMIS 263
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
VL MV GF P+ SY ++ GL R +++E+ + + +G VP
Sbjct: 264 GWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ ++ R +E R+M+ + P + + +V+
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVS 368
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 87/213 (40%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
RI+ +VE ++ P +N ++ ++ R +D + Y E + +
Sbjct: 305 RINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYS 364
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
L+ GL + ++S A+++F+E G+ P ++ + LC G A +K K
Sbjct: 365 KLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKA 424
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G + +L+ V D M G+ +V Y+ ++ GL A
Sbjct: 425 GCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENA 484
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
+ V+E + +GF P+ + +L L +TE
Sbjct: 485 VLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 77/178 (43%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
AR D+++ M D +C P+ T++ +++ L+ R A E++E V
Sbjct: 338 ARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGL 397
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+ +K LC G AA+ ++ + K+G + + L+ L G ++M+
Sbjct: 398 VTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQ 457
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
+ G DV V+ ++ V++ +RKGF PN Y ++ L+ + +
Sbjct: 458 ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNK 515
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 149/350 (42%), Gaps = 24/350 (6%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFC-TSLITK---LAHANLLDPIH 105
LT +QA T+ SL S ++ L + F F L+T LA+ NL H
Sbjct: 89 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNL-QKAH 147
Query: 106 TLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
++ L R+FS+ R+++AV ++ M + PS T N VL +
Sbjct: 148 EVMRCML--RNFSE-------------IGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIA 192
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
V L + A V++ V D+ +++ G + G++ A + + G P+
Sbjct: 193 VELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDN 252
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
T + ++ LCE G+V A + KM G P+++ F LI +L+
Sbjct: 253 ATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 312
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMV-SRGFVPSFVSFKQLVVGLCRHR 344
MVR G+ PNV ++ ++ GL +A + +V S + P+ ++ ++ G C+
Sbjct: 313 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED 372
Query: 345 RTEEVDWALRQMVRQGFVPRMGMWRHIVNC---AVSKPRNYESTCVSLDE 391
+ + +M QG P + + ++N A S R YE + DE
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 103/267 (38%), Gaps = 36/267 (13%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+I +A L M P T +L L N L + A + L + +
Sbjct: 232 KIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFT 291
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL------ 248
LI GLC++G + A ++ +E ++G +PNV T + L+ GLC++G E+AF
Sbjct: 292 SLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 249 ------------------------------EKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
+M++ G+ P+V + LI
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
++++M +GF PN+ +Y + L R EA E++ S G V++ L+
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRM 365
C+ + +M + GF M
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADM 498
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 3/273 (1%)
Query: 72 LHLYTARKD-FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSD-DFFFTLIKLY 129
L L R D + P TS+I + L+ L + ++ F + + + TLI +
Sbjct: 344 LFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGH 403
Query: 130 AHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVD 189
A +A E + M D P+ T+N ++ L A E+ A +E D
Sbjct: 404 CK-AGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
ILI+ C+Q +++ A+ F K+G E ++R + L+ C + ++E+ +
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
+ G+ P + +I M R G P+ +Y ++ GL
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKS 582
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
EA ++ E M+ RG P V+ L C+
Sbjct: 583 MVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 70/170 (41%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N I LC++ A ++ ++ GLE + T++ L+ C++ + +A + +M K
Sbjct: 432 NAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNK 491
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G D+ + N+LI + ++V G P +Y ++
Sbjct: 492 TGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDL 551
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
AL+ M G VP ++ L+ GLC+ +E M+ +G P
Sbjct: 552 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSP 601
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 35/243 (14%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA--- 209
P+ T+NF++N LV+ D A V+E ++ D N +IKG C+ G+ A
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279
Query: 210 --------------------------------VKVFDEFPKSGLEPNVRTFSTLMHGLCE 237
V ++ E + G++ FS ++ GLC+
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
+G + E + E M + G P+V ++ VLI +L M+ +GF P+V +
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
Y V+ GL R EAL+ G + + + L+ GL + R +E + +M
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459
Query: 358 RQG 360
+G
Sbjct: 460 EKG 462
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 14/245 (5%)
Query: 156 RTFNFVLNVLVANRLYDVAGE---------VYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+ F F + V AN L G+ V+ +E N L+ GL +
Sbjct: 179 KKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFV 238
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
+A +VF+ ++P++ T++T++ G C+ G ++A E L ME G D + + +
Sbjct: 239 DSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I + M KG ++ V+ GL + E V E M+ +G
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR-----N 381
P+ + L+ G + E+ L +M+ +GF P + + +VN R +
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 382 YESTC 386
Y TC
Sbjct: 419 YFHTC 423
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D ++++ GLC+ G + A+ F GL N +S+L+ GL + G V+EA
Sbjct: 396 DVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK-GFYPNVGSYQQVLYGLLD 307
E+M + G D +N LI + M + G V +Y +L G+
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
R EAL++ + M+ +G P+ F+ L GLC
Sbjct: 516 EHRNEEALKLWDMMIDKGITPTAACFRALSTGLC 549
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 133/322 (41%), Gaps = 5/322 (1%)
Query: 30 TQPNTDRDTAILARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCT 89
TQ ++ + R + D +T C + + S V L + P F +
Sbjct: 273 TQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF-S 331
Query: 90 SLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPD 148
+I L L+ +T+ +++ S + +T LI YA ++ A+ L M D
Sbjct: 332 LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGS-VEDAIRLLHRMID 390
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P T++ V+N L N + A + + + +++ + LI GL + G +
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV-VFNVLI 267
A ++F+E + G + ++ L+ + V+EA ++ME+ C V + +L+
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+ DMM+ KG P ++ + GL + + A ++++ + G +
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Query: 328 PSFVSFKQLVVGLCRHRRTEEV 349
+ + ++ LC+ R +E
Sbjct: 571 LD-AACEDMINTLCKAGRIKEA 591
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 108/261 (41%), Gaps = 13/261 (4%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPD----FQCWPSRR---TFNF-----VLNVLVANRLYD 172
LIKL + + K+ E + PD F CW ++ T N +++VL + D
Sbjct: 111 LIKLSPNFVSFVLKSDE-IREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVD 169
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
V + + N LIK + G + + V+ + ++G+EP + T++ LM
Sbjct: 170 RIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLM 229
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
+GL V+ A E ME + PD+V +N +I L M +G
Sbjct: 230 NGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHE 289
Query: 293 PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
+ +Y ++ F + + + M +G +F ++ GLC+ + E
Sbjct: 290 ADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
Query: 353 LRQMVRQGFVPRMGMWRHIVN 373
M+R+G P + ++ +++
Sbjct: 350 FENMIRKGSKPNVAIYTVLID 370
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 118/266 (44%), Gaps = 25/266 (9%)
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNF 160
L PI T ++ +L F TL +LY R+ A TL +M F P R +N
Sbjct: 49 LAPIKTRVYVSL---------FHTLFRLYLS-CERLYGAARTLSAMCTFGVVPDSRLWNS 98
Query: 161 VLNVLVANRL-YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS 219
+++ N L +D +Y V D +N+LI C+ G LS A+ +
Sbjct: 99 LIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLL---RNR 155
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
+ + T++T++ GLCE G+ +EA+++L +M K G+ PD V +N LI
Sbjct: 156 VISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI---------DGF 206
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF-IEAL-EVVEGMVSRGFVPSFVSFKQLV 337
V + + K + + + +L + + + A+ E MV GF P V+F ++
Sbjct: 207 CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSII 266
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVP 363
LC+ + E LR+M P
Sbjct: 267 NRLCKGGKVLEGGLLLREMEEMSVYP 292
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 117/262 (44%), Gaps = 21/262 (8%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
A I K ETLLS + SR+ +N ++ L + A V D
Sbjct: 659 ADAIFKTHETLLS---YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
N L+ G + A+ + ++G+ PNV T++T++ GL + G+++E +WL +M+
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
G+ PD +N LI + M+ G P +Y ++ + + +
Sbjct: 776 SRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA------------LRQMVRQ- 359
+A E+++ M RG P+ ++ ++ GLC+ +V+W L++MV +
Sbjct: 836 QARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEK 895
Query: 360 GFVP--RMGMWRHIVNCAVSKP 379
G++P + W ++ A SKP
Sbjct: 896 GYIPCNQTIYW---ISAAFSKP 914
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 28/250 (11%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
T+N V++ L + L D A + ++ + D N LI G C+ G A + DE
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 217 PK----------------------------SGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
+ SG +P+V TFS++++ LC+ G V E L
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+ME+ V P+ V + L+ + MV +G ++ Y ++ GL A
Sbjct: 283 REMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA 342
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
EA + + ++ VP+ V++ LV GLC+ ++ + QM+ + +P + +
Sbjct: 343 GDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Query: 369 RHIVNCAVSK 378
++N V K
Sbjct: 403 SSMINGYVKK 412
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%)
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
L M + +P+ T+ +++ L +Y A +Y + VD +L+ GL +
Sbjct: 282 LREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
G+L A K F + PNV T++ L+ GLC+ G + A + +M + V P+VV
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401
Query: 263 FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMV 322
++ +I +L M + PN +Y V+ GL A + A+E+ + M
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
G + LV L R R +EV ++ MV +G
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 101/258 (39%), Gaps = 39/258 (15%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAG--EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
P TFN ++N + D G ++++ ++ NI++ LC+ G++ A+
Sbjct: 571 PDIATFNIMMNS--QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAI 628
Query: 211 KVFDEFPKSGLEPNVRT-----------------------------------FSTLMHGL 235
+ ++ + PN+ T ++TL+ L
Sbjct: 629 HILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATL 688
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
C+ GM ++A + ME G PD V FN L+ +M+ G PNV
Sbjct: 689 CKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNV 748
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
+Y ++ GL DA E + + M SRG P ++ L+ G + + +
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE 808
Query: 356 MVRQGFVPRMGMWRHIVN 373
M+ G VP+ + +++
Sbjct: 809 MIADGLVPKTSTYNVLIS 826
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 1/175 (0%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N+LI G+ + G++ A + + G+EP++ TF+ +M+ ++G E +
Sbjct: 538 DVVSYNVLISGMLKFGKVGADW-AYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLW 596
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+KM+ CG+ P ++ N+++ +L+ M+ +PN+ +Y+ L
Sbjct: 597 DKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKH 656
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
KR + E ++S G S + L+ LC+ T++ + M +GF+P
Sbjct: 657 KRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 163 NVLVANRL-YDVAGE--VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS 219
NVL++ L + G Y+ +E D NI++ +QG+ +K++D+
Sbjct: 543 NVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV------------------ 261
G++P++ + + ++ LCE G +EEA L +M + P++
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 262 -----------------VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
V+N LI V+ M +GF P+ ++ +++G
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+AL M+ G P+ ++ ++ GL +EVD L +M +G P
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 124/293 (42%), Gaps = 3/293 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMP 147
T+L+ L A L ++ Q L++ + ++ +I Y +++AV L M
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM-LEEAVSLLRKME 426
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
D P+ T+ V++ L ++A E+ + + VE + ++ L+ L + G +
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
+ + G+ + +++L+ + G E A W E+M++ G+ DVV +NVLI
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
M KG P++ ++ ++ L++ + M S G
Sbjct: 547 SGMLKFGKVGADWAYKGMR-EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK 605
Query: 328 PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
PS +S +V LC + + EE L QM+ P + +R ++ + R
Sbjct: 606 PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 150/362 (41%), Gaps = 41/362 (11%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR--SFSDDFFFTLIKLYAHVARR 135
R++F +LI L A L ++ + + ++ S S L+K A+
Sbjct: 119 RRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGR-AKM 177
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY----------------- 178
+ KA+ +C P+ T+N V+ +L+ ++ EVY
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 179 ------------EAAPRLAVEVDACCMN-------ILIKGLCQQGELSAAVKVFDEFPKS 219
++A RL E+ CM L+ + G++ A+ +F+E ++
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
G P V T++ L+ GL + G V+EA+ + + M + G+ PDVV N L+
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI-EALEVVEGMVSRGFVPSFVSFKQLVV 338
V M P V SY V+ L ++K + E + M + PS ++ L+
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGCNH 398
G C+ R E+ L +M +GF P + ++N A+ K + YE+ E+ E +
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIN-ALGKAKRYEAANELFKELKENFGN 476
Query: 399 LT 400
++
Sbjct: 477 VS 478
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 2/215 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R++KA+ L M + P + ++N L + Y+ A E+++ V +
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++IK + G+LS AV +F+E G P+V ++ LM G+ + GM+ EA L KME+
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEEN 543
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G D+ N+++ + + + G P+ +Y +L A F EA
Sbjct: 544 GCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEA 603
Query: 315 LEVVEGMVSRGFVPSFVSFKQLV--VGLCRHRRTE 347
++ M +GF +++ ++ VG H + +
Sbjct: 604 ARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDD 638
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 25/264 (9%)
Query: 26 LWFCTQPNTDRDTAILARFQQK-------DWLTPKQATTLCNS-------------LNHP 65
+W CT +T I A F+ K W +A ++ S N
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 66 SSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR--SFSDDFFF 123
A+ LL K F P SLI L A + + L + LK + S +
Sbjct: 426 EKALLLLE-EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE-LKENFGNVSSRVYA 483
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+IK + ++ +AV+ M + P +N +++ +V + + A +
Sbjct: 484 VMIKHFGKCG-KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEE 542
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
D NI++ G + G A+++F+ SG++P+ T++TL+ GM EE
Sbjct: 543 NGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEE 602
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLI 267
A + +M+ G D + ++ ++
Sbjct: 603 AARMMREMKDKGFEYDAITYSSIL 626
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 127/288 (44%), Gaps = 4/288 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRS--FSDDFFFTLIKLYAHVARRIDKAVETLLSM 146
++ + LA + LL ++ R S+ F I LYA A +D ++ +
Sbjct: 84 SAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQ-ANMLDHSLRVFRDL 142
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL-AVEVDACCMNILIKGLCQQGE 205
F+ + ++ N +L + + Y A VY P++ +E D N +IK C+ G
Sbjct: 143 EKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGS 202
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
S++ + E + G++PN +F ++ G + +E + L M+ GV V +N+
Sbjct: 203 ASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNI 262
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
I +LD M+ G PN +Y +++G + F EA ++ + MV+RG
Sbjct: 263 RIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
P + L+ LC+ E ++ + + +VP + + +VN
Sbjct: 323 CKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 3/218 (1%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A EV + P+ E D L+ LC+ G + A K+F++ + N+R F++L++
Sbjct: 202 AIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLY 260
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
G C G + EA L +M + G PD+V + L+ +L M R+GF P
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
N Y ++ L R EA++V M V++ LV G C+ + ++ L
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 354 RQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDE 391
M+++G +P + HI+ A K ++E C+ L E
Sbjct: 381 DDMIKKGLMPSELTYMHIM-VAHEKKESFEE-CLELME 416
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 116/293 (39%), Gaps = 35/293 (11%)
Query: 120 DFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-------ANRLYD 172
+ F L++ +A A + KA+E L MP F P F +L+ L A +L++
Sbjct: 184 ELFVVLVQRFAS-ADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFE 242
Query: 173 ---------------------VAGEVYEAAPRL------AVEVDACCMNILIKGLCQQGE 205
G++ EA L E D L+ G G+
Sbjct: 243 DMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGK 302
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
++ A + + + G EPN ++ L+ LC+ +EEA + +ME+ DVV +
Sbjct: 303 MADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTA 362
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
L+ VLD M++KG P+ +Y ++ + F E LE++E M
Sbjct: 363 LVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIE 422
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
+ P + ++ C+ +E +M G P + + ++N S+
Sbjct: 423 YHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQ 475
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 3/228 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ L+ YA+ + D A + L M P+ + ++ L + A +V+
Sbjct: 290 YTNLLSGYANAGKMAD-AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
R E D L+ G C+ G++ V D+ K GL P+ T+ +M +K
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EE E +EKM + PD+ ++NV+I + + M G P V ++ +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIM 468
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGF--VPSFVSFKQLVVGLCRHRRTE 347
+ GL +EA + + MV+RG V + + K L+ + + ++ E
Sbjct: 469 INGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLE 516
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 115/266 (43%), Gaps = 3/266 (1%)
Query: 130 AHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVD 189
A +AR + VE + F P + ++N +L+ L+ + Y + VYE D
Sbjct: 200 AGLARDV---VEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPD 256
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
NI++ + G+ ++ DE K G P++ T++ L+H L A L
Sbjct: 257 VLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLN 316
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
M + GV P V+ F LI +D V+ G P+V Y ++ G +
Sbjct: 317 HMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGG 376
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWR 369
+A E+ + M +G +P+ ++ ++ G C + +E L++M +G P ++
Sbjct: 377 ELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYS 436
Query: 370 HIVNCAVSKPRNYESTCVSLDEILEG 395
+VN + + E+ V D + +G
Sbjct: 437 TLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 7/240 (2%)
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHVA-RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
+++ + F+ D I ++A+ + D+ L M P T+N +L+ L
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
A + + VE LI GL + G+L A DE K G P+V
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
++ ++ G G +E+A E ++M + G P+V +N +I +L M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
+G PN Y ++ L +A + +EA EVV+ MV +G + L+ L ++RR+
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG------HYVHLISKLKKYRRS 477
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 2/208 (0%)
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
A C ++L+K + GE A ++ DE K G TF+ L+ E G+ + E
Sbjct: 152 ANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFI 211
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
K + P +N ++ V + M+ GF P+V +Y V++
Sbjct: 212 KSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLG 271
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWR 369
+ +++ MV GF P ++ L+ L + L M G P + +
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 370 HIVNCAVSKPRNYESTCVSLDEILE-GC 396
+++ +S+ E+ +DE ++ GC
Sbjct: 332 TLID-GLSRAGKLEACKYFMDETVKVGC 358
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 91/179 (50%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ LC+ L A++V + SG+ P+ ++ L++ LC++G V A + +EKME G
Sbjct: 112 LLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ V +N L+ ++ +++KG PN +Y +L + EA+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
++++ ++ +G P+ VS+ L+ G C+ RT++ R++ +GF + + ++ C
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 3/232 (1%)
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
ANRL A V E + DA L+ LC++G + A+++ ++ G N
Sbjct: 119 ANRLKK-AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTV 177
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
T++ L+ GLC G + ++ +++E++ + G+ P+ ++ L+ +LD +
Sbjct: 178 TYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEI 237
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
+ KG PN+ SY +L G R +A+ + + ++GF + VS+ L+ LC R
Sbjct: 238 IVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRW 297
Query: 347 EEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGCNH 398
EE + L +M P + + ++N R ++ V L E+ +G NH
Sbjct: 298 EEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV-LKEMSKG-NH 347
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 98/257 (38%), Gaps = 37/257 (14%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ T++F+L R D A ++ + E + N+L+ G C++G A+ +
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
F E P G + NV +++ L+ LC G EEA L +M+ P VV +N+LI
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328
Query: 273 XXXXXXXXXV-------------------------------------LDMMVRKGFYPNV 295
V LD M+ + PN
Sbjct: 329 HGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
G+Y + + EA +++ + ++ + +K ++ LCR T L +
Sbjct: 389 GTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYE 448
Query: 356 MVRQGFVPRMGMWRHIV 372
M R GF P + ++
Sbjct: 449 MTRCGFDPDAHTYSALI 465
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 7/189 (3%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D V+ L M +C P+ T+N + ++ N E + L+ + C +
Sbjct: 368 KVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQ---EAFYIIQSLSNKQKCCTHD 424
Query: 195 I---LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
+I LC++G AA ++ E + G +P+ T+S L+ GLC +GM A E L M
Sbjct: 425 FYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIM 484
Query: 252 EKCGVC-PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
E+ C P V FN +I V +MMV K PN +Y ++ G+
Sbjct: 485 EESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDE 544
Query: 311 FIEALEVVE 319
A EV++
Sbjct: 545 LELAKEVLD 553
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 5/242 (2%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL--AVEVDACC 192
R ++A L M PS T+N ++N L + + A +V + + V A
Sbjct: 296 RWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATS 355
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCE-KGMVEEAFEWLEKM 251
N +I LC++G++ VK DE +PN T++ + LCE V+EAF ++ +
Sbjct: 356 YNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQSL 414
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
C + +I +L M R GF P+ +Y ++ GL F
Sbjct: 415 SNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMF 474
Query: 312 IEALEVVEGM-VSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
A+EV+ M S P+ +F +++GLC+ RRT+ MV + +P +
Sbjct: 475 TGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAI 534
Query: 371 IV 372
+V
Sbjct: 535 LV 536
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 72/160 (45%)
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
LS + + G +PNV + L++ LC+ +++A +E M G+ PD +
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
L+ +++ M G+ N +Y ++ GL ++L+ VE ++ +G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
P+ ++ L+ + R T+E L +++ +G P +
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNL 246
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 120/281 (42%), Gaps = 4/281 (1%)
Query: 86 PFC-TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVETL 143
P C +L++ LA L++ + L + L+ D + F TL+ Y + ++ A + +
Sbjct: 120 PKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVE-AKQYV 178
Query: 144 LSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQ 203
+ C P T+ + + D A +V++ + + LI GL +
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
++ A+ + + PNVRT++ L+ LC G EA ++M + G+ PD ++
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
VLI +L+ M+ G PNV +Y ++ G K +A+ ++ M+
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLE 357
Query: 324 RGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
+ VP +++ L+ G C + L M G VP
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 97/252 (38%), Gaps = 36/252 (14%)
Query: 156 RTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG----------- 204
+ +N +L+ L L + +Y V D N L+ G C+ G
Sbjct: 121 KCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTW 180
Query: 205 ------------------------ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
E+ AA KVF E ++G N +++ L++GL E
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKK 240
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++EA L KM+ CP+V + VLI + M G P+ Y
Sbjct: 241 IDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTV 300
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
++ EA ++E M+ G +P+ +++ L+ G C+ + + L +M+ Q
Sbjct: 301 LIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQN 359
Query: 361 FVPRMGMWRHIV 372
VP + + ++
Sbjct: 360 LVPDLITYNTLI 371
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 114/275 (41%), Gaps = 36/275 (13%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS R +N V++ LV + D+A ++ + D NILI G+C++G + A+++
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV------------ 260
+ + G PNV T++ L+ G G V+EA + LE M + P+
Sbjct: 238 VKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Query: 261 -----------------------VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
V ++ ++ L + +G+ P+ +
Sbjct: 298 CLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSST 357
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
+ + LL +E + +G VSRG P F + LV L +R E D L+QM
Sbjct: 358 FNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMG 417
Query: 358 RQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEI 392
G + + + +++C + K R E+ + L E+
Sbjct: 418 VDGLLSSVYSYNAVIDC-LCKARRIENAAMFLTEM 451
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 12/202 (5%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL------AV 186
ARRI+ A L M D P+ TFN L+ Y V G+V + L
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSG------YSVRGDVKKVHGVLEKLLVHGF 491
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
+ D +++I LC+ E+ A F E + G+EPN T++ L+ C G + + +
Sbjct: 492 KPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVK 551
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
KM++ G+ PD+ +N I +L M+R G P+ +Y ++ L
Sbjct: 552 LFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALS 611
Query: 307 DAKRFIEALEVVEGMVSRGFVP 328
++ R EA E+ + G VP
Sbjct: 612 ESGRESEAREMFSSIERHGCVP 633
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
+V+ L ++ N +I L + L A F + G +P+ T++ L+HG+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
C+KG+V+EA +++ME+ G P+V + +LI L+MM + PN
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
+ + ++G+ +A EV+ G + + V + ++ L + +E LR+
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 356 MVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLD 390
+ +G++P + ++C + K + TC D
Sbjct: 346 IGERGYIPDSSTFNAAMSCLL-KGHDLVETCRIFD 379
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 78/191 (40%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +I LC+ + A E G+ PN+ TF+T + G +G V++ LEK+
Sbjct: 429 NAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLV 488
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G PDV+ F+++I M+ G PN +Y ++
Sbjct: 489 HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++++ M G P ++ + C+ R+ ++ + L+ M+R G P + ++
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 374 CAVSKPRNYES 384
R E+
Sbjct: 609 ALSESGRESEA 619
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/233 (19%), Positives = 96/233 (41%), Gaps = 2/233 (0%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P TFN ++ L+ +++ V+ +L++ L S +
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ GL +V +++ ++ LC+ +E A +L +M+ G+ P++V FN +
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
VL+ ++ GF P+V ++ ++ L AK +A + + M+ G P+ ++
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSKPRNYE 383
+ L+ C T+ +M G P + + + C + K + E
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
E+ ++ R++ E+ M +LI + G VF + G++P+ R ++ ++ L
Sbjct: 135 EIRDSGYRISDEL----MCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
+ ++ A+ ++M G PD +N+LI ++ M ++G PNV
Sbjct: 191 VKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNV 250
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
+Y ++ G L A R EAL+ +E M R P+ + + V G+ R
Sbjct: 251 FTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFR 297
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%)
Query: 104 IHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLN 163
+H +L + L D F+LI A+ I A + M ++ P+ T+N ++
Sbjct: 479 VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIR 538
Query: 164 VLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEP 223
+ D + +++ + D N I+ C+ ++ A ++ + GL+P
Sbjct: 539 SCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKP 598
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
+ T+STL+ L E G EA E +E+ G PD
Sbjct: 599 DNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 160/391 (40%), Gaps = 16/391 (4%)
Query: 13 TLVPPLTPHHKPRLWFCT---QPNTDRDTAILARFQQKDW-LTPKQATTLCNSLNHPSSA 68
T + P+ H R+ CT Q D+ ++++ + LT + +CN+
Sbjct: 36 TTITPINQDHLLRV--CTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPLSWRP 93
Query: 69 VTLLHLY--TARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLI 126
V LY T DF T ++ + ++ +D L + KR +D F ++
Sbjct: 94 VHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTFRIVL 153
Query: 127 KLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAV 186
K A AR + K V M F + T N + L +L + A V+ +
Sbjct: 154 KTLAS-ARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIKLKEF-I 211
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
+ D +I+G C G+L A K+++ G + ++ +M L +K +EA +
Sbjct: 212 KPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASK 271
Query: 247 WLEKM-EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL 305
M K G D + V+I V D M +G Y + ++ ++YGL
Sbjct: 272 VFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGL 331
Query: 306 LDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
L +R +EA +VEG+ + P + L+ GL + +R E R+M+++G P M
Sbjct: 332 LVKRRVVEAYGLVEGVEN----PDISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIM 387
Query: 366 GMWRHIVNCAVS-KPRNYESTCVSLDEILEG 395
+ ++ + + R V+ D I G
Sbjct: 388 HTYLMLLQGHLGRRGRKGPDPLVNFDTIFVG 418
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 114/272 (41%), Gaps = 8/272 (2%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
F+P+E +SL+ L ++ L+ + + + F + + R+ +A
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVA----GEVYEAAPRLAVEVDACCMNIL 196
M P+ T++ ++++ D A GE+ + +L+V N L
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP----YNSL 443
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I G C+ G++SAA E LEP V T+++LM G C KG + +A +M G+
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
P + F L+ + + M PN +Y ++ G + +A E
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
++ M +G VP S++ L+ GLC + E
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASE 595
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 114/285 (40%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDK 138
K PT TSL+ ++ L H+ + + FT + A I
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
AV+ M ++ P+R T+N ++ A E + + D LI
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
GLC G+ S A D K E N ++ L+HG C +G +EEA ++M + GV
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
D+V + VLI +L M +G P+ Y ++ F EA +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ M++ G VP+ V++ ++ GLC+ E + +M VP
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 135/325 (41%), Gaps = 20/325 (6%)
Query: 58 LCNSLNHPSSAVTLLHLYTARKDFN-PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRS 116
L +++ P + + + F+ T FC LI L ANL P +LL L R
Sbjct: 77 LIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCI-LIHALVKANLFWPASSLLQTLLLRAL 135
Query: 117 FSDDFFFTL------------------IKLYAHVARRIDKAVETLLSMPDFQCWPSRRTF 158
D F L I+ Y R +D + + + P RT
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
+ +L+ LV R + +A E++ + + D +I+ LC+ +LS A ++
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEA 255
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
+G + N+ ++ L+ GLC+K V EA + + + PDVV + L+
Sbjct: 256 TGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEI 315
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
++D M+ F P+ + ++ GL + EAL +V+ +V G P+ + L+
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALID 375
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVP 363
LC+ R+ E + +M + G P
Sbjct: 376 SLCKGRKFHEAELLFDRMGKIGLRP 400
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/239 (20%), Positives = 113/239 (47%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+I++A+ + + DF P+ +N +++ L R + A +++ ++ + + +
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI C++G+L A+ E +GL+ +V +++L++G C+ G + A ++ +M
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ P VV + L+ + M KG P++ ++ +L GL A +A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+++ M P+ V++ ++ G C + L++M +G VP +R +++
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 128/307 (41%), Gaps = 18/307 (5%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFS------DDFFFTLIK----LYAHVARRI---- 136
+ITK++ + + LLH +K R F +D I+ +Y V R +
Sbjct: 182 MITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELK 241
Query: 137 --DKAVETLLSMPDFQCWPSRRTFNFVLNVLVA-NRLYDVAGEVYEAAPRLAVEVDACCM 193
+A E + M C + +N +++ L ++++ G + A + ++ D
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-DLKPDVVTY 300
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
L+ GLC+ E +++ DE P+ S+L+ GL ++G +EEA ++++
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
GV P++ V+N LI + D M + G PN +Y ++ +
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
AL + MV G S + L+ G C+ + + +M+ + P + + ++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 374 CAVSKPR 380
SK +
Sbjct: 481 GYCSKGK 487
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 1/183 (0%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I + G+ A ++D G PN T++ +++GLC+ G V EA KM+
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
P+ V + + L + KG N +Y ++ G R EA
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP-RMGMWRHIVNC 374
E++ M+ G P +++ ++ LCR ++ M +G P R+ I C
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 375 AVS 377
V+
Sbjct: 868 CVA 870
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 20/194 (10%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA-------PRLAVEVD---ACCMNI 195
M + C P+ T+ V+N L AG V EA P +V C ++I
Sbjct: 708 MINEGCVPNEVTYTAVINGLCK------AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L KG + ++ AV++ + K GL N T++ L+ G C +G +EEA E + +M G
Sbjct: 762 LTKG---EVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V PD + + +I + + M KG P+ +Y +++G A +A
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Query: 316 EVVEGMVSRGFVPS 329
E+ M+ +G +P+
Sbjct: 878 ELRNEMLRQGLIPN 891
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 5/284 (1%)
Query: 92 ITKLAHANLLDPIHTLLHQTLKRRSFSDD-FFFTLIKLYAHVARRIDKAVETLLSMPDFQ 150
+ +LA I TL+ ++ F+ TLI+ Y A + A+ T M +
Sbjct: 74 VRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQ-ASMFNHAMRTFEQMDQYG 132
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV--DACCMNILIKGLCQQGELSA 208
S +FN +LN + ++ +D ++++ P+ ++ D ILIK C G
Sbjct: 133 TPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEK 192
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+++ + G+E F+T++ L +KG +E A +M K G D +NV I
Sbjct: 193 AIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI- 251
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+++ M G P+ SY ++ + EA +V EG+ P
Sbjct: 252 MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAP 311
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ +F+ L+ LC R E+ ++ V +P +H+V
Sbjct: 312 NAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLV 355
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 131/331 (39%), Gaps = 41/331 (12%)
Query: 79 KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDK 138
++F P F T LI+ L A+L + L++ + ++ + +++ +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGR 355
Query: 139 AVETLLSMPDFQCWPSRRTFN-------------------------------FVLNVLVA 167
L M C+PS + FN V N+L+
Sbjct: 356 CKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 168 N----------RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
+ L D+A + Y V ++ ++ + LC G+ A V E
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
G P+ T+S +++ LC +E AF E+M++ G+ DV + +++
Sbjct: 476 GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIE 535
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
+ M G PNV +Y +++ L AK+ A E+ E M+S G +P+ V++ L+
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
G C+ + E+ +M VP + M+
Sbjct: 596 DGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D + ++ LC ++ A +F+E + GL +V T++ ++ C+ G++E+A +W
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+M + G P+VV + LI + + M+ +G PN+ +Y ++ G A
Sbjct: 542 NEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKA 601
Query: 309 KRFIEALEVVEGMVSRGFV----------------PSFVSFKQLVVGLCRHRRTEEVDWA 352
+ +A ++ E M V P+ V++ L+ G C+ R EE
Sbjct: 602 GQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKL 661
Query: 353 LRQMVRQGFVPRMGMWRHIVN--CAVSK 378
L M +G P ++ +++ C V K
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 16/257 (6%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
A + +KA + M P T++ VLN L ++A ++E R + D
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYT 520
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
I++ C+ G + A K F+E + G PNV T++ L+H + V A E E M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXV------------LDMMVRK----GFYPNVG 296
G P++V ++ LI + +DM ++ PNV
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 297 SYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+Y +L G + R EA ++++ M G P+ + + L+ GLC+ + +E +M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 357 VRQGFVPRMGMWRHIVN 373
GF + + +++
Sbjct: 701 SEHGFPATLYTYSSLID 717
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 114/283 (40%), Gaps = 46/283 (16%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A+E L + DF+ PSR T+N ++ + D A ++ + +D +
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
LC+ G+ A+ + + P+ ++ L+ GLCE + EEA ++L +M P
Sbjct: 279 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+VV ++ L+ VL+MM+ +G YP+ + +++ + A +++
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDW--------------------------- 351
+ MV G +P +V + L+ +C + + D
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455
Query: 352 --------------ALRQMVRQGFVPRMGMWRHIVN--CAVSK 378
+R+M+ QGF+P + ++N C SK
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ T+ +L+ + + A ++ +A E + + LI GLC+ G+L A +V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
E + G + T+S+L+ + + A + L KM + P+VV++ +I
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
++ MM KG PNV +Y ++ G + LE++E M S+G P++V+
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
++ L+ C++ + L +M + + +R ++
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI 856
