Miyakogusa Predicted Gene
- Lj3g3v1015510.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1015510.1 Non Chatacterized Hit- tr|I1MJ12|I1MJ12_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11749
PE,78.62,0,UCH,Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2;
zf-MYND,Zinc finger, MYND-type; UCH_2_1,,CUFF.42031.1
(940 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 771 0.0
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 770 0.0
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 394 e-109
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 389 e-108
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 379 e-105
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 356 5e-98
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 348 1e-95
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 218 1e-56
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 218 2e-56
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 159 6e-39
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 158 2e-38
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 127 5e-29
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 125 2e-28
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 114 3e-25
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 107 3e-23
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 106 6e-23
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 106 6e-23
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 106 6e-23
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 103 8e-22
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 87 5e-17
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 82 2e-15
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 82 2e-15
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 80 6e-15
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 80 6e-15
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 79 1e-14
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 77 8e-14
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 76 1e-13
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 76 1e-13
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 75 2e-13
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 75 2e-13
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 75 2e-13
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 75 3e-13
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 74 4e-13
AT4G02220.1 | Symbols: | zinc finger (MYND type) family protein... 50 8e-06
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/1017 (45%), Positives = 563/1017 (55%), Gaps = 229/1017 (22%)
Query: 1 MLEPRESDIPXXXXXXXXXXXXXXXXXGKWSETAKKRNRITLLAQLASEEALKAEDMAVA 60
MLEPR +DIP GKWS ++KR R LLAQ+A+EEAL+AE + A
Sbjct: 1 MLEPRGADIPILFLVLVVLPVVAYILLGKWSNISEKRVRANLLAQMAAEEALRAETVVNA 60
Query: 61 DIIPQVSQVSS------------------------------------------------- 71
D + V++
Sbjct: 61 DRGVRFESVATENRAQRTRTKTVSAGGGAVRAEFDAGARETVAEQRSDSVTATCGVTVVA 120
Query: 72 --SKSELHECARCSAPARTRCSGCKSVRYCSGNCQIIHWRLIHKQECQQSEIHKSSSFPL 129
+ +ELH CARC PA+TRCS CKSVRYCSG CQIIHWR+ HK EC E SSS +
Sbjct: 121 PVNNNELHVCARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDECVPVESCSSSSERV 180
Query: 130 GLSVENFGYGSGFYDNLNNQLFSHNSRLTFRESAPLDNLVQPHIGTGDSATVDFSLFNNS 189
++ Y G +++ ++S+N+ Q G ++VDF+ S
Sbjct: 181 SFEKDSVLYDHG----MDSTMYSNNT-------------TQAAKGKTSKSSVDFASLGIS 223
Query: 190 Q-----------PSTFERRTSHKSNRETWRRDNGXXXXXXXXXXXXKATNSPSSSVVSKE 238
Q + ++ S K+NRE+ RRD+ N K
Sbjct: 224 QNDITPQINTQGRKSVGKQHSSKANRESCRRDSATVFDSSDEAASAGGDN--------KT 275
Query: 239 AFIRQKSRNNNDTMMEEETSKANPSGFGVYIYEQNALRSTIPEDDNYRNQYENAFVPG-- 296
+ I+ KSR N+ Y E N R ++ D + +FV G
Sbjct: 276 SHIKHKSRGNS------------------YAAETNPRRHSV--DSSAVQMNGQSFVSGMQ 315
Query: 297 NKYESPSNSCAANNNGCVDEFESDIATKGGNVVKGGNYHSDESAQYKCSSEMTIKGTPKT 356
++ +N ++ GC + T+ + + G ++S + C +E + KG
Sbjct: 316 ESHKHENNLGVRSSFGCPNTQYPSNGTRTATLPRTG---INKSGEQSC-TETSKKG---- 367
Query: 357 KKISHPPKAXXXXXXXXXXXXXXDLCCPNIEKKGRIADEPKVARTRDTFPLHGTNGAAST 416
++A K R++DT +NG +ST
Sbjct: 368 ----------------------------------QVAAVSKTVRSKDTGISEESNGISST 393
Query: 417 -GIMKMMGLGKSTKHSAVAFSEVNGVRYKKVKKIKMLFPYDEFVKIFQSEVFGICPRGLL 475