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ G C+ + A K+ D G EPN + L+ GLC+ G ++EA E +M + G
Sbjct: 645 LLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHG 704
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ ++ LI VL M+ PNV Y +++ GL + EA
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
++++ M +G P+ V++ ++ G + E L +M +G P +R +++
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLID 822
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 2/213 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++D+A E M + + T++ +++ + D+A +V + +
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+I GLC+ G+ A K+ + G +PNV T++ ++ G G +E E LE+M
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
GV P+ V + VLI +L+ M + + + Y++V+ G K FIE+
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIES 866
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
L +++ + P ++ L+ L + +R E
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLE 899
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 101/246 (41%), Gaps = 5/246 (2%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +LI Y V R+ D A + L M + C P+ + +++ L D A ++ +
Sbjct: 712 YSSLIDRYFKVKRQ-DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ + +I G G++ +++ + G+ PN T+ L+ C+ G +
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ A LE+M++ + +I +LD + + P + Y+ +
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVI--EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLL 888
Query: 302 LYGLLDAKRFIEALEVVE--GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
+ L+ A+R AL ++E S V ++ L+ LC + E +M ++
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKK 948
Query: 360 GFVPRM 365
G +P M
Sbjct: 949 GVIPEM 954
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 1/203 (0%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ G C+ EL A +F K G++PN+ ++ L+HG C+ G + EA L +ME
Sbjct: 310 LVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLN 369
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ PDV + +LI + M + +P+ +Y +++G +AL
Sbjct: 370 LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQAL 429
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
++ M + G P+ ++F L+ G C R + +M +G VP + + +++ A
Sbjct: 430 DLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALID-A 488
Query: 376 VSKPRNYESTCVSLDEILEGCNH 398
K N + ++LE H
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIH 511
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 103/258 (39%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+AV L M P T+ ++N L A +++ + + N LI
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G C++ + A+ + E SG+EPN+ TFSTL+ G C ++ A +M G+
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
PDVV + LI + M+ G +PN ++ ++ G R A++
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVS 377
+ + + V F L+ GLC++ M G P + + ++ +
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 378 KPRNYESTCVSLDEILEG 395
+ R ++ + D I G
Sbjct: 597 EKRITDTMMLQCDMIKTG 614
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 124/314 (39%), Gaps = 7/314 (2%)
Query: 63 NHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLA-HANLLDPIHTLLH--QTLKRRSFSD 119
N S ++H+ T + SLI +L H+ + H L + + ++ FS
Sbjct: 73 NDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSI 132
Query: 120 DFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE 179
F LI + + E L + +C P + +LN LV R +D Y+
Sbjct: 133 GVFSLLIMEFLEMGL----FEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQ 188
Query: 180 AAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
+ D +L + +QG S K+ DE G++PNV ++ + LC
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
+EEA + E M+K GV P++ ++ +I + ++ PNV +
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
++ G A+ + A + MV G P+ + L+ G C+ E L +M
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 360 GFVPRMGMWRHIVN 373
P + + ++N
Sbjct: 369 NLSPDVFTYTILIN 382
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 101/225 (44%), Gaps = 3/225 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNV-LVANRLYDVAGEVYEA 180
F TL+ + AR + A + M F P+ +N +++ + + + G + E
Sbjct: 307 FGTLVDGFCK-ARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
L + D ILI GLC + +++ A ++F + + P+ T+++L+HG C++
Sbjct: 366 ES-LNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+E+A + +M GV P+++ F+ LI + M KG P+V +Y
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
++ EAL + M+ G P+ +F LV G + R
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+ V+ + N LI G C+ G + AV + E L P+V T++ L++GLC + V
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA +KM+ + P +N LI + M G PN+ ++ ++
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
G + + A+ + M +G VP V++ L+ + +E M+ G
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 363 P 363
P
Sbjct: 512 P 512
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P + T+N ++++L + D A + A +D + ++ LC++G +S A +
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 213 FDEFPKSG-LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
+E G P+V T++ +++G C G V++A + L+ M G P+ V + L+
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+++M + PN +Y +++GL + EA +VV MV +GF P V
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
L+ LCR RT E + + + +G
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKG 589
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 2/231 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA-NRLYDVAGEVYEAAPRLAVEVDACCM 193
R+++A+E L M C P + ++ ++ L R+ +V + + A + D
Sbjct: 327 RVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTY 386
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N LI L + A+ + + G + +S ++H LC++G + EA + + +M
Sbjct: 387 NTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLS 446
Query: 254 CGVCP-DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
G CP DVV + ++ +L +M G PN SY +L G+ + +
Sbjct: 447 KGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 506
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
EA E++ + P+ +++ ++ GL R + E +R+MV +GF P
Sbjct: 507 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 3/183 (1%)
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
G+L A+KV ++G+EPN+ +T + +E+A +LE+M+ G+ P+VV +
Sbjct: 256 GQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTY 315
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
N +I +L+ M KG P+ SY ++ L KR +E ++++ M
Sbjct: 316 NCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAK 375
Query: 324 R-GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF-VPRMGMWRHIVNCAVSKPRN 381
G VP V++ L+ L +H +E W L+ +GF + ++G + IV+ + R
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG-YSAIVHALCKEGRM 434
Query: 382 YES 384
E+
Sbjct: 435 SEA 437
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 5/277 (1%)
Query: 112 LKRRS-FSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANR 169
+KRR + F+ + + A ++ A++ L M P+ N ++V V ANR
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 170 LYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFS 229
L + A E + + + N +I+G C + A+++ ++ G P+ ++
Sbjct: 293 L-EKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYY 351
Query: 230 TLMHGLCEKGMVEEAFEWLEKMEK-CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
T+M LC++ + E + ++KM K G+ PD V +N LI L
Sbjct: 352 TIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQE 411
Query: 289 KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV-PSFVSFKQLVVGLCRHRRTE 347
KGF + Y +++ L R EA +++ M+S+G P V++ +V G CR +
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVD 471
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
+ L+ M G P + ++N ++ E+
Sbjct: 472 KAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D ++ G C+ GE+ A K+ G +PN +++ L++G+C G EA E +
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
E+ P+ + ++V++ V+ MV KGF+P +L L
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
R EA + +E +++G + V+F ++ G C++ +E+D AL
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN---DELDAAL 614
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 2/166 (1%)
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+N+L++ LC+ G A K +E G NV F+T++HG C+ ++ A L+ M
Sbjct: 562 INLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY 621
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
DV + L+ ++ M+ KG P +Y+ V++ +
Sbjct: 622 LINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVD 681
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR 358
+ + ++E M+SR + + Q++ LC + EE D L +++R
Sbjct: 682 DLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLR 725
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 148/353 (41%), Gaps = 7/353 (1%)
Query: 11 ARTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQAT--TLCNSL-NHPSS 67
++ +P ++ + C + ++ + ++ L P Q T TL + L H +
Sbjct: 340 SKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHA 399
Query: 68 AVTLLHLYTAR-KDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFT 124
L L A+ K F + ++++ L + L+++ L + D +
Sbjct: 400 DEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
++ + + +DKA + L M P+ ++ +LN + A E+ +
Sbjct: 460 VVNGFCRLGE-VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEH 518
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++ ++++ GL ++G+LS A V E G P + L+ LC G EA
Sbjct: 519 WWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEA 578
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
+++E+ G +VV F +I VLD M + +V +Y ++
Sbjct: 579 RKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDT 638
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
L R EA E+++ M+ +G P+ V+++ ++ C+ + +++ L +M+
Sbjct: 639 LGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMI 691
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
Query: 190 ACCMNIL-----IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
C +N++ I G CQ EL AA+ V D+ +V T++TL+ L +KG + EA
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 648
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
E ++KM G+ P V + +I +L+ M+ + + Y QV+
Sbjct: 649 TELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEK 706
Query: 305 LLDAKRFIEA 314
L + EA
Sbjct: 707 LCVLGKLEEA 716
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
F+ ++V V + A VY+ + + ILIKGLCQ G + A ++ +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
K G+EP++ T+S+L+ G C+ G + F E M K G PDVV++ VL+
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
M+ + NV + ++ G RF EAL+V M G P +F +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ R EE + +M + G P
Sbjct: 538 MRVSIMEGRLEEALFLFFRMFKMGLEP 564
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G C++GE+ A +F + G+EP++ +STL+ G + GM+ + + G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V DVVVF+ I V M+ +G PNV +Y ++ GL R EA
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ ++ RG PS V++ L+ G C+ M++ G+ P + ++ +V+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 114/263 (43%), Gaps = 1/263 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F TLI + +D+A + M P ++ +++ + + +++ A
Sbjct: 289 FCTLINGFCKRGE-MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
V++D + I + G+L+ A V+ G+ PNV T++ L+ GLC+ G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EAF ++ K G+ P +V ++ LI + + M++ G+ P+V Y +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ GL + A+ M+ + + V F L+ G CR R +E R M G
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 362 VPRMGMWRHIVNCAVSKPRNYES 384
P + + ++ ++ + R E+
Sbjct: 528 KPDVATFTTVMRVSIMEGRLEEA 550
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAP--RLAVE----VDACCMNILIKGLCQQGELSAAVKV 212
FVL+ L GEV +A RL +E V N ++KGL ++ A ++
Sbjct: 221 GFVLDALFCK------GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRL 273
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
G PNV TF TL++G C++G ++ AF+ + ME+ G+ PD++ ++ LI
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ + KG +V + + + + A V + M+ +G P+ V+
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ L+ GLC+ R E Q++++G P + + +++
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
N V+++L + A + + +E D N +I G C L A ++F+
Sbjct: 605 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 664
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
+ PN T + L+H LC+ ++ A M + G P+ V + L+
Sbjct: 665 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 724
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+ + M KG P++ SY ++ GL R EA + + +P V++ L+
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVP 363
G C+ R E M+R G P
Sbjct: 785 GYCKVGRLVEAALLYEHMLRNGVKP 809
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 87/195 (44%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
RI+ A + ++ + + P T+N ++ + R D A ++E + +
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI LC+ ++ A+++F + G +PN T+ LM + +E +F+ E+M++
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 735
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ P +V ++++I + + P+V +Y ++ G R +EA
Sbjct: 736 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 795
Query: 315 LEVVEGMVSRGFVPS 329
+ E M+ G P
Sbjct: 796 ALLYEHMLRNGVKPD 810
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 101/241 (41%)
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
FT + + + R+++A+ M P + +++ + + ++++
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQ 593
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
R + D N++I L + + A K F+ + +EP++ T++T++ G C ++
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA E ++ P+ V +LI + +M KG PN +Y ++
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+ + ++ E M +G PS VS+ ++ GLC+ R +E Q + +
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 363 P 363
P
Sbjct: 774 P 774
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%)
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++ ++ N LI G C+ A+KVF G++P+V TF+T+M +G +EEA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
+M K G+ PD + + LI + D+M R ++ V++
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
L R +A + ++ P V++ ++ G C RR +E +
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 8/261 (3%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYAHVARRIDKAVETLL--S 145
++LI A +L H L Q L + D F+ I +Y D A +++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG---DLATASVVYKR 381
Query: 146 MPDFQCWPSRRTFNFVLNVLVAN-RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
M P+ T+ ++ L + R+Y+ G +Y + +E + LI G C+ G
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFG-MYGQILKRGMEPSIVTYSSLIDGFCKCG 440
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
L + ++++ K G P+V + L+ GL ++G++ A + KM + +VVVFN
Sbjct: 441 NLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFN 500
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
LI V +M G P+V ++ V+ + R EAL + M
Sbjct: 501 SLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM 560
Query: 325 GFVPSFVSFKQLVVGLCRHRR 345
G P +++ L+ C+H +
Sbjct: 561 GLEPDALAYCTLIDAFCKHMK 581
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 134 RRIDKA--VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDAC 191
RR+D+A + LL + F P+ T +++VL N D A ++ + +A
Sbjct: 650 RRLDEAERIFELLKVTPFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
L+ + ++ + K+F+E + G+ P++ ++S ++ GLC++G V+EA +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPN 294
+ PDVV + +LI + + M+R G P+
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ TF ++N D A ++++ + +E D + LI G + G L K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
F + G++ +V FS+ + + G + A ++M G+ P+VV + +LI
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ ++++G P++ +Y ++ G + E M+ G+ P V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 333 FKQLVVGLCRH 343
+ LV GL +
Sbjct: 464 YGVLVDGLSKQ 474
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 140 VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKG 199
V L+ P S + N +N L R + A + RL V D N LIKG
Sbjct: 2 VRGLMKFPGI----STKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKG 57
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
+ + A V ++G+EP+V T+++L+ G + M+ + ++M G+ PD
Sbjct: 58 YTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPD 117
Query: 260 VVVFNVLIXXXXXXXXXXXXXXVLDMMVR-KGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
+ +N L+ +L + G P + +Y +L L + A+E+
Sbjct: 118 MWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF 177
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ + SR P +++ L+ GLC+ RR VDW +R++ + G+ P
Sbjct: 178 KHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTP 221
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 3/240 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TLIK Y ID+A M + P T+N +++ N + + ++++
Sbjct: 51 YNTLIKGYTRFIG-IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM 109
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE-FPKSGLEPNVRTFSTLMHGLCEKGM 240
+ D N L+ + G A K+ E +GL P + T++ L+ LC+ G
Sbjct: 110 LHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+ A E + + K V P+++ +N+LI ++ + + G+ PN +Y
Sbjct: 170 TDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTT 228
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
+L KR + L++ M G+ + +V L + R EE + ++VR G
Sbjct: 229 MLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 6/243 (2%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
LI LY V + I KA+E M + + +T++ ++N V + + A V+E +
Sbjct: 490 LINLYTKVGK-ISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKE 548
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++ D N +I C G + A++ E K P RTF ++HG + G + +
Sbjct: 549 GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
E + M +CG P V FN LI +LD M G N +Y +++ G
Sbjct: 609 LEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV-----DWALRQMVRQ 359
+A E + + G +++ L+ C+ R + + + R + R
Sbjct: 669 YASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRN 728
Query: 360 GFV 362
FV
Sbjct: 729 SFV 731
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 116/291 (39%), Gaps = 1/291 (0%)
Query: 98 ANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRT 157
N+ I T+ R + F +I YA + +++E M C P+ T
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD-MRRSLEVFDMMRRCGCVPTVHT 626
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
FN ++N LV R + A E+ + V + +++G G+ A + F
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
GL+ ++ T+ L+ C+ G ++ A ++M + + V+N+LI
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
++ M ++G P++ +Y + A A + +E M + G P+ ++ L+
Sbjct: 747 EAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
G R E+ +M G P ++ ++ +S+ E+ S
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYS 857
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 1/221 (0%)
Query: 121 FFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
+ +LI YA V R +D+A+ + M + S T++ ++ + A ++
Sbjct: 346 IYTSLIHAYA-VGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE 404
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
A R+ ++A +I CQ + A + E + G++ + + T+M G
Sbjct: 405 AKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD 464
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++ +++++CG P VV + LI V +M +G N+ +Y
Sbjct: 465 EKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSM 524
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
++ G + K + A V E MV G P + + ++ C
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFC 565
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 104/260 (40%), Gaps = 15/260 (5%)
Query: 122 FFTLIKLYAHVARRID--KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE 179
F ++K Y RR D +A ET M P+ R + +++ R D A
Sbjct: 312 FGLMVKFYG---RRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVR 368
Query: 180 AAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
+E+ ++++ G + G AA FDE + N + +++ C+
Sbjct: 369 KMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTC 428
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
+E A + +ME+ G+ + +++ ++ V + GF P V +Y
Sbjct: 429 NMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYG 488
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA-----LR 354
++ + +ALEV M G + ++ ++ G + + DWA
Sbjct: 489 CLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK-----DWANAFAVFE 543
Query: 355 QMVRQGFVPRMGMWRHIVNC 374
MV++G P + ++ +I++
Sbjct: 544 DMVKEGMKPDVILYNNIISA 563
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 99/219 (45%), Gaps = 1/219 (0%)
Query: 121 FFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
+ T++ Y VA K + + + P+ T+ ++N+ A EV
Sbjct: 451 IYHTMMDGYTMVADE-KKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRV 509
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
V+ + +++I G + + + A VF++ K G++P+V ++ ++ C G
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
++ A + +++M+K P F +I V DMM R G P V ++
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
++ GL++ ++ +A+E+++ M G + ++ +++ G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQG 668
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 117/271 (43%), Gaps = 7/271 (2%)
Query: 59 CNSLNHP---SSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR 115
C S+ H ++ + T+R D++ P + + L+ + L +K R
Sbjct: 121 CGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSR 180
Query: 116 S--FSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDV 173
+ S + F LI+ Y A +AV M D+ C P + F+ V++ L R
Sbjct: 181 NVEISIETFTILIRRYVR-AGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 239
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A +++ + E D L++G C+ GE+S A KVF E +G+EPNV T+S ++
Sbjct: 240 AQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
LC G + A + M G P+ + FN L+ V + M + G P
Sbjct: 299 ALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
+ +Y ++ + A++V+ M+ +
Sbjct: 359 DTITYNFLIEAHCRDENLENAVKVLNTMIKK 389
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 1/231 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+I +A + M D C P+ TFN ++ V V + +VY +L E D N
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI+ C+ L AVKV + K E N TF+T+ + +K V A KM +
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
P+ V +N+L+ + M K PNV +Y+ ++ + A
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNA 484
Query: 315 LEVVEGMV-SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
++ + MV + PS ++ ++ L R + ++ + + +M+++G V R
Sbjct: 485 YKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVAR 535
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
+N ++++ R +D+A + + VE+ ILI+ + G S AV F+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
G P+ FS ++ L K EA + + + K PDV+V+ L+
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
V M G PNV +Y V+ L + A +V M+ G P+ ++F L+
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVP 363
+ RTE+V QM + G P
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEP 358
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 93/207 (44%), Gaps = 2/207 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F L++++ A R +K ++ M C P T+NF++ + + A +V
Sbjct: 328 FNNLMRVHVK-AGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ EV+A N + + + ++ +++ A +++ + ++ EPN T++ LM
Sbjct: 387 IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKST 446
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV-RKGFYPNVGSYQQ 300
+ + ++M+ V P+V + +L+ + MV K P++ Y+
Sbjct: 447 DMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEM 506
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFV 327
VL L A + + E+VE M+ +G V
Sbjct: 507 VLAQLRRAGQLKKHEELVEKMIQKGLV 533
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 118/289 (40%), Gaps = 41/289 (14%)
Query: 131 HVARRIDKAVETLLSMPDFQCW---PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVE 187
H ++ K VE L D + PS T+N +++ L + + A + E +
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 441
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTL---------------- 231
D L+KG + G LS A +V+DE + G++P+ ++T
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 232 --------------------MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
+ GLC+ G + +A E+ K+ + G+ PD V + +I
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+ D M+RK YP+V +Y ++YG A R +A + M RG P+ +
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV--NCAVSK 378
+ L+ G+C+ +E L +M +G P + ++ NC K
Sbjct: 622 THNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEK 670
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 9/221 (4%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE--AAPRLAVEVDACCMNILIKGLCQQ 203
M + +P+ T+N + L D A E+ AAP D N L+ G +
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP------DVVSYNTLMHGYIKM 387
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
G+ A +FD+ + P++ T++TL+ GLCE G +E A E+M + PDV+ +
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
L+ V D M+RKG P+ +Y G L +A + E MV+
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 324 RG-FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P + + GLC+ + R++ R G VP
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 104/272 (38%), Gaps = 32/272 (11%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS R N VL VL +R+ + A VYE + N ++ + G+L K+
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ E + +E + T++ L++G + G +EEA + M + G FN LI
Sbjct: 261 WLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCK 320
Query: 273 XXXXXXXXXVLDMMVRKGFY-------------------------------PNVGSYQQV 301
V D M+ G Y P+V SY +
Sbjct: 321 QGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTL 380
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
++G + +F+EA + + + + PS V++ L+ GLC E +M Q
Sbjct: 381 MHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLI 440
Query: 362 VPRMGMWRHIVNCAVSKPRNYESTCVSLDEIL 393
P + + +V V K N DE+L
Sbjct: 441 FPDVITYTTLVKGFV-KNGNLSMATEVYDEML 471
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N+ I GLC+ G L A++ + + GL P+ T++T++ G E G + A
Sbjct: 514 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 573
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M + + P V+ + VLI M ++G PNV ++ +LYG+ A
Sbjct: 574 DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKA 633
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
EA + M G P+ S+ L+ C + EEV ++M+ + P
Sbjct: 634 GNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G C++GE+ A +F + G+EP++ +STL+ G + GM+ + + G
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V DVVVF+ I V M+ +G PNV +Y ++ GL R EA
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ ++ RG PS V++ L+ G C+ M++ G+ P + ++ +V+
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
F+ ++V V + A VY+ + + ILIKGLCQ G + A ++ +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
K G+EP++ T+S+L+ G C+ G + F E M K G PDVV++ VL+
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
M+ + NV + ++ G RF EAL+V M G P +F
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 1/255 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F TLI + +D+A + M P ++ +++ + + +++ A
Sbjct: 289 FCTLINGFCKRGE-MDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
V++D + I + G+L+ A V+ G+ PNV T++ L+ GLC+ G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EAF ++ K G+ P +V ++ LI + + M++ G+ P+V Y +
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ GL + A+ M+ + + V F L+ G CR R +E R M G
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGI 527
Query: 362 VPRMGMWRHIVNCAV 376
P + + ++ ++
Sbjct: 528 KPDVATFTTVMRVSI 542
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 13/221 (5%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAP--RLAVE----VDACCMNILIKGLCQQGELSAAVKV 212
FVL+ L GEV +A RL +E V N ++KGL ++ A ++
Sbjct: 221 GFVLDALFCK------GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRL 273
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
G PNV TF TL++G C++G ++ AF+ + ME+ G+ PD++ ++ LI
Sbjct: 274 LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFK 333
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ + KG +V + + + + A V + M+ +G P+ V+
Sbjct: 334 AGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ L+ GLC+ R E Q++++G P + + +++
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 99/235 (42%), Gaps = 6/235 (2%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLY------DVAGEVYEAAPRLAVEV 188
R D+A++ M + P TF V+ V + + + ++++ R +
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N++I L + + A K F+ + +EP++ T++T++ G C ++EA
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
E ++ P+ V +LI + +M KG PN +Y ++ +
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ ++ E M +G PS VS+ ++ GLC+ R +E Q + +P
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 83/205 (40%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
N V+++L + A + + +E D N +I G C L A ++F+
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
+ PN T + L+H LC+ ++ A M + G P+ V + L+
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
+ + M KG P++ SY ++ GL R EA + + +P V++ L+
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVP 363
G C+ R E M+R G P
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
RI+ A + ++ + + P T+N ++ + R D A ++E + +
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI LC+ ++ A+++F + G +PN T+ LM + +E +F+ E+M++
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ P +V ++++I + + P+V +Y ++ G R +EA
Sbjct: 707 GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Query: 315 LEVVEGMVSRGFVP 328
+ E M+ G P
Sbjct: 767 ALLYEHMLRNGVKP 780
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 4/163 (2%)
Query: 134 RRIDKA--VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDAC 191
RR+D+A + LL + F P+ T +++VL N D A ++ + +A
Sbjct: 621 RRLDEAERIFELLKVTPFG--PNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
L+ + ++ + K+F+E + G+ P++ ++S ++ GLC++G V+EA +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPN 294
+ PDVV + +LI + + M+R G P+
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ TF ++N D A ++++ + +E D + LI G + G L K+
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
F + G++ +V FS+ + + G + A ++M G+ P+VV + +LI
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ ++++G P++ +Y ++ G + E M+ G+ P V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463
Query: 333 FKQLVVGLCRH 343
+ LV GL +
Sbjct: 464 YGVLVDGLSKQ 474
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 9/250 (3%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
C PS+ T+ V+ V D A + + + ++ LI G C+ +L +A+
Sbjct: 300 CVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSAL 359
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
+FD+ K G PN TFS L+ + G +E+A E+ +KME G+ P V + +I
Sbjct: 360 VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGW 419
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+ D G NV +L L + EA E++ M SRG P+
Sbjct: 420 LKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNV 478
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLD 390
VS+ +++G CR + + ++ +G P + +++ RN++
Sbjct: 479 VSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCF---RNHDE-----Q 530
Query: 391 EILEGCNHLT 400
LE NH+T
Sbjct: 531 NALEVVNHMT 540
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 2/184 (1%)
Query: 192 CM--NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
CM N +I G ++GE+ +AV ++E +G+ PNV T+++LM+GLC+ +++A E +
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAK 309
+M+ GV D+ + LI + ++ +G P+ Y ++ G +
Sbjct: 644 EMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLG 703
Query: 310 RFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWR 369
+ AL++ + M+ G ++ L+ GL + +M G VP ++
Sbjct: 704 NMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYT 763
Query: 370 HIVN 373
IVN
Sbjct: 764 VIVN 767
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 6/247 (2%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+D AV M P+ T+ ++N L N D A E+ + V++D
Sbjct: 599 EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYG 658
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI G C++ + +A +F E + GL P+ +++L+ G G + A + +KM K
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ D+ + LI + M G P+ Y ++ GL +F++
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR---QMVRQGFVPRMGMWRHI 371
+++ E M P+ + + ++ G H R +D A R +M+ +G +P + +
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAG---HYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 372 VNCAVSK 378
V+ V
Sbjct: 836 VSGQVGN 842
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/354 (19%), Positives = 143/354 (40%), Gaps = 12/354 (3%)
Query: 27 WFCTQPNTDRDTAILARFQQKDWLTPKQAT------TLCNSLNHPSSAVTLLHLYTARKD 80
W C Q TD T +L++ + + + P + C N + + ++ K
Sbjct: 452 WLCKQGKTDEATELLSKMESR-GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL--EKG 508
Query: 81 FNPTEPFCTSLITK-LAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKA 139
P + LI + + + + + H T + + T+I V + KA
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQ-TSKA 567
Query: 140 VETLLSM-PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
E L +M + + S ++N +++ D A YE + + L+
Sbjct: 568 RELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
GLC+ + A+++ DE G++ ++ + L+ G C++ +E A ++ + G+ P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
++N LI + M++ G ++G+Y ++ GLL I A E+
Sbjct: 688 SQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELY 747
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
M + G VP + + +V GL + + +V +M + P + ++ ++
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 119/287 (41%), Gaps = 2/287 (0%)
Query: 88 CTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMP 147
TSLIT N L L + K + F+++ + ++KA+E M
Sbjct: 342 ATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
PS + ++ + + ++ A ++++ + + C N ++ LC+QG+
Sbjct: 402 VLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVC-NTILSWLCKQGKTD 460
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A ++ + G+ PNV +++ +M G C + ++ A + + G+ P+ +++LI
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILI 520
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMV-SRGF 326
V++ M N YQ ++ GL + +A E++ M+ +
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
S +S+ ++ G + + A +M G P + + ++N
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
Query: 110 QTLKRRSFSDD--FFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA 167
+ +K FS D + L+ +Y + R +A++ L M PS T+N +++
Sbjct: 303 EEMKAAGFSYDKVTYNALLDVYGK-SHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 168 NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
+ + D A E+ + D L+ G + G++ +A+ +F+E +G +PN+ T
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
F+ + +G E + +++ CG+ PD+V +N L+ V M
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
R GF P ++ ++ F +A+ V M+ G P ++ ++ L R E
Sbjct: 482 RAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE 541
Query: 348 EVDWALRQM 356
+ + L +M
Sbjct: 542 QSEKVLAEM 550
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 110/272 (40%), Gaps = 8/272 (2%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ ++ ++ + +K + M P T+N ++ L+ A +V+E
Sbjct: 246 YNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEM 305
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
D N L+ + A+KV +E +G P++ T+++L+ GM+
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+EA E +M + G PDV + L+ + + M G PN+ ++
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ + +F E +++ + + G P V++ L+ ++ EV ++M R GF
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 362 VPRMGMWRHIVNCAVSKPRNYESTCVSLDEIL 393
VP R N +S S C S ++ +
Sbjct: 486 VPE----RETFNTLISA----YSRCGSFEQAM 509
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 103/241 (42%), Gaps = 8/241 (3%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANR----LYDVAGEVYEAAPRLAVEVDACC 192
+++ + L M D +C P+ T+ +L+ + ++ +A EVY +E A
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV----IEPRAVL 596
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+ L+ + L A + F E + G P++ T ++++ + MV +A L+ M+
Sbjct: 597 LKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMK 656
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ G P + +N L+ +L ++ KG P++ SY V+Y R
Sbjct: 657 ERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+A + M + G VP +++ + EE +R M++ G P + IV
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 373 N 373
+
Sbjct: 777 D 777
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 116/293 (39%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAV 140
F+P+ SLI+ A +LD L +Q ++ + D F +T + A +++ A+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 141 ETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
M + C P+ TFN + + + ++++ + D N L+
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
Q G S VF E ++G P TF+TL+ G E+A +M GV PD+
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
+N ++ VL M PN +Y +L+ + K + E
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ S P V K LV+ + E + A ++ +GF P + +V+
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 14/257 (5%)
Query: 150 QCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV-----------DACCMNILIK 198
Q + + F + + N L DV G+ + P+ A++V N LI
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHR--PKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
+ G L A+++ ++ + G +P+V T++TL+ G G VE A E+M G P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
++ FN I + D + G P++ ++ +L E V
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
+ M GFVP +F L+ R E+ R+M+ G P + + ++ A+++
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL-AALAR 536
Query: 379 PRNYESTCVSLDEILEG 395
+E + L E+ +G
Sbjct: 537 GGMWEQSEKVLAEMEDG 553
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 113/285 (39%), Gaps = 18/285 (6%)
Query: 90 SLITKLAHANLLDPIHTLLHQTLKRR--SFSDDFFFTLIKLYAHVARRID---KAVETLL 144
SLI + LD + + L + K + S S + L L H ++ D +A + +
Sbjct: 105 SLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFH--KKFDLALRAFDWFM 162
Query: 145 SMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
D+Q ++++L A ++ +D LI G
Sbjct: 163 KQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSG 222
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV-EEAFEWLEKMEKCGVCPDVVVF 263
AV VF + + G +P + T++ +++ + G + +EKM+ G+ PD +
Sbjct: 223 RYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTY 282
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLY-GLLD----AKRFIEALEVV 318
N LI V + M GF SY +V Y LLD + R EA++V+
Sbjct: 283 NTLITCCKRGSLHQEAAQVFEEMKAAGF-----SYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
MV GF PS V++ L+ R +E QM +G P
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 70/161 (43%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D +N ++ ++ ++ A V D + G P++ T+++LM+ ++ E L
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEIL 687
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++ G+ PD++ +N +I + M G P+V +Y +
Sbjct: 688 REILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAAD 747
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
F EA+ VV M+ G P+ ++ +V G C+ R +E
Sbjct: 748 SMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/179 (18%), Positives = 73/179 (40%), Gaps = 6/179 (3%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P T N ++++ ++ A V + N L+ + + + ++
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
E G++P++ +++T+++ C + +A +M G+ PDV+ +N I
Sbjct: 687 LREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAA 746
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL------DAKRFIEALEVVEGMVSRG 325
V+ M++ G PN +Y ++ G +AK F+E L ++ +G
Sbjct: 747 DSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKG 805
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 35/257 (13%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P R TFN +L V L++ A +++ +E D N L+ +C+ G++ A ++
Sbjct: 337 PDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEI 396
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMV------------------------------- 241
+ P + PNV ++ST++ G + G
Sbjct: 397 LAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTK 456
Query: 242 ----EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
EEA + L +M G+ DVV +N L+ V M R+ PN+ +
Sbjct: 457 VGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLT 516
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
Y ++ G + EA+E+ S G V + L+ LC++ + +M
Sbjct: 517 YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Query: 358 RQGFVPRMGMWRHIVNC 374
++G P + + I++
Sbjct: 577 KEGISPNVVTYNSIIDA 593
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ T+I +A A R D+A+ M R ++N +L++ + A ++
Sbjct: 412 YSTVIDGFAK-AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ ++ D N L+ G +QG+ KVF E + + PN+ T+STL+ G + G+
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+EA E + + G+ DVV+++ LI ++D M ++G PNV +Y +
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 302 L 302
+
Sbjct: 591 I 591
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 1/204 (0%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG-ELSAAVKVFDEF 216
F+ +++ + L++ A V+ + + + N +I + G E K FDE
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEM 330
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
++G++P+ TF++L+ G+ E A ++M + DV +N L+
Sbjct: 331 QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM 390
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
+L M K PNV SY V+ G A RF EAL + M G VS+ L
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 337 VVGLCRHRRTEEVDWALRQMVRQG 360
+ + R+EE LR+M G
Sbjct: 451 LSIYTKVGRSEEALDILREMASVG 474
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 91/199 (45%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A +V++ + ++ + ++ C++G++ A ++ E +SG+ P TF+ L+
Sbjct: 323 ARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIG 382
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