GIMKMMGL STKH + K +KMLFPY+EF+K FQ EVF + PRGL+
Sbjct: 394 MGIMKMMGLRNSTKHD------------DRYKNLKMLFPYEEFLKFFQCEVFDLSPRGLV 441
Query: 476 NCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGAPLS 535
NCGNSCYANAVLQ LT TKPL+ YLL RSHSR+C KDWCLMCELEQH+M+LRE+G PLS
Sbjct: 442 NCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPLS 501
Query: 536 PSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQETTFIQH 595
SRIL HMRSIN +GDGSQEDAHEFLRLLVASMQSICLE LGGE KVDPRLQETT +QH
Sbjct: 502 ASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQH 561
Query: 596 TFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRC 655
F GRL+SKVKCL CDHESERYENIMDLTLEI GWVESL+DALTQFT PEDLDGENMYRC
Sbjct: 562 MFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYRC 621
Query: 656 GRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMTGTGDIP 715
RC YVRARK+LSIHEAPNILTIVLKRFQEGRYGKINKCI+FPEMLDMIPFMT TGD+P
Sbjct: 622 SRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDVP 681
Query: 716 PLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYILFY 775
PLYMLYAVIVHLDTLNASFSGHYISYVKDL+GNW+RIDD+E+ PV + QVMS+GAY+LFY
Sbjct: 682 PLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLFY 741
Query: 776 MRSCPRPPV-EQTRKAVQQSVSDSSKHYPLEVQTPCKPGHSRHGSQGSLPQPLPVARPEI 834
MRS PRP E KA P H Q PV R
Sbjct: 742 MRSYPRPQRGEHNGKA---------------------PVHHSQPRNEMKEQRKPVNR--- 777
Query: 835 ATSLIDTSNGFLTSNTNRNIHPVTQTYAEKVRHEFSDATSSDWSLFTSSDEASFTTESTR 894
+ + H+ ++++SS+WSLFTSSDEASFTTESTR
Sbjct: 778 --------------------------FKPRADHKNTESSSSEWSLFTSSDEASFTTESTR 811
Query: 895 DSFSTVDYGDNMDPIS-----AIFNY-------TPENSLM--KFSHSRPLTRFIPEK 937
DSFST+DY D + AIFN +P N++ FS ++P TR+ E+
Sbjct: 812 DSFSTIDYTDVCHVVDSSSPFAIFNNVYHNVEPSPHNTVACRMFSGTKPETRYFVEQ 868
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/1018 (45%), Positives = 565/1018 (55%), Gaps = 227/1018 (22%)
Query: 1 MLEPRESDIPXXXXXXXXXXXXXXXXXGKWSETAKKRNRITLLAQLASEEALKAEDMAVA 60
MLEPR +DIP GKWS ++KR R LLAQ+A+EEAL+AE + A
Sbjct: 1 MLEPRGADIPILFLVLVVLPVVAYILLGKWSNISEKRVRANLLAQMAAEEALRAETVVNA 60
Query: 61 DIIPQVSQVSS------------------------------------------------- 71
D + V++
Sbjct: 61 DRGVRFESVATENRAQRTRTKTVSAGGGAVRAEFDAGARETVAEQRSDSVTATCGVTVVA 120
Query: 72 --SKSELHECARCSAPARTRCSGCKSVRYCSGNCQIIHWRLIHKQECQQSEIHKSSSFPL 129
+ +ELH CARC PA+TRCS CKSVRYCSG CQIIHWR+ HK EC E SSS +
Sbjct: 121 PVNNNELHVCARCFGPAKTRCSRCKSVRYCSGKCQIIHWRVAHKDECVPVESCSSSSERV 180
Query: 130 GLSVENFGYGSGFYDNLNNQLFSHNSRLTFRESAPLDNLVQPHIGTGDSATVDFSLFNNS 189
++ Y G +++ ++S+N+ Q G ++VDF+ S
Sbjct: 181 SFEKDSVLYDHG----MDSTMYSNNT-------------TQAAKGKTSKSSVDFASLGIS 223
Query: 190 Q-----------PSTFERRTSHKSNRETWRRDNGXXXXXXXXXXXXKATNSPSSSVVSKE 238
Q + ++ S K+NRE+ RRD+ N K
Sbjct: 224 QNDITPQINTQGRKSVGKQHSSKANRESCRRDSATVFDSSDEAASAGGDN--------KT 275
Query: 239 AFIRQKSRNNNDTMMEEETSKANPSGFGVYIYEQNALRSTIPEDDNYRNQYENAFVPGNK 298
+ I+ KSR N+ Y E N R ++ D + +FV G +
Sbjct: 276 SHIKHKSRGNS------------------YAAETNPRRHSV--DSSAVQMNGQSFVSGMQ 315
Query: 299 --YESPSNSCAANNNGCVDEFESDIATKGGNVVKGGNYHSDESAQYKCSSEMTIKGTPKT 356
++ +N ++ GC + T+ + + G ++S + C +E + KG
Sbjct: 316 ESHKHENNLGVRSSFGCPNTQYPSNGTRTATLPRTG---INKSGEQSC-TETSKKG---- 367
Query: 357 KKISHPPKAXXXXXXXXXXXXXXDLCCPNIEKKGRIADEPKVARTRDTFPLHGTNGAAST 416
++A K R++DT +NG +ST
Sbjct: 368 ----------------------------------QVAAVSKTVRSKDTGISEESNGISST 393
Query: 417 -GIMKMMGLGKSTKHSAVAFSEVNGVRYKKVKKIK-MLFPYDEFVKIFQSEVFGICPRGL 474
GIMKMMGL STKH RYK +K MLFPY+EF+K FQ EVF + PRGL
Sbjct: 394 MGIMKMMGLRNSTKHDD---------RYKNLKVSSLMLFPYEEFLKFFQCEVFDLSPRGL 444
Query: 475 LNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGAPL 534
+NCGNSCYANAVLQ LT TKPL+ YLL RSHSR+C KDWCLMCELEQH+M+LRE+G PL
Sbjct: 445 VNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHVMMLRESGGPL 504
Query: 535 SPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQETTFIQ 594
S SRIL HMRSIN +GDGSQEDAHEFLRLLVASMQSICLE LGGE KVDPRLQETT +Q
Sbjct: 505 SASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQETTLVQ 564
Query: 595 HTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYR 654
H F GRL+SKVKCL CDHESERYENIMDLTLEI GWVESL+DALTQFT PEDLDGENMYR
Sbjct: 565 HMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLDGENMYR 624
Query: 655 CGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMTGTGDI 714
C RC YVRARK+LSIHEAPNILTIVLKRFQEGRYGKINKCI+FPEMLDMIPFMT TGD+
Sbjct: 625 CSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFMTRTGDV 684
Query: 715 PPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYILF 774
PPLYMLYAVIVHLDTLNASFSGHYISYVKDL+GNW+RIDD+E+ PV + QVMS+GAY+LF
Sbjct: 685 PPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSEGAYMLF 744
Query: 775 YMRSCPRPPV-EQTRKAVQQSVSDSSKHYPLEVQTPCKPGHSRHGSQGSLPQPLPVARPE 833
YMRS PRP E KA P H Q PV R
Sbjct: 745 YMRSYPRPQRGEHNGKA---------------------PVHHSQPRNEMKEQRKPVNR-- 781
Query: 834 IATSLIDTSNGFLTSNTNRNIHPVTQTYAEKVRHEFSDATSSDWSLFTSSDEASFTTEST 893
+ + H+ ++++SS+WSLFTSSDEASFTTEST
Sbjct: 782 ---------------------------FKPRADHKNTESSSSEWSLFTSSDEASFTTEST 814
Query: 894 RDSFSTVDYGDNMDPIS-----AIFNY-------TPENSLM--KFSHSRPLTRFIPEK 937
RDSFST+DY D + AIFN +P N++ FS ++P TR+ E+
Sbjct: 815 RDSFSTIDYTDVCHVVDSSSPFAIFNNVYHNVEPSPHNTVACRMFSGTKPETRYFVEQ 872
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 394 bits (1011), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/378 (49%), Positives = 253/378 (66%)
Query: 421 MMGLGKSTKHSAVAFSEVNGVRYKKVKKIKMLFPYDEFVKIFQSEVFGICPRGLLNCGNS 480
+ G ++K + +A +K +LFPY+ FV+ + + + P GL NCGNS
Sbjct: 123 LFGNRSASKKTRIALVPQQSQSKATLKPTDVLFPYESFVRYYNWDRPIMAPCGLTNCGNS 182
Query: 481 CYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGAPLSPSRIL 540
C+AN VLQCL+ T+PL+ YLL R H R C DWC +CE E H+ + P SP I+
Sbjct: 183 CFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRANYSRFPFSPMNII 242
Query: 541 WHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQETTFIQHTFSGR 600
+ +I ++G G QEDAHE +R + MQS+CL+ GGEK V PR QETT IQ+ F G
Sbjct: 243 SRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQYIFGGL 302
Query: 601 LQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCTA 660
LQS+V+C C + S++YEN+MDLT+EI G SLE+ L QFT+ E L G+N+Y+C RC
Sbjct: 303 LQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDD 362
Query: 661 YVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYML 720
YV+A K+LSI APNILTI LKRFQ GR+GK+NK I+FPE D+ P+M+G G+ +Y L
Sbjct: 363 YVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGSDVYKL 422
Query: 721 YAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYILFYMRSCP 780
YAVIVHLD LNASF GHYI YVKD +GNW+RIDD+EV+ V++ V+S AY+L Y R P
Sbjct: 423 YAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLYSRVQP 482
Query: 781 RPPVEQTRKAVQQSVSDS 798
RP ++ ++ + +D+
Sbjct: 483 RPSNLRSEESQDEKKTDT 500
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 245/351 (69%), Gaps = 7/351 (1%)
Query: 446 VKKIKMLFPYDEFVKIFQSEVFGICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSH 505
+K ++LFPY+EFV+ F + + P GL+NCGNSC+AN +LQCL+ T+PL+ YLL + H
Sbjct: 142 LKPREVLFPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGH 201
Query: 506 SRACCAKDWCLMCELEQHIMILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLL 565
R C DWC +CE + H+ ++ P SP I+ + +I +G G QEDAHEF+R
Sbjct: 202 KRECMRNDWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYA 261
Query: 566 VASMQSICLEGLGGEKKVDPRLQETTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTL 625
+ MQS+CL+ GGEK V PR QETT IQ+ F G LQS+V+C C+H S++YEN+MDL +
Sbjct: 262 IDMMQSVCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIV 321
Query: 626 EILGWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQ 685
E+ G SLE+ L QFT+ E L G+NMY+C RC+ YV+A K+L+I APNILTI LKR+Q
Sbjct: 322 EMHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ 381
Query: 686 EGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDL 745
GRYGK+NK I+FPE LD+ P+M+ GD +Y LYAVIVHLD LNASF GHYI Y+KD
Sbjct: 382 GGRYGKLNKRISFPETLDLNPYMSEGGDGSDVYKLYAVIVHLDMLNASFFGHYICYIKDF 441
Query: 746 QGNWFRIDDTEVQPVQINQVMSDGAYILFYMR-------SCPRPPVEQTRK 789
GNW+RIDD+E++ V++ V+S AY+L Y R SC R V+ +K
Sbjct: 442 CGNWYRIDDSEIESVELEDVLSQRAYMLLYSRIQARSSSSCLRSEVKDEKK 492
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 232/330 (70%)
Query: 469 ICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILR 528
+ P GL NCGNSC+AN VLQCL+ T+PL+ YLL R H R C DWC +CE E H+
Sbjct: 1 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLDRAN 60
Query: 529 ENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQ 588
+ P SP I+ + +I ++G G QEDAHE +R + MQS+CL+ GGEK V PR Q