G G E+ E+ E M G+ P FN ++ +L + KGF P
Sbjct: 383 GFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVP 442
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
+ +Y ++ G ++ +AL++ M R P F F+ L+VGLC + E + L
Sbjct: 443 DEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYL 502
Query: 354 RQMVRQGFVPRMGMWRHIV 372
+ M ++ P ++ ++
Sbjct: 503 KIMKKRLIEPNADIYDALI 521
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 155/377 (41%), Gaps = 50/377 (13%)
Query: 39 AILARFQQKDWLTPKQATTLCNSLNH--------PSSAVTLLHLYTARKDFNPTEPFCTS 90
IL RF+ + T KQA + + +H S A+T+ L AR + +S
Sbjct: 82 TILLRFKNPE--TAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESS 139
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQ 150
L+ ++L+D L T + S + F L++ YA + R ++ + + D
Sbjct: 140 LLNSPPDSDLVDS----LLDTYEISSSTPLVFDLLVQCYAKI-RYLELGFDVFKRLCDCG 194
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
S T N +++ +++ D+ +YE A + + + I+I+ LC++G L V
Sbjct: 195 FTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVV 254
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
+ D P+V ++L+ + E+ +EE+ L+++ + D + +++++
Sbjct: 255 DLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAK 314
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPN-------------------------------VGSYQ 299
V D M+++GF N V Y
Sbjct: 315 AKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 300 QVLYGLLDA-KRF---IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
+ L+ RF + LE E MV+RG +PS +F ++V + + + L +
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTK 434
Query: 356 MVRQGFVPRMGMWRHIV 372
+ +GFVP + H++
Sbjct: 435 SIDKGFVPDEHTYSHLI 451
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 10/277 (3%)
Query: 98 ANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRT 157
A LLD I L L R+++ T++ Y+ + +KA++ M + P+ T
Sbjct: 195 AKLLDKI-PLQEYLLDVRAYT-----TILHAYSRTGK-YEKAIDLFERMKEMGPSPTLVT 247
Query: 158 FNFVLNVL--VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE 215
+N +L+V + + G + E + ++ D + ++ ++G L A + F E
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSK-GLKFDEFTCSTVLSACAREGLLREAKEFFAE 306
Query: 216 FPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
G EP T++ L+ + G+ EA L++ME+ D V +N L+
Sbjct: 307 LKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGF 366
Query: 276 XXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQ 335
V++MM +KG PN +Y V+ A + EAL++ M G VP+ ++
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 336 LVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
++ L + R+ E+ L M G P W ++
Sbjct: 427 VLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML 463
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 86/178 (48%), Gaps = 2/178 (1%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P FN +L++ N +YD A + E+ + D N L+ ++GE A ++
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
KS L+P++ +++T++ G C +G+++EA L +M + G+ P + +N +
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTA 748
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
V++ M + PN +++ V+ G A ++ EA++ V + + F P F
Sbjct: 749 MGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI--KTFDPCF 804
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 1/243 (0%)
Query: 156 RTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG-ELSAAVKVFD 214
R + +L+ Y+ A +++E + N+++ + G + V D
Sbjct: 211 RAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 215 EFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
E GL+ + T ST++ +G++ EA E+ +++ CG P V +N L+
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
VL M + +Y +++ + A EA V+E M +G +P+ +++
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 335 QLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
++ + + +E M G VP + +++ K R+ E + D
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 395 GCN 397
GC+
Sbjct: 451 GCS 453
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 70/161 (43%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N ++ + A + + + GL P++ T+++LM +G +A E L
Sbjct: 630 DMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEIL 689
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+ +EK + PD+V +N +I +L M +G P + +Y + G
Sbjct: 690 KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAM 749
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
F E +V+E M P+ ++FK +V G CR + E
Sbjct: 750 GMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 90/225 (40%), Gaps = 36/225 (16%)
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
A+++D + I ++ L ++ + S A K+ D+ P +VR ++T++H G E+A
Sbjct: 170 ALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKA 229
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX-XXXXXVLDMMVRK-------------- 289
+ E+M++ G P +V +NV++ VLD M K
Sbjct: 230 IDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLS 289
Query: 290 ---------------------GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
G+ P +Y +L A + EAL V++ M
Sbjct: 290 ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPA 349
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V++ +LV R ++E + M ++G +P + +++
Sbjct: 350 DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVID 394
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 85/216 (39%), Gaps = 36/216 (16%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ T+I Y + D+A++ SM + C P+ T+N VL++L G+ +
Sbjct: 389 YTTVIDAYGKAGKE-DEALKLFYSMKEAGCVPNTCTYNAVLSLL---------GKKSRS- 437
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
N +IK LC + +G PN T++T++ KGM
Sbjct: 438 ------------NEMIKMLC-------------DMKSNGCSPNRATWNTMLALCGNKGMD 472
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ +M+ CG PD FN LI + M R GF V +Y +
Sbjct: 473 KFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNAL 532
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
L L + V+ M S+GF P+ S+ ++
Sbjct: 533 LNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 72/168 (42%)
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
L+ + + F F K G +P++ F++++ M ++A LE + + G+ PD+V +N
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNS 671
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
L+ +L + + P++ SY V+ G EA+ ++ M RG
Sbjct: 672 LMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERG 731
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
P ++ V G E++ + M + P ++ +V+
Sbjct: 732 IRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 94/245 (38%), Gaps = 1/245 (0%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A+ L M + C T+N ++ V A V E + V +A +I
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
+ G+ A+K+F ++G PN T++ ++ L +K E + L M+ G
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCS 453
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P+ +N ++ V M GF P+ ++ ++ ++A ++
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVS 377
M GF ++ L+ L R + + M +GF P + ++ C +
Sbjct: 514 YGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQC-YA 572
Query: 378 KPRNY 382
K NY
Sbjct: 573 KGGNY 577
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D+A L S+ + P T+N ++++ V A E+ + + ++ D N +
Sbjct: 648 DQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
IKG C++G + AV++ E + G+ P + T++T + G GM E + +E M K
Sbjct: 708 IKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC 767
Query: 257 CPDVVVFNVLI 267
P+ + F +++
Sbjct: 768 RPNELTFKMVV 778
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 7/261 (2%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD-VAGEVYEAAPRLAVEVDACCM 193
R ++ ++ L M C P+R T+N +L L N+ D V+ E D
Sbjct: 436 RSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTF 494
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N LI + G A K++ E ++G V T++ L++ L KG + M+
Sbjct: 495 NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKS 554
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G P +++++ + + + +P+ + +L +
Sbjct: 555 KGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAG 614
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ G+ P V F ++ R+ ++ + L + G P + + +++
Sbjct: 615 SERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 374 CAVSKPRNYESTCVSLDEILE 394
V + C +EIL+
Sbjct: 675 MYVRR-----GECWKAEEILK 690
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 7/252 (2%)
Query: 92 ITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQC 151
++KL HA + LL K + +D F LI+ Y A + ++V+ M D
Sbjct: 163 VSKLNHARCI-----LLDMPEKGVPWDEDMFVVLIESYGK-AGIVQESVKIFQKMKDLGV 216
Query: 152 WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
+ +++N + V++ Y +A + VE N+++ G L A++
Sbjct: 217 ERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALR 276
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
F++ G+ P+ TF+T+++G C ++EA + +M+ + P VV + +I
Sbjct: 277 FFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYL 336
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+ + M G PN +Y +L GL DA + +EA +++ M+++ P
Sbjct: 337 AVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDN 396
Query: 332 S-FKQLVVGLCR 342
S F +L+V +
Sbjct: 397 SIFLKLLVSQSK 408
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 13/237 (5%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R++ A+ M P TFN ++N + D A +++ +
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYT 329
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+IKG + +++F+E SG+EPN T+STL+ GLC+ G + EA L+ M
Sbjct: 330 TMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
Query: 255 GVCP-DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ P D +F L+ VL M G Y ++ A +
Sbjct: 390 HIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNR 449
Query: 314 ALEVVEGMVSRGFV----------PSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
A+++++ ++ + + PS ++ ++ LC + +T + + RQ++++G
Sbjct: 450 AIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 98/239 (41%), Gaps = 12/239 (5%)
Query: 137 DKAVETLLSMPDFQCWPSRRT-----------FNFVLNVLVANRLYDVAGEVYEAAPRLA 185
+K +T+ M D + W +R + V NVL + + A + + R
Sbjct: 85 EKLEDTICRMMDNRAWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSG 144
Query: 186 -VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
+ D +IK L + +L+ A + + P+ G+ + F L+ + G+V+E+
Sbjct: 145 LIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQES 204
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
+ +KM+ GV + +N L + MV +G P +Y +L+G
Sbjct: 205 VKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ R AL E M +RG P +F ++ G CR ++ +E + +M P
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP 323
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
+I + H R D A + L M + Q P TF+ ++N V R A E+Y+ R
Sbjct: 51 MIDSFCHSGRWSD-ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRW 109
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++ N +I G C+Q + A ++ D G P+V TFSTL++G C+ V+
Sbjct: 110 SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNG 169
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
E +M + G+ + V + LI +L+ M+ G P+ ++ +L G
Sbjct: 170 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 229
Query: 305 LLDAKRFIEALEVVEGM 321
L K +A ++E +
Sbjct: 230 LCSKKELRKAFAILEDL 246
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%)
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAF 245
++ D ++ LC+ G A +F E + G+ PNV T++ ++ C G +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 246 EWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL 305
+ L M + + PD+V F+ LI + M+R +P +Y ++ G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGF 125
Query: 306 LDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
R +A +++ M S+G P V+F L+ G C+ +R + +M R+G V
Sbjct: 126 CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 89/194 (45%)
Query: 152 WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
+P+ T+N +++ + + A ++ + D + LI ++ ++S A +
Sbjct: 42 FPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEE 101
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
++ E + + P T+++++ G C++ V++A L+ M G PDVV F+ LI
Sbjct: 102 IYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC 161
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+ M R+G N +Y +++G A +++ M+S G P ++
Sbjct: 162 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 221
Query: 332 SFKQLVVGLCRHRR 345
+F ++ GLC +
Sbjct: 222 TFHCMLAGLCSKKE 235
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +I C G S A ++ + + P++ TFS L++ ++ V EA E ++M +
Sbjct: 49 NCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR 108
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ P + +N +I +LD M KG P+V ++ ++ G AKR
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+E+ M RG V + V++ L+ G C+ + L +M+ G P
Sbjct: 169 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAP 218
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D A L SM C P TF+ ++N + D E++ R + +
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
LI G CQ G+L AA + +E G+ P+ TF ++ GLC K + +AF LE ++K
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/156 (18%), Positives = 72/156 (46%)
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
+S ++ +V + ++ LC+ G A +M + G+ P+V+ +N +I
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
+L M+ K P++ ++ ++ + ++ EA E+ + M+ P+ +++ ++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
G C+ R ++ L M +G P + + ++N
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLIN 158
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 142/362 (39%), Gaps = 43/362 (11%)
Query: 39 AILARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARK----DFNPTEPFCTSLITK 94
++++ + +TP + N + A H +K DF F L +
Sbjct: 112 SVVSELNKLRRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCL-NR 170
Query: 95 LAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPS 154
H D + L+ + R S+ F LI+++A RR + M F P
Sbjct: 171 NGHFRAADQLPELMDS--QGRPPSEKQFEILIRMHAD-NRRGLRVYYVYEKMKKFGFKPR 227
Query: 155 RRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ------------ 202
+N +++ LV N +D+A VYE + ++ IL+KGLC+
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 203 -----------------------QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
+G L A+++V+DE + ++P+V + TL+ GLC+ G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
VE +E +M+ + D ++ VLI + + +V G+ ++G Y
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
V+ GL + +A ++ + + P F + ++V R + L ++
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Query: 360 GF 361
G+
Sbjct: 468 GY 469
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 8/294 (2%)
Query: 107 LLHQTLKRRSFSDDFFFTLIKLYAHVARRID--KAVETLLSMPDFQCWP-SRRTFNFVLN 163
H K++ + DF +A+ R +A + L + D Q P S + F ++
Sbjct: 144 FFHWAGKQKGYKHDF--AAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIR 201
Query: 164 VLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEP 223
+ NR VYE + + N ++ L + G A+ V+++F + GL
Sbjct: 202 MHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVE 261
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL 283
TF L+ GLC+ G +EE E L++M + PDV + +I V
Sbjct: 262 ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVW 321
Query: 284 DMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
D M R P+V +Y ++ GL R E+ M + + ++ L+ G
Sbjct: 322 DEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVAD 381
Query: 344 RRTEEVDWALRQMVRQGFVPRMGMWRHIVN--CAVSK-PRNYESTCVSLDEILE 394
+ +V G++ +G++ ++ C+V++ + Y+ V+++E LE
Sbjct: 382 GKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELE 435
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P FN +L+ L L GE R V+ DA N+L G C+ + A+K+
Sbjct: 232 PEINAFNMLLDALCKCGLVK-EGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC---PDVVVFNVLIXX 269
+E ++G +P T+ + C+ GMV+EA + + M G P F ++I
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
++ M+ G P+V +Y+ V+ G+ A++ EA + ++ M ++G+ P
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPD 410
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V++ + LC +R+T+E +MV P + + +++
Sbjct: 411 IVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLIS 454
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
+P + F+ L+ LC+ G+V+E L +M + V PD FNVL
Sbjct: 231 QPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG---FVPSFVSFKQLVV 338
+L+ M+ G P +Y + A EA ++ + M+++G P+ +F ++V
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
L ++ + EE + +M+ G +P + ++ ++
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVI 383
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 11/252 (4%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R +E+L + F C P +FN + N ++ D E + V + C
Sbjct: 108 RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD------EVFVYMGVMLKCCSP 161
Query: 194 NIL-----IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
N++ I C+ GEL A+K F + L PNV TF+ L+ G C+ G +E A
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M + + +VV + LI + MV PN Y ++ G
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
A++ + M+++G ++ ++ GLC + + +E + M + VP M ++
Sbjct: 282 GDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIF 341
Query: 369 RHIVNCAVSKPR 380
++N R
Sbjct: 342 TTMMNAYFKSGR 353
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
C P+ T++ ++ + +A + + + R A+ + LI G C+ G+L AV
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
++ E + + NV T++ L+ G C+KG ++ A E +M + V P+ +V+ +I
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
L M+ +G ++ +Y ++ GL + EA E+VE M VP
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
V F ++ + R + +++ +GF P
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 116/260 (44%), Gaps = 1/260 (0%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
SL + +LD + + LK S + + T I + + + A+++ SM
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCK-SGELQLALKSFHSMKR 191
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P+ TF +++ +VA +Y+ R+ + ++ LI G C++GE+
Sbjct: 192 DALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQR 251
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A +++ + +EPN ++T++ G ++G + A ++L KM G+ D+ + V+I
Sbjct: 252 AEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIIS 311
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+++ M + P++ + ++ + R A+ + ++ RGF P
Sbjct: 312 GLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEP 371
Query: 329 SFVSFKQLVVGLCRHRRTEE 348
V+ ++ G+ ++ + E
Sbjct: 372 DVVALSTMIDGIAKNGQLHE 391
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 4/224 (1%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P R +FN V++ + A ++ + PR E D N LI G C+ G++ +A V
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 213 FDEFPKS-GL--EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXX 269
+ S G +P++ +F++L +G + M++E F ++ M KC P+VV ++ I
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDT 172
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
M R PNV ++ ++ G A A+ + + M +
Sbjct: 173 FCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLN 232
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
V++ L+ G C+ + + +MV P ++ I++
Sbjct: 233 VVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/236 (19%), Positives = 92/236 (38%), Gaps = 5/236 (2%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A++ L M + + +++ L N A E+ E + + D +
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTM 344
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ + G + AAV ++ + + G EP+V ST++ G+ + G + EA + C
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----CIE 399
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
+ V++ VLI + + G P+ Y + GL ++A +
Sbjct: 400 KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ MV G + +++ L+ GL E +M+ G P ++ ++
Sbjct: 460 LKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLI 515
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 89/228 (39%), Gaps = 5/228 (2%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++ +A E + M P F ++N + A +Y E D ++
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+I G+ + G+L A+ F + N ++ L+ LC++G E K+ +
Sbjct: 378 TMIDGIAKNGQLHEAIVYF-----CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEA 432
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PD ++ I + MV++G ++ +Y ++YGL +EA
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+V + M++ G P F L+ + L M R+G V
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI + G +S A VF GL+ +V T++ LMHG + + + FE +++M
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PDV +N+LI ++ ++R+GF P+ ++ V+ G F EA
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN- 373
+ M P V+ L+ G C+ +R E+ +++ G P + ++ +++
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 374 -CAVS 377
C+V
Sbjct: 628 YCSVG 632
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 5/261 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
T I KL A L ++L + LK S D + ++ K E + +
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGFC--KVGKPEEAIKLIHS 366
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
F+ P+ ++ L+ + + A +++ L + D C +I G C G
Sbjct: 367 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEK-GMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A + F KSG P++ T ST++ G C + G + +A M+ G+ DVV +N L+
Sbjct: 427 AFQYFGALLKSGNPPSLTT-STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
++D M G P+V +Y +++ ++ EA E++ ++ RGFV
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 328 PSFVSFKQLVVGLCRHRRTEE 348
PS ++F ++ G + +E
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQE 566
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 118/314 (37%), Gaps = 34/314 (10%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKR-RSFSDDFFFTLIKLYAHVARRIDKAVE 141
P+ C SL+ ++ + L+ + L R R + I+ Y DK E
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGY-FDKGWE 292
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
L+ M + P F ++ L A V + D+ ++ +I G C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 202 QQGELSAAVK--------------------------------VFDEFPKSGLEPNVRTFS 229
+ G+ A+K +F E + GL P+ ++
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 230 TLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK 289
T++ G C G ++AF++ + K G P + +LI V M +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 290 GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
G +V +Y +++G + + E+++ M S G P ++ L+ + +E
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 350 DWALRQMVRQGFVP 363
+ + +++R+GFVP
Sbjct: 533 NEIISELIRRGFVP 546
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+++K E + M P T+N +++ +V D A E+ R
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+I G ++G+ A ++ ++P+V T S L+HG C+ +E+A K+
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PDVV++N LI ++ +MV++G PN ++ ++ G L+ KRF+ +
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG-LEGKRFVNS 671
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 168 NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
N+++++ E+ A + D NILI + +G + A ++ E + G P+
Sbjct: 495 NKVFELIDEMRSAG----ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
F+ ++ G ++G +EAF M + PDVV + L+ + + ++
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
G P+V Y +++G +A E++ MV RG +P+ + LV+GL
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 94/232 (40%), Gaps = 3/232 (1%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R+++ A++ + F +PSR +L ++ ++A E E ++A +
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVL 274
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
++ I+ C G ++ G+ P++ F+ + LC+ G ++EA L K++
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ D V + +I ++ + PN+ Y L + +
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLR 391
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
A + + + G +P V + ++ G C RT++ +++ G P +
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSL 443
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 2/185 (1%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI + G +S A VF GL+ +V T++ LMHG + + + FE +++M
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PDV +N+LI ++ ++R+GF P+ ++ V+ G F EA
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN- 373
+ M P V+ L+ G C+ +R E+ +++ G P + ++ +++
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 374 -CAVS 377
C+V
Sbjct: 628 YCSVG 632
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 5/261 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
T I KL A L ++L + LK S D + ++ K E + +
Sbjct: 310 TVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGFC--KVGKPEEAIKLIHS 366
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
F+ P+ ++ L+ + + A +++ L + D C +I G C G
Sbjct: 367 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEK-GMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A + F KSG P++ T ST++ G C + G + +A M+ G+ DVV +N L+
Sbjct: 427 AFQYFGALLKSGNPPSLTT-STILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
++D M G P+V +Y +++ ++ EA E++ ++ RGFV
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 328 PSFVSFKQLVVGLCRHRRTEE 348
PS ++F ++ G + +E
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQE 566
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 118/314 (37%), Gaps = 34/314 (10%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKR-RSFSDDFFFTLIKLYAHVARRIDKAVE 141
P+ C SL+ ++ + L+ + L R R + I+ Y DK E
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGY-FDKGWE 292
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
L+ M + P F ++ L A V + D+ ++ +I G C
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 202 QQGELSAAVK--------------------------------VFDEFPKSGLEPNVRTFS 229
+ G+ A+K +F E + GL P+ ++
Sbjct: 353 KVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYT 412
Query: 230 TLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK 289
T++ G C G ++AF++ + K G P + +LI V M +
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 290 GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEV 349
G +V +Y +++G + + E+++ M S G P ++ L+ + +E
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEA 532
Query: 350 DWALRQMVRQGFVP 363
+ + +++R+GFVP
Sbjct: 533 NEIISELIRRGFVP 546
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+++K E + M P T+N +++ +V D A E+ R
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+I G ++G+ A ++ ++P+V T S L+HG C+ +E+A K+
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PDVV++N LI ++ +MV++G PN ++ ++ G L+ KRF+ +
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG-LEGKRFVNS 671
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 4/173 (2%)
Query: 168 NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
N+++++ E+ A + D NILI + +G + A ++ E + G P+
Sbjct: 495 NKVFELIDEMRSAG----ISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLA 550
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
F+ ++ G ++G +EAF M + PDVV + L+ + + ++
Sbjct: 551 FTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLL 610
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
G P+V Y +++G +A E++ MV RG +P+ + LV+GL
Sbjct: 611 DAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/232 (18%), Positives = 94/232 (40%), Gaps = 3/232 (1%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R+++ A++ + F +PSR +L ++ ++A E E ++A +
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVL 274
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
++ I+ C G ++ G+ P++ F+ + LC+ G ++EA L K++
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ D V + +I ++ + PN+ Y L + +
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLR 391
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
A + + + G +P V + ++ G C RT++ +++ G P +
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSL 443
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 12/256 (4%)
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHVARRID------KAVETLLSMPDFQCWPSRRTFNFV 161
++ ++R+ + F T++K R +D A ET LS D + +
Sbjct: 608 VYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVI------DYTII 661
Query: 162 LNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
+N L A + A V ++ N LI GLCQQG L A+++FD GL
Sbjct: 662 INGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGL 721
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
P+ T+ L+ LC++G+ +A + L+ M G+ P+++++N ++
Sbjct: 722 VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMR 781
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
V+ + P+ + ++ G EAL V + F F L+ G C
Sbjct: 782 VVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFC 841
Query: 342 RHRRTEEVDWALRQMV 357
R EE LR+M+
Sbjct: 842 TKGRMEEARGLLREML 857
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 10/174 (5%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D +ILI GL ++G + A+ + + K G+EPN+ T++ ++ GLC+ G +EEAF
Sbjct: 276 DVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLF 335
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++ G+ D ++ LI +L M ++G P++ +Y V+ GL A
Sbjct: 336 NRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMA 395
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
R EA E VS+G V +++ L L + + + +D L +R+ F+
Sbjct: 396 GRVSEADE-----VSKGVVGDVITYSTL---LDSYIKVQNIDAVLE--IRRRFL 439
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 3/200 (1%)
Query: 152 WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVE--VDACCMNILIKGLCQQGELSAA 209
+PS TF ++ V D A EV E V D + +I G C+ G+ A
Sbjct: 131 FPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELA 190
Query: 210 VKVFDEFPKSG-LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
+ F+ SG L PN+ T++TL+ LC+ G V+E + + ++E G D V ++ I
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
MV KG +V SY ++ GL EAL ++ M+ G P
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 329 SFVSFKQLVVGLCRHRRTEE 348
+ +++ ++ GLC+ + EE
Sbjct: 311 NLITYTAIIRGLCKMGKLEE 330
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ LCQ G++ + G E + +S +HG + G + +A +M + G
Sbjct: 213 LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKG 272
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ DVV +++LI +L M+++G PN+ +Y ++ GL + EA
Sbjct: 273 MNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAF 332
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
+ ++S G + L+ G+CR L M ++G P + + ++N
Sbjct: 333 VLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Query: 376 VSKPRNYESTCVS 388
R E+ VS
Sbjct: 393 CMAGRVSEADEVS 405
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 175 GEVYEAAPRLA------VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
G V EA L VE + +I+GLC+ G+L A +F+ G+E + +
Sbjct: 291 GNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY 350
Query: 229 STLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
TL+ G+C KG + AF L ME+ G+ P ++ +N +I
Sbjct: 351 VTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/298 (19%), Positives = 106/298 (35%), Gaps = 70/298 (23%)
Query: 145 SMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
+MP+ P T+ ++ + A E++ + +V A C N +I LC++G
Sbjct: 472 AMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKG 530
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHG------------------------------ 234
L A +V E + GL ++ T TL+H
Sbjct: 531 MLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLN 590
Query: 235 -----LCEKGMVEEAFEWLEKMEKCGVCP------------------------------- 258
LC++G E A E M + G+
Sbjct: 591 DAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTL 650
Query: 259 ---DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
DV+ + ++I + +G N +Y ++ GL +EAL
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ + + + G VPS V++ L+ LC+ + + L MV +G VP + ++ IV+
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 5/213 (2%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+++A+ L M P+ T+ ++ L + A ++ + +EVD
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G+C++G L+ A + + + G++P++ T++T+++GLC G V EA E + G
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-----G 407
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V DV+ ++ L+ + + ++ +L L + EA
Sbjct: 408 VVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEAD 467
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
+ M P ++ ++ G C+ + EE
Sbjct: 468 ALYRAMPEMDLTPDTATYATMIKGYCKTGQIEE 500
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARR--IDKAVETLLSM 146
T++I L L+ L ++ L D+F + + L + R+ +++A L M
Sbjct: 316 TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLY--VTLIDGICRKGNLNRAFSMLGDM 373
Query: 147 PDFQCWPSRRTFNFVLNVL-VANRLYD-------VAGEVYEAAPRL-------------- 184
PS T+N V+N L +A R+ + V G+V + L
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLE 433
Query: 185 --------AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC 236
+ +D NIL+K G A ++ P+ L P+ T++T++ G C
Sbjct: 434 IRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYC 493
Query: 237 EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVG 296
+ G +EEA E ++ K V V +N +I VL + KG Y ++
Sbjct: 494 KTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIH 552
Query: 297 SYQQVLYGL 305
+ + +L+ +
Sbjct: 553 TSRTLLHSI 561
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 4/210 (1%)
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
DF P +F +++ + ++ A + + D N ++KG C + S
Sbjct: 223 DFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGS 282
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
AV V+ + + G+EP+ T++TL+ GL + G VEEA +L+ M G PD + L+
Sbjct: 283 EAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLM 342
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+L+ M +G PN +Y +L+GL A+ + +E+ E M S G
Sbjct: 343 NGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVK 402
Query: 328 PSFVSFKQLVVGLCRHRRTEEV----DWAL 353
+ LV L + + E D+A+
Sbjct: 403 LESNGYATLVRSLVKSGKVAEAYEVFDYAV 432
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 76/187 (40%), Gaps = 10/187 (5%)
Query: 177 VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC 236
VY+ VE D N LI GL + G + A +G EP+ T+++LM+G+C
Sbjct: 287 VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Query: 237 EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVG 296
KG A LE+ME G P+ +N L+ + +MM G
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN 406
Query: 297 SYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
Y ++ L+ + + EA EV + V + ++ L L W L++
Sbjct: 407 GYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTL---------KW-LKKA 456
Query: 357 VRQGFVP 363
QG VP
Sbjct: 457 KEQGLVP 463
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 195 ILIKGLCQ--QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
IL+ C+ +S +V + +GLEP+ T + LCE G V+EA + ++++
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF--YPNVGSYQQVLYGLLDAKR 310
+ PD +N L+ +D M R F P++ S+ ++ + ++K
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
EA+ +V + + GF P + ++ G C + E ++M +G P +
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 371 IV 372
++
Sbjct: 306 LI 307
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 152/350 (43%), Gaps = 8/350 (2%)
Query: 32 PNTDRDTAILARFQQKDWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSL 91
P++ T +QK + ++ L +S N S TLL + + PT +
Sbjct: 21 PHSSFKTKWNENLKQKYAMEELRSNLLTDSEN-ASVMRTLLSSFQLH-NCEPTPQAYRFV 78
Query: 92 ITKLAHANLLDPIHTLLHQTLKRRSFS--DDFFFTLIKLYAHVARRIDKAVETLLSMPDF 149
I LA ++ L+ I ++L+ F + F +I Y + RI++A+E +P+F
Sbjct: 79 IKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGF-SGRIEEAIEVFFKIPNF 137
Query: 150 QCWPSRRTFNFVLNVLVANRL-YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
+C PS T N +L VLV R ++ E+ A R+ V ++ ILI LC+ GE+
Sbjct: 138 RCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDC 197
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE--EAFEWLEKMEKCGVCPDVVVFNVL 266
A ++ + + + R +S L+ +C+ + +LE + K P + + V+
Sbjct: 198 ATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVV 257
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ VL+ M P++ Y VL G++ + + +A ++ + ++ G
Sbjct: 258 MRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGL 317
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
P ++ + GLC+ E + M + G P + + ++ V
Sbjct: 318 APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALV 367
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
PD C+ VL ++A+ Y A ++++ L + D N+ I GLC+Q ++
Sbjct: 284 PDLVCY------TIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDI 337
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
A+K+ K G EPNV T++ L+ L + G + A ++ME GV + F+++
Sbjct: 338 EGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIM 397
Query: 267 I 267
I
Sbjct: 398 I 398
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P T V+ VL A EV E +VD N L+KG C G++ A +
Sbjct: 281 PDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF 340
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
F E + G PNV T++ L+ G C+ GM++ A + M+ + + FN LI
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 273 XXXXXXXXXVLDMMVRKGFY--PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+L+MM + Y V+YG R+ +ALE + M P
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM--EKLFPRA 458
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
V ++ LC +++ A QM+ +G VP +
Sbjct: 459 VDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSI 493
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 100/233 (42%), Gaps = 8/233 (3%)
Query: 118 SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEV 177
D + + ++ + RI + L M P+ +N +L+ L N G+V
Sbjct: 180 GDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN------GKV 233
Query: 178 YEAAPRLA--VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
A ++ E + NILI C + +L ++ + ++ G P+V T + +M L
Sbjct: 234 GRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVL 293
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
C +G V EA E LE++E G DVV N L+ M RKG+ PNV
Sbjct: 294 CNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNV 353
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
+Y ++ G D AL+ M + +F +F L+ GL RT++
Sbjct: 354 ETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDD 406
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/306 (20%), Positives = 119/306 (38%), Gaps = 38/306 (12%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
TL+K Y + + + A + M P+ T+N ++ + D A + +
Sbjct: 323 TLVKGYCALGK-MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT 381
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT--FSTLMHGLCEKGMV 241
A+ + N LI+GL G +K+ + S R ++ +++G ++
Sbjct: 382 DAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRW 441
Query: 242 EEAFEWLEKMEKC---------------------------------GVCPDVVVFNVLIX 268
E+A E+L KMEK G P ++V + LI
Sbjct: 442 EDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIH 501
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+++ MV +G+ P ++ V+ G + + ++ VE M RG VP
Sbjct: 502 RYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVP 561
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
S+ L+ LC ++ +MV + VP MW ++ C K + ++ S
Sbjct: 562 DTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQKTAIHVNS--S 619
Query: 389 LDEILE 394
L +I++
Sbjct: 620 LQDIIQ 625
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 118/316 (37%), Gaps = 69/316 (21%)
Query: 90 SLITKLAHANLLDPIHTLLHQTLKRRSF--SDDFFFTLIKLYAHVARRIDKAVETLLSMP 147
+L KL D ++ LL + D F T+I+ + AR I + + + +
Sbjct: 81 ALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGR-ARLIKRVISVVDLVS 139
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
F PS + FN +L+VLV + D+A E +
Sbjct: 140 KFGIKPSLKVFNSILDVLVKEDI-DIAREFFTR--------------------------- 171
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV----- 262
+ SG+ +V T+ LM GL + + F+ L+ M+ GV P+ VV
Sbjct: 172 -------KMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLL 224
Query: 263 --------------------------FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVG 296
FN+LI +L+ GF P+V
Sbjct: 225 HALCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVV 284
Query: 297 SYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+ +V+ L + R EALEV+E + S+G V+ LV G C + +M
Sbjct: 285 TVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEM 344
Query: 357 VRQGFVPRMGMWRHIV 372
R+G++P + + ++
Sbjct: 345 ERKGYLPNVETYNLLI 360
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 7/212 (3%)
Query: 154 SRRTFNFVLNVLVANRLYDVAGEVYEAAP-RLAVEVDACCMNILIKGLCQQGELSAAVKV 212
SR T+ + + L R +D ++ + P + + D +I+G + + + V
Sbjct: 75 SRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISV 134
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL-EKMEKCGVCPDVVVFNVLIXXXX 271
D K G++P+++ F++++ L ++ ++ A E+ KM G+ DV + +L+
Sbjct: 135 VDLVSKFGIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILMKGLS 193
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
+L +M G PN Y +L+ L + A ++ M P+ V
Sbjct: 194 LTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDV 249
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+F L+ C ++ + L + GFVP
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVP 281
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 147/365 (40%), Gaps = 46/365 (12%)
Query: 68 AVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIK 127
A+++ +K F T +LI L I +L+ ++ S + F + +
Sbjct: 111 ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISR 170
Query: 128 LYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVE 187
YA AR++ +A+ M +F FN +L+ L +R A +V++ + E
Sbjct: 171 RYAR-ARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 188 VDACCMNILIKGL-----------------------------------CQQGELSAAVKV 212
D IL++G C+ + A++
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
F+E + +P+ F +L++GL + + +A E+ E+ + G + +N L+
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCW 349
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+D M KG PN +Y +L+ L+ +R EA EV + M P+ +
Sbjct: 350 SQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCE---PTVST 406