Sbjct: 61 YSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQ 120
Query: 589 ETTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLD 648
ETT IQ+ F G LQS+V+C C + S++YEN+MDLT+EI G SLE+ L QFT+ E L
Sbjct: 121 ETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQ 180
Query: 649 GENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFM 708
G+N+Y+C RC YV+A K+LSI APNILTI LKRFQ GR+GK+NK I+FPE D+ P+M
Sbjct: 181 GDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYM 240
Query: 709 TGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSD 768
+G G+ +Y LYAVIVHLD LNASF GHYI YVKD +GNW+RIDD+EV+ V++ V+S
Sbjct: 241 SGGGEGSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQ 300
Query: 769 GAYILFYMRSCPRPPVEQTRKAVQQSVSDS 798
AY+L Y R PRP ++ ++ + +D+
Sbjct: 301 RAYMLLYSRVQPRPSNLRSEESQDEKKTDT 330
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 356 bits (913), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 175/335 (52%), Positives = 231/335 (68%), Gaps = 7/335 (2%)
Query: 450 KMLFPYDEFVKIFQSEVFGICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRAC 509
+M F Y+ FVK++ V + P GL+N GNSCYANAVLQCL T+PL+ YL+ HS+ C
Sbjct: 308 EMSFSYELFVKLYCDRV-ELQPFGLVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTC 366
Query: 510 CAKDWCLMCELEQHIMILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASM 569
K WC +CE E I+ R +PLSP +IL ++ I H+G G +EDAHEFLR V +M
Sbjct: 367 RKKSWCFVCEFEHLILKARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTM 426
Query: 570 QSICLEGLGGEKKVDPRLQETTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILG 629
QS+ L+ P +ETT + TF G L SK+KC+ C H+SER E +MDLT+EI G
Sbjct: 427 QSVFLKEAPA---AGPFAEETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDG 483
Query: 630 WVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY 689
+ SLE+AL QFT+ E LDGEN Y CGRC +Y +A+K+L I E PNILT+VLKRFQ +
Sbjct: 484 DIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNF 543
Query: 690 GKINKCITFPEMLDMIPFMT--GTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQG 747
GK++K I FPE+LD+ P+M+ GD P+Y LYAV+VHLD ++ FSGHY+ Y+K L G
Sbjct: 544 GKLSKPIHFPELLDISPYMSDPNHGD-HPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDG 602
Query: 748 NWFRIDDTEVQPVQINQVMSDGAYILFYMRSCPRP 782
+WF+IDD+ V PVQ+ V+ +GAY+L Y R PRP
Sbjct: 603 DWFKIDDSNVFPVQLETVLLEGAYMLLYARDSPRP 637
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 18/183 (9%)
Query: 29 KWSETAKKRNRITLLAQLASEEALKAEDMAVADIIPQVSQVSSSKSELHECARCSAPART 88
+W + +R + L LA+EE+ AE++ A V S S+++ CA C P T
Sbjct: 11 QWRSASVRREEVIRLIALATEESYLAEEVRPA----TVDYGGDSVSDVYRCAVCLYPTTT 66
Query: 89 RCSGCKSVRYCSGNCQIIHWRLIHKQEC------QQSEIHKSSSFPLGLSVENFGYGSGF 142
RCS CKSVRYCS CQI+HWR HK+EC ++ E + S + S +F
Sbjct: 67 RCSQCKSVRYCSSKCQILHWRRGHKEECRSPDYDEEKEEYVQSDYDAKESNVDFPSRGTA 126
Query: 143 YDNLNNQLFSHNSRLTFRESAPLDNLVQPHIGTGDSATVDFSLFNNSQPSTFERR-TSHK 201
Y++ +N S + S P + VQP S VDF+ N + + +E R S K
Sbjct: 127 YESSSN--VSVDVACDMSTSRPSIHKVQPR-----SEAVDFTTSLNIKDNLYETRPLSRK 179
Query: 202 SNR 204
+R
Sbjct: 180 KSR 182
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 348 bits (892), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 159/334 (47%), Positives = 227/334 (67%), Gaps = 2/334 (0%)
Query: 450 KMLFPYDEFVKIFQSEVFGICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRAC 509
K LFPY+ F K++ ++ P GL+N GNSC+AN V QCL T PL Y L + HSRAC
Sbjct: 521 KGLFPYEVFAKLYTYKI-EFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSRAC 579
Query: 510 CAKDWCLMCELEQHIMILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASM 569
K+ C C E+ ++ +E +PLSP+ +L +++I +G+G +EDAHEFLR +V +M
Sbjct: 580 TKKEQCFTCGFEKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTM 639
Query: 570 QSICLEGLGGEKKVDPRLQETTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILG 629
QS+C++ + +L++TT I TF G L+SK+KC+ C +SE E +MDLT+EI G
Sbjct: 640 QSVCIKASEYDMTKSSKLEDTTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVEIDG 699
Query: 630 WVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY 689
+ +L+DAL +FT E LDGEN YRCG C +Y RA+K+L I E PN+LTI LKRFQ G++
Sbjct: 700 DISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQAGKF 759
Query: 690 GKINKCITFPEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNW 749