Query: 333 FKQLVVGLCRHRRTEEVDWALR---QMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSL 389
++ +V C R +D A++ +M +G +P M M+ ++ A+ + C
Sbjct: 407 YEIMVRMFCNKER---LDMAIKIWDEMKGKGVLPGMHMFSSLI-TALCHENKLDEACEYF 462
Query: 390 DEILE 394
+E+L+
Sbjct: 463 NEMLD 467
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 102/252 (40%), Gaps = 4/252 (1%)
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHV-ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
+++ +K F D I + AH A++ ++A+ M C PS F ++N L
Sbjct: 254 VNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLG 313
Query: 167 ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR 226
+ + + A E +E + ++A N L+ C + A K DE G+ PN R
Sbjct: 314 SEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNAR 373
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
T+ ++H L +EA+E + M P V + +++ + D M
Sbjct: 374 TYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEM 430
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
KG P + + ++ L + EA E M+ G P F +L L R
Sbjct: 431 KGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRK 490
Query: 347 EEVDWALRQMVR 358
++V + +M R
Sbjct: 491 DKVTDLVVKMDR 502
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +I + R D A + L M + Q P TF+ ++N LV A E+Y
Sbjct: 114 YSGMIDSFCRSGRWTD-AEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM 172
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
R + N +I G C+Q L+ A ++ D P+V TFSTL++G C+ V
Sbjct: 173 LRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRV 232
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
+ E +M + G+ + V + LI +L++M+ G PN ++Q +
Sbjct: 233 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSM 292
Query: 302 LYGLLDAKRFIEALEVVEGM 321
L L K +A ++E +
Sbjct: 293 LASLCSKKELRKAFAILEDL 312
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I C+ G + A ++ + + + P+V TFS L++ L ++G V EA E M + G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P + +N +I +LD M K P+V ++ ++ G AKR +
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
E+ M RG V + V++ L+ G C+ + L M+ G P ++ ++
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 376 VSK 378
SK
Sbjct: 297 CSK 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 101/230 (43%), Gaps = 8/230 (3%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL--AVEVDACCMNILIKGLCQQ 203
M + C P TF ++N L G V +A + VE +I GLC+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCE------GRVLQALALVDRMVEEGHQPYGTIINGLCKM 54
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
G+ +A+ + + ++ ++ +V ++ ++ LC+ G A +M G+ PDV+ +
Sbjct: 55 GDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITY 114
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
+ +I +L M+ + P+V ++ ++ L+ + EA E+ M+
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 324 RGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
RG P+ +++ ++ G C+ R + L M + P + + ++N
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 2/177 (1%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRI 136
+ NP ++LI L + + L+R F + ++I + R+
Sbjct: 139 ERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK-QDRL 197
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
+ A L SM C P TF+ ++N + D E++ R + + L
Sbjct: 198 NDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTL 257
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
I G CQ G+L AA + + SG+ PN TF +++ LC K + +AF LE ++K
Sbjct: 258 IHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 39/207 (18%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D L+ GLC +G + A+ + D + G +P + T+++GLC+ G E A L
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLL 64
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
KME+ + VV++N +I D + + G +
Sbjct: 65 SKMEETHIKAHVVIYNAII----------------DRLCKDGHH---------------- 92
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
I A + M +G P +++ ++ CR R + + LR M+ + P + +
Sbjct: 93 ---IHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTF 149
Query: 369 RHIVNCAVSKPRNYESTCVSLDEILEG 395
++N V + + E+ + D + G
Sbjct: 150 SALINALVKEGKVSEAEEIYGDMLRRG 176
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 101/235 (42%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A+E L M C+P T+N ++N + V + +E++ N L+
Sbjct: 262 RAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL 321
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
LC ++ + ++ P V T++ L++GLC+ ++ A ++ +M +
Sbjct: 322 HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCL 381
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
PD+V +N ++ +L ++ P + +Y V+ GL +ALE+
Sbjct: 382 PDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALEL 441
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
M+ G P ++ + L+ G CR EE L++ +G R +R ++
Sbjct: 442 YHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 1/244 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++DKA+ L M P T+N ++ L A + E D N
Sbjct: 154 QLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYN 213
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+I+ + G A++ + + ++G P + T++ L+ +C A E LE M
Sbjct: 214 TVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVE 273
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD+V +N L+ V+ ++ G N +Y +L+ L + + E
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
E++ M + P+ +++ L+ GLC+ R QM+ Q +P + + ++
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG- 392
Query: 375 AVSK 378
A+SK
Sbjct: 393 AMSK 396
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D+ E L M P+ T+N ++N L RL A + + D N +
Sbjct: 331 DEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTV 390
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ + ++G + A+++ + P + T+++++ GL +KG++++A E +M G+
Sbjct: 391 LGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGI 450
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PD + LI VL +G +Y+ V+ GL K A+E
Sbjct: 451 FPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIE 510
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGL 340
VVE M++ G P + +V G+
Sbjct: 511 VVEIMLTGGCKPDETIYTAIVKGV 534
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 77/190 (40%)
Query: 78 RKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRID 137
+ + PT LI L A LL +Q L+++ D + + +D
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A+E L + + C P T+N V++ L L A E+Y + D LI
Sbjct: 402 DAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLI 461
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G C+ + A +V E G T+ ++ GLC+K +E A E +E M G
Sbjct: 462 YGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCK 521
Query: 258 PDVVVFNVLI 267
PD ++ ++
Sbjct: 522 PDETIYTAIV 531
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N ++ LC G+L+ A K+ + + P+ + S L+ GL +++A L M
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G PD + +N++I +L+ M G P+V +Y V+ + D +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A+ + + G P +++ LV +CR+ + L M +G P + + +VN
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 115/272 (42%)
Query: 77 ARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRI 136
AR + P P C++L+ LA + LD +L + D + +I I
Sbjct: 131 ARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHI 190
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
A+ L M P T+N V+ + + A ++ + +L
Sbjct: 191 RTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVL 250
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
++ +C+ + A++V ++ G P++ T+++L++ C +G +EE ++ + G+
Sbjct: 251 VELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGL 310
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
+ V +N L+ +L++M + + P V +Y ++ GL A+ A++
Sbjct: 311 ELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAID 370
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
M+ + +P V++ ++ + + ++
Sbjct: 371 FFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 36/284 (12%)
Query: 130 AHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVD 189
HV R +E + D PS R FN +LN +R A +++E + V+
Sbjct: 226 GHV-REASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPT 284
Query: 190 ACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE 249
LI+G C+ + A++V +E + +E N F+ ++ GL E G + EA +E
Sbjct: 285 VVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMME 344
Query: 250 KMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ--------- 300
+ C P +V +N L+ +L MM+ +G P +Y
Sbjct: 345 RFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHN 404
Query: 301 --------------------------VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
+L L + + A++V + M +RG P ++
Sbjct: 405 KTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTT 464
Query: 335 QLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
L+ LCR EE VR+G +P+ ++ I N SK
Sbjct: 465 MLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSK 508
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGE-VYEA--APRLAVEVDACCMNILIKGLCQQ 203
P F PS F+ V+N L R +++A V++ + + V A +LI+ +
Sbjct: 129 PGFTLSPS--LFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARA 186
Query: 204 GELSAAVKVFDEFPKSGLEP------NVRTFSTLMHGLCEKGMVEEAFEWLEKME---KC 254
G + A++ F EF +S EP +R L+ LC++G V EA +LE++
Sbjct: 187 GMVQQAIRAF-EFARS-YEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDS 244
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
P V +FN+L+ + + M P V +Y ++ G +R A
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR 358
+EV+E M +F+ F ++ GL R E AL M R
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSE---ALGMMER 345
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/339 (20%), Positives = 147/339 (43%), Gaps = 9/339 (2%)
Query: 50 LTPKQATT-----LCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPI 104
LT KQ + L S N+P + + + D++ + + LA +
Sbjct: 35 LTSKQKKSRDTLSLLKSENNPDRILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAV 94
Query: 105 HTLLHQTLKRRS--FSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVL 162
LL ++ + S+ F I LY A +D++++T ++ ++ + ++ N +L
Sbjct: 95 SQLLDGFIQNQPDPKSESFAVRAIILYGR-ANMLDRSIQTFRNLEQYEIPRTVKSLNALL 153
Query: 163 NVLVANRLYDVAGEVYEAAPRL-AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
+ + Y A VY P++ +E D N +I+ LC+ G S++ + E + +
Sbjct: 154 FACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWI 213
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
+P +F ++ G ++ +E + + M++ GV V +N++I
Sbjct: 214 KPTAASFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKA 273
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
++D ++ PN +Y +++G + EA+ + E MV G+ P + L+ LC
Sbjct: 274 LIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLC 333
Query: 342 RHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
+ E R+ + + +VP + + +VN S+ +
Sbjct: 334 KGGDFETALILCRESMEKNWVPSFSVMKWLVNGLASRSK 372
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 1/235 (0%)
Query: 130 AHVARRIDKAVETLLS-MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV 188
A+V +R VE +L M ++ T+ ++ + V N A ++++ +E
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D LI C++G + A +FDE + GL P+ T+ L+ G+C+ G + A +
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+M+ GV VVFN LI + D+M +KGF +V + +
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
KR+ EA + + M+ G S VS+ L+ C+ EE +M +G P
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP 502
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 118/273 (43%), Gaps = 13/273 (4%)
Query: 27 WFCTQPNTDRDTAILARFQQKDWLTPKQAT------TLCNSLNHPSSAVTLLHLYTARKD 80
W C + N R + +K L+P T +C ++ + + + + K
Sbjct: 338 WNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS--KG 394
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF--TLIKLYAHVARRIDK 138
N T+ +LI ++D ++++ ++++ F D F T+ + + +R D+
Sbjct: 395 VNITQVVFNTLIDGYCRKGMVDE-ASMIYDVMEQKGFQADVFTCNTIASCFNRL-KRYDE 452
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A + L M + S ++ +++V + A ++ V+ +A N++I
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
C+QG++ A K+ +G++P+ T+++L+HG C V+EA +M G+
Sbjct: 513 AYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQ 572
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+ V + V+I + D M RKG+
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 108/267 (40%), Gaps = 36/267 (13%)
Query: 169 RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
R D+ E++ V++ + I+++GLC++GE+ + K+ EF G++P T+
Sbjct: 203 RRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTY 262
Query: 229 STLMHGLCEK-----------------------------------GMVEEAFEWLEKMEK 253
+T+++ ++ G + +A + ++M +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ DV V+ LI + D + KG P+ +Y ++ G+
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
A ++ M S+G + V F L+ G CR +E M ++GF + I +
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIAS 442
Query: 374 CAVSKPRNYESTCVSLDEILEGCNHLT 400
C ++ + Y+ L ++EG L+
Sbjct: 443 C-FNRLKRYDEAKQWLFRMMEGGVKLS 468
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
Query: 160 FVLNVLVA--NRL--YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE 215
F N + + NRL YD A + V++ LI C++G + A ++F E
Sbjct: 435 FTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVE 494
Query: 216 FPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
G++PN T++ +++ C++G ++EA + ME G+ PD + LI
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADN 554
Query: 276 XXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ M KG N +Y ++ GL A + EA + + M +G+
Sbjct: 555 VDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/205 (17%), Positives = 86/205 (41%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
+ V V V N +++ V++ + + +D + + ++ + +++F
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 219 SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXX 278
SG++ V + + ++ GLC +G VE++ + +++ G+ P+ +N +I
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 279 XXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVV 338
VL +M + G N +Y ++ + + +A ++ + M RG + L+
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 339 GLCRHRRTEEVDWALRQMVRQGFVP 363
CR + ++ +G P
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSP 362
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 138/336 (41%), Gaps = 12/336 (3%)
Query: 54 QATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
QA + +++ ++A+ + + F T+++ L A I+ LL + ++
Sbjct: 328 QANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVR 387
Query: 114 RRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD 172
+ + LI Y A + +A+ M + C P R T+ ++++ D
Sbjct: 388 DGCKPNTVTYNRLIHSYGR-ANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLD 446
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
+A ++Y+ + D +++I L + G L AA ++F E G PN+ TF+ ++
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
+ E A + M+ G PD V +++++ V M RK +
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 293 PNVGSYQQVLYGLL-----DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
P+ + +YGLL A +A + + M+ G P+ + L+ R R
Sbjct: 567 PD-----EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMS 621
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYE 383
E L+ M+ G P + + +++C N++
Sbjct: 622 EAYNLLQSMLALGLHPSLQTYTLLLSCCTDARSNFD 657
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Query: 136 IDKAVETLLSMPD-FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+D+AVE +P C + +N +L+ L +++ A + R ++ D
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
IL+ G C G++ A + DE + G P R L+ GL G +E A E + KM K
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD+ FN+LI + + G ++ +Y+ ++ + + EA
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
++ V G P + ++ G+CR+
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRN 370
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 1/240 (0%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR-LAVEVDACC 192
++ + + L M D S T F++ N D A E++ P+ L +
Sbjct: 125 KKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDV 184
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
N L+ LC A + + GL+P+ RT++ L++G C G ++EA E+L++M
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMS 244
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ G P ++LI ++ M + GF P++ ++ ++ + +
Sbjct: 245 RRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVE 304
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+E+ G ++K L+ + + + +E L V G P ++ I+
Sbjct: 305 FCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPII 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 92/235 (39%), Gaps = 11/235 (4%)
Query: 129 YAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV 188
YA + R I K ++ P +RT+ ++N + A E + R
Sbjct: 202 YALIRRMIRKGLK-----------PDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNP 250
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
A ++LI+GL G L +A ++ + K G P+++TF+ L+ + + G VE E
Sbjct: 251 PARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMY 310
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
K G+C D+ + LI +L+ V G P Y ++ G+
Sbjct: 311 YTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRN 370
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
F +A M + P+ + L+ R + + L +M G VP
Sbjct: 371 GMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 157 TFNFVLNVLVANRLYDVAGEVY-EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE 215
T + V+ L + Y+ A + + E V+ D MN L+ L ++ + A +VF +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 216 FPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
+ ++P+ RTF+ L+HG C+ ++A ++ M+ PDVV + +
Sbjct: 265 LFDT-IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 276 XXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQ 335
+L+ M G PNV +Y V++ L +K+ EAL V E M G VP +
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 336 LVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRN 381
L+ L + R ++ M QG + ++ +++ A+ R+
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRD 429
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 7/238 (2%)
Query: 124 TLIKLYAHVAR--RIDKAVETLLSM-PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEA 180
T+ K+ +A+ + +KAV+ L M + N +++ LV + A EV+
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++ DA NILI G C+ + A + D + P+V T+++ + C++G
Sbjct: 265 LFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
E LE+M + G P+VV + +++ V + M G P+ Y
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR 358
+++ L RF +A E+ E M ++G + + ++ H R E ALR + R
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDE---MALRLLKR 438
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 105/276 (38%), Gaps = 39/276 (14%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
I+ A E L + D P RTFN +++ R +D A + + D
Sbjct: 255 IEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTS 313
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
++ C++G+ ++ +E ++G PNV T++ +MH L + V EA EKM++ G
Sbjct: 314 FVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDG 373
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD------AK 309
PD ++ LI + + M +G +V Y ++ L A
Sbjct: 374 CVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMAL 433
Query: 310 RFIEALEVVEG--------------------------------MVSRGFVPSFVSFKQLV 337
R ++ +E EG MV ++ L+
Sbjct: 434 RLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLI 493
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
GLC + EE + VR+G VPR + +V+
Sbjct: 494 RGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVD 529
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 6/217 (2%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
RR++ E L M + C P+ T+ V++ L ++ A VYE DA
Sbjct: 325 RRVN---EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
+ LI L + G A ++F++ G+ +V ++T++ E A L++ME
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 254 ---CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
P+V + L+ +L MV+ +V +Y ++ GL + +
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
EA E V +G VP + K LV L + E
Sbjct: 502 VEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAE 538
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 138/345 (40%), Gaps = 49/345 (14%)
Query: 75 YTARKDFNPTE-PFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVA 133
++ +KD++ E P + + LD + +L + +SF D + +++ +
Sbjct: 72 FSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYD---DCLSIHSSIM 128
Query: 134 R------RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVE 187
R ++D A+ M P T N +LN L + A + +
Sbjct: 129 RDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPS 188
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE----- 242
+ N LIKGLC + A+ +F+ K G+ PN T + ++H LC+KG++
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 243 ----------------------------------EAFEWLEKMEKCGVCPDVVVFNVLIX 268
+A E ++M + V D VV+NV+I
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+ MV++G P+V +Y ++ L +F EA ++ M + G P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+S+K ++ GLC H + L M++ +P + +W +++
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVID 413
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 99/242 (40%), Gaps = 35/242 (14%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A EV++ + V D+ N++I+GLC G + AA + K G+ P+V T++TL+
Sbjct: 284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLIS 343
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPD---------------------------------- 259
LC++G +EA + M+ GV PD
Sbjct: 344 ALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLP 403
Query: 260 -VVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
V+++NV+I VL++M+ G PNV + +++G + R I+A V
Sbjct: 404 EVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVK 463
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
M S P ++ L+ C +M+R+G P + + +V K
Sbjct: 464 NEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWK 523
Query: 379 PR 380
R
Sbjct: 524 GR 525
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 98/214 (45%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ D+A + +M + P + ++ ++ L + + A E + + ++ + N
Sbjct: 350 KFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWN 409
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++I G + G+ S+A+ V + G++PNV T + L+HG + G + +A+ +M
Sbjct: 410 VVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRST 469
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
+ PD +N+L+ + D M+R+G P++ +Y +++ GL R +A
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
++ + + G V F L R +R E
Sbjct: 530 ESLLSRIQATGITIDHVPFLILAKKYTRLQRPGE 563
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P T+N +++ L +D A +++ V D ++I+GLC G+++ A +
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
KS L P V ++ ++ G G A L M GV P+V N LI
Sbjct: 393 LLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVK 452
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V + M +P+ +Y +L A ++ + M+ RG P ++
Sbjct: 453 GGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIIT 512
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ +LV GLC R ++ + L ++ G
Sbjct: 513 YTELVRGLCWKGRLKKAESLLSRIQATGI 541
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 114/267 (42%), Gaps = 5/267 (1%)
Query: 102 DPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFV 161
D I ++ K F + ++ + A D+A+ L P+F +N V
Sbjct: 112 DLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLV 171
Query: 162 LNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
+ + ++A + + + + D +I G C G++ A ++ E K
Sbjct: 172 IRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDC 231
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG----VCPDVVVFNVLIXXXXXXXXXX 277
N T+S ++ G+C+ G +E A E L +MEK + P+ V + ++I
Sbjct: 232 VLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVE 291
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL-EVVEGMVSRGFVPSFVSFKQL 336
VLD M +G PN + ++ G+L+ ++AL ++++ +V G V F
Sbjct: 292 EALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSA 351
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVP 363
V L R +R EE + R M+ +G P
Sbjct: 352 TVSLIRMKRWEEAEKIFRLMLVRGVRP 378
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 27/271 (9%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTL-IKLYAHVARRIDKAVETLLSMPDF 149
++T ANL D +L + + +D + L I+L+A + D + +L + +
Sbjct: 136 VLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFAD---KGDLNIADML-IKEM 191
Query: 150 QC---WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA--CCMNI-----LIKG 199
C +P T+ ++N Y AG++ + A RLA E+ C +N +++G
Sbjct: 192 DCVGLYPDVITYTSMING------YCNAGKI-DDAWRLAKEMSKHDCVLNSVTYSRILEG 244
Query: 200 LCQQGELSAAVKVFDEFPKSG----LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+C+ G++ A+++ E K + PN T++ ++ CEK VEEA L++M G
Sbjct: 245 VCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRG 304
Query: 256 VCPDVVVFNVLIX-XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
P+ V VLI ++D +V+ G + L+ KR+ EA
Sbjct: 305 CMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEA 364
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
++ M+ RG P ++ + LC R
Sbjct: 365 EKIFRLMLVRGVRPDGLACSHVFRELCLLER 395
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 131/318 (41%), Gaps = 9/318 (2%)
Query: 67 SAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTL- 125
+A++L + + P++ L L I +L + ++ S D F
Sbjct: 187 AALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNAY 246
Query: 126 --IKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
+ Y A +++ A + C +T+N ++ + + L A E+YE+ +
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
+D ++I L + G L AA K+F + + L P+ FS+L+ + + G ++
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLY 303
+ + +M+ G P +F LI + D M + GF PN G Y ++
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 304 GLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR---QMVRQG 360
+ + A+ V + M GF+P+ ++ L L H + +VD A++ M G
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCL---LEMHAGSGQVDSAMKIYNSMTNAG 483
Query: 361 FVPRMGMWRHIVNCAVSK 378
P + + ++ +K
Sbjct: 484 LRPGLSSYISLLTLLANK 501
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 88/224 (39%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
KA E SM T+ ++ L + D A ++++ + + L+
Sbjct: 296 KAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV 355
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
+ + G L ++KV+ E G P+ F +L+ + G ++ A ++M+K G
Sbjct: 356 DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFR 415
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P+ ++ ++I V M + GF P +Y +L + + A+++
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
M + G P S+ L+ L R + L +M G+
Sbjct: 476 YNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGY 519
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++ K + L + P+ T+ +LN R A ++ ++ D N
Sbjct: 278 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHN 337
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++++GL + + S A+K+F G PNVR+++ ++ C++ +E A E+ + M
Sbjct: 338 VMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PD V+ LI +L M KG P+ +Y ++ + + K A
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHA 457
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ M+ PS +F ++ R E +M+++G P + ++
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 375 AVSKPRNYESTCVSLDEILE 394
+ + ++ E+ C L+E+L+
Sbjct: 518 LIGEGKSREA-CRYLEEMLD 536
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 80/166 (48%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I+ C+Q + A++ FD+ SGL+P+ ++ L+ G + ++ +E L++M++
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD +N LI + + M++ P++ ++ ++ A+ +
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMG 492
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V E M+ +G P S+ L+ GL ++ E L +M+ +G
Sbjct: 493 RAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 3/208 (1%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
TF + A + A ++E + ++ +N L+ L + A +FD+
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 217 PKSGLEPNVRTFSTLMHGLCE-KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
K PN+ T++ L++G C + ++E A W + +++ G+ PD+V NV++
Sbjct: 291 -KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQ-GLKPDIVAHNVMLEGLLRSRK 348
Query: 276 XXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQ 335
+ +M KG PNV SY ++ A+E + MV G P +
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 336 LVVGLCRHRRTEEVDWALRQMVRQGFVP 363
L+ G ++ + V L++M +G P
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPP 436
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 89/215 (41%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
+R+ A++ M P+ R++ ++ + A E ++ ++ DA
Sbjct: 346 SRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAV 405
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
LI G Q +L ++ E + G P+ +T++ L+ + + M E A KM
Sbjct: 406 YTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMI 465
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
+ + P + FN+++ V + M++KG P+ SY ++ GL+ +
Sbjct: 466 QNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSR 525
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
EA +E M+ +G + + + R + E
Sbjct: 526 EACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPE 560
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Query: 171 YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
YD+ E E + +D C N+ L + G++ A+++F E G+ P+V ++T
Sbjct: 381 YDLFKEFRETN----ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKG 290
L+ G C +G +AF+ + +M+ G PD+V++NVL L MM +G
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 291 FYPNVGSYQQVLYGLLD------AKRFIEALE 316
P ++ V+ GL+D A+ F E+LE
Sbjct: 497 VKPTYVTHNMVIEGLIDAGELDKAEAFYESLE 528
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 88/206 (42%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
RI+ A +L M P ++ ++ N A +V+ + ++ ++
Sbjct: 306 RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVS 365
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
+++ CQ G S A +F EF ++ + + ++ L + G VEEA E +M
Sbjct: 366 SILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGK 425
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PDV+ + LI ++ M G P++ Y + GL EA
Sbjct: 426 GIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEA 485
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGL 340
E ++ M +RG P++V+ ++ GL
Sbjct: 486 FETLKMMENRGVKPTYVTHNMVIEGL 511
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 61/124 (49%)
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAF 245
V+ D +LI C+ G+L A ++FD+ +SG++P+ ++ L+ C+ G ++EA
Sbjct: 757 VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 246 EWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGL 305
++M + GV PDVV + LI ++ M+ KG P S V Y
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAK 876
Query: 306 LDAK 309
L AK
Sbjct: 877 LKAK 880
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 80 DFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKA 139
D P + T +I + H N L ++ L + +KRR D + L R + +
Sbjct: 693 DVIPDVVYYTIMINRYCHLNDLKKVYALF-KDMKRREIVPDVVTYTVLLKNKPERNLSRE 751
Query: 140 VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDV--AGEVYEAAPRLAVEVDACCMNILI 197
++ PD F + + + ++ D+ A +++ V+ DA LI
Sbjct: 752 MKAFDVKPD--------VFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
C+ G L A +FD +SG++P+V ++ L+ G C G V +A + +++M + G+
Sbjct: 804 ACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIK 863
Query: 258 P 258
P
Sbjct: 864 P 864
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 98/261 (37%), Gaps = 48/261 (18%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A ETL M + P+ T N V+ L+ D A YE+ + E DA ++
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MV 539
Query: 198 KGLCQQGELSAAVKVFD--EFP-------------------------------KSGLEPN 224
KG C G L A + F EFP K G+EP
Sbjct: 540 KGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPE 599
Query: 225 VRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLD 284
+ L+ C V +A E+ E + + PD+ + ++I + +
Sbjct: 600 KSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFE 659
Query: 285 MMVRKGFYPNVGSYQQVLYG--LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
M R+ P+V +Y +L LD KR +EA +V +P V + ++ C
Sbjct: 660 DMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV---------IPDVVYYTIMINRYCH 710
Query: 343 HRRTEEVDWALRQMVRQGFVP 363
++V + M R+ VP
Sbjct: 711 LNDLKKVYALFKDMKRREIVP 731
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%)
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++ D + +I+G + + AV VF++ K N S+++ C+ G EA
Sbjct: 321 GIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEA 380
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
++ ++ + + D V +NV + M KG P+V +Y ++ G
Sbjct: 381 YDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGG 440
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ +A +++ M G P V + L GL + +E L+ M +G P
Sbjct: 441 CCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/235 (20%), Positives = 89/235 (37%), Gaps = 6/235 (2%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A + ++ M P +N + L N L A E + V+ N++I+
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
GL GEL A ++ E + ++++ G C G ++ AFE ++E P
Sbjct: 510 GLIDAGELDKAEAFYESLEHKSREND----ASMVKGFCAAGCLDHAFERFIRLE--FPLP 563
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVV 318
V F + +LD M + G P Y +++ +A E
Sbjct: 564 KSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFF 623
Query: 319 EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
E +V++ VP ++ ++ CR ++ M R+ P + + ++N
Sbjct: 624 EILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN 678
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 7/145 (4%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D +L+K ++ LS +K FD ++P+V ++ L+ C+ G + EA
Sbjct: 732 DVVTYTVLLKNKPERN-LSREMKAFD------VKPDVFYYTVLIDWQCKIGDLGEAKRIF 784
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M + GV PD + LI + D M+ G P+V Y ++ G
Sbjct: 785 DQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRN 844
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSF 333
++A+++V+ M+ +G P+ S
Sbjct: 845 GFVLKAVKLVKEMLEKGIKPTKASL 869
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 118/255 (46%), Gaps = 11/255 (4%)
Query: 92 ITKLAHANLLDPIHTLLHQTLKRRSFSD----------DFFFTLIKLYAHVARRIDKAVE 141
+T+ ++ L+ + L H + R F D D + ++++ + I+ A+E
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIE-AIE 428
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
L + + +N V + L + +++E + D NILI
Sbjct: 429 MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
+ GE+ A+ +F+E +S +P++ ++++L++ L + G V+EA ++M++ G+ PDVV
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM 321
++ L+ + + M+ KG PN+ +Y +L L R EA+++ M
Sbjct: 549 TYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Query: 322 VSRGFVPSFVSFKQL 336
+G P +++ L
Sbjct: 609 KQQGLTPDSITYTVL 623
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 127/279 (45%), Gaps = 12/279 (4%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA-NRLYDVAGEVYEA 180
+ TL+++ A + +DKA++ M + C P+ T++ +LN+LVA +L + G V E
Sbjct: 308 YNTLMQVLAK-GKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDG-VVEI 365
Query: 181 APRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE---FPKSGLEPNVRTFSTLMHGLCE 237
+ R + + L++ L + G +S A ++F + FP G ++ +++ LC
Sbjct: 366 SKRYMTQ---GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERD---SYMSMLESLCG 419
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
G EA E L K+ + GV D +++N + + + M + G P++ +
Sbjct: 420 AGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFT 479
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
Y ++ EA+ + E + P +S+ L+ L ++ +E ++M
Sbjct: 480 YNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 358 RQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEGC 396
+G P + + ++ C R + + + +++GC
Sbjct: 540 EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGC 578
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 174 AGEVYEAAPRLA------VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
AG+ EA L+ V D N + L + ++S +F++ K G P++ T
Sbjct: 420 AGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFT 479
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMV 287
++ L+ G V+EA E++E+ PD++ +N LI M
Sbjct: 480 YNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 288 RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
KG P+V +Y ++ +R A + E M+ +G P+ V++ L+ L ++ RT
Sbjct: 540 EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTA 599
Query: 348 EVDWALRQMVRQGFVP 363
E +M +QG P
Sbjct: 600 EAVDLYSKMKQQGLTP 615
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 22/279 (7%)
Query: 51 TPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTS-LITKLAHANL---LDPIHT 106
TP +A+ + SLN P AV L + ++ +PF + +I L+ +NL D + +
Sbjct: 98 TPDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRS 157
Query: 107 LLHQTLKRRSFSD-DFFFTLIKLYAHVAR-----RIDKAVETLLSMPDFQCWPSRRTFNF 160
+L +K + LI + + R+ K + L M F T+
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWD--LKMNSF-------TYKC 208
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG 220
+L + +R Y A +VY R ++D N+L+ L + A +VF++ K
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRH 265
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
+ T++ ++ + G +EA +M G+ +VV +N L+
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
V MV G PN +Y +L L+ + + VVE
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE 364
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 152/382 (39%), Gaps = 48/382 (12%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTAR-KDFNPTEPFCTSLITKLAHANLLDPIHTLL 108
LTP + + +P +A+ L R + ++I L +N + + ++
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVI 69
Query: 109 HQTLKRRSFS--DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
+ +K S D F ++I+ ++ A R++ A+ S+ +F C +F+ +L +V
Sbjct: 70 ER-MKEDSCECKDSVFASVIRTFSR-AGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 167 ANRLYDVAGEVY-EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
+ A ++ + V +N+L+K LCQ A +VF E G P+
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKM----EKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
++ LM G C +G +EEA L M + G D+VV+ +L+
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 282 VLDMMVRKGF-------------------------------------YPNVGSYQQVLYG 304
+L ++RKG P + SY +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF-VP 363
L + + +E EV+ M S+GF P+ + V LCR + +E + + + QG +P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 364 RMGMWRHIVNCAVSKPRNYEST 385
+G++ ++ ++ E+
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAV 389
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC-P 258
L ++G+L +V G EP + + LC G ++EA + K G C P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK-GFYPNVGSYQQVLYGLLDAKRFIEALEV 317
V V+NVLI L M ++ N +YQ ++ GL +F+EA +V
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCR-HRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
+E M+ + P ++ ++ GLC RR E V W L +MV Q VP +W+ +
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMW-LEEMVSQDMVPESSVWKALA---- 482
Query: 377 SKPRNYESTCVSLDEILEGCNHL 399
ES C +++E HL
Sbjct: 483 ------ESVCFCAIDVVEILEHL 499
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 152/382 (39%), Gaps = 48/382 (12%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTAR-KDFNPTEPFCTSLITKLAHANLLDPIHTLL 108
LTP + + +P +A+ L R + ++I L +N + + ++
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVI 69
Query: 109 HQTLKRRSFS--DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV 166
+ +K S D F ++I+ ++ A R++ A+ S+ +F C +F+ +L +V
Sbjct: 70 ER-MKEDSCECKDSVFASVIRTFSR-AGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 167 ANRLYDVAGEVY-EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
+ A ++ + V +N+L+K LCQ A +VF E G P+
Sbjct: 128 KESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKM----EKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
++ LM G C +G +EEA L M + G D+VV+ +L+
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 282 VLDMMVRKGF-------------------------------------YPNVGSYQQVLYG 304
+L ++RKG P + SY +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF-VP 363
L + + +E EV+ M S+GF P+ + V LCR + +E + + + QG +P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 364 RMGMWRHIVNCAVSKPRNYEST 385
+G++ ++ ++ E+
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAV 389
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 14/203 (6%)
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC-P 258
L ++G+L +V G EP + + LC G ++EA + K G C P
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLP 367
Query: 259 DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK-GFYPNVGSYQQVLYGLLDAKRFIEALEV 317
V V+NVLI L M ++ N +YQ ++ GL +F+EA +V
Sbjct: 368 TVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQV 427
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCR-HRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAV 376
+E M+ + P ++ ++ GLC RR E V W L +MV Q VP +W+ +
Sbjct: 428 MEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMW-LEEMVSQDMVPESSVWKALA---- 482
Query: 377 SKPRNYESTCVSLDEILEGCNHL 399
ES C +++E HL
Sbjct: 483 ------ESVCFCAIDVVEILEHL 499
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Query: 152 WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
+P T+N +L R + EVY+ ++ D N +I +QG+L A++
Sbjct: 364 FPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQ 423
Query: 212 VFDEFPK-SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
++ + SG P+ T++ L+ L + EA + +M G+ P + ++ LI
Sbjct: 424 LYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGY 483
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
M+R G P+ +Y +L LL +A + M+S G PS+