GK+NK I FPE LD+ P+++G + Y LY VIVHLD +NA+FSGHY+ Y+++ Q W
Sbjct: 760 GKLNKLIRFPETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCYIRN-QNKW 818
Query: 750 FRIDDTEVQPVQINQVMSDGAYILFYMRSCPRPP 783
++ DD+ V + ++++ GAY+LFY R P PP
Sbjct: 819 YKADDSTVVTSDVERILTKGAYMLFYARCTPTPP 852
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 33/52 (63%)
Query: 70 SSSKSELHECARCSAPARTRCSGCKSVRYCSGNCQIIHWRLIHKQECQQSEI 121
S + S + C C A TRCS CK+VRYCSG CQIIHWR HK EC + I
Sbjct: 65 SVAVSNVFHCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDECHPASI 116
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/325 (40%), Positives = 182/325 (56%), Gaps = 11/325 (3%)
Query: 471 PRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCA------KDWCLMCELEQHI 524
P GL N GN+CY N+VLQCLT T PL + L HS C K C C +E+ I
Sbjct: 23 PLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRI 82
Query: 525 M-ILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKV 583
L + +P++I ++ H G QEDAHEFLR ++ + + L
Sbjct: 83 ARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNG 142
Query: 584 DPRLQETTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTS 643
+ + ++ F G LQS+VKCL+C ES + + IMD++LEIL S++++L +F
Sbjct: 143 NEPFNGNSVVKEIFGGALQSQVKCLSCGAESNKADEIMDISLEIL-QSSSVKESLQKFFQ 201
Query: 644 PEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLD 703
E LDG N YRC C V ARKQ+SI +APNIL I LKRF GKI+K I+F E+L
Sbjct: 202 SEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILV 261
Query: 704 MIPFMTGTGDIP-PLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQI 762
+ FM+ P P Y L+ +IVH + + SGHY +YVKD G W+ +D+ V +
Sbjct: 262 LSNFMSKASKDPQPEYKLFGIIVH--SGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTL 319
Query: 763 NQVMSDGAYILFYMRSCPRPPVEQT 787
+V+S+ AYILF+ RS RP +T
Sbjct: 320 QEVLSEKAYILFFSRSNQRPASAKT 344
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/308 (37%), Positives = 182/308 (59%), Gaps = 9/308 (2%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRE-NG 531
GL N GN+C+ N+VLQCLT T+PL L +H + C +C +C +++H+ R+ NG
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQANG 167
Query: 532 APLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICL-EGLGGEKKVDPRLQET 590
L+P ++ ++R I+ + + QEDAHE++ L+ M L G+ E R
Sbjct: 168 RILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGVPSESSDAYR---R 224
Query: 591 TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLD-G 649
+ + F G L+S+VKC C H S +++ +DL+L+I +SL+ AL++FT+ E LD G
Sbjct: 225 SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDI-SKADSLQRALSRFTAVELLDNG 283
Query: 650 ENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFMT 709
+Y+C RC V+A+KQL++ +AP +LT+ LKRF+ R KI++ + F +DM PF++
Sbjct: 284 AKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFVS 343
Query: 710 GTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDG 769
G + Y LY V+VH +S SGHY +V+ G W+ +DD V V V +
Sbjct: 344 GPHEGNLKYTLYGVLVHYG--RSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQK 401
Query: 770 AYILFYMR 777
AY+LFY+R
Sbjct: 402 AYMLFYVR 409
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 173/346 (50%), Gaps = 23/346 (6%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRAC-CAKDW-CLMCELEQHI-MILRE 529
GL N GNSC+ N+V QC T T PL+ LL + C C ++ C++ + HI LR
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALRP 236
Query: 530 NGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQE 589
P++P ++ + QEDAHEFL+ + ++ IC G + R
Sbjct: 237 ERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-IC-----GSDRTSFRGDI 290
Query: 590 TTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDG 649
T+ Q FSGRL S ++C NCD+ SE YE + L+LEI V++L AL FT E LD
Sbjct: 291 TS--QDVFSGRLISGLRCCNCDYVSETYEKSVGLSLEIED-VDTLGSALESFTRVEKLDE 347
Query: 650 ENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQE-GRY-GKINKCITFPEMLDMIPF 707
+ C C V KQL + + P + T LKRF+ G Y KI K + P +D+ P+
Sbjct: 348 Q--LTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPY 405
Query: 708 MTGT--GDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQV 765
M ++ Y LYA++ H A GHY SYV+ W DD++V + + V
Sbjct: 406 MRNIQENEVSTKYHLYALVEHFGYSVAY--GHYSSYVRSAPKIWHHFDDSKVTRIDEDMV 463
Query: 766 MSDGAYILFYMRSCPR---PPVEQTRKAVQQSVSDSSKHYPLEVQT 808
+S +YILFY R R E+ + V+ S+ +SS L+ T
Sbjct: 464 LSQDSYILFYAREGTRWFSSVYEEMQPLVEASLLNSSPKSVLDSST 509
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 158 bits (400), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/312 (34%), Positives = 154/312 (49%), Gaps = 14/312 (4%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRAC-CAKD-WCLMCELEQHI-MILRE 529
GL N GN+C+ +VLQC T T PL+ L + C C + +C+M L HI + LR
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 530 NGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQE 589
+G ++ R ++ +S QEDAHEFL+ + ++ CL+ V Q+
Sbjct: 224 SGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKNQLGSVSS--QD 281
Query: 590 TTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDG 649
+ + F G L S + C NC+ S +E + +LEI V +L AL FT E L
Sbjct: 282 LNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIED-VNTLWKALESFTCVEKL-- 338
Query: 650 ENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEG--RYGKINKCITFPEMLDMIPF 707
E+ C C V KQL + P + T LKRF KI I FP LD+ PF
Sbjct: 339 EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPF 398
Query: 708 MTGTGD--IPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQV 765
M+ D + Y LYA + H+ + A+F GHY SYV+ W DD++V + +V
Sbjct: 399 MSSNHDPEVSTRYHLYAFVEHIG-IRATF-GHYSSYVRSAPETWHNFDDSKVTRISEERV 456
Query: 766 MSDGAYILFYMR 777
+S AYILFY R
Sbjct: 457 LSRPAYILFYAR 468
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 127 bits (318), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 157/351 (44%), Gaps = 58/351 (16%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLL--YRSHSRACCAKDWCLMC--ELEQHIMILR 528
G N GN+CY N+VLQ L P LL Y S+ A++ + C +L I +
Sbjct: 24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQK 83
Query: 529 ENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQ 588
+ ++P R + ++ N +DAHEFL L+ + I L E K
Sbjct: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDI----LEKEAKATKTEH 139
Query: 589 ET----------------------------TFIQHTFSGRLQSKVKCLNCDHESERYENI 620
ET T++ + F G L ++ +CL C+ + R E
Sbjct: 140 ETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETF 199
Query: 621 MDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIV 680
+DL+L+I S+ L F+S E L E+ + C +C + A+K++ I + P+IL I
Sbjct: 200 LDLSLDI-EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIH 258
Query: 681 LKRF----QEGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSG 736
LKRF Q GRY K++ + FP L + + D+ Y L+AV+VH+ + G
Sbjct: 259 LKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVE--YSLFAVVVHVGS--GPNHG 314
Query: 737 HYISYVKDLQGNWFRIDDTEVQPVQINQVM------------SDGAYILFY 775
HY+S VK +W DD V+ ++ + V +D YILFY
Sbjct: 315 HYVSLVKS-HNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGYILFY 364
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 153/343 (44%), Gaps = 47/343 (13%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMC--ELEQHIMILREN 530
G N GN+CY N+VLQ L P LL + A++ L C +L I ++
Sbjct: 24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTCLADLFSQISSQKKK 83
Query: 531 GAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQET 590
++P R + ++ N +DAHEFL L+ + I LE K D +
Sbjct: 84 TGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEI-LEKETQATKADNETSSS 142
Query: 591 ----------------------TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEIL 628
T++ F G L ++ +CL C+ + R E +DL+L+I
Sbjct: 143 PEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI- 201
Query: 629 GWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRF---- 684
S+ L F+S E L E+ + C +C + A+K++ I + P+IL I LKRF
Sbjct: 202 EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 261
Query: 685 QEGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKD 744
Q GRY K++ + FP L + + DI Y L+AV+VH+ + GHY+S VK
Sbjct: 262 QLGRYKKLSYRVVFPLELKLSNTVDEYVDIE--YSLFAVVVHVGS--GPNHGHYVSLVKS 317
Query: 745 LQGNWFRIDDTEVQPVQINQVM------------SDGAYILFY 775
+W DD V+ ++ + V +D YIL Y
Sbjct: 318 -HNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLY 359
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 153/357 (42%), Gaps = 61/357 (17%)
Query: 473 GLLNCGNSCYANAVLQ--------------CLTSTKPLLIYLLYRSHSRACCAKDWCLMC 518
G N GN+CY N+VLQ L P LL + A++ L C
Sbjct: 24 GFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAPFREQLLEHYANNKADAEENLLTC 83