Sbjct: 484 AKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSY 543
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQM 356
++ +++GL + R++++ +R M
Sbjct: 544 TLYELMILGLMKENRSDDIQKTIRDM 569
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 105/246 (42%), Gaps = 17/246 (6%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEV------- 188
+D AV+ M +C P T+N +++V Y G EA RL +E+
Sbjct: 313 LDGAVKVFEDMEAHRCQPDLWTYNAMISV------YGRCGLAAEA-ERLFMELELKGFFP 365
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
DA N L+ ++ +V+ + K G + T++T++H ++G ++ A +
Sbjct: 366 DAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLY 425
Query: 249 EKMEK-CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD 307
+ M+ G PD + + VLI ++ M+ G P + +Y ++ G
Sbjct: 426 KDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAK 485
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL-RQMVRQGFVPRMG 366
A + EA + M+ G P +++ ++ L R T + W L R M+ G P
Sbjct: 486 AGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKA-WGLYRDMISDGHTPSYT 544
Query: 367 MWRHIV 372
++ ++
Sbjct: 545 LYELMI 550
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 8/254 (3%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNV-LVANRLY-DVAGEVYEAAPRLAVEVDACC 192
+ KA E + +M C P +FN ++N L + L ++A E+ + + DA
Sbjct: 240 KFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAIT 299
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM--HGLCEKGMVEEAFEWLEK 250
N L+ + L AVKVF++ +P++ T++ ++ +G C G+ EA +
Sbjct: 300 YNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC--GLAAEAERLFME 357
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
+E G PD V +N L+ V M + GF + +Y +++ +
Sbjct: 358 LELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQ 417
Query: 311 FIEALEVVEGMVS-RGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWR 369
AL++ + M G P +++ L+ L + RT E + +M+ G P + +
Sbjct: 418 LDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 370 HIVNCAVSKPRNYE 383
++ C +K E
Sbjct: 478 ALI-CGYAKAGKRE 490
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/241 (18%), Positives = 96/241 (39%), Gaps = 1/241 (0%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P +T+N +++ Y+ A ++ R +NIL+ LC G L V
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+E G + + + ++ G + E + M+ G P + ++ ++I
Sbjct: 845 VEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCK 904
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
++ M F + + +L + + + ++V + + G P +
Sbjct: 905 GKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETT 964
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEI 392
+ L++ CR RR EE ++QM G P++ ++ +++ A K + E +E+
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS-AFGKQKCLEQAEQLFEEL 1023
Query: 393 L 393
L
Sbjct: 1024 L 1024
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/177 (19%), Positives = 74/177 (41%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I+ +Q A V +SG P+++T+++LM + G E A M + G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
P V N+L+ V++ + GF + S +L A E
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
++ M + G++P+ ++ ++ LC+ +R + + + +M F + +W ++
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/209 (14%), Positives = 85/209 (40%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ + N +L+ L + + V E + ++ + +++ + G + K+
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKI 879
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ +G P +R + ++ LC+ V +A + +ME+ ++ ++N ++
Sbjct: 880 YSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTA 939
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V + G P+ +Y ++ +R E +++ M + G P +
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+K L+ + + E+ + +++ +G
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 134/327 (40%), Gaps = 12/327 (3%)
Query: 54 QATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
QA + +N +A+ + + F T+++ L A I+ LL + ++
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 114 RRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD 172
+ + LI Y A +++A+ M + C P R T+ ++++ D
Sbjct: 393 DGCQPNTVTYNRLIHSYGR-ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
+A ++Y+ + D +++I L + G L AA K+F E G PN+ T++ +M
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
+ + A + M+ G PD V +++++ V M +K +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 293 PNVGSYQQVLYGLL-----DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
P+ + +YGLL A +A + + M+ G P+ + L+ R +
Sbjct: 572 PD-----EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNC 374
E L+ M+ G P + + +++C
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLLSC 653
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 87 FCTSLITKLAHANLLDPIHTLLHQTLKRRSFS-DDFFFTLIKLYAHVARRIDKAVETLLS 145
+CT LI A A LD I ++Q ++ S D F +++I A + A +
Sbjct: 437 YCT-LIDIHAKAGFLD-IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGE 205
M D C P+ T+N ++++ R Y A ++Y E D +I+++ L G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
L A VF E + P+ + L+ + G VE+A++W + M G+ P+V N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
L+ +L M+ G P++ +Y +L D + ++ + M S G
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++ K + L + P+ T+ +LN R A ++ ++ D N
Sbjct: 277 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 336
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++++GL + + S A+K+F G PNVR+++ ++ C++ +E A E+ + M
Sbjct: 337 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 396
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PD V+ LI +L M KG P+ +Y ++ + + K
Sbjct: 397 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 456
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ M+ PS +F ++ R E +M+++G P + ++
Sbjct: 457 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 516
Query: 375 AVSKPRNYESTCVSLDEILE 394
+S+ ++ E+ C L+E+L+
Sbjct: 517 LISEGKSREA-CRYLEEMLD 535
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I+ C+Q + A++ FD+ SGL+P+ ++ L+ G + ++ +E L++M++
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD +N LI + + M++ P++ ++ ++ A+ +
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 491
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V + M+ +G P S+ L+ GL ++ E L +M+ +G
Sbjct: 492 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 3/208 (1%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
TF + A + A ++E + ++ +N L+ L + A +FD+
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 217 PKSGLEPNVRTFSTLMHGLCE-KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
K PN+ T++ L++G C + ++E A W + ++ G+ PD+V NV++
Sbjct: 290 -KERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMK 347
Query: 276 XXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQ 335
+ +M KG PNV SY ++ A+E + MV G P +
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 336 LVVGLCRHRRTEEVDWALRQMVRQGFVP 363
L+ G ++ + V L++M +G P
Sbjct: 408 LITGFGTQKKLDTVYELLKEMQEKGHPP 435
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ R++ ++ + A E ++ ++ DA LI G Q +L ++
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
E + G P+ +T++ L+ + + M E KM + + P + FN+++
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V D M++KG P+ SY ++ GL+ + EA +E M+ +G +
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544
Query: 333 FKQLVVGLCRHRRTE 347
+ + R + E
Sbjct: 545 YNKFAADFHRGGQPE 559
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+++D E L M + P +T+N ++ ++ ++ + +Y + +E
Sbjct: 416 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 475
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N+++K V+DE K G+ P+ +++ L+ GL +G EA +LE+M
Sbjct: 476 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLD 535
Query: 254 CGVCPDVVVFN 264
G+ ++ +N
Sbjct: 536 KGMKTPLIDYN 546
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 112/260 (43%), Gaps = 1/260 (0%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++ K + L + P+ T+ +LN R A ++ ++ D N
Sbjct: 278 KLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHN 337
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++++GL + + S A+K+F G PNVR+++ ++ C++ +E A E+ + M
Sbjct: 338 VMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS 397
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ PD V+ LI +L M KG P+ +Y ++ + + K
Sbjct: 398 GLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHG 457
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ M+ PS +F ++ R E +M+++G P + ++
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRG 517
Query: 375 AVSKPRNYESTCVSLDEILE 394
+S+ ++ E+ C L+E+L+
Sbjct: 518 LISEGKSREA-CRYLEEMLD 536
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I+I+ C+Q + A++ FD+ SGL+P+ ++ L+ G + ++ +E L++M++
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G PD +N LI + + M++ P++ ++ ++ A+ +
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMG 492
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V + M+ +G P S+ L+ GL ++ E L +M+ +G
Sbjct: 493 RAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 100/248 (40%), Gaps = 15/248 (6%)
Query: 129 YAHVARRIDKAVETLLSMPDFQCWPS------------RRTFNFVLNVLVANRLYDVAGE 176
+AH +R + + L F+ S TF + A + A
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVG 250
Query: 177 VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC 236
++E + ++ +N L+ L + A +FD+ K PN+ T++ L++G C
Sbjct: 251 IFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLNGWC 309
Query: 237 E-KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
+ ++E A W + ++ G+ PD+V NV++ + +M KG PNV
Sbjct: 310 RVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
SY ++ A+E + MV G P + L+ G ++ + V L++
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 356 MVRQGFVP 363
M +G P
Sbjct: 429 MQEKGHPP 436
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 81/195 (41%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ R++ ++ + A E ++ ++ DA LI G Q +L ++
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
E + G P+ +T++ L+ + + M E KM + + P + FN+++
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V D M++KG P+ SY ++ GL+ + EA +E M+ +G +
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Query: 333 FKQLVVGLCRHRRTE 347
+ + R + E
Sbjct: 546 YNKFAADFHRGGQPE 560
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 61/131 (46%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+++D E L M + P +T+N ++ ++ ++ + +Y + +E
Sbjct: 417 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTF 476
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N+++K V+DE K G+ P+ +++ L+ GL +G EA +LE+M
Sbjct: 477 NMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLD 536
Query: 254 CGVCPDVVVFN 264
G+ ++ +N
Sbjct: 537 KGMKTPLIDYN 547
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 134/327 (40%), Gaps = 12/327 (3%)
Query: 54 QATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
QA + +N +A+ + + F T+++ L A I+ LL + ++
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 114 RRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD 172
+ + LI Y A +++A+ M + C P R T+ ++++ D
Sbjct: 393 DGCQPNTVTYNRLIHSYGR-ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
+A ++Y+ + D +++I L + G L AA K+F E G PN+ T++ +M
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
+ + A + M+ G PD V +++++ V M +K +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 293 PNVGSYQQVLYGLL-----DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
P+ + +YGLL A +A + + M+ G P+ + L+ R +
Sbjct: 572 PD-----EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNC 374
E L+ M+ G P + + +++C
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLLSC 653
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 87 FCTSLITKLAHANLLDPIHTLLHQTLKRRSFS-DDFFFTLIKLYAHVARRIDKAVETLLS 145
+CT LI A A LD I ++Q ++ S D F +++I A + A +
Sbjct: 437 YCT-LIDIHAKAGFLD-IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGE 205
M D C P+ T+N ++++ R Y A ++Y E D +I+++ L G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
L A VF E + P+ + L+ + G VE+A++W + M G+ P+V N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
L+ +L M+ G P++ +Y +L D + ++ + M S G
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 134/327 (40%), Gaps = 12/327 (3%)
Query: 54 QATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
QA + +N +A+ + + F T+++ L A I+ LL + ++
Sbjct: 333 QANQVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVR 392
Query: 114 RRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD 172
+ + LI Y A +++A+ M + C P R T+ ++++ D
Sbjct: 393 DGCQPNTVTYNRLIHSYGR-ANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
+A ++Y+ + D +++I L + G L AA K+F E G PN+ T++ +M
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
+ + A + M+ G PD V +++++ V M +K +
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 293 PNVGSYQQVLYGLL-----DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTE 347
P+ + +YGLL A +A + + M+ G P+ + L+ R +
Sbjct: 572 PD-----EPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIA 626
Query: 348 EVDWALRQMVRQGFVPRMGMWRHIVNC 374
E L+ M+ G P + + +++C
Sbjct: 627 EAYELLQNMLALGLRPSLQTYTLLLSC 653
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 3/240 (1%)
Query: 87 FCTSLITKLAHANLLDPIHTLLHQTLKRRSFS-DDFFFTLIKLYAHVARRIDKAVETLLS 145
+CT LI A A LD I ++Q ++ S D F +++I A + A +
Sbjct: 437 YCT-LIDIHAKAGFLD-IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGE 205
M D C P+ T+N ++++ R Y A ++Y E D +I+++ L G
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
L A VF E + P+ + L+ + G VE+A++W + M G+ P+V N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
L+ +L M+ G P++ +Y +L D + ++ + M S G
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTG 674
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 15/242 (6%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +IK Y A+ +KA+ M + WP T+N + +L L D EA
Sbjct: 518 YNVMIKAYGK-AKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD------EAQ 570
Query: 182 PRLAVEVDACC------MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
LA +D+ C +I + G LS AV +++ K+G++PN + +L++G
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
E GMVEEA ++ ME+ GV + +V LI V D M P+V
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGF--VPSFVSFKQLVVGLCRHRRTEEVDWAL 353
+ +L D EA + + +G V SF + L G+ EV +
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Query: 354 RQ 355
R+
Sbjct: 751 RE 752
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 60/128 (46%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N LI + G L+ A +F E KSG+ + TF+T++H G + EA L+KME+
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ PD +N+L+ + + G +P+ +++ VL+ L K E
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 314 ALEVVEGM 321
V+ M
Sbjct: 429 VEAVIAEM 436
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%)
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
TF+TL+ + G + +A +M K GV D V FN +I +L M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
KG P+ +Y +L DA ALE + G P V+ + ++ LC+ +
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 347 EEVDWALRQMVRQ 359
EV+ + +M R
Sbjct: 427 AEVEAVIAEMDRN 439
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 4/197 (2%)
Query: 135 RIDKAVETLLSMPDFQCW-PSRRTFNFVLNVLVAN--RLYDVAGEVYEAAPRLAVEVDAC 191
+ID+A L + DF P ++ L + +A V + P+ + +
Sbjct: 661 KIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNI 720
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSG-LEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
N+ I GLC+ G+L A K+F + S P+ T++ L+HG G + +AF ++
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M G+ P++V +N LI +L + +KG PN +Y ++ GL+ +
Sbjct: 781 MALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGN 840
Query: 311 FIEALEVVEGMVSRGFV 327
EA+ + E M+ +G V
Sbjct: 841 VAEAMRLKEKMIEKGLV 857
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 135/329 (41%), Gaps = 40/329 (12%)
Query: 71 LLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYA 130
++H+ + +++ T+ + L+ L H+ + + L + K SFS F ++K+YA
Sbjct: 110 MVHILSRARNYQQTKSYLCELVA-LNHSGFV--VWGELVRVFKEFSFSPTVFDMILKVYA 166
Query: 131 HVARRIDKAVETLLSMPDFQCWPS------------RRTFNFV-LNVLVANRLYDVAGEV 177
+ A+ +M ++ PS R+ NFV L+V ++V+ +V
Sbjct: 167 EKGL-VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDV 225
Query: 178 Y-----------------------EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFD 214
+ E L +E++ N LI G G++ +V
Sbjct: 226 FTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLR 285
Query: 215 EFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
+ G+ NV T+++L+ G C+KG++EEA E +++ + D ++ VL+
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
V D M+ G N ++ G + + +EA ++ M P ++
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 335 QLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
LV G CR +E QM ++ VP
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVP 434
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 36/262 (13%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +LI YA + ++ L M + + T+ ++ L + A V+E
Sbjct: 264 YNSLINGYAMIGD-VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE-------------------FPKSG-- 220
+ D +L+ G C+ G++ AV+V D + KSG
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 221 --------------LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
L+P+ T++TL+ G C G V+EA + ++M + V P V+ +N+L
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
+ + MM+++G + S +L L F EA+++ E +++RG
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 327 VPSFVSFKQLVVGLCRHRRTEE 348
+ ++ ++ GLC+ + E
Sbjct: 503 LTDTITLNVMISGLCKMEKVNE 524
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 117/273 (42%), Gaps = 2/273 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TL+ Y A +D+A++ M + P+ T+N +L + +++
Sbjct: 404 YNTLVDGYCR-AGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMM 462
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ V D + L++ L + G+ + A+K+++ GL + T + ++ GLC+ V
Sbjct: 463 LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKV 522
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA E L+ + P V + L V + M RKG +P + Y +
Sbjct: 523 NEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTL 582
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ G + + ++V + +RG P+ ++ L+ G C ++ +M+ +G
Sbjct: 583 ISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGI 642
Query: 362 VPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
+ + I N ++ + + C+ L +I++
Sbjct: 643 TLNVNICSKIAN-SLFRLDKIDEACLLLQKIVD 674
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 11/217 (5%)
Query: 154 SRRTFNFVLNVLVANRL---YDVAGEVYEAAPRL-------AVEVDACCMNILIKGLCQQ 203
+ + LNV+ N L Y + G+V E R+ V + LIKG C++
Sbjct: 251 TESSLGLELNVVTYNSLINGYAMIGDV-EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKK 309
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
G + A VF+ + L + + LM G C G + +A + M + GV + +
Sbjct: 310 GLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTIC 369
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
N LI + M P+ +Y ++ G A EAL++ + M
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQ 429
Query: 324 RGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
+ VP+ +++ L+ G R +V + M+++G
Sbjct: 430 KEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRG 466
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 26/303 (8%)
Query: 75 YTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHV 132
Y RK PT +LI+ L+ + L+ + L+ R + + LI + ++
Sbjct: 566 YMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE-LRARGLTPTVATYGALITGWCNI 624
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
IDKA T F+ T N + +AN L+ + ++ EA L VD
Sbjct: 625 GM-IDKAYATC-----FEMIEKGITLNVNICSKIANSLFRL-DKIDEACLLLQKIVD--- 674
Query: 193 MNILIKG---LCQQGELSA---------AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
++L+ G L + E SA A V + PK L PN ++ + GLC+ G
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 241 VEEAFEWLEKMEKCG-VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
+E+A + + PD + +LI + D M KG PN+ +Y
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
++ GL A ++ + +G P+ +++ L+ GL + E +M+ +
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEK 854
Query: 360 GFV 362
G V
Sbjct: 855 GLV 857
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 2/288 (0%)
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHV-ARRIDKAVETLLSMPDFQCWPSRRTFN 159
L +++ + KR D+ ++L+ + A+V A R + A L M P+ F+
Sbjct: 355 LKDAESMVSEMEKRGVSPDEHTYSLL-IDAYVNAGRWESARIVLKEMEAGDVQPNSFVFS 413
Query: 160 FVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS 219
+L + +V + + V+ D N++I + L A+ FD
Sbjct: 414 RLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE 473
Query: 220 GLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXX 279
G+EP+ T++TL+ C+ G A E E ME+ G P +N++I
Sbjct: 474 GIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDM 533
Query: 280 XXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
+L M +G PNV ++ ++ + RF +A+E +E M S G PS + L+
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCV 387
+ +E+ A R M G P + ++N R+ E+ V
Sbjct: 594 YAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 78/179 (43%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I L G A +F+E +SG++P R ++ L+ G + G +++A + +MEK G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
V PD +++LI VL M PN + ++L G D + +
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+V++ M S G P + ++ + + +M+ +G P W +++C
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDC 488
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 93/247 (37%), Gaps = 2/247 (0%)
Query: 83 PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHVARRIDKAVE 141
P F +I N LD T + L D + TLI + R I A E
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHI-VAEE 500
Query: 142 TLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLC 201
+M C P T+N ++N +D + + + L+
Sbjct: 501 MFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 560
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
+ G + A++ +E GL+P+ ++ L++ ++G+ E+A M G+ P ++
Sbjct: 561 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGM 321
N LI VL M G P+V +Y ++ L+ +F + V E M
Sbjct: 621 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Query: 322 VSRGFVP 328
+ G P
Sbjct: 681 IMSGCKP 687
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 118/303 (38%), Gaps = 21/303 (6%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-----LIKLYAHVARR 135
F+ E C + LA N + L Q + RR + T L+K
Sbjct: 123 FDHNEITCRDMACLLAKGNDFKGLWDFLRQ-VSRRENGKNVVTTASITCLMKCLGEEGF- 180
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA--PRLAVEVDACCM 193
+ +A+ T M ++ C P +N ++N L + A + + P D
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 194 NILIKGLCQQGELSA-----------AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
ILI C+ G + A ++F E G P+V T++ L+ G C+ +
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF-YPNVGSYQQV 301
A E E M+ G P+ V +N I ++ M + G P +Y +
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPL 360
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
++ L++ +R EA ++V MV G VP ++K + L +D L + +R+G
Sbjct: 361 IHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGI 420
Query: 362 VPR 364
R
Sbjct: 421 QQR 423
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 94/222 (42%), Gaps = 14/222 (6%)
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEW 247
V + L+K L ++G + A+ F + +P+V ++T+++ LC G ++A
Sbjct: 163 VTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFL 222
Query: 248 LEKMEKCG--VCPDVVVFNVLIXXXXXXXXXX-----------XXXXVLDMMVRKGFYPN 294
L++M+ G PD + +LI + M+ +GF P+
Sbjct: 223 LDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPD 282
Query: 295 VGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
V +Y ++ G R ALE+ E M ++G VP+ V++ + E +R
Sbjct: 283 VVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMR 342
Query: 355 QMVRQGF-VPRMGMWRHIVNCAVSKPRNYESTCVSLDEILEG 395
M + G VP + +++ V R E+ + ++ + G
Sbjct: 343 TMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAG 384
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%)
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
+V+ + G+ PN TF+ L + C E ++LEKME+ G PD+V +N L+
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+ +M R+ P++ +Y ++ GL R EA + MV RG P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPR 380
+S+ L+ C+ ++ L +M+ VP + IV V + R
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 110/275 (40%), Gaps = 2/275 (0%)
Query: 71 LLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYA 130
LLH+ + K F F LI + +D L+ T ++ F L+K Y
Sbjct: 119 LLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSAT-DECNWDPVVFDMLVKGYL 177
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
+ +++ + D S T N +LN L+ L + +VY R+ + +
Sbjct: 178 KLGL-VEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNT 236
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
NIL C ++ + G EP++ T++TL+ C +G ++EAF +
Sbjct: 237 YTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKI 296
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M + V PD+V + LI MV +G P+ SY ++Y
Sbjct: 297 MYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGM 356
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
++ +++ M+ VP + K +V G R R
Sbjct: 357 MQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 391
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D ++L+KG + G + +VF E SG +V T + L++GL + ++E+ ++
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
M + G+ P+ FN+L L+ M +GF P++ +Y ++
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
R EA + + M R VP V++ L+ GLC+ R E +MV +G P
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKP 339
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 82/193 (42%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ TFN + NV + + + E E D N L+ C++G L A +
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ + + P++ T+++L+ GLC+ G V EA + +M G+ PD + +N LI
Sbjct: 294 YKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCK 353
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+L M+ P+ + + ++ G + R + A+ V + F
Sbjct: 354 EGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEV 413
Query: 333 FKQLVVGLCRHRR 345
L+V LC+ +
Sbjct: 414 CDFLIVSLCQEGK 426
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 61/146 (41%)
Query: 227 TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM 286
F L+ G + G+VEE F ++ G VV N L+ V +M
Sbjct: 168 VFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVM 227
Query: 287 VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRT 346
R G +PN ++ + + F E + +E M GF P V++ LV CR R
Sbjct: 228 CRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRL 287
Query: 347 EEVDWALRQMVRQGFVPRMGMWRHIV 372
+E + + M R+ VP + + ++
Sbjct: 288 KEAFYLYKIMYRRRVVPDLVTYTSLI 313
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D C N LI LC G+ A+ V+DE SG EP+ T+ L+ G C+ +++A
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+M+ G PD +V+N L+ + + MV++G + +Y ++ GL
Sbjct: 348 GEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRN 407
Query: 309 KR----------------FIEAL-------------------EVVEGMVSRGFVPSFVSF 333
R F++A+ ++VE M +RGF V+
Sbjct: 408 GRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTI 467
Query: 334 KQLVVGLCRHRRTEEVDWALRQM--VRQG-FVPRMGMWRHIVNCAVSKPRNYE 383
L++G + R DW + M +R+G VP + W V ++ +P++ +
Sbjct: 468 SSLLIGFHKQGRW---DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD 517
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 175 GEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGL-EPNVRTFSTLMH 233
G+ EA P D MN + +G+LS A K+F+ F G+ + T++++M
Sbjct: 582 GQRVEAKPD---SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMS 638
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
+KG + A L++M + D+ +NV+I VLD + ++G Y
Sbjct: 639 SFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYL 698
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
++ Y ++ L A R EA ++ + M S G P VS+ ++ + + +E L
Sbjct: 699 DIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYL 758
Query: 354 RQMVRQGFVP 363
+ M+ G +P
Sbjct: 759 KAMLDAGCLP 768
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 10/197 (5%)
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLA----VEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
V +LV R D+ E +L + D NI I G G+L AA+ +F E
Sbjct: 215 VNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEM 274
Query: 217 PK------SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
+ S P++ T+++L+H LC G ++A ++++ G PD + +LI
Sbjct: 275 KERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGC 334
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+ M GF P+ Y +L G L A++ EA ++ E MV G S
Sbjct: 335 CKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASC 394
Query: 331 VSFKQLVVGLCRHRRTE 347
++ L+ GL R+ R E
Sbjct: 395 WTYNILIDGLFRNGRAE 411
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
T+N +++ V + A V + D N++I+GL + G A V D
Sbjct: 632 TYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRL 691
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
K G ++ ++TL++ L + ++EA + + M+ G+ PDVV +N +I
Sbjct: 692 TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKL 751
Query: 277 XXXXXVLDMMVRKGFYPN 294
L M+ G PN
Sbjct: 752 KEAYKYLKAMLDAGCLPN 769
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 82/175 (46%), Gaps = 1/175 (0%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAV-EVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
N L++ ++ +A +++E + V ++ + N ++ ++G A V D+
Sbjct: 598 NTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
++ ++ T++ ++ GL + G + A L+++ K G D+V++N LI
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+ D M G P+V SY ++ A + EA + ++ M+ G +P+ V+
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 56/116 (48%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
C T+N ++ L D+A V + + +D N LI L + L A
Sbjct: 661 CAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEAT 720
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
++FD +G+ P+V +++T++ + G ++EA+++L+ M G P+ V +L
Sbjct: 721 QLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 60/133 (45%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D A+ M P +N +L+ + R A +++E + V N
Sbjct: 339 RMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYN 398
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
ILI GL + G A +F + K G + TFS + LC +G +E A + +E+ME
Sbjct: 399 ILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETR 458
Query: 255 GVCPDVVVFNVLI 267
G D+V + L+
Sbjct: 459 GFSVDLVTISSLL 471
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 99 NLLDP-IHTLLHQTLKRRSFSDDFFFTL--------IKLYAHVARRIDKAVETLLSMPDF 149
NL D +H LLH+ F DD+ L K + H + D AV+ L
Sbjct: 84 NLSDGLVHKLLHR------FRDDWRSALGILKWAESCKGHKHSSDAYDMAVDIL---GKA 134
Query: 150 QCWPSRRTF------------NFVLNVLVANRLYDVAGEVYEAAP------RLAVEVDAC 191
+ W + F N V ++ R + AGE EA +E +
Sbjct: 135 KKWDRMKEFVERMRGDKLVTLNTVAKIM---RRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
MN+L+ LC++ + A V + KS + PN TF+ +HG C+ VEEA +++M
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEM 250
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
+ G P V+ + +I +L M G PN +Y ++ L K F
Sbjct: 251 KGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF 310
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
EAL V M G P + + L+ L R R EE + R
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+++ GE AV +FD + GLE N + + L+ LC++ VE+A L ++ K
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSH 219
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+ FN+ I + M GF P V SY ++ FI+
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
E++ M + G P+ +++ ++ L + EE +M R G P
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 4/210 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ T+I+ Y I K E L M P+ T+ +++ L A + ++ A V
Sbjct: 262 YTTIIRCYCQQFEFI-KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFD-EFPKSGLEPNVRTFSTLMHGLCEKGM 240
R + D+ N LI L + G L A +VF E P+ G+ N T+++++ C
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 241 VEEAFEWLEKMEKCGVC-PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP-NVGSY 298
++A E L++ME +C PDV + L+ +L MV K + +Y
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 299 QQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
++ L A A + E M+S+ P
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 114/283 (40%), Gaps = 40/283 (14%)
Query: 99 NLLDP-IHTLLHQTLKRRSFSDDFFFTL--------IKLYAHVARRIDKAVETLLSMPDF 149
NL D +H LLH+ F DD+ L K + H + D AV+ L
Sbjct: 84 NLSDGLVHKLLHR------FRDDWRSALGILKWAESCKGHKHSSDAYDMAVDIL---GKA 134
Query: 150 QCWPSRRTF------------NFVLNVLVANRLYDVAGEVYEAAP------RLAVEVDAC 191
+ W + F N V ++ R + AGE EA +E +
Sbjct: 135 KKWDRMKEFVERMRGDKLVTLNTVAKIM---RRFAGAGEWEEAVGIFDRLGEFGLEKNTE 191
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
MN+L+ LC++ + A V + KS + PN TF+ +HG C+ VEEA +++M
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEM 250
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
+ G P V+ + +I +L M G PN +Y ++ L K F
Sbjct: 251 KGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEF 310
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
EAL V M G P + + L+ L R R EE + R
Sbjct: 311 EEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+++ GE AV +FD + GLE N + + L+ LC++ VE+A L ++ K
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL-KSH 219
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+ FN+ I + M GF P V SY ++ FI+
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
E++ M + G P+ +++ ++ L + EE +M R G P
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKP 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 90/210 (42%), Gaps = 4/210 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ T+I+ Y I K E L M P+ T+ +++ L A + ++ A V
Sbjct: 262 YTTIIRCYCQQFEFI-KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFD-EFPKSGLEPNVRTFSTLMHGLCEKGM 240
R + D+ N LI L + G L A +VF E P+ G+ N T+++++ C
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 241 VEEAFEWLEKMEKCGVC-PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP-NVGSY 298
++A E L++ME +C PDV + L+ +L MV K + +Y
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 299 QQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
++ L A A + E M+S+ P
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 80/187 (42%), Gaps = 1/187 (0%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
FN +L R A ++E D MNIL+ G + G+++A + E
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
K G +PN T+ + G C+K EA E M++ V + LI
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
+ D + ++G P+ G+Y ++ L+ A++V++ M +G P V+F +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 338 VGLCRHR 344
+G+ + +
Sbjct: 358 IGMMKSK 364
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 107/263 (40%), Gaps = 14/263 (5%)
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA 167
+ + + R+ F D F L++ A R K ++ + P +T N +L L
Sbjct: 165 MEKEIFRKKFGVDEFNILLR--AFCTEREMKEARSIFEKLHSRFNPDVKTMNILL--LGF 220
Query: 168 NRLYDVAGE--VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
DV Y + + ++ I I G C++ A+++F++ + + V
Sbjct: 221 KEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITV 280
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
+ +TL+HG +A + +++ K G+ PD +N L+ V+
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKR--FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
M KG P+ ++ + G++ +K F E + M R VP + L+ C +
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHN 400
Query: 344 RRTEEVDWAL---RQMVRQGFVP 363
EV+ L + M+ +G+ P
Sbjct: 401 ---GEVNLGLDLWKYMLEKGYCP 420
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 11/199 (5%)
Query: 156 RTFNFVLN----VLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
++FN VLN V+ + R A V+ + V+ D + +I + G L+ +K
Sbjct: 267 KSFNIVLNGWCNVIGSPR---EAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVCPDVVVFNVLIXXX 270
+FD K +EP+ + ++ ++H L + V EA ++ M E+ G+ P+VV +N LI
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
V D M+ KG +P + +Y + L + E E++ M G P+
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGE---EVFELLAKMRKMGCEPTV 440
Query: 331 VSFKQLVVGLCRHRRTEEV 349
++ L+ LCR R + V
Sbjct: 441 ETYIMLIRKLCRWRDFDNV 459
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 4/178 (2%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEA-APRLAVEVDACCMNILIKGLCQQGELSAAVK 211
P R+ +N V++ L A + + +E + N LIK LC+ + A +
Sbjct: 335 PDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQ 394
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
VFDE + GL P +RT+ M L EE FE L KM K G P V + +LI
Sbjct: 395 VFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTVETYIMLIRKLC 451
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
+ D M K P++ SY +++GL + EA + M +G P+
Sbjct: 452 RWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPN 509
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 104/251 (41%), Gaps = 45/251 (17%)
Query: 154 SRRTFNFVLNVLVANRLYDVA----GEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
S R ++ ++++L R +D A E+ + +P L V++ + I+I+ C ++ A
Sbjct: 160 SVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSL---VNSQTLLIMIRKYCAVHDVGKA 216
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA------------FE----------- 246
+ F + + LE + F +L+ LC V +A F+
Sbjct: 217 INTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGW 276
Query: 247 -------------WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
W+E M GV DVV ++ +I + D M ++ P
Sbjct: 277 CNVIGSPREAERVWME-MGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVS-RGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
+ Y V++ L A EA +++ M +G P+ V++ L+ LC+ R+TEE
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 353 LRQMVRQGFVP 363
+M+ +G P
Sbjct: 396 FDEMLEKGLFP 406
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 120/323 (37%), Gaps = 10/323 (3%)
Query: 63 NHPSSAVTLLHLYTARKDFN----PTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFS 118
N+ S V+ + KD N P + +I L AN +D TLLH ++
Sbjct: 415 NYESDGVS--EIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIP 472
Query: 119 DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
+ I R +++++ L M D PS+ T N + L + A ++
Sbjct: 473 GPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLL 532
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
+ E L+K LC+ G A K D+ G ++ + + GL +
Sbjct: 533 KKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKN 592
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSY 298
V+ E + G CPDV+ ++VLI + + MV KG P V +Y
Sbjct: 593 EGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATY 652
Query: 299 QQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVR 358
++ G L + M P +++ L+ GLC R E + +M
Sbjct: 653 NSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Query: 359 QGFVPR----MGMWRHIVNCAVS 377
+ P M + + + C S
Sbjct: 713 KDCYPNRITFMALIQGLCKCGWS 735
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/281 (18%), Positives = 106/281 (37%), Gaps = 58/281 (20%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
++DKA E + + + + +T+ +++ V D A +++E R+ + D +
Sbjct: 263 QVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYD 322
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPN------------------------------ 224
+LI GLC+ +L A+ ++ E +SG+ P+
Sbjct: 323 VLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK 382
Query: 225 ---VRTFSTLMHGLCEKGMVEEAFEWLEKM----EKCGVCPDVVVFNVLIXXXXXXXXXX 277
+ + +L G +V EA+ +++ + E GV V +
Sbjct: 383 KSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH----------- 431
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
K P+ S V+ L+ A + A+ ++ +V G +P + + ++
Sbjct: 432 ----------NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNII 481
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
G+C+ R+EE L +M G P I C +
Sbjct: 482 EGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAER 522
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 70/154 (45%), Gaps = 2/154 (1%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
IL+ C+ G++ A ++ + + + N +T+ L+HG ++ +++AF+ EKM +
Sbjct: 253 ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G+ D+ +++VLI + + R G P+ G ++L +
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRI 372
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
EV+ G + + V + +K L G R+ E
Sbjct: 373 TEVIIGDIDKKSV--MLLYKSLFEGFIRNDLVHE 404
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 131/323 (40%), Gaps = 22/323 (6%)
Query: 57 TLCNSLNHPS--SAVTLLHLYTARKDFNPTEP---------------FCTSLITKLAHA- 98
TL + + PS S TLL T +K + F ++I + +
Sbjct: 70 TLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESG 129
Query: 99 NLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVAR--RIDKAVETLLSMPDFQCWPSRR 156
N+ D + LL + + + TLIK Y + R + ++ +L + P+ R
Sbjct: 130 NMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIR 189
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGE-LSAAVKVFDE 215
TFN ++ + + A EV + V D N + Q+GE + A +V ++
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 216 FP-KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
K +PN RT ++ G C +G V + ++ +M++ V ++VVFN LI
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
VL +M +V +Y V+ A +A +V + MV G P ++
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 335 QLVVGLCRHRRTEEVDWALRQMV 357
L G R + ++ + L ++
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLI 392
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
FN ++N V D EV V+ D + ++ G + A +VF E
Sbjct: 298 FNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 357
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
K+G++P+ +S L G ++A E LE + P+VV+F +I
Sbjct: 358 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMD 416
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
V + M + G PN+ +++ +++G L+ K+ +A EV++ M G P +F
Sbjct: 417 DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F +LI + V R D E L M + T++ V+N + + A +V++
Sbjct: 298 FNSLINGFVEVMDR-DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ V+ DA +IL KG + E A ++ + PNV F+T++ G C G +
Sbjct: 357 VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSM 415
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSY 298
++A KM K GV P++ F L+ VL MM G P ++
Sbjct: 416 DDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 472
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 84/197 (42%), Gaps = 5/197 (2%)
Query: 156 RTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDE 215
R+ ++NVL+ A V++ L+ + Q + + + E
Sbjct: 46 RSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSE 105
Query: 216 FPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
+SG + + F+ +++ E G +E+A + L KM++ G+ P +N LI
Sbjct: 106 VEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGK 165
Query: 276 XXXXXXVLDMMVRKG---FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
+LD+M+ +G PN+ ++ ++ K+ EA EVV+ M G P V+
Sbjct: 166 PERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVT 225
Query: 333 FKQLVVGLCRHRRTEEV 349
+ + C ++ E V
Sbjct: 226 YN--TIATCYVQKGETV 240
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%)
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
N++++ + + + A +FDE + L P+ T+STL+ ++GM + A WL+KM
Sbjct: 157 AYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKM 216
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
E+ V D+V+++ LI + + R G P++ +Y ++ AK F
Sbjct: 217 EQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLF 276
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLV 337
EA +++ M G +P+ VS+ L+
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLL 302
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 34/302 (11%)
Query: 112 LKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANR 169
LKR + D + ++I +Y A+ +A + M + P+ +++ +L+V V N
Sbjct: 251 LKRSGITPDLVAYNSMINVYGK-AKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENH 309
Query: 170 LYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFS 229
+ A V+ + +D NI+I Q + A ++F K +EPNV +++
Sbjct: 310 KFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYN 369
Query: 230 TLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRK 289
T++ E + EA M++ + +VV +N +I ++ M +
Sbjct: 370 TILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR 429
Query: 290 GFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVG---------- 339
G PN +Y ++ A + A + + + S G V ++ ++V
Sbjct: 430 GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHA 489
Query: 340 ---------------------LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSK 378
L + RTEE W RQ G V + ++ ++N
Sbjct: 490 KRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRN 549
Query: 379 PR 380
R
Sbjct: 550 QR 551
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 134/345 (38%), Gaps = 17/345 (4%)
Query: 5 AKMISRARTLVPPLTPHHKPRLWFCTQPNTDRDTAILARFQQKDWLTPKQATTLCNSLNH 64
A ++ R T PP P F + D+A L + Q P++ + L N
Sbjct: 13 ANLLVRKTTPSPPAPPRD-----FRNRTAVGGDSAKLPQNTQ----APREPS-LRNPFKS 62
Query: 65 P--SSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFF 122
P S A +L + A F S++ +++ L LK +
Sbjct: 63 PNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGR 122
Query: 123 FTLIKLYAHVARRIDKAVET----LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
T + L +H R D ++ L M + P + T + + L D A ++
Sbjct: 123 STFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLM 182
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKS-GLEPNVRTFSTLMHGLCE 237
+ D N L+K LC+ +L + DE ++P++ +F+ L+ +C
Sbjct: 183 KELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN 242
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
+ EA + K+ G PD ++N ++ V M +G P+ +
Sbjct: 243 SKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
Y +++GL A R EA ++ MV G+ P ++ L+ G+CR
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 5/182 (2%)
Query: 195 ILIKGLCQ--QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
IL+ C+ +S +V + +GLEP+ T + LCE G V+EA + ++++
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF--YPNVGSYQQVLYGLLDAKR 310
+ PD +N L+ +D M R F P++ S+ ++ + ++K
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM-RDDFDVKPDLVSFTILIDNVCNSKN 245
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
EA+ +V + + GF P + ++ G C + E ++M +G P +
Sbjct: 246 LREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNT 305
Query: 371 IV 372
++
Sbjct: 306 LI 307
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 107/289 (37%), Gaps = 2/289 (0%)
Query: 88 CTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMP 147
C+ L T L + D I LL + F D + ++R D A E +M
Sbjct: 241 CSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMD 300
Query: 148 DFQCWPSRRTFNFVLNVL-VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+P T ++ L A R E++E V+ L+K C +G
Sbjct: 301 KINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLK 360
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
A+ + E K G+ N ++TLM + +EE +M G+ P +N+L
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNIL 420
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE-ALEVVEGMVSRG 325
+ +L M G PNV SY ++ K+ + A + M G
Sbjct: 421 MDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVG 480
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
PS S+ L+ E+ + +M ++G P + + +++
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 98/243 (40%), Gaps = 2/243 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ TL+ Y + + I++ M D PS T+N +++ D+ +
Sbjct: 382 YNTLMDAY-NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM 440
Query: 182 PRLAVEVDACCMNILIKGLCQQGELS-AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
L +E + LI + ++S A F K GL+P+ +++ L+H G
Sbjct: 441 EDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGW 500
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
E+A+ E+M K G+ P V + ++ + +M+R+ +Y
Sbjct: 501 HEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
+L G +IEA +VV G PS +++ L+ R + ++ L++M
Sbjct: 561 LLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALN 620
Query: 361 FVP 363
P
Sbjct: 621 LKP 623
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/284 (19%), Positives = 116/284 (40%), Gaps = 3/284 (1%)
Query: 56 TTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDP--IHTLLHQTLK 113
TL ++ N + + L+T +D T I A+A + P + TLL +
Sbjct: 383 NTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMED 442
Query: 114 RRSFSDDFFFT-LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYD 172
+ +T LI Y + D A + L M PS ++ +++ + ++
Sbjct: 443 LGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHE 502
Query: 173 VAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLM 232
A +E + ++ ++ + G+ ++++ + ++ T++TL+
Sbjct: 503 KAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL 562
Query: 233 HGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
G ++G+ EA + + + K G+ P V+ +N+L+ +L M
Sbjct: 563 DGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLK 622
Query: 293 PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
P+ +Y ++Y + + F A + MV G VP S+++L
Sbjct: 623 PDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 104/248 (41%), Gaps = 1/248 (0%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
LI+ Y ++ D A + LL M + C P T+ +++ LV + D A +
Sbjct: 386 LIQAYCK-SKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR 444
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
V DA N+L+ GLC+ G A +F E + P+ ++TL+ G G +EA
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
+ + GV DVV N +I ++ M + P+ +Y ++ G
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
+ + A+++ M P+ V++ L+ G C + + ++M + VP
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 365 MGMWRHIV 372
+ + ++
Sbjct: 625 VVTYTTLI 632
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 107/273 (39%)
Query: 76 TARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARR 135
++K P LI + D LL Q +R D + ++ V+
Sbjct: 371 ASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGH 430
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+D AV + + D P +N +++ L + A ++ + DA
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G + G+ A KVF + G++ +V + ++ G C GM++EA + +M +
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ PD ++ +I + M + PNV +Y ++ G F A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
E + M R VP+ V++ L+ L + T E
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 152/358 (42%), Gaps = 40/358 (11%)
Query: 48 DWLTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLIT---KLAHANLLDPI 104
DWL+ ++ ++ SS + LL Y + FN E +L KL H + +
Sbjct: 85 DWLSSEKKDEFFSNGFACSSFLKLLARY---RIFNEIEDVLGNLRNENVKLTH----EAL 137
Query: 105 HTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD-FQCWPSRRTFNFVLN 163
+LH + S S +++Y +V VE S+PD C N +L+
Sbjct: 138 SHVLHAYAESGSLS-----KAVEIYDYV-------VELYDSVPDVIAC-------NSLLS 178
Query: 164 VLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEP 223
+LV +R A +VY+ VD IL+KG+C +G++ K+ + G P
Sbjct: 179 LLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP 238
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL 283
N+ ++T++ G C+ G +E A+ ++++ G P + F +I +L
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 284 DMMVRKGFYPNVGSYQQVLYGLLDAK----RFIEALEVVEGMVSRGFVPSFVSFKQLVVG 339
+ +G +V L ++DAK ++ E + +++ P ++ L+
Sbjct: 299 SEVKERGLRVSV----WFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE-GC 396
LC+ + E L + ++G +P + ++ A K + Y+ L ++ E GC
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ-AYCKSKEYDIASKLLLQMAERGC 411
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 1/198 (0%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGE 205
M D P + +++ + + +D A +V+ + V+VD N +IKG C+ G
Sbjct: 476 MLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGM 535
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
L A+ + + L P+ T+ST++ G ++ + A + MEK P+VV +
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE-ALEVVEGMVSR 324
LI M + PNV +Y ++ L +E A+ E M++
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 325 GFVPSFVSFKQLVVGLCR 342
VP+ V+F L+ G +
Sbjct: 656 KCVPNEVTFNCLLQGFVK 673
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/213 (19%), Positives = 91/213 (42%), Gaps = 35/213 (16%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGL---------------------------------- 221
+I G C++G+ A+ ++ E + GL
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIAND 340
Query: 222 -EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
+P+V T++ L++ LC++G E A +L++ K G+ P+ + + LI
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIAS 400
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
+L M +G P++ +Y +++GL+ + +A+ + ++ RG P + L+ GL
Sbjct: 401 KLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 341 CRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
C+ R +M+ + +P ++ +++
Sbjct: 461 CKTGRFLPAKLLFSEMLDRNILPDAYVYATLID 493
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 85/221 (38%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P+ ++ ++ ++ YD+A ++ + D ILI GL G + AV +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
+ G+ P+ ++ LM GLC+ G A +M + PD V+ LI
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVS 332
V + V KG +V + ++ G + EAL + M VP +
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 333 FKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ ++ G + + R M + P + + ++N
Sbjct: 558 YSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLIN 598
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 85/221 (38%), Gaps = 15/221 (6%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
+D+A+ + M + P + T++ +++ V + A +++ + + +
Sbjct: 536 LDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTS 595
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC-EKGMVEEAFEWLEKMEKC 254
LI G C QG+ A + F E L PNV T++TL+ L E +E+A + E M
Sbjct: 596 LINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTN 655
Query: 255 GVCPDVVVFNVLIXXXXXXXX--------------XXXXXXVLDMMVRKGFYPNVGSYQQ 300
P+ V FN L+ M G+ + +Y
Sbjct: 656 KCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNS 715
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
L L A + MV +GF P VSF ++ G C
Sbjct: 716 ALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFC 756
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 110/285 (38%), Gaps = 47/285 (16%)
Query: 92 ITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSM---PD 148
I KL A + + +++Q L R ++ + I Y A ++ +AV M +
Sbjct: 179 IRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKN 238
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL--------AVEVDACCMNILIKGL 200
+C P+ RT++ + L+ VY R +E D +N L+KG
Sbjct: 239 LECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGY 298
Query: 201 CQQGELSAAVKVFDEFP-KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
++ A+++F + EPN T+ L+HGLC +G A E L +M+ G
Sbjct: 299 VLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKG---- 354
Query: 260 VVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
F PN SY ++ + +A++ +
Sbjct: 355 -------------------------------FVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 320 GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
M+ G V F+S++ LV CR + +E L + + V R
Sbjct: 384 EMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 96/241 (39%), Gaps = 12/241 (4%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
+++ + L A ++Y ++ + + N +I + G+L AV +F
Sbjct: 174 SYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM 233
Query: 217 PKS-GLE--PNVRTFSTLMHGLCEKG--------MVEEAFEWLEKMEKCGVCPDVVVFNV 265
S LE P +RT+ L L +G +E +M G+ PDV N
Sbjct: 234 VTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNC 293
Query: 266 LIXXXXXXXXXXXXXXVLDMM-VRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
L+ + M V PN +Y +++GL R I A E++ M +
Sbjct: 294 LVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGK 353
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYES 384
GFVP+ S+ LV ++ L +M+ G V +R +V+ + K + E+
Sbjct: 354 GFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEA 413
Query: 385 T 385
T
Sbjct: 414 T 414
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D +N++IK + E+ A++VF E G EPN T+S L+ G+CEKG V + +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M+ G+ P+ + VLI V+ M+ P++ +Y VL L
Sbjct: 282 KEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRG 341
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
R EALE+VE R V +++ L+
Sbjct: 342 GRGSEALEMVEEWKKRDPVMGERNYRTLM 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 128 LYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRL----YDVAGEVYEAAPR 183
+Y H R + K +++ +PD FVLN+++ D A V++
Sbjct: 202 VYLHAVRSLTKQMKSNGVIPD----------TFVLNMIIKAYAKCLEVDEAIRVFKEMAL 251
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
E +A + L+KG+C++G + + + E G+ PN + L+ L + ++E
Sbjct: 252 YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDE 311
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLI 267
A E + M + PD++ +N ++
Sbjct: 312 AVEVVYDMLANSLSPDMLTYNTVL 335
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
++F + + GL PN ++ GLC+ G+V+EA + M G P+VV++ ++
Sbjct: 120 EIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+ M G PN SY ++ GL + +A+ M+ G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+F +LV LCR + E+ A+ + ++GF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
++ GLC+ G + A+K+F G P V ++ ++ C+ +E+A KM+ G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+ + VL+ M+ G PNV ++ +++ L K +A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 316 EVVEGMVSRGFVPSFVSFKQLV 337
++ + +GF + + K+ +
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFM 278
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
++F + + GL PN ++ GLC+ G+V+EA + M G P+VV++ ++
Sbjct: 120 EIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAF 176
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+ M G PN SY ++ GL + +A+ M+ G P+
Sbjct: 177 CKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNV 236
Query: 331 VSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
+F +LV LCR + E+ A+ + ++GF
Sbjct: 237 PTFVELVDALCRVKGVEQAQSAIDTLNQKGFA 268
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 63/142 (44%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
++ GLC+ G + A+K+F G P V ++ ++ C+ +E+A KM+ G
Sbjct: 137 MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNG 196
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ P+ + VL+ M+ G PNV ++ +++ L K +A
Sbjct: 197 IAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQ 256
Query: 316 EVVEGMVSRGFVPSFVSFKQLV 337
++ + +GF + + K+ +
Sbjct: 257 SAIDTLNQKGFAVNVKAVKEFM 278
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 6/190 (3%)
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
+ +DA LI G ++G+L A++++D K N+ ++++++GL ++GM A
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA 520
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVG--SYQQVL 302
+ ME D+V +N L+ +L M ++ +V ++ ++
Sbjct: 521 EAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMI 576
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
L + +A EV++ MV RG VP +++ L+ +HR E+V ++ QG
Sbjct: 577 NHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVT 636
Query: 363 PRMGMWRHIV 372
P ++ IV
Sbjct: 637 PHEHIYLSIV 646
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 116/322 (36%), Gaps = 39/322 (12%)
Query: 54 QATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLK 113
++ T+ S N ++ ++HL + F+ +L++ L P+H L
Sbjct: 83 RSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMS--VEGEKLSPLHVL------ 134
Query: 114 RRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDV 173
LI+ Y C S F+ ++ N
Sbjct: 135 ---------SGLIRSYQ-------------------ACGSSPDVFDSLVRACTQNGDAQG 166
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A EV E V +N + L E+ KV+ E G NV TF+ +++
Sbjct: 167 AYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIY 226
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL---DMMVRKG 290
C++ + EA +M KCGV P+VV FN++I +L MM
Sbjct: 227 SFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNF 286
Query: 291 FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
PN +Y V+ G A R A + MV G + ++ LV R ++E
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 351 WALRQMVRQGFVPRMGMWRHIV 372
+M +G V ++ IV
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIV 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%)
Query: 188 VDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEW 247
V+ N ++ L +G++ A+ V + ++ + T + ++ GLC G V+EA E+
Sbjct: 359 VNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
Query: 248 LEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD 307
++ + + D+V N L+ +L M+ +G + S+ ++ G L
Sbjct: 419 QRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
+ ALE+ +GM+ + V + +V GL +
Sbjct: 479 EGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSK 513
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 101/250 (40%), Gaps = 7/250 (2%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
I+ A+ L M R T V+ L N A E + D C N
Sbjct: 377 IEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNT 436
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
L+ + +L+ A ++ GL + +F TL+ G ++G +E A E + M K
Sbjct: 437 LMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMN 496
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
++V++N ++ V++ M K ++ +Y +L L EA
Sbjct: 497 KTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEAD 552
Query: 316 EVVEGMVSRGFVP--SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+++ M + S V+F ++ LC+ E+ L+ MV +G VP + ++
Sbjct: 553 DILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLIT 612
Query: 374 CAVSKPRNYE 383
+ SK R+ E
Sbjct: 613 -SFSKHRSQE 621
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 92/230 (40%), Gaps = 3/230 (1%)
Query: 136 IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI 195
ID+ + M + TFN V+ A V+ + V + N+
Sbjct: 199 IDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNM 258
Query: 196 LIKGLCQQGELSAAVKVFDEFPK-SG--LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+I G C+ G++ A+++ + SG + PN T++++++G C+ G ++ A M
Sbjct: 259 MIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMV 318
Query: 253 KCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
K GV + + L+ + D M KG N Y ++Y L
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
A+ V+ M S+ + +V GLCR+ +E RQ+ + V
Sbjct: 379 GAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLV 428
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 82/176 (46%), Gaps = 6/176 (3%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N LI C+ E+ A K+ D+ + P+V T++T++ GL G ++A E L
Sbjct: 245 DVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVL 304
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
++M++ G PDV +N I ++D MV+KG PN +Y L A
Sbjct: 305 KEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLA 364
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR---QMVRQGF 361
+ E+ M+ +P+ S L+ RH E+VD A+R MV +GF
Sbjct: 365 NDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRH---EKVDMAMRLWEDMVVKGF 417
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D C N L++ LCQ+ ++ A V+ K +P+++TF+ L+ G EEA +
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGW---KSSEEAEAFF 234
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
E+M+ G+ PDVV +N LI ++D M + P+V +Y V+ GL
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ +A EV++ M G P ++ + C RR + D + +MV++G P
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSP 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 98/239 (41%), Gaps = 9/239 (3%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +LI +Y R I+KA + + M + + P T+ V+ L D A EV +
Sbjct: 249 YNSLIDVYCK-DREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEM 307
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
D N I+ C L A K+ DE K GL PN T++ L +
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
++E +M P+ LI + + MV KGF GSY V
Sbjct: 368 GRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF----GSYSLV 423
Query: 302 LYGLLDAKRFIEALEVVEG----MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
LLD + +E E MV +G PS VSFK++ + + + +EV+ +++M
Sbjct: 424 SDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 482
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 38/305 (12%)
Query: 51 TPKQATTLCNSL---NHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTL 107
T + T L N L P A T+ A P+ T+L+ + I ++
Sbjct: 44 TVRSRTKLMNVLIERGRPHEAQTVFKTL-AETGHRPSLISYTTLLAAMTVQKQYGSISSI 102
Query: 108 LHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA 167
+ + + + D FF + + ++ AV+ LL M + P+ T+N ++
Sbjct: 103 VSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLI----- 157
Query: 168 NRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRT 227
+ Y +AG+ P + E L+ + ++G + PN+RT
Sbjct: 158 -KGYGIAGK-----PERSSE--------LLDLMLEEGNVDVG-------------PNIRT 190
Query: 228 FSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX--XXXXXXXXXXXXXVLDM 285
F+ L+ C+K VEEA+E ++KME+CGV PD V +N + V M
Sbjct: 191 FNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKM 250
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
++++ PN + V+ G R + L V M + V F L+ G
Sbjct: 251 VMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMD 310
Query: 346 TEEVD 350
+ +D
Sbjct: 311 RDGID 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 16/214 (7%)
Query: 122 FFTLIKLYAHVARR--IDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE 179
F +LI + V R ID+ TLL M +FN + LV N+ V +V
Sbjct: 298 FNSLINGFVEVMDRDGIDEVTLTLLLM----------SFNEEVE-LVGNQKMKV--QVLT 344
Query: 180 AAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
V+ D + ++ G + A +VF E K+G++P+ +S L G
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 404
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
++A E LE + P+VV+F +I V + M + G PN+ +++
Sbjct: 405 EPKKAEELLETL-IVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 463
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
+++G L+ K+ +A EV++ M G P +F
Sbjct: 464 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I G C G + A++VF++ K G+ PN++TF TLM G E +A E L+ M CG
Sbjct: 430 VISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCG 489
Query: 256 VCPDVVVFNVL 266
V P+ F +L
Sbjct: 490 VKPENSTFLLL 500
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 139/371 (37%), Gaps = 22/371 (5%)
Query: 5 AKMISRARTLVPPLTPHH-KPRLWFCT------------QPNTDRDTAILARFQQKDWLT 51
A +I RA ++ + HH P+ T + NT+ + R + +D
Sbjct: 225 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK-RDRCK 283
Query: 52 PKQATT--LCNSLNHPSSAVTLLHLYTARKDFNPTEPFCT--SLITKLAHANLLDPIHTL 107
P T + N S + LY + CT +L+ A L + +
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 108 LHQTLKRRSFSDDFFF--TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
Q L+ D + L++ Y+ A E M C P R ++N +++
Sbjct: 344 FEQ-LQEDGLEPDVYVYNALMESYSRAGYPYG-AAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
L+ A V+E RL + +L+ + +++ + E ++G+EP+
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
+++++ G + + L +ME D+ +N+LI +
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 521
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
+ K F P+V ++ + K +++ LEV E M+ G P + K L+ +
Sbjct: 522 LKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQ 581
Query: 346 TEEVDWALRQM 356
E+V LR M
Sbjct: 582 VEQVTSVLRTM 592
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 131/318 (41%), Gaps = 7/318 (2%)
Query: 62 LNHPSSAVTLLHLYTARKD-FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSF-SD 119
LN ++ L+ + RK F P LI +L Q L+ R ++
Sbjct: 153 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 212
Query: 120 DFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSR---RTFNFVLNVLVANRL-YDVAG 175
D + LIK Y +A I++A L+ M + P +N + L+ + + A
Sbjct: 213 DTYALLIKAYC-MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 271
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
+V++ R + N++I + + + K++ E +PN+ T++ L++
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 331
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
+G+ E+A E E++++ G+ PDV V+N L+ + +M G P+
Sbjct: 332 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 391
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
SY ++ A +A V E M G P+ S L+ + R + + +++
Sbjct: 392 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 451
Query: 356 MVRQGFVPRMGMWRHIVN 373
M G P + ++N
Sbjct: 452 MSENGVEPDTFVLNSMLN 469
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 110/275 (40%), Gaps = 7/275 (2%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
+I LY ++ + + M QC P+ T+ ++N L + A E++E
Sbjct: 292 MINLYGKASKSY-MSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
+E D N L++ + G A ++F G EP+ +++ ++ G+ +A
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV--L 302
E+M++ G+ P + +L+ ++ M G P+ + L
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
YG L +F + +++ M + ++ L+ + E ++ ++ + F
Sbjct: 471 YGRLG--QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 528
Query: 363 PRMGMWRHIVNCAVSKPRNYESTCVSLDEILE-GC 396
P + W + A S+ + Y +E+++ GC
Sbjct: 529 PDVVTWTSRIG-AYSRKKLYVKCLEVFEEMIDSGC 562
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 4/193 (2%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
C P+ ++N ++ A L A +V+E V D N +I GLC E+ A
Sbjct: 277 CSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAK 336
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
++F + G+E T+ L++G C+ G V+ +M++ G D + L+
Sbjct: 337 ELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
Query: 271 XXXXXXXXXXXVLDMM---VRKG-FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
D++ VR+ FYP+ Y+ ++ L + + AL + MV +GF
Sbjct: 397 CDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGF 456
Query: 327 VPSFVSFKQLVVG 339
PS +++ + G
Sbjct: 457 KPSQETYRAFIDG 469
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 119/274 (43%), Gaps = 11/274 (4%)
Query: 105 HTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNV 164
+ L+ + +RR S+ + K+Y V D +V+ M + P+ TFN ++
Sbjct: 201 NALITEVSRRRGASNGY-----KMYREVFGLDDVSVDEAKKMIG-KIKPNATTFNSMMVS 254
Query: 165 LVANRLYDVAGEVY-EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEP 223
++ ++ E + + N+L++ C +G +S A KV++E G+
Sbjct: 255 FYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVY 314
Query: 224 NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVL 283
++ ++T++ GLC V +A E M G+ + + L+ V
Sbjct: 315 DIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVY 374
Query: 284 DMMVRKGFYPNVGSYQQVLYGLLD---AKRFIEALEVVEGMVSRG-FVPSFVSFKQLVVG 339
M RKGF + + + ++ GL D +R +EA ++V+ V F PS ++ LV
Sbjct: 375 REMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKR 434
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
LC + + +MV +GF P +R ++
Sbjct: 435 LCEDGKMDRALNIQAEMVGKGFKPSQETYRAFID 468
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 15/187 (8%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +I G C G L A + K G+ PN+ T++ LM E G +E A + E
Sbjct: 798 NTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN- 856
Query: 254 CGVC-PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
C PD V+++ L+ ++ M + G PN SY+++L L ++ +
Sbjct: 857 ---CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTM 913
Query: 313 EALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
EA++VV+ M + P ++ L+ LC ++ E MV+ G R ++
Sbjct: 914 EAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG--------RSLL 965
Query: 373 NCAVSKP 379
NC +KP
Sbjct: 966 NC--TKP 970
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 4/165 (2%)
Query: 200 LCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
L G S A++V + KS + PN+ +T++ G C G ++EA+ LE M+K G+ P+
Sbjct: 770 LGNYGSKSFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPN 828
Query: 260 VVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE 319
+V + +L+ +D+ P+ Y +L GL D KR ++AL ++
Sbjct: 829 LVTYTILM---KSHIEAGDIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALML 885
Query: 320 GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPR 364
M G P+ S+++L+ LC R T E ++ M PR
Sbjct: 886 EMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPR 930
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 88/204 (43%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R A+ + M + C P ++N V+ L + + + L D
Sbjct: 491 RNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTY 550
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
I++ LC++ + AA + D + GL P V +S+++ L ++G V EA E KM +
Sbjct: 551 LIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLE 610
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ PD + + ++I +++ +V+ P+ +Y ++ G + +
Sbjct: 611 SGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEK 670
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLV 337
+ ++ M+ G P+ V + L+
Sbjct: 671 GCQYLDKMLEDGLSPNVVLYTALI 694
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 132/320 (41%), Gaps = 9/320 (2%)
Query: 76 TARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF-FFTLIKLYAHVAR 134
T +D + T+LI +D LL + L D +F L+K+
Sbjct: 369 TGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK-CH 427
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
+ A+ L S+ D C + + + N+ V ++ + GE+ LA A +
Sbjct: 428 ELKYAMVILQSILDNGCGINPPVIDDLGNIEV--KVESLLGEIARKDANLA----AVGLA 481
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
++ LC Q AA+ ++ G P ++++++ L ++ ++E+ + +++
Sbjct: 482 VVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQEL 541
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
PDV + +++ ++D M G P V Y ++ L R +EA
Sbjct: 542 DFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEA 601
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
E M+ G P +++ ++ R+ R +E + + ++V+ P + +++
Sbjct: 602 EETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISG 661
Query: 375 AVSKPRNYESTCVSLDEILE 394
V K E C LD++LE
Sbjct: 662 FV-KMGMMEKGCQYLDKMLE 680
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 95/245 (38%), Gaps = 9/245 (3%)
Query: 116 SFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAG 175
S D F L+KL RR D+A L + PSR + + V++ L + A
Sbjct: 132 SVLDSMVFCLVKL-----RRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAF 186
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEP-NVRTFSTLMHG 234
+E + C L KGLC G L+ A+ + D P V + +L +
Sbjct: 187 HCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYC 246
Query: 235 LCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPN 294
C++G EA + ME G D V++ L+ + MV + F +
Sbjct: 247 FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELD 306
Query: 295 VGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
+ +++G + + + M+ +G + ++ ++ C+ VD+ALR
Sbjct: 307 PCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKE---GNVDYALR 363
Query: 355 QMVRQ 359
V
Sbjct: 364 LFVNN 368
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/371 (19%), Positives = 139/371 (37%), Gaps = 22/371 (5%)
Query: 5 AKMISRARTLVPPLTPHH-KPRLWFCT------------QPNTDRDTAILARFQQKDWLT 51
A +I RA ++ + HH P+ T + NT+ + R + +D
Sbjct: 203 AGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMK-RDRCK 261
Query: 52 PKQATT--LCNSLNHPSSAVTLLHLYTARKDFNPTEPFCT--SLITKLAHANLLDPIHTL 107
P T + N S + LY + CT +L+ A L + +
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 108 LHQTLKRRSFSDDFFF--TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
Q L+ D + L++ Y+ A E M C P R ++N +++
Sbjct: 322 FEQ-LQEDGLEPDVYVYNALMESYSRAGYPYG-AAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
L+ A V+E RL + +L+ + +++ + E ++G+EP+
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDM 285
+++++ G + + L +ME D+ +N+LI +
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVE 499
Query: 286 MVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
+ K F P+V ++ + K +++ LEV E M+ G P + K L+ +
Sbjct: 500 LKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQ 559
Query: 346 TEEVDWALRQM 356
E+V LR M
Sbjct: 560 VEQVTSVLRTM 570
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 131/318 (41%), Gaps = 7/318 (2%)
Query: 62 LNHPSSAVTLLHLYTARKD-FNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSF-SD 119
LN ++ L+ + RK F P LI +L Q L+ R ++
Sbjct: 131 LNKKWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTE 190
Query: 120 DFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSR---RTFNFVLNVLVANRL-YDVAG 175
D + LIK Y +A I++A L+ M + P +N + L+ + + A
Sbjct: 191 DTYALLIKAYC-MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 249
Query: 176 EVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGL 235
+V++ R + N++I + + + K++ E +PN+ T++ L++
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAF 309
Query: 236 CEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
+G+ E+A E E++++ G+ PDV V+N L+ + +M G P+
Sbjct: 310 AREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDR 369
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
SY ++ A +A V E M G P+ S L+ + R + + +++
Sbjct: 370 ASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKE 429
Query: 356 MVRQGFVPRMGMWRHIVN 373
M G P + ++N
Sbjct: 430 MSENGVEPDTFVLNSMLN 447
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 110/275 (40%), Gaps = 7/275 (2%)
Query: 125 LIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRL 184
+I LY ++ + + M QC P+ T+ ++N L + A E++E
Sbjct: 270 MINLYGKASKSY-MSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
+E D N L++ + G A ++F G EP+ +++ ++ G+ +A
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV--L 302
E+M++ G+ P + +L+ ++ M G P+ + L
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
YG L +F + +++ M + ++ L+ + E ++ ++ + F
Sbjct: 449 YGRLG--QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFR 506
Query: 363 PRMGMWRHIVNCAVSKPRNYESTCVSLDEILE-GC 396
P + W + A S+ + Y +E+++ GC
Sbjct: 507 PDVVTWTSRIG-AYSRKKLYVKCLEVFEEMIDSGC 540
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 4/229 (1%)
Query: 121 FFFTLIKLYAHVARRIDKA--VETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
+ TL+K Y R D A +E + D P T+ V++ V L D A +V
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK-SGLEPNVRTFSTLMHGLCE 237
R+ V + N+L+KG C+Q ++ A + E + +G+EP+V +++ ++ G
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL 535
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLD-MMVRKGFYPNVG 296
A + +M G+ P + + L+ V D MM ++
Sbjct: 536 IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLI 595
Query: 297 SYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR 345
++ ++ G +A VV M GF P+ ++ L G+ + R+
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 3/210 (1%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D ++ G + A +V E + G+ N T++ L+ G C++ ++ A + L
Sbjct: 451 DEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLL 510
Query: 249 EKM-EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD 307
+M E G+ PDVV +N++I + M +G P SY ++
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAM 570
Query: 308 AKRFIEALEVVEGMVSRGFVP-SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMG 366
+ + A V + M++ V +++ LV G CR E+ + +M GF P +
Sbjct: 571 SGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVA 630
Query: 367 MWRHIVNCAVSKPRNYESTCVSLDEILEGC 396
+ + N VS+ R + EI E C
Sbjct: 631 TYGSLAN-GVSQARKPGDALLLWKEIKERC 659
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 92/228 (40%), Gaps = 3/228 (1%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP-RLAVEVDACCMNI 195
DKA+E M F P+ R N +++V + + A E++E R D +
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHF 184
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+G +G+L V G PN F ++ C G V EAF+ + M G
Sbjct: 185 CSRG--GRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSG 242
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
+ V V+++L+ + + M++ G PN+ +Y ++ G +D EA
Sbjct: 243 ISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
V+ + S G P V ++ R R EE + ++ VP
Sbjct: 303 TVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVP 350
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%)
Query: 152 WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
+P+R F +L + A +V + V ++L+ G + GE AV
Sbjct: 209 YPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVD 268
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
+F++ + G PN+ T+++L+ G + GMV+EAF L K++ G+ PD+V+ N++I
Sbjct: 269 LFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYT 328
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
V + ++ P+ ++ +L L + +F
Sbjct: 329 RLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 7/274 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT--LIKLYAHVARRIDKAVETLLSM 146
TSLI ++D T+L + ++ + D +I Y + R ++A + S+
Sbjct: 286 TSLIKGFVDLGMVDEAFTVLSK-VQSEGLAPDIVLCNLMIHTYTRLGR-FEEARKVFTSL 343
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGEL 206
+ P + TF +L+ L + +D+ + + + D N+L + G
Sbjct: 344 EKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG---IGTDFDLVTGNLLSNCFSKIGYN 400
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
S A+KV + T++ + LC G A + + + K D + +
Sbjct: 401 SYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAI 460
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I + + + + +V SY + GL+ AKR EA + M G
Sbjct: 461 IDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGI 520
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
P+ +++ ++ GLC+ + TE+V LR+ +++G
Sbjct: 521 YPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 89/224 (39%), Gaps = 1/224 (0%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
C P+ + ++++L L D EV++ P V LI + G ++
Sbjct: 137 CKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSL 196
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL-EKMEKCGVCPDVVVFNVLIXX 269
++ D + P++ T++T+++ G+ E L +M G+ PD+V +N L+
Sbjct: 197 ELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 270 XXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPS 329
V M G P++ +Y ++ +R + +++ M S G +P
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 330 FVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
S+ L+ + +E QM G P + ++N
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLN 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 11/296 (3%)
Query: 83 PTEPFCTSLITKLAHANLLDP----IHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDK 138
P E T +I+ L LLD + Q + R FS + LI Y R +
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFS---YTALINAYGRNGR-YET 194
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAG--EVYEAAPRLAVEVDACCMNIL 196
++E L M + + PS T+N V+N L D G ++ ++ D N L
Sbjct: 195 SLELLDRMKNEKISPSILTYNTVINACARGGL-DWEGLLGLFAEMRHEGIQPDIVTYNTL 253
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ +G A VF G+ P++ T+S L+ + +E+ + L +M G
Sbjct: 254 LSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS 313
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PD+ +NVL+ V M G PN +Y +L + R+ + +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+ M S P ++ L+ +EV MV + P M + I+
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII 429
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 95/256 (37%), Gaps = 7/256 (2%)
Query: 115 RSFSDDFFFTLIKLYAHVA------RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVAN 168
R+ +D + Y+H+ RR++K + L M P ++N +L +
Sbjct: 271 RTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKS 330
Query: 169 RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
A V+ +A ++L+ Q G ++F E S +P+ T+
Sbjct: 331 GSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 390