Query: 519 --ELEQHIMILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEG 576
+L I ++ ++P R + ++ N +DAHEFL L+ + I LE
Sbjct: 84 LADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVEI-LEK 142
Query: 577 LGGEKKVDPRLQET----------------------TFIQHTFSGRLQSKVKCLNCDHES 614
K D + T++ F G L ++ +CL C+ +
Sbjct: 143 ETQATKADNETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVT 202
Query: 615 ERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAP 674
R E +DL+L+I S+ L F+S E L E+ + C +C + A+K++ I + P
Sbjct: 203 ARDETFLDLSLDI-EQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPP 261
Query: 675 NILTIVLKRF----QEGRYGKINKCITFPEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTL 730
+IL I LKRF Q GRY K++ + FP L + + DI Y L+AV+VH+ +
Sbjct: 262 HILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIE--YSLFAVVVHVGS- 318
Query: 731 NASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVM------------SDGAYILFY 775
GHY+S VK +W DD V+ ++ + V +D YIL Y
Sbjct: 319 -GPNHGHYVSLVKS-HNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLY 373
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 188/450 (41%), Gaps = 84/450 (18%)
Query: 420 KMMGLGKSTKHSAVAFSEVNGVRYKKVKKIK---------MLFPYDEFVKIFQSEVFGIC 470
++ GLG S K A +V VR K +++ ++ P D K F +
Sbjct: 124 QLFGLGMSVKSGA----DVVAVRSNKKRRLDSQLIIGSNFLVSPRDRREKW----TFPLG 175
Query: 471 PRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKD----WCLMCELEQHI-M 525
RGL N G++C+ NAVLQ L PL + L H+R C + CL C+L+
Sbjct: 176 LRGLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSA 235
Query: 526 ILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDP 585
+ + P SP+ +L+ ++++ Q+D+HEF L+ + E G K +
Sbjct: 236 MFSGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIH----ENEGKSKCLYQ 291
Query: 586 RLQETTFIQH-TFSGRLQSKVKCLNCDHESERYENIMDLTL------------------- 625
+E I H FSG L+S V C C S Y+ +D++L
Sbjct: 292 DNEECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYS 351
Query: 626 ---EILGWVESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLK 682
+ + +L L FT E L + C C + KQ+SI P +L + +K
Sbjct: 352 GGPSVNAIMPTLSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVK 411
Query: 683 RFQEGRYGK----INKCITFPEMLDMIPFMT----------------GTGDIPPL----- 717
RF+ K I+ + +P L+M P+++ G G+
Sbjct: 412 RFEHSLTRKTSRKIDSYLQYPFRLNMSPYLSSSIIGKRFGNRIFAFDGEGEYDSSSSSSP 471
Query: 718 ---YMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYILF 774
+ ++AV+ H L SGHY++Y++ L+G W+R DD + V+ V Y+LF
Sbjct: 472 SAEFEIFAVVTHKGMLE---SGHYVTYLR-LKGLWYRCDDAWINEVEEEVVRGCECYMLF 527
Query: 775 YMRSCPRPPVEQTRKAVQQSVSDSSKHYPL 804
Y + +++ K + V + +P
Sbjct: 528 YAQE---TVIQKAHKELSYQVISMADAFPF 554
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 150/363 (41%), Gaps = 58/363 (15%)
Query: 466 VFGICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHI- 524
V PRGL+N GN C+ NA LQ L S P + LL + + D + + I
Sbjct: 191 VKDFTPRGLINAGNLCFLNATLQALLSCSPF-VQLLQKIQLQDIPKADSPTLAAFSEFIS 249
Query: 525 -------------MILRENGAPLSPSRILWHMRS-----INSHMGDGSQEDAHEFLRLLV 566
+ + E G P P+ +R+ +N+ G QEDA EFL ++
Sbjct: 250 ELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIM 309
Query: 567 ASMQSICLE--------------------GLGGE-KKVDPR-----LQETTFI----QHT 596
M L+ G E + V P+ + +F+
Sbjct: 310 DQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEI 369
Query: 597 FSGRLQSKVKCLNCDHESERYENIMDLTLEIL-GWVESLEDALTQFTSPEDLDGENMYRC 655
F G+L+S VK S + + L L+I V+ +EDAL F++ EDL+G
Sbjct: 370 FGGQLKSVVKAKGT-KASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVT 428
Query: 656 GRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEMLDM-IPFMTGTG 712
G+ T V A K + I + I+ + L RF G G K+ K + FP L++ +
Sbjct: 429 GK-TGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLS 487
Query: 713 DIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYI 772
+ Y L A I H + S GHY + + G W R DD V P+ V+ D AY+
Sbjct: 488 NESLRYELVATITH-HGWDPS-KGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYV 545
Query: 773 LFY 775
LFY
Sbjct: 546 LFY 548
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 150/363 (41%), Gaps = 58/363 (15%)
Query: 466 VFGICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHI- 524
V PRGL+N GN C+ NA LQ L S P + LL + + D + + I
Sbjct: 191 VKDFTPRGLINAGNLCFLNATLQALLSCSPF-VQLLQKIQLQDIPKADSPTLAAFSEFIS 249