Query: 229 STLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
+ L+ E G +E M + + PD+ + +I +L M
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTA 450
Query: 289 KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
P+ +Y V+ A + EAL M G PS +F L+ R +E
Sbjct: 451 NDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKE 510
Query: 349 VDWALRQMVRQGFVPR 364
+ L ++V G +PR
Sbjct: 511 SEAILSRLVDSG-IPR 525
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 8/274 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSF-SDDFFFTLIKLYAHVARRIDKAVETLLSMP 147
++ L + H + + KR F ++ + L+ YA A ++D+AV
Sbjct: 147 NEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYA-AAHKVDEAVGVFERRK 205
Query: 148 DFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELS 207
+F F+ +L L + + A ++ + R D MN+++ G C G +
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLF-CSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
A + + + S P+V ++ T+++ L +KG + +A E M PDV + N +I
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF- 326
V + KG PNV +Y +L L +R + E+VE M +G
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGS 384
Query: 327 -VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
P+ V+F L L +R+++VD L +M +
Sbjct: 385 CSPNDVTFSYL---LKYSQRSKDVDIVLERMAKN 415
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 87/213 (40%), Gaps = 34/213 (15%)
Query: 150 QCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAA 209
+C P ++ ++N L A E+Y A D N +I LC + + A
Sbjct: 277 KCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEA 336
Query: 210 VKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME-KCGVCP---------- 258
++VF E + G +PNV T+++L+ LC+ E+ +E +E+ME K G C
Sbjct: 337 LEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL 396
Query: 259 ---------DVVV--------------FNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
D+V+ +N++ + M R G P+
Sbjct: 397 KYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQ 456
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
+Y ++GL + EAL + M+S+G VP
Sbjct: 457 RTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 11/209 (5%)
Query: 57 TLCNSLNHPSSAVTLLHLYTARKDF--NPTEPFCTSLITKLAHANLLDPIHTLLHQTLKR 114
T+ N+L + LY A D NP C ++I L + + + ++
Sbjct: 287 TMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEK 346
Query: 115 RSFSDDFFFTLIKLYAHVA--RRIDKAVETL--LSMPDFQCWPSRRTFNFVLNVLVANRL 170
D T L H+ RR +K E + + + C P+ TF+++L ++
Sbjct: 347 --GPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKD 404
Query: 171 YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
D+ V E + E+ + N++ + Q + +++ E +SGL P+ RT++
Sbjct: 405 VDI---VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTI 461
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKCGVCPD 259
+HGL KG + EA + ++M G+ P+
Sbjct: 462 RIHGLHTKGKIGEALSYFQEMMSKGMVPE 490
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 94/261 (36%), Gaps = 37/261 (14%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A+E M D P T N VL+ + R Y A +E V D NI+I
Sbjct: 231 EALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 198 KGLCQQGELSAAVK-------------------------------------VFDEFPKSG 220
L + G+ S A+ VF+ G
Sbjct: 291 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
L+PN+ +++ LM GM A L +++ G+ PDVV + L+
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
V MM ++ PNV +Y ++ EA+E+ M G P+ VS L+
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 470
Query: 341 CRHRRTEEVDWALRQMVRQGF 361
R ++ VD L +G
Sbjct: 471 SRSKKKVNVDTVLSAAQSRGI 491
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PSR T+N ++N ++ + A EV + V D NI++ + S A+
Sbjct: 211 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSY 270
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVC-PDVVVFNVLIXXX 270
F+ + + P+ TF+ +++ L + G +A + M EK C PDVV F ++
Sbjct: 271 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 330
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
V + MV +G PN+ SY ++ AL V+ + G +P
Sbjct: 331 SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 390
Query: 331 VSFKQLVVGLCRHR---RTEEVDWALRQMVRQ 359
VS+ L+ R R + +EV +R+ R+
Sbjct: 391 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 422
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 5/248 (2%)
Query: 119 DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
+D + +I+L+A +D+A M + C P T++ ++N + A +
Sbjct: 143 NDIYNMMIRLHAR-HNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 201
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
+ R A+ N LI G A++V + +G+ P++ T + ++
Sbjct: 202 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 261
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF--YPNVG 296
+A + E M+ V PD FN++I + + M K P+V
Sbjct: 262 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 297 SYQQVLYGLLDAKRFIEALEVV-EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
++ +++ L K IE V E MV+ G P+ VS+ L+ H + L
Sbjct: 322 TFTSIMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 380
Query: 356 MVRQGFVP 363
+ + G +P
Sbjct: 381 IKQNGIIP 388
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 1/235 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F +++ LY+ V I+ +M P+ ++N ++ + + A V
Sbjct: 323 FTSIMHLYS-VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 381
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ + D L+ + + A +VF K +PNV T++ L+ G +
Sbjct: 382 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 441
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA E +ME+ G+ P+VV L+ VL +G N +Y
Sbjct: 442 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 501
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+ ++A +A+ + + M + V+F L+ G CR + E L++M
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 1/190 (0%)
Query: 177 VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC 236
V AA + ++ N I EL A+ ++ K ++ + TF+ L+ G C
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 541
Query: 237 EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVG 296
EA +L++ME + V++ ++ + + M G P+V
Sbjct: 542 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 601
Query: 297 SYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+Y +L+ ++++ +A E+ M + G P ++ L+ + + V + L +
Sbjct: 602 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-FVLMDL 660
Query: 357 VRQGFVPRMG 366
+R+ +P G
Sbjct: 661 MREKEIPFTG 670
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 94/261 (36%), Gaps = 37/261 (14%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A+E M D P T N VL+ + R Y A +E V D NI+I
Sbjct: 99 EALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 158
Query: 198 KGLCQQGELSAAVK-------------------------------------VFDEFPKSG 220
L + G+ S A+ VF+ G
Sbjct: 159 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 218
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
L+PN+ +++ LM GM A L +++ G+ PDVV + L+
Sbjct: 219 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 278
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
V MM ++ PNV +Y ++ EA+E+ M G P+ VS L+
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 341 CRHRRTEEVDWALRQMVRQGF 361
R ++ VD L +G
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGI 359
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 5/212 (2%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PSR T+N ++N ++ + A EV + V D NI++ + S A+
Sbjct: 79 PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSY 138
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM-EKCGVC-PDVVVFNVLIXXX 270
F+ + + P+ TF+ +++ L + G +A + M EK C PDVV F ++
Sbjct: 139 FELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLY 198
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
V + MV +G PN+ SY ++ AL V+ + G +P
Sbjct: 199 SVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDV 258
Query: 331 VSFKQLVVGLCRHR---RTEEVDWALRQMVRQ 359
VS+ L+ R R + +EV +R+ R+
Sbjct: 259 VSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 100/248 (40%), Gaps = 5/248 (2%)
Query: 119 DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
+D + +I+L+A +D+A M + C P T++ ++N + A +
Sbjct: 11 NDIYNMMIRLHAR-HNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLM 69
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
+ R A+ N LI G A++V + +G+ P++ T + ++
Sbjct: 70 DDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSG 129
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMM--VRKGFYPNVG 296
+A + E M+ V PD FN++I + + M R P+V
Sbjct: 130 RQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 297 SYQQVLYGLLDAKRFIEALEVV-EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
++ +++ L K IE V E MV+ G P+ VS+ L+ H + L
Sbjct: 190 TFTSIMH-LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGD 248
Query: 356 MVRQGFVP 363
+ + G +P
Sbjct: 249 IKQNGIIP 256
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 93/235 (39%), Gaps = 1/235 (0%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
F +++ LY+ V I+ +M P+ ++N ++ + + A V
Sbjct: 191 FTSIMHLYS-VKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDI 249
Query: 182 PRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMV 241
+ + D L+ + + A +VF K +PNV T++ L+ G +
Sbjct: 250 KQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFL 309
Query: 242 EEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV 301
EA E +ME+ G+ P+VV L+ VL +G N +Y
Sbjct: 310 AEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSA 369
Query: 302 LYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+ ++A +A+ + + M + V+F L+ G CR + E L++M
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 1/190 (0%)
Query: 177 VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC 236
V AA + ++ N I EL A+ ++ K ++ + TF+ L+ G C
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSC 409
Query: 237 EKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVG 296
EA +L++ME + V++ ++ + + M G P+V
Sbjct: 410 RMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVI 469
Query: 297 SYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+Y +L+ ++++ +A E+ M + G P ++ L+ + + V + L +
Sbjct: 470 AYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNV-FVLMDL 528
Query: 357 VRQGFVPRMG 366
+R+ +P G
Sbjct: 529 MREKEIPFTG 538
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%)
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXX 281
EP+V + ++H LC + E A+ ++E++E G D V F +LI
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
L ++ KG+ P+V SY +L GL + +++ M G + S +FK +V G C
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 342 RHRRTEEVDWALRQMVRQGFV 362
+ R+ EE + +M G +
Sbjct: 440 KARQFEEAKRIVNKMFGYGLI 460
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 106/253 (41%), Gaps = 5/253 (1%)
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
+ ++ Y A+ + + LL M P TFNF+++ ++ Y + A
Sbjct: 912 YNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMI 971
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST-LMHGLCEKGMV 241
++ + + + LC G++ A+ ++ G T ++ L KG +
Sbjct: 972 SKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEI 1031
Query: 242 EEAFEWLEKMEKCGV-CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQ 300
+A ++L ++ + G+ P+ ++ +I +L+ M++ P SY
Sbjct: 1032 PKAEDFLTRVTRNGMMAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDS 1088
Query: 301 VLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V+ GLL + +A++ MV G PS ++ LV C + E + ++ MV G
Sbjct: 1089 VINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLG 1148
Query: 361 FVPRMGMWRHIVN 373
P M++ +++
Sbjct: 1149 ESPSQEMFKTVID 1161
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%)
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
E D N ++ LC++ A +E G + + TF L+ C +G ++ A
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
+L ++ G PDV +N ++ +LD M G ++ +++ ++ G
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 307 DAKRFIEALEVVEGMVSRGFVPS 329
A++F EA +V M G + +
Sbjct: 440 KARQFEEAKRIVNKMFGYGLIEA 462
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 82/166 (49%)
Query: 185 AVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEA 244
++V+ ++++++ C+ A++ F EF + + ++ L + G VEEA
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 245 FEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYG 304
FE L++M+ G+ PDV+ + LI ++D M+ G P++ +Y ++ G
Sbjct: 408 FELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSG 467
Query: 305 LLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVD 350
L E LE+ E M + G P+ V+ ++ GLC R+ +E +
Sbjct: 468 LARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A+E D + R +N + L + A E+ + + D LI
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLI 430
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G C QG++ A+ + DE +G+ P++ T++ L+ GL G EE E E+M+ G
Sbjct: 431 DGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Query: 258 PDVVVFNVLI 267
P+ V +V+I
Sbjct: 491 PNAVTNSVII 500
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 145/356 (40%), Gaps = 48/356 (13%)
Query: 50 LTPKQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSL-----ITKLAHANLLDPI 104
+T +A + + P A L +Y + + N T P + + +LA + I
Sbjct: 31 ITMSKAKSKLRKVQDPDKA---LAIYKSVSN-NSTSPLSSRYAMELTVQRLAKSQRFSDI 86
Query: 105 HTLLHQTLKRRSF-SDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLN 163
L+ ++ F TLI+ Y A D A++ M + +FN +L
Sbjct: 87 EALIESHKNNPKIKTETFLSTLIRSYGR-ASMFDHAMKMFEEMDKLGTPRTVVSFNALLA 145
Query: 164 VLVANRLYDVAGEVYEAAPRLAVEV--DACCMNILIKGLCQQGELSAAVKVFDEFPKSGL 221
+ + L++ ++++ P+ + D +LIK C G+ A+++ + G+
Sbjct: 146 ACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGV 205
Query: 222 EPNVRTFSTLMHGLCEKGMVEEAFE-WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
E + F+T++ L + G+V+EA W+E + K G D V+NV +
Sbjct: 206 EVTIIAFTTILGSLYKNGLVDEAESLWIEMVNK-GCDLDNTVYNVRL-MNAAKESPERVK 263
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYG------LLDAKRFIEALE--------------VVEG 320
+++ M G P+ SY ++ + +AK+ E LE + G
Sbjct: 264 ELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLEQPNAATFRTLIFHLCING 323
Query: 321 MVSRGF-----------VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
+ +G +P F + K L GL ++ R E+ R +V++ F PR+
Sbjct: 324 LYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKNNRMEDARGVAR-IVKKKFPPRL 378
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 101/256 (39%), Gaps = 3/256 (1%)
Query: 120 DFFFTLIKLYAHVARRIDKAVETLLSMPDFQ-CWPSRRTFNFVLNVLVANRLYDVAGEVY 178
D + +LI +Y + +DKA TL M C P TF +++ +D+ +
Sbjct: 180 DVYTSLISVYGK-SELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLE-PNVRTFSTLMHGLCE 237
L V N +I G + G V + + G P+V T ++++
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGN 298
Query: 238 KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
+ + W + + GV PD+ FN+LI V+D M ++ F +
Sbjct: 299 GRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVT 358
Query: 298 YQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMV 357
Y V+ A R + +V M +G P+ +++ LV + ++D LRQ+V
Sbjct: 359 YNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV 418
Query: 358 RQGFVPRMGMWRHIVN 373
V + I+N
Sbjct: 419 NSDVVLDTPFFNCIIN 434
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D A L SM C P TF+ ++N + D E++ R + +
Sbjct: 25 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 84
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
LI G CQ G+L AA + +E G+ P+ TF ++ GLC K + +AF LE ++K
Sbjct: 85 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +I G C+Q + A ++ D G P+V TFSTL++G C+ V+ E +M +
Sbjct: 14 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 73
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G+ + V + LI +L+ M+ G P+ ++ +L GL K +
Sbjct: 74 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 133
Query: 314 ALEVVEGM 321
A ++E +
Sbjct: 134 AFAILEDL 141
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%)
Query: 223 PNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXV 282
P T+++++ G C++ V++A L+ M G PDVV F+ LI +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 283 LDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCR 342
M R+G N +Y +++G A +++ M+S G P +++F ++ GLC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 343 HRR 345
+
Sbjct: 128 KKE 130
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 59/116 (50%)
Query: 152 WPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVK 211
+P+ T+N +++ D A + ++ D + LI G C+ + ++
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
+F E + G+ N T++TL+HG C+ G ++ A + L +M CGV PD + F+ ++
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 172 DVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV---------KVFDEFPKSGLE 222
D+A E+++ V D NIL+ GLC+ G+L A+ +F G++
Sbjct: 33 DMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVK 92
Query: 223 PNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
PNV T++T++ G C+KG EEA+ KM++ G PD +N LI
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 9/116 (7%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG---------MVEEAFE 246
LI+GL Q G+ A ++F E G+ P++ T++ L+ GLC+ G VE+ ++
Sbjct: 22 LIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWD 81
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
+ GV P+VV + +I + M G P+ G+Y ++
Sbjct: 82 LFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLI 137
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 112/295 (37%), Gaps = 2/295 (0%)
Query: 101 LDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNF 160
L+ L + L+R D+ FT I A +AVE M F C P T
Sbjct: 191 LEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG 220
+++ D+A +Y+ A +DA + LI+ G + +++E G
Sbjct: 251 MIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALG 310
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
++PN+ ++ L+ + +A + + G P+ + L+
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS-RGFVPSFVSFKQLVVG 339
+ M KG V Y +L D + EA E+ + M + P +F L+
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 340 LCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEILE 394
R E + AL QM GF P + + ++ C K + + + D++LE
Sbjct: 431 YACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQC-YGKAKQVDDVVRTFDQVLE 484
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 82/181 (45%), Gaps = 4/181 (2%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N+ +K + +L + K+FDE + G++P+ TF+T++ + G+ + A EW EKM
Sbjct: 179 NVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSS 238
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQV--LYGLLDAKRF 311
G PD V +I + D + + + ++ + +YG+ + +
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV--SGNY 296
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
L + E M + G P+ V + +L+ + R +R + + ++ GF P + +
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 372 V 372
V
Sbjct: 357 V 357
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 121/293 (41%), Gaps = 6/293 (2%)
Query: 68 AVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRR-SFSDDFFFTLI 126
A ++L + +KD P ++ +L D + L ++ K ++ + + +I
Sbjct: 612 ACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVI 671
Query: 127 KLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAV 186
A A +D+ T M + P+ TFN +L+V +L+ E++ A R V
Sbjct: 672 NCCAR-ALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV 730
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
VD N +I + + + G ++ ++TL+ + +E+
Sbjct: 731 -VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRS 789
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
L++M+K PD +N++I VL + G P++ SY ++
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRR-TEEVDWAL--RQM 356
EA+ +V+ M R +P V++ LV L R+ E + W+L +QM
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQM 902
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 5/176 (2%)
Query: 154 SRRTFNFVLNVLVANRLYDVAGEVYEAA-----PRLAVEVDACCMNILIKGLCQQGELSA 208
S +N+VL L N +D A ++++A P + V+ N+++ G C G+
Sbjct: 309 SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A++VF + P+ +F+ LM+ LC+ ++ EA + +ME+ V PD + +L+
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMD 428
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
MV PN+ Y ++ L+ A + +A + MVS+
Sbjct: 429 TCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 17/204 (8%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
TFN ++N A ++ A EV+ D N L+ LC L+ A K++ E
Sbjct: 352 TFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEM 411
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
+ ++P+ T+ LM ++G ++E + + M + + P++ V+N L
Sbjct: 412 EEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKL 471
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
DMMV K + +Y+ ++ L +A R E L++V+ M+ V
Sbjct: 472 DDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTV--------- 521
Query: 337 VVGLCRHRRTEEVDWALRQMVRQG 360
R +EE+ +++ +R+G
Sbjct: 522 -------RVSEELQEFVKEELRKG 538
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 87/221 (39%), Gaps = 11/221 (4%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS TF ++ LV+N + A E+ E VD + L+ G + + +K+
Sbjct: 199 PSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKL 258
Query: 213 FDEFPK--SGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM--EKCGVCPDVVVFNVLIX 268
+ E + G + + LM G K M +EA E E+ E V + +N ++
Sbjct: 259 YQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLE 318
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYP------NVGSYQQVLYGLLDAKRFIEALEVVEGMV 322
+ D V+K P N+G++ ++ G +F EA+EV M
Sbjct: 319 ALSENGKFDEALKLFDA-VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMG 377
Query: 323 SRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P +SF L+ LC + E + +M + P
Sbjct: 378 DFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP 418
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 40/201 (19%)
Query: 186 VEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVR------------------- 226
+++D NI+I GLC+ G+ A +F SGL+P+V+
Sbjct: 10 MDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGRAEKLYA 69
Query: 227 ------------TFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
T+++++HGLC++ + +A + V FN LI
Sbjct: 70 EMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTLINGYCKAT 120
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFK 334
+ M R+G NV +Y +++G F AL++ + MVS G S ++F+
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 335 QLVVGLCRHRRTEEVDWALRQ 355
++ LC + + L Q
Sbjct: 181 DILPQLCSRKELRKAVAMLLQ 201
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 212 VFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXX 271
+F +S ++ + ++ ++HGLC+ G +EA + G+ PDV +N++I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSS 60
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
M+R+G P+ +Y +++GL + +A +V + S
Sbjct: 61 LGRAEKLYAE----MIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSK---------SCS 107
Query: 332 SFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIV 372
+F L+ G C+ R ++ +M R+G V + + ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLI 148
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK-------GMVEEAFEWL 248
L+ G Q + A +V + +G+ P++ F++L+ LCE+ G+V EA +
Sbjct: 214 LLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIM 273
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
+M + P + +N+L+ +L+ M R G P+ GSY V+ L
Sbjct: 274 LEMRSYKIQPTSMSYNILLSCLGRTRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYLT 333
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALR 354
RF + ++V+ M+ RGF P + L+ LC E V++AL+
Sbjct: 334 GRFGKGNQIVDEMIERGFRPERKFYYDLIGVLC---GVERVNFALQ 376
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
+I I+ LC+ G+L A+ F + T+ +++HGL ++G +++A + + M++
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
G P V V+ LI M + P+V +Y ++ G + + E
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEE 942
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHI 371
A M RG P F ++ + + LC+ ++E+ L +M+ +G P +R +
Sbjct: 943 AWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTV 1000
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 43/301 (14%)
Query: 91 LITKLAHANLLDPIHTLLHQTLKRRSFSD-DFFFTLIKLYAHVARRIDKAVETLLSMPDF 149
L+ +A + +D + ++ ++ S+ D F L+K + V+ +I +A+E + + +
Sbjct: 300 LLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFC-VSGKIKEALELIRELKNK 358
Query: 150 QCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
+ + F ++ L ANR+ D A E+ + R ++ D+ I+I G +Q ++S
Sbjct: 359 EMCLDAKYFEILVKGLCRANRMVD-ALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSK 416
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A++ F+ KSG P V T++ +M L + E+ +M + G+ PD V
Sbjct: 417 ALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITA--- 473
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
V+ G L R EA +V M +G P
Sbjct: 474 --------------------------------VVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Query: 329 SFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVS 388
++ S+ V LCR R +E+ QM V R ++ +++ S +N E +
Sbjct: 502 TWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVIS---SMEKNGEKEKIH 558
Query: 389 L 389
L
Sbjct: 559 L 559
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 94/232 (40%), Gaps = 1/232 (0%)
Query: 132 VARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDAC 191
+A R D A+E M + RT+ +L+ + + DV + + R+ +
Sbjct: 271 IAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHD 330
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
L+K C G++ A+++ E + + + F L+ GLC + +A E ++ M
Sbjct: 331 AFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
++ + D V+ ++I +++ + G P V +Y +++ L K+F
Sbjct: 391 KRRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQF 449
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ + M+ G P V+ +V G R E M +G P
Sbjct: 450 EKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKP 501
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 84/238 (35%), Gaps = 3/238 (1%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDV--AGEVYEAAPRLAVEVDACCMNIL 196
A+ T M D PS TF ++ VL + +V A + R D +
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ LC+ G A D K G P +S + LC G +EEA L E
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
D + ++ ++ M G P V Y ++ K+ + LE
Sbjct: 851 LLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLE 910
Query: 317 VVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
+ M PS V++ ++ G + EE A R M +G P + +NC
Sbjct: 911 TCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
+N +L++ R D+ E+ + + D ILI + ++ + VF++
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMR 251
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
KSG E + ++ ++ LC G + A E+ ++M + G+ + + +L+
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVD 311
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
+ D MVR ++ +L + + EALE++ + ++ F+ LV
Sbjct: 312 VVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 338 VGLCRHRR 345
GLCR R
Sbjct: 372 KGLCRANR 379
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A E+Y++ P + +++ N ++ L + G+L + +K+FD+ + GL+P+V T++TL+
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 234 GLCE-KGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFY 292
G + K +A E + ++ G+ D V++ ++ + M +G
Sbjct: 210 GCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS 269
Query: 293 PNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
PN+ Y +L + +A E++ M S G VP+ V L+
Sbjct: 270 PNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLL 314
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANR-----LYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
M + C P +N ++ + R L V G + + + + NIL++
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
Q G++ +F + S + P+V TF+ +M + GM++E L +M PD+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
+ FNVLI ++R P + ++ ++ A+ +A V +
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 321 MVSRGFVPSFVSFKQLVV--GLC 341
M ++PSF++++ +++ G C
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYC 361
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 146 MPDFQCWPSRRTFNFVLNVLVANR-----LYDVAGEVYEAAPRLAVEVDACCMNILIKGL 200
M + C P +N ++ + R L V G + + + + NIL++
Sbjct: 159 MKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 201 CQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDV 260
Q G++ +F + S + P+V TF+ +M + GM++E L +M PD+
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDI 278
Query: 261 VVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
+ FNVLI ++R P + ++ ++ A+ +A V +
Sbjct: 279 ITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 321 MVSRGFVPSFVSFKQLVV--GLC 341
M ++PSF++++ +++ G C
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYC 361
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 99/261 (37%), Gaps = 35/261 (13%)
Query: 159 NFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPK 218
N +L L ++ YD A +++ V ++ + I C+ E + +++ DE K
Sbjct: 156 NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKK 215
Query: 219 SGLEPNVRTFSTL-MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
+ L N + L +H LC+ +AF LE++ PD + + V+
Sbjct: 216 ANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLY 275
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVE------------------ 319
VL + G P Y+ + L+ AKR EA EV E
Sbjct: 276 ERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALI 335
Query: 320 ----------------GMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
MVS G +P+ + +L LCRH +++ + A + +G+
Sbjct: 336 GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFS 395
Query: 364 RMGMWRHIVNCAVSKPRNYES 384
+ + +++ R ES
Sbjct: 396 ELQSYSLMISFLCKAGRVRES 416
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 1/220 (0%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D AVE L+ M P+ RT + + L + D + YE + +++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
I LC+ G + + E K GL P+V ++ L+ C+ M+ A + ++M G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
++ +NVLI + D M+ +G P+ Y ++ GL + A+E
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAME 523
Query: 317 VVEGMVSRGF-VPSFVSFKQLVVGLCRHRRTEEVDWALRQ 355
V + R + + V+ LC + + E LR+
Sbjct: 524 VFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRE 563
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 117 FSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGE 176
FS+ ++L+ + A R+ ++ L M P +N ++ + A +
Sbjct: 394 FSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKK 453
Query: 177 VYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLC 236
+++ +++ N+LI+ L ++GE ++++FD+ + G+EP+ + +L+ GLC
Sbjct: 454 LWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLC 513
Query: 237 EKGMVEEAFEWLEK-MEK 253
++ +E A E K ME+
Sbjct: 514 KETKIEAAMEVFRKCMER 531
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 111/280 (39%), Gaps = 21/280 (7%)
Query: 104 IHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLN 163
I + +Q ++R DD + T + ++ L +M PSR ++
Sbjct: 308 IGRICYQVMRRWLVKDDNWTT-------------RVLKLLNAMDSAGVRPSREEHERLIW 354
Query: 164 VLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEP 223
Y V E+Y+ E+ N LI + + + AA++++++ G EP
Sbjct: 355 ACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEP 414
Query: 224 N-------VRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
N V F+ L+ ++G+ L KME G+ P +N ++
Sbjct: 415 NNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASET 474
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQL 336
+ MV G P V SY +L L K + EA V M+ G P+ ++ +
Sbjct: 475 TAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTM 534
Query: 337 VVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN-CA 375
L ++ +D L++M +G P + + +++ CA
Sbjct: 535 ASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCA 574
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACC 192
A A++ +M D P+ ++ +L+ L +LYD A V+ ++ +E +
Sbjct: 471 ASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYA 530
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+ L Q + + + E G+EP+V TF+ ++ G G+ A+EW +M+
Sbjct: 531 YTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMK 590
Query: 253 KCGVCPDVVVFNVLI 267
V P+ + + +LI
Sbjct: 591 SENVEPNEITYEMLI 605
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 70/160 (43%)
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
L+ E+ NIL+ ++G V++ ++ GL+P R ++ ++ +
Sbjct: 417 LSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTA 476
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLY 303
A + + M G P V+ + L+ V + M++ G PN+ +Y +
Sbjct: 477 AIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMAS 536
Query: 304 GLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRH 343
L ++F +++ M S+G PS V+F ++ G R+
Sbjct: 537 VLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARN 576
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 46/289 (15%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQT---LKRRSFSDDFFFTLIKLYAHVARRID 137
FN ++ F L ++++ L+ + +L Q R++ D L KL RID
Sbjct: 71 FNTSDTF-KFLTNTASYSSYLEDLRRVLPQIDGGFSRKNAYDILISRLCKL-----GRID 124
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A+ + M + + + T++ +L L + A V E+ +V +D N +
Sbjct: 125 DALIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFL 184
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
C GEL +A +V + + G P+ R++ L+ G C G VE A L +ME+ GV
Sbjct: 185 TSHCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRRMEEDGV- 243
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
V+++ ++ V+ GL++ + LE
Sbjct: 244 --TVLYS--------------------------------THAHVITGLVEGGYYALGLEF 269
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMG 366
V + SF L L + +R EE +++MV +G RMG
Sbjct: 270 VMAYAGKDLRLDSESFGFLAGKLVKRKRYEEAMIVVKEMVMRGL--RMG 316
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 107/240 (44%), Gaps = 9/240 (3%)
Query: 122 FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAA 181
+ +IK Y +++ +KA E SM + P + T+N ++ +L + + G Y
Sbjct: 508 YNVMIKAYG-ISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH-KGRCYLEK 565
Query: 182 PRLAVEVDACC-MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGM 240
R V C +I + G+L+ A +V+ E + +EP+V + L++ + G
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGN 625
Query: 241 VEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR---KGFYPNVGS 297
V++A ++E M++ G+ + V++N LI + +++ K YP+V +
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYT 685
Query: 298 YQQVLYGLLDAKRFIEALEVV-EGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQM 356
+ L + + E + + M RG F +F ++ ++ R EE +QM
Sbjct: 686 -SNCMINLYSERSMVRKAEAIFDSMKQRGEANEF-TFAMMLCMYKKNGRFEEATQIAKQM 743
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 1/206 (0%)
Query: 196 LIKGLCQQ-GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
LI LC+ G ++ A ++ + ++ FS ++H LC V++A L M
Sbjct: 342 LITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISK 401
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEA 314
G P VFN+++ VL +M +G P+V +Y ++ G EA
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461
Query: 315 LEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
E++ + S V++ L+ G C+ +E L +M R G P + ++
Sbjct: 462 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Query: 375 AVSKPRNYESTCVSLDEILEGCNHLT 400
K ++E V +E+ + HL
Sbjct: 522 FCLKALDWEKAEVLFEEMKQKGLHLN 547
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 6/182 (3%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
R + A LL M P FN V++ D A EV + ++ D
Sbjct: 386 RNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTY 445
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
++I G + G + A ++ E K + + T+ L+ G C+ +EA + L +M++
Sbjct: 446 TVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDR 505
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVL-DMMVRKGFYPNVGSYQQVLYGLLDAKRFI 312
GV P+ +N LI VL + M +KG + N + GL+ A + +
Sbjct: 506 FGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNA-----ISQGLIRAVKEM 560
Query: 313 EA 314
E+
Sbjct: 561 ES 562
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 110/270 (40%), Gaps = 4/270 (1%)
Query: 72 LHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFT-LIKLYA 130
LH +F+ C LI L + + LL Q LK+ + + LI +
Sbjct: 202 LHKEMVESEFDSERIRC--LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 131 HVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDA 190
+ + E L +M + +PS + ++ L N+ A +++ D
Sbjct: 260 EIGNYACMS-EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDR 318
Query: 191 CCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEK 250
+I+G C++G L +A K++ E K G+ PN ++ ++HG ++G + + +
Sbjct: 319 VVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNE 378
Query: 251 MEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKR 310
M + G ++ N +I + M G PN +Y ++ G +
Sbjct: 379 MLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENK 438
Query: 311 FIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
+ L++ + + + G PS +++ LV L
Sbjct: 439 VEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 93/226 (41%), Gaps = 4/226 (1%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
KA ++ L F+ P + L L + A EVY + + N ++
Sbjct: 130 KAAKSFLDTTGFK--PEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVL 187
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
G + +L ++ E +S E + L+ LC+ G V E +E L++ K G+
Sbjct: 188 LGCLKARKLDRFWELHKEMVES--EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLD 245
Query: 258 PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEV 317
P V+ LI VL M+ +P++ YQ+++ GL K+ +EA +
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCI 305
Query: 318 VEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+ + +G+ P V + ++ G C +M+++G P
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRP 351
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 114/290 (39%), Gaps = 26/290 (8%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+ ++ ETLL P ++ ++ ++ + Y+ A +V+ + V
Sbjct: 226 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 285
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N L+ E+S K++D+ +S ++P+V +++ L+ EEA E+M
Sbjct: 286 NSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
GV P +N+L+ V M R +P++ SY +L ++A
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 402
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG------------- 360
A + + + GF P+ V++ L+ G + E++ +M G
Sbjct: 403 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 462
Query: 361 -------FVPRMGMWRHIVNCAV---SKPRNYESTCVSLDEILEGCNHLT 400
F +G ++ + +C V K +N + S + LE LT
Sbjct: 463 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 512
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 108 LHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
++ ++R D + LIK Y ARR ++A+ M D P+ + +N +L+
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGR-ARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
+ + + A V+++ R + D ++ ++ A K F G EPN+
Sbjct: 360 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 419
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
T+ TL+ G + VE+ E EKM G+ + + ++
Sbjct: 420 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 461
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 114/290 (39%), Gaps = 26/290 (8%)
Query: 134 RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCM 193
+ ++ ETLL P ++ ++ ++ + Y+ A +V+ + V
Sbjct: 233 KEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTY 292
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N L+ E+S K++D+ +S ++P+V +++ L+ EEA E+M
Sbjct: 293 NSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
GV P +N+L+ V M R +P++ SY +L ++A
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 409
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG------------- 360
A + + + GF P+ V++ L+ G + E++ +M G
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 361 -------FVPRMGMWRHIVNCAV---SKPRNYESTCVSLDEILEGCNHLT 400
F +G ++ + +C V K +N + S + LE LT
Sbjct: 470 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELT 519
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 108 LHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
++ ++R D + LIK Y ARR ++A+ M D P+ + +N +L+
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGR-ARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
+ + + A V+++ R + D ++ ++ A K F G EPN+
Sbjct: 367 AISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNI 426
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
T+ TL+ G + VE+ E EKM G+ + + ++
Sbjct: 427 VTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIM 468
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 3/191 (1%)
Query: 174 AGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMH 233
A ++Y+ +++D N +I+ + + ++VF E + G EPNV T +T++
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIK 302
Query: 234 GLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP 293
LCE G + +A+ L++M K G PD + + L + M+R G P
Sbjct: 303 LLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF---SRLEKPSEILSLFGRMIRSGVRP 359
Query: 294 NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWAL 353
+ +Y ++ L V + M G P ++ ++ L + +
Sbjct: 360 KMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYE 419
Query: 354 RQMVRQGFVPR 364
+M+ +G PR
Sbjct: 420 EEMIERGLSPR 430
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 3/172 (1%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEF 216
+N V+ + A++ + V+ E + N +IK LC+ G + A ++ DE
Sbjct: 261 AYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
Query: 217 PKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXX 276
PK G +P+ T+ L L + + F +M + GV P + + +L+
Sbjct: 321 PKRGCQPDSITYMCLFSRLEKPSEILSLF---GRMIRSGVRPKMDTYVMLMRKFERWGFL 377
Query: 277 XXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVP 328
V M G P+ +Y V+ L+ A E E M+ RG P