Query: 525 -------------MILRENGAPLSPSRILWHMRS-----INSHMGDGSQEDAHEFLRLLV 566
+ + E G P P+ +R+ +N+ G QEDA EFL ++
Sbjct: 250 ELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIM 309
Query: 567 ASMQSICLE--------------------GLGGE-KKVDPR-----LQETTFI----QHT 596
M L+ G E + V P+ + +F+
Sbjct: 310 DQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEI 369
Query: 597 FSGRLQSKVKCLNCDHESERYENIMDLTLEIL-GWVESLEDALTQFTSPEDLDGENMYRC 655
F G+L+S VK S + + L L+I V+ +EDAL F++ EDL+G
Sbjct: 370 FGGQLKSVVKAKGT-KASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVT 428
Query: 656 GRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEMLDM-IPFMTGTG 712
G+ T V A K + I + I+ + L RF G G K+ K + FP L++ +
Sbjct: 429 GK-TGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLS 487
Query: 713 DIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYI 772
+ Y L A I H + S GHY + + G W R DD V P+ V+ D AY+
Sbjct: 488 NESLRYELVATITH-HGWDPS-KGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYV 545
Query: 773 LFY 775
LFY
Sbjct: 546 LFY 548
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 150/363 (41%), Gaps = 58/363 (15%)
Query: 466 VFGICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHI- 524
V PRGL+N GN C+ NA LQ L S P + LL + + D + + I
Sbjct: 191 VKDFTPRGLINAGNLCFLNATLQALLSCSPF-VQLLQKIQLQDIPKADSPTLAAFSEFIS 249
Query: 525 -------------MILRENGAPLSPSRILWHMRS-----INSHMGDGSQEDAHEFLRLLV 566
+ + E G P P+ +R+ +N+ G QEDA EFL ++
Sbjct: 250 ELDVPSSSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIM 309
Query: 567 ASMQSICLE--------------------GLGGE-KKVDPR-----LQETTFI----QHT 596
M L+ G E + V P+ + +F+
Sbjct: 310 DQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEI 369
Query: 597 FSGRLQSKVKCLNCDHESERYENIMDLTLEIL-GWVESLEDALTQFTSPEDLDGENMYRC 655
F G+L+S VK S + + L L+I V+ +EDAL F++ EDL+G
Sbjct: 370 FGGQLKSVVKAKGT-KASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVT 428
Query: 656 GRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEMLDM-IPFMTGTG 712
G+ T V A K + I + I+ + L RF G G K+ K + FP L++ +
Sbjct: 429 GK-TGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLS 487
Query: 713 DIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGNWFRIDDTEVQPVQINQVMSDGAYI 772
+ Y L A I H + S GHY + + G W R DD V P+ V+ D AY+
Sbjct: 488 NESLRYELVATITH-HGWDPS-KGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYV 545
Query: 773 LFY 775
LFY
Sbjct: 546 LFY 548
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 103 bits (256), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 183/427 (42%), Gaps = 68/427 (15%)
Query: 471 PRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILREN 530
P GL N G +CYAN++LQCL + +R + +E H+ L++N
Sbjct: 105 PAGLTNLGATCYANSILQCL------YMNTAFREG-----------VFSVEVHV--LKQN 145
Query: 531 GAPLSPSRILWHMRS-----INS-------HMGDGSQEDAHEFLRLLVASMQSICLEGLG 578
+R+ + + ++S + +G Q+D HEFL LL++ ++
Sbjct: 146 PVLDQIARLFAQLHASQKSFVDSDAFVKTLELDNGVQQDTHEFLTLLLSLLER------- 198
Query: 579 GEKKVDPRLQETTFIQHTFSGRLQSKVKCLNCDHESE---RYENIMDLTLEILGWVESLE 635
+ ++ T +Q FSG + C C +SE + E+ L L + G ++SL+
Sbjct: 199 --CLLHSGVKAKTIVQDLFSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKG-LKSLD 255
Query: 636 DALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRF----QEGRYGK 691
+L + S E L+G+N Y CG C A V A + + + P ++T LKR + K
Sbjct: 256 ASLNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRCIFLPKTTAKKK 315
Query: 692 INKCITFPEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQ-GNWF 750
I +FP++LDM + + Y L AV++H + A SGHY++++KD + G W+
Sbjct: 316 ITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGS--AVNSGHYVAHIKDEKTGLWW 373
Query: 751 RIDDTEVQPV----------QINQVMSDGAYILFYMRSCPRPPVEQTRKAVQQSVSDSSK 800
DD V + Q S+G + + R A++ V SS
Sbjct: 374 EFDDEHVSELGKRPCNEASSSTPQSESNGTASSGNITDGIQSGSSDCRSAIKSEVFSSSD 433
Query: 801 HYPLEVQTPCKPGHSRHGSQGSLPQPLPVARPEIATSLIDTSNGFLTSNTNRNIHPVTQT 860
Y L C ++ G + P+ + + E+ G+L + + I+ +
Sbjct: 434 AYMLMYSLRCDKQENQEGQK---ENPIDITKGEVK----QLKGGYLPKHLSEWINNMNAV 486
Query: 861 YAEKVRH 867
+ E +
Sbjct: 487 FLESCKQ 493
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 22/161 (13%)
Query: 631 VESLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQE---G 687
+ S +++ ++ T