Sbjct: 378 QPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 77/172 (44%), Gaps = 3/172 (1%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N++++G + G + + + G+ ++ ++S M +C+ G +A + ++M+
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKS 252
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
+ DVV +N +I V M +G PNV ++ ++ L + R +
Sbjct: 253 RRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRM 365
A +++ M RG P +++ L R + E+ +M+R G P+M
Sbjct: 313 AYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKM 361
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A+++ D G P+ S+++H LC+ G +EA G PD NV+I
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 269 XXXXXXXXXXXXXVLDMMV--RKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
V+ ++ +K F P++ +Y +++ L R I+A ++V M +RG
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 327 VPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+P V+F L+ G C R E +M G P
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRP 230
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 5/217 (2%)
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
+A + L +F+ +PS T+ ++ L A V E R NI +
Sbjct: 360 RAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYL 419
Query: 198 KGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVC 257
+GLC + + V + P+ T +T+++GLC+ G V++A + L+ M C
Sbjct: 420 RGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFC 479
Query: 258 -PDVVVFNVLIXXXXXXXXXXXXXXVLD-MMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
PD V N ++ VL+ +M P V +Y V+ GL + EA+
Sbjct: 480 APDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAM 539
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWA 352
V + ++ ++ GLC T +VD A
Sbjct: 540 SVFGQLEKASVTADSTTYAIIIDGLC---VTNKVDMA 573
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 135/383 (35%), Gaps = 49/383 (12%)
Query: 53 KQATTLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTL 112
++ ++C +P A+ +L R + P +S+I L A D H L
Sbjct: 59 RRIHSICAVRRNPDEALRILDGLCLRG-YRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFL 117
Query: 113 KRRSFSDDFFFTLIK---LYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVA-N 168
D+ +I LY+ + L+ + PS +N ++N L
Sbjct: 118 ASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKK-EFVPSLTNYNRLMNQLCTIY 176
Query: 169 RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
R+ D V++ R + D LI G C+ EL A KVFDE G+ PN T
Sbjct: 177 RVIDAHKLVFDMRNRGHLP-DVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTL 235
Query: 229 STLMHG----------------------------------------LCEKGMVEEAFEWL 248
S L+ G +C +G + FE
Sbjct: 236 SVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIA 295
Query: 249 EKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDA 308
E M C + +I ++ +M KG P SY +++GL
Sbjct: 296 ENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKD 355
Query: 309 KRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMW 368
+ A +++E F PS ++K L+ LC+ T + L M+R+ R ++
Sbjct: 356 GGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIY 415
Query: 369 RHIVN--CAVSKPRNYESTCVSL 389
+ C + P + VS+
Sbjct: 416 NIYLRGLCVMDNPTEILNVLVSM 438
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 113/266 (42%), Gaps = 4/266 (1%)
Query: 62 LNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF 121
+++P+ + +L + + D P E ++I L +D +L + + + D
Sbjct: 425 MDNPTEILNVL-VSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDA 483
Query: 122 FFTLIKLYAHVAR-RIDKAVETLLS-MPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYE 179
+ +A+ R ++A++ L MP+ + P +N V+ L D A V+
Sbjct: 484 VTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFG 543
Query: 180 AAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKG 239
+ +V D+ I+I GLC ++ A K +D+ + ++ + GLC+ G
Sbjct: 544 QLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSG 603
Query: 240 MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQ 299
+ +A +L + G P+VV +N +I +L+ M + G P+ ++
Sbjct: 604 YLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW- 662
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRG 325
++L L D+ E++ + G
Sbjct: 663 RILDKLHDSMDLTVERELISNPATSG 688
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
+I LC+ A ++ GL+P +++ ++HGLC+ G A++ LE+ +
Sbjct: 313 MIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFE 372
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEAL 315
P + +L+ VL++M+RK Y L GL E L
Sbjct: 373 FFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEIL 432
Query: 316 EVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNCA 375
V+ M+ P + ++ GLC+ R ++ L M+ F + + V C
Sbjct: 433 NVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCG 492
Query: 376 V 376
+
Sbjct: 493 L 493
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 1/156 (0%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +I GLC+ G A ++ +E + P+ T+ LM LC++ +A LE M +
Sbjct: 346 NAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLR 405
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
++N+ + VL M++ P+ + V+ GL R +
Sbjct: 406 KEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDD 465
Query: 314 ALEVVEGMVSRGF-VPSFVSFKQLVVGLCRHRRTEE 348
A++V++ M++ F P V+ ++ GL R EE
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEE 501
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 88 CTSLITKLAHANLLDPIHTLLHQTL-----KRRSFSDDFFFTLIKLYAHVARRIDKAVET 142
C SL+ L +LLD + + H + K+R+ + F FT + L
Sbjct: 419 CISLLEDLDQRDLLD-MDKIYHASFFKACKKQRAVKEAFRFTKLILN------------- 464
Query: 143 LLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ 202
P+ TFN +++V +++ + A V + D LI +
Sbjct: 465 ----------PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAK 514
Query: 203 QGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
G++ A +VF + SG+E N+ TF L+ G G V +AF + V PD VV
Sbjct: 515 SGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVV 574
Query: 263 FNVLI 267
FN LI
Sbjct: 575 FNALI 579
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 110/279 (39%), Gaps = 6/279 (2%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
T+LI+ A + +D + + HQ ++ F + A ++ KA +
Sbjct: 506 TTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRS 565
Query: 149 FQCWPSRRTFNFVLNVL----VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQG 204
P R FN +++ +R +DV E+ A ++ D + L+K C G
Sbjct: 566 KNVKPDRVVFNALISACGQSGAVDRAFDVLAEM--KAETHPIDPDHISIGALMKACCNAG 623
Query: 205 ELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFN 264
++ A +V+ K G+ ++ ++ + G + A + M++ V PD V F+
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 265 VLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSR 324
LI +L +G SY ++ +AK + +ALE+ E + S
Sbjct: 684 ALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSI 743
Query: 325 GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
P+ + L+ LC + + L ++ G P
Sbjct: 744 KLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKP 782
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 3/157 (1%)
Query: 108 LHQTLKRRSFSDD--FFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVL 165
+++ +K + + D FF LI + H A+ +D+A L +++ ++
Sbjct: 666 IYKDMKEKDVTPDEVFFSALIDVAGH-AKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNV 225
+ + A E+YE + + MN LI LC+ +L A++ DE GL+PN
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 226 RTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVV 262
T+S LM K E +F+ L + + GV P++++
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIM 821
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/159 (18%), Positives = 68/159 (42%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNIL 196
D A M + P F+ +++V ++ D A + + A + + + L
Sbjct: 661 DFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL 720
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+ C + A++++++ L P + T + L+ LCE + +A E+L++++ G+
Sbjct: 721 MGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNV 295
P+ + +++L+ +L G PN+
Sbjct: 781 KPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNL 819
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
+ + E DA ++ LI + GE+ A KVF + E ++ F+ ++ G +
Sbjct: 145 KFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG----EQDLVVFNAMISGYANNSQAD 200
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
EA ++ M+ G+ PDV+ +N LI +L++M G+ P+V S+ ++
Sbjct: 201 EALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSII 260
Query: 303 YGLLDAKRFIEALEVVEGMVSRGFVPS 329
GL+ + +A + + M++ G P+
Sbjct: 261 SGLVHNFQNEKAFDAFKQMLTHGLYPN 287
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Query: 133 ARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDAC 191
R+IDK + L M +++C P T+N VL++L A + ++ G + +V V+
Sbjct: 190 TRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNII 249
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
N ++ G+ + + +++E + G+EP++ +++ ++ L G V+E+ ++M
Sbjct: 250 TYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEM 309
Query: 252 EKCGVCPDVVVFNVLI 267
++ + P V V+ LI
Sbjct: 310 KQRQIRPSVYVYRALI 325
>AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1918242-1919273 REVERSE
LENGTH=343
Length = 343
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D N L+ LC +L A+KV +E +G P+V ++ +++ LC + + +
Sbjct: 170 DTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIV 229
Query: 249 EKM-EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLD 307
++M K G+ P + + +++ + + + SY+ V+ G L+
Sbjct: 230 KEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEFESYEVVVEGCLE 289
Query: 308 AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
+ +I A +VV M RGF+P ++ +Q VV R +W L VRQ
Sbjct: 290 VREYILAGKVVMRMTDRGFIP-YIKVRQKVV----ERLINIGEWKLACTVRQ 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 2/173 (1%)
Query: 202 QQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVV 261
++G S A + +E G P+ T + L+ LC ++EA + +E+M G PDV
Sbjct: 149 RRGSQSVA-DIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVE 207
Query: 262 VFNVLIXXXXXXXXXXXXXXVLDMMVRK-GFYPNVGSYQQVLYGLLDAKRFIEALEVVEG 320
+ +I ++ MV K G P G +V L + +A+E++E
Sbjct: 208 SYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEF 267
Query: 321 MVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
+ SR + F S++ +V G R + +M +GF+P + + + +V
Sbjct: 268 VESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVE 320
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 282 VLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
+++ M G+ P+ G+ ++ L + EA++VVE M + G +P S+ ++ LC
Sbjct: 158 IINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLC 217
Query: 342 RHRRTEEVDWALRQMV-RQGFVPRMGM--------------WRHIVNCAVSKPRNYESTC 386
R+T +V +++MV + G PR GM W+ I + R+Y
Sbjct: 218 LARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYPVEF 277
Query: 387 VSLDEILEGC 396
S + ++EGC
Sbjct: 278 ESYEVVVEGC 287
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%)
Query: 196 LIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG 255
LI G GEL A ++F E G PNV T+++++ GLC G EA L++ME G
Sbjct: 730 LIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 789
Query: 256 VCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGS 297
P+ VV++ L+ V+ MV+KG Y ++ S
Sbjct: 790 CNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVS 831
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 244 AFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLY 303
A L M++ G+ P V+ + LI + M KG PNV +Y ++
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 304 GLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG--- 360
GL A F EA +++ M SRG P+FV + LV L + + E +++MV++G
Sbjct: 768 GLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYV 827
Query: 361 -FVPRMGMWR 369
V +M +R
Sbjct: 828 HLVSKMMKYR 837
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Query: 208 AAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
AA+ + + G++P+V ++TL+ G G +++A E +M G P+V +N +I
Sbjct: 707 AALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMI 766
Query: 268 XXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+L M +G PN Y ++ L A + EA +V++ MV +G
Sbjct: 767 RGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG-- 824
Query: 328 PSFVSFKQLVVGLCRHRR 345
+ LV + ++RR
Sbjct: 825 ----HYVHLVSKMMKYRR 838
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 106/261 (40%), Gaps = 42/261 (16%)
Query: 123 FTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
F ++ YA A +A+ T M F+ P F +L L + + A E A+
Sbjct: 193 FLMMDRYA-AANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASK 251
Query: 183 RLAVEVDACCMNILIKGLC------------------------------------QQGEL 206
+L VD N+++ G C + G L
Sbjct: 252 KL-FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310
Query: 207 SAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVL 266
+++++DE K GL P + +++L++ L + +EA + ++K+ + G+ PD V +N +
Sbjct: 311 FDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 267 IXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
I VL M+ + P V ++ + L+A F + LEV+ M
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDL 426
Query: 327 VPSFVSFKQLVVGLCRHRRTE 347
P+ +F ++ L + ++ E
Sbjct: 427 GPTEETFLLILGKLFKGKQPE 447
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 4/175 (2%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
P +N ++ VL +D A ++ + ++ D+ N +I+ LC+ G+L A V
Sbjct: 327 PGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNV 386
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
L P V TF H E E+ E L +M+ + P F +++
Sbjct: 387 LATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFK 442
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFV 327
+ M R N Y + GLL +A E+ M S+GFV
Sbjct: 443 GKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFV 497
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 119/289 (41%), Gaps = 4/289 (1%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDF--FFTLIKLYAHVARRIDKAVETLLSM 146
T+L++ + + D TLL + + D + LIK + V DK + L M
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFA-FDKVQDLLSDM 247
Query: 147 PDFQCWPSRRTFNFVLNVLVANRLY-DVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGE 205
P+ T+N +++ +++ ++ + + + D+ MN ++ G+
Sbjct: 248 RRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQ 307
Query: 206 LSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
+ +++F SG+EPN+RTF+ L+ + G ++ +E M+K +V +NV
Sbjct: 308 IEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNV 367
Query: 266 LIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG 325
+I + +M + +P+ + ++ A + + V+ + +
Sbjct: 368 VIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSD 427
Query: 326 FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVNC 374
V F LV R + E+ L M ++GF P +R +V
Sbjct: 428 IRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKA 476
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
I++ G C+Q E A ++F E G N ++ L+ G + AF LE+M+
Sbjct: 157 IVMLGKCKQPE--KAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSS 214
Query: 255 GVC-PDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
C PDV +++LI +L M R+G PN +Y ++ AK F+E
Sbjct: 215 HNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVE 274
>AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=773
Length = 773
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 111/282 (39%), Gaps = 35/282 (12%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI- 195
++AV L M + + P RT+ + + L+ YE L+ +VD CC I
Sbjct: 420 ERAVRVLARMKELKLRPDMRTYELLFS------LFGNVNAPYEEGNMLS-QVD-CCKRIN 471
Query: 196 --------------------LIKGLCQQGELSAAVKVFDEFPKSGLEPNVR----TFSTL 231
+++ L +G ++ ++ + N+ T++ +
Sbjct: 472 AIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIV 531
Query: 232 MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+H L E + ++M+ CG DV +N++I ++ MM+R GF
Sbjct: 532 LHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGF 591
Query: 292 YPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDW 351
P ++ ++ LL+ F EAL +++ +S+ ++ + +++
Sbjct: 592 SPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEY 651
Query: 352 ALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEIL 393
+ QM R+ P ++ +C V K Y +T + +L
Sbjct: 652 IVEQMHREKVNPDPTTCHYVFSCYVEK--GYHATAIEALNVL 691
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/282 (18%), Positives = 111/282 (39%), Gaps = 35/282 (12%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI- 195
++AV L M + + P RT+ + + L+ YE L+ +VD CC I
Sbjct: 448 ERAVRVLARMKELKLRPDMRTYELLFS------LFGNVNAPYEEGNMLS-QVD-CCKRIN 499
Query: 196 --------------------LIKGLCQQGELSAAVKVFDEFPKSGLEPNVR----TFSTL 231
+++ L +G ++ ++ + N+ T++ +
Sbjct: 500 AIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIV 559
Query: 232 MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+H L E + ++M+ CG DV +N++I ++ MM+R GF
Sbjct: 560 LHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGF 619
Query: 292 YPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDW 351
P ++ ++ LL+ F EAL +++ +S+ ++ + +++
Sbjct: 620 SPKAVTFTALMKILLNDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEY 679
Query: 352 ALRQMVRQGFVPRMGMWRHIVNCAVSKPRNYESTCVSLDEIL 393
+ QM R+ P ++ +C V K Y +T + +L
Sbjct: 680 IVEQMHREKVNPDPTTCHYVFSCYVEK--GYHATAIEALNVL 719
>AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=575
Length = 575
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 21/191 (10%)
Query: 182 PRLAVEVDACCMNILIK--GLCQQGELSAAVKVFDEFPKS-GLE--PNVRTFSTLMHGLC 236
PR E C +I I+ G + G+L AV +F S LE P +RT+ L L
Sbjct: 159 PRFTHE--NCSYHIAIRKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALL 216
Query: 237 EKG--------MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
+G +E +M G+ PDV N L+ +L M
Sbjct: 217 GRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVKGRTINTRE-----LLSEMKG 271
Query: 289 KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
KGF PN SY ++ + +A++ + M+ G V F+S++ LV CR + +E
Sbjct: 272 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 331
Query: 349 VDWALRQMVRQ 359
L +M+R+
Sbjct: 332 ATRLL-EMLRE 341
>AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:9620810-9624990 FORWARD LENGTH=550
Length = 550
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 81/191 (42%), Gaps = 21/191 (10%)
Query: 182 PRLAVEVDACCMNILIK--GLCQQGELSAAVKVFDEFPKS-GLE--PNVRTFSTLMHGLC 236
PR E C +I I+ G + G+L AV +F S LE P +RT+ L L
Sbjct: 134 PRFTHE--NCSYHIAIRKLGAAKSGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALL 191
Query: 237 EKG--------MVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
+G +E +M G+ PDV N L+ +L M
Sbjct: 192 GRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVKGRTINTRE-----LLSEMKG 246
Query: 289 KGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEE 348
KGF PN SY ++ + +A++ + M+ G V F+S++ LV CR + +E
Sbjct: 247 KGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDE 306
Query: 349 VDWALRQMVRQ 359
L +M+R+
Sbjct: 307 ATRLL-EMLRE 316
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 187 EVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFE 246
E + N +I G Q G + A+++FDE P E N+ ++++++ L ++G ++EA
Sbjct: 137 ERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 247 WLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLL 306
E+M + DVV + ++ + D M + N+ S+ ++ G
Sbjct: 193 LFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYA 244
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMG 366
R EA ++ + M R F S+ ++ G R+R + +M + +
Sbjct: 245 QNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEKNVIS--- 297
Query: 367 MWRHIVNCAVSKPRNYESTCV 387
W ++ V N E+ V
Sbjct: 298 -WTTMITGYVENKENEEALNV 317
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 83/204 (40%), Gaps = 12/204 (5%)
Query: 161 VLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSG 220
++++ V N + A +V++ +P D LIKG +G + A K+FDE P
Sbjct: 175 LISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIPVK- 229
Query: 221 LEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
+V +++ ++ G E G +EA E + M K V PD ++
Sbjct: 230 ---DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGR 286
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGL 340
V + GF GS +++ L+D LE G+ R +S+ L+ G
Sbjct: 287 QVHLWIDDHGF----GSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342
Query: 341 CRHRRTEEVDWALRQMVRQGFVPR 364
+E ++M+R G P
Sbjct: 343 THMNLYKEALLLFQEMLRSGETPN 366
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 5/170 (2%)
Query: 169 RLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTF 228
++ + EV+ A ++ D N L+ + G+L A KVFD +V T+
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN----KDVYTW 421
Query: 229 STLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR 288
++++ G C+ G +A+E +M+ + P+++ +N +I + M +
Sbjct: 422 NSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEK 481
Query: 289 KG-FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
G N ++ ++ G + + EALE+ M F+P+ V+ L+
Sbjct: 482 DGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLL 531
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 37/252 (14%)
Query: 158 FNFVLNVLVANRLYDVAGEV--YEAAPRLAVEV---DACCMNILIKGLCQQGELSAAVKV 212
F+ +VLV N L D+ + E A ++ V D N +I G CQ G A ++
Sbjct: 381 MGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCG-VCPDVVVFNVLIXXXX 271
F + L PN+ T++T++ G + G EA + ++MEK G V + +N++I
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 272 XXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL---YGLLDAK-----------RFIEALEV 317
+ M F PN + +L LL AK R ++A+
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHA 560
Query: 318 VEGMVSRGFVPS-----------------FVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
V+ ++ + S +++ L+ G H QM QG
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 361 FVPRMGMWRHIV 372
P G I+
Sbjct: 621 ITPNRGTLSSII 632
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 96/254 (37%), Gaps = 14/254 (5%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFF-TLIKLYAHV----ARRIDKAVETL 143
+++I + N + L +K DDF F +++ A+ A ++ +V
Sbjct: 150 SAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIK 209
Query: 144 LSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQ 203
L M R N +L V D A + + R E D N ++ CQ
Sbjct: 210 LGMS-----SCLRVSNSILAVYAKCGELDFATKFF----RRMRERDVIAWNSVLLAYCQN 260
Query: 204 GELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVF 263
G+ AV++ E K G+ P + T++ L+ G + G + A + ++KME G+ DV +
Sbjct: 261 GKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
Query: 264 NVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVS 323
+I + M G PN + + K + EV V
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 324 RGFVPSFVSFKQLV 337
GF+ + LV
Sbjct: 381 MGFIDDVLVGNSLV 394
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 12/187 (6%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N ++ L + ++ V DE +G + ++ T+ + + M+ E + E M
Sbjct: 267 NAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMD 326
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVR-KGFYPNVGS------YQQVLYGLL 306
P + ++L+ LD++ R Y + G Y + L
Sbjct: 327 GPFKPSIQDCSLLLRYLSGSPNPD-----LDLVFRVSRKYESTGKSLSKAVYDGIHRSLT 381
Query: 307 DAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMG 366
RF EA E+ + M + G+ P +++ QLV GLC+ +R EE L QM QG P +
Sbjct: 382 SVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIK 441
Query: 367 MWRHIVN 373
W ++
Sbjct: 442 TWTILIQ 448
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 154 SRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
S+ ++ + L + +D A E+ +A E D + L+ GLC+ L A V
Sbjct: 369 SKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVL 428
Query: 214 DEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXX 273
D+ G P+++T++ L+ G C+ +++A M + G D + +VLI
Sbjct: 429 DQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIH 488
Query: 274 XXXXXXXXVLDMMVRKG-FYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFV 331
L MV+ P +Y+ ++ LL K+ EAL++++ M + + P++
Sbjct: 489 NKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNY-PAYA 546
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 14/221 (6%)
Query: 153 PSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKV 212
PS T+ ++ V++A Y++ E + + ++ +A +L+ L ++G+ AV
Sbjct: 626 PSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLWKEGKSDEAVHT 684
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXX 272
++ G+ + + L LC G E L+K+ + P VV + LI
Sbjct: 685 VEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVD 744
Query: 273 XXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRG------- 325
+ D M +K PN+ + +L L F EA E+ + M G
Sbjct: 745 SGNIKNAAYIFDQM-KKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSS 803
Query: 326 -----FVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+P +F ++ + ++ +A R+M+R G+
Sbjct: 804 DFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGY 844
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%)
Query: 139 AVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIK 198
A++ L M P R + V+ V + + E++ A RL D C + I
Sbjct: 101 AIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFIT 160
Query: 199 GLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCP 258
C+ GE A KVFDE P E + +++ ++ GL G EA E M++ G+ P
Sbjct: 161 LYCKAGEFENARKVFDENP----ERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEP 216
Query: 259 D 259
D
Sbjct: 217 D 217
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 107/271 (39%), Gaps = 50/271 (18%)
Query: 81 FNPTEPFCTSLITKLAHANLLDPIHTLLHQT---LKRRSFSDDFFFTLIKLYAHVARRID 137
FN T F L ++++ L+ + +L QT R+ + L KL RID
Sbjct: 89 FNTTATF-KFLTNTDSYSSSLEDLRRILPQTDAGYTRKHSYETLIARLCKL-----GRID 142
Query: 138 KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILI 197
A+ + M + S F+ +LN L + A V E A+ VD N +
Sbjct: 143 DALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMRSHAIPVDVTSYNYFL 202
Query: 198 KGLCQQGELSAAVKVF---DEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKC 254
C G+++ A +V +E + + P+ RT+ L+ G C+ G VE A L +ME+
Sbjct: 203 TSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKSGRVEAAMAILRRMEEE 262
Query: 255 GVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYP-------------------NV 295
G+ V++ V+ MV G+Y N+
Sbjct: 263 GLS---VLY-------------ATHAHVIGEMVESGYYALSVEFVMAYAGKDKRLDEENL 306
Query: 296 GSYQQVLYGLLDAKRFIEALEVVEGMVSRGF 326
GS L+ KRF EA V++ M RG
Sbjct: 307 GSLAS---KLIKRKRFKEAKMVLKEMSVRGL 334
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 4/184 (2%)
Query: 119 DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVY 178
DD + I + + +KAVE M T +L V + +++
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
RL +E + N LI + G+L + KVF+ + N+ ++++++ +
Sbjct: 113 GYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKL 168
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSY 298
G V++A L++ME CG+ PD+V +N L+ VL M G P+ S
Sbjct: 169 GYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI 228
Query: 299 QQVL 302
+L
Sbjct: 229 SSLL 232
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 112/297 (37%), Gaps = 35/297 (11%)
Query: 72 LHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAH 131
+H Y R C SLI + L+ + + ++K R+ S + +++ Y
Sbjct: 111 IHGYVLRLGLESNVSMCNSLIVMYSRNGKLE-LSRKVFNSMKDRNLSS--WNSILSSYTK 167
Query: 132 VARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDAC 191
+ +D A+ L M P T+N +L+ + L A V + ++
Sbjct: 168 LGY-VDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTS 226
Query: 192 CMNILIKGLCQQGELSAAVKV-------------------FDEFPKSGLEP--------- 223
++ L++ + + G L + D + K+G P
Sbjct: 227 SISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMM 286
Query: 224 ---NVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXX 280
N+ +++L+ GL ++++A + +MEK G+ PD + +N L
Sbjct: 287 DAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKAL 346
Query: 281 XVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
V+ M KG PNV S+ + G F AL+V M G P+ + L+
Sbjct: 347 DVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 194 NILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEK 253
N +I G + G++ A K+FD+ P E ++ +++ +++G +KG EEA W +M+
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMP----ERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIE 313
GV PD V + V ++ + F NV +V L+D
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNV----RVSNSLIDLYCRCG 255
Query: 314 ALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVP 363
+E + + VS+ ++VG + E R+M +GF P
Sbjct: 256 CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKP 305
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 1/169 (0%)
Query: 193 MNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKME 252
+ IL+ LC + + A K+ DE G R ++ + L + G + ++L+K+
Sbjct: 289 LGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKIS 348
Query: 253 KCGVCP-DVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
C +V +N ++ +L M+ +G PN + L A
Sbjct: 349 PLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV 408
Query: 312 IEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQG 360
EALE+ GF P+ +S+ L+ LC + E+ L+ + +G
Sbjct: 409 DEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 98/269 (36%), Gaps = 39/269 (14%)
Query: 156 RTFNFVLNVLV-ANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFD 214
R +N + L+ A L + A + + +P E++ N ++ L ++ L +
Sbjct: 322 RAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILT 381
Query: 215 EFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXX 274
E G+ PN +T + + C+ G V+EA E + G P + +N LI
Sbjct: 382 EMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANE 441
Query: 275 XXXXXXXVLDMMVRKGFYPNVGSYQ----------------------------------- 299
VL + +G + ++
Sbjct: 442 SVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGC 501
Query: 300 QVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQ 359
+++ L D + +AL + E G SF F L+ G R + + +M +
Sbjct: 502 KIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEK 561
Query: 360 GFVPRMGMWRHIVNCAV---SKPRNYEST 385
G+ P ++R+++ C S +N+ +T
Sbjct: 562 GYTPTRSLYRNVIQCVCEMESGEKNFFTT 590
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 87/214 (40%)
Query: 89 TSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAHVARRIDKAVETLLSMPD 148
S++ +L N LD ++ +L + + R + + A +D+A+E S +
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 149 FQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSA 208
P+ ++N++++ L AN + A +V + A + + L LC +G+
Sbjct: 421 IGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDM 480
Query: 209 AVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIX 268
A ++ + L P ++ LC+ G VE+A E K GV +F LI
Sbjct: 481 ARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIY 540
Query: 269 XXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
++ M KG+ P Y+ V+
Sbjct: 541 GSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 114 RRSFSDDFFF--TLIKLYAHVARRID-KAVETLLSMPDFQCWPSRRTFNFVLNVLVANRL 170
R SF D T++ +YA +D K V D W N +L + L
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW------NTLLAAYAESGL 456
Query: 171 YDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFST 230
A ++ V + N++I L + G++ A +F + SG+ PN+ +++T
Sbjct: 457 SGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTT 516
Query: 231 LMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNV 265
+M+G+ + G EEA +L KM++ G+ P+ V
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITV 551
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/308 (20%), Positives = 119/308 (38%), Gaps = 15/308 (4%)
Query: 44 FQQKDWLTPKQAT-----TLCNSLNHPSSAVTLLHLYTARKDFNPTEPFCTSLITKLAHA 98
+++ + PK+ T L P+ A L + PT T+L+ +
Sbjct: 114 LREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFD-EMLEEGLEPTVELYTALLAAYTRS 172
Query: 99 NLLDPIHTLLHQTLKRRSFS----DDFFFTLIKLYAHVARRIDKAVETLLSMPDFQCWPS 154
NL+D ++L K +SF D F ++ + A + D M + P+
Sbjct: 173 NLIDDAFSILD---KMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPN 229
Query: 155 RRTFNFVLNVLVANRLYDVAGEVY-EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
T N VL+ +D +V + A + D MNI++ G++ +
Sbjct: 230 TVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWY 289
Query: 214 DEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXX 273
++F G+EP RTF+ L+ +K M ++ +E M K +N +I
Sbjct: 290 EKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADV 349
Query: 274 XXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
D M +G + ++ ++ G +A F + + V+ + ++ +P +F
Sbjct: 350 GDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQ-LAAKFEIPENTAF 408
Query: 334 KQLVVGLC 341
V+ C
Sbjct: 409 YNAVISAC 416
>AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28618365-28622581 REVERSE
LENGTH=693
Length = 693
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 84/208 (40%), Gaps = 33/208 (15%)
Query: 137 DKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNI- 195
++AV L M + + P RT+ + + L+ YE L+ +VD CC I
Sbjct: 452 ERAVRVLARMKELKLRPDMRTYELLFS------LFGNVNAPYEEGNMLS-QVD-CCKRIN 503
Query: 196 --------------------LIKGLCQQGELSAAVKVFDEFPKSGLEPNVR----TFSTL 231
+++ L +G ++ ++ + N+ T++ +
Sbjct: 504 AIEMDMMRNGFQHSPISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIV 563
Query: 232 MHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGF 291
+H L E + ++M+ CG DV +N++I ++ MM+R GF
Sbjct: 564 LHSLLEANETDMVINIFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGF 623
Query: 292 YPNVGSYQQVLYGLLDAKRFIEALEVVE 319
P ++ ++ LL+ F EAL +++
Sbjct: 624 SPKAVTFTALMKILLNDANFEEALNLLD 651
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 157 TFNFVLNVLVANRLYDVAGEVYEAAPRLA----VEVDACCMNILIKGLCQQGELSAAVKV 212
++N +L D+A ++Y+ A R+ +++DA +IK A+KV
Sbjct: 337 SYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKV 396
Query: 213 FDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLI 267
D+ G+ PN T+S+L+ G+VE+A E+M G P+ FN+L+
Sbjct: 397 KDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILL 451
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 9/168 (5%)
Query: 179 EAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEK 238
+A+ R + NIL+K C + ++ DE GL PN T+STL+
Sbjct: 515 QASKRFCFKPTTATYNILLKA-CGT-DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGS 572
Query: 239 GMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSY 298
G VE A L M G PDVV + I + + M R PN +Y
Sbjct: 573 GDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTY 632
Query: 299 QQVL-----YGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLC 341
+L YG L R + L + + M + G+ P+ K+L+ C
Sbjct: 633 NTLLKARSKYGSLLEVR--QCLAIYQDMRNAGYKPNDHFLKELIEEWC 678
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/187 (18%), Positives = 77/187 (41%)
Query: 151 CWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAV 210
C P T + ++N L + A + +E+D N LIK + + G+L A
Sbjct: 735 CDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCAS 794
Query: 211 KVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXX 270
++++ SG+ +++T++T++ +++A E + G+ D ++ +I
Sbjct: 795 EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHY 854
Query: 271 XXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSF 330
+ M +KG P SY ++ ++ E E+++ M G
Sbjct: 855 GKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDL 914
Query: 331 VSFKQLV 337
++ L+
Sbjct: 915 STYLTLI 921
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 88/216 (40%)
Query: 158 FNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFP 217
+N ++ ++ A E+YE V N +I + +L A+++F
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 218 KSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXX 277
+SGL + + ++ ++ + G + EA +M+K G+ P +N+++
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHH 896
Query: 278 XXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSFKQLV 337
+L M R G ++ +Y ++ ++ +F EA + + + +G S F L+
Sbjct: 897 EVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLL 956
Query: 338 VGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRHIVN 373
L + EE + +M G P R I+
Sbjct: 957 SALVKAGMMEEAERTYCKMSEAGISPDSACKRTILK 992
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%)
Query: 154 SRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQQGELSAAVKVF 213
S +T+N +++V D A E++ A R + +D +I + G++S A+ +F
Sbjct: 808 SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Query: 214 DEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXX 273
E K G++P +++ ++ + E E L+ ME+ G C D+ + LI
Sbjct: 868 SEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAES 927
Query: 274 XXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
+ ++ KG + + +L L+ A EA M G P
Sbjct: 928 SQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACK 987
Query: 334 KQLVVG 339
+ ++ G
Sbjct: 988 RTILKG 993
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 112/305 (36%), Gaps = 13/305 (4%)
Query: 72 LHLYTARKDFNPTEPFCTSLITKLAHANLLDPIHTLLHQTLKRRSFSDDFFFTLIKLYAH 131
+H Y ++ TSL++ + L+ L R S + +I Y
Sbjct: 322 IHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVS---WSAMIASYEQ 378
Query: 132 VARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDAC 191
+ D+A+ M P+ T VL + ++ A + +E +
Sbjct: 379 AGQH-DEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELE 437
Query: 192 CMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKM 251
+I + G S A+K F+ P + F+ L G + G +AF+ + M
Sbjct: 438 TATAVISMYAKCGRFSPALKAFERLPI----KDAVAFNALAQGYTQIGDANKAFDVYKNM 493
Query: 252 EKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRF 311
+ GVCPD ++ V +++ GF S V + L++
Sbjct: 494 KLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGF----DSECHVAHALINMFTK 549
Query: 312 IEALEVVEGMVSR-GFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGFVPRMGMWRH 370
+AL + + GF S VS+ ++ G H + EE RQM + F P + +
Sbjct: 550 CDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVN 609
Query: 371 IVNCA 375
IV A
Sbjct: 610 IVRAA 614
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Query: 197 IKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGV 256
+K L G + A +V+ E +S + PN T++ LM L G EEA + KM++ GV
Sbjct: 199 MKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGV 258
Query: 257 CPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVLYGLLDAKRFIEALE 316
PD N+LI VL M G +L F+EALE
Sbjct: 259 QPDKAACNILIAKALKFGETSFMTRVLVYMKENGV-------------VLRYPIFVEALE 305
Query: 317 VVEG 320
++
Sbjct: 306 TLKA 309
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 15/193 (7%)
Query: 135 RIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPRLAVEVDACCMN 194
R+D ++ M P+ TF +L+ + V+ + ++ N
Sbjct: 201 RVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 195 ILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLE-KMEK 253
LI C+ G+L A ++FD+F +V ++++++ G + G+ +A E E M K
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSN----KDVVSWNSMIAGYAQHGLAMQAIELFELMMPK 316
Query: 254 CGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL-----YGLLDA 308
G PD + + ++ ++M G P + Y ++ +GLL
Sbjct: 317 SGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQ- 375
Query: 309 KRFIEALEVVEGM 321
EALE++E M
Sbjct: 376 ----EALELIENM 384
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
D NIL+ G ++G+ S V++FD KS + P+ TF +L+ G + MV + +
Sbjct: 562 DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF 621
Query: 249 EKMEKCGVCPDV 260
KME GV P++
Sbjct: 622 SKMEDYGVTPNL 633
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 124 TLIKLYAHVARRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAPR 183
TLI+ YA + L + + QC+P++ TF F++ + ++ A +
Sbjct: 100 TLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 184 LAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEE 243
AV D N LI G+L +A KVF E +V +++++++G +KG ++
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK----EKDVVSWNSMINGFVQKGSPDK 215
Query: 244 AFEWLEKME 252
A E +KME
Sbjct: 216 ALELFKKME 224
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%)
Query: 189 DACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWL 248
DA C N++I G G++ +A+ +FD+ +S ++P TF L+ G+VE+ +
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 657
Query: 249 EKMEKCGVCPDVVVFNVLI 267
KM + V P++ ++ L+
Sbjct: 658 LKMHQYDVKPNLKHYSCLV 676
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 82/209 (39%), Gaps = 16/209 (7%)
Query: 166 VANRLYDVAGEVYEAAPRLAVEVDACCMNILIKGLCQ----------QGELSAAVKVFDE 215
+A +L D A + R E+ N+++ +C+ Q E+ KV E
Sbjct: 257 IAEKL-DEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVE---KVLLE 312
Query: 216 FPKSGLEPNVRTFSTLMHGLCEKGMVEEAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXX 275
G+ N TF+ L++ LC+ EEA +M + G PD + VLI
Sbjct: 313 MEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAAR 372
Query: 276 XXXXXXVLDMMVRKGFYP--NVGSYQQVLYGLLDAKRFIEALEVVEGMVSRGFVPSFVSF 333
++D M G+ N Y L L +R A+ V + M + G P ++
Sbjct: 373 IGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTY 432
Query: 334 KQLVVGLCRHRRTEEVDWALRQMVRQGFV 362
L+ +C + + + ++ ++G
Sbjct: 433 DLLMGKMCANNQLTRANGLYKEAAKKGIA 461
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 20/242 (8%)
Query: 124 TLIKLYAHVA-RRIDKAVETLLSMPDFQCWPSRRTFNFVLNVLVANRLYDVAGEVYEAAP 182
TLI +Y + V + P+ W + T F R DVAG E
Sbjct: 146 TLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACF--------RGNDVAG-AREIFD 196
Query: 183 RLAVEVDACCMNILIKGLCQQGELSAAVKVFDEFPKSGLEPNVRTFSTLMHGLCEKGMVE 242
++ V + N+++ G + GEL +A ++F E P + ++ST++ G+ G
Sbjct: 197 KMLVR-NHTSWNVMLAGYIKAGELESAKRIFSEMP----HRDDVSWSTMIVGIAHNGSFN 251
Query: 243 EAFEWLEKMEKCGVCPDVVVFNVLIXXXXXXXXXXXXXXVLDMMVRKGFYPNVGSYQQVL 302
E+F + ++++ G+ P+ V ++ +L V K Y + S L
Sbjct: 252 ESFLYFRELQRAGMSPNEVSLTGVL-SACSQSGSFEFGKILHGFVEKAGYSWIVSVNNAL 310
Query: 303 YGLLD-AKRFIEALEVVEGMVSRGFVPSFVSFKQLVVGLCRHRRTEEVDWALRQMVRQGF 361
+ A V EGM + + VS+ ++ GL H + EE +M G
Sbjct: 311 IDMYSRCGNVPMARLVFEGMQEKRCI---VSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV 367
Query: 362 VP 363
P
Sbjct: 368 TP 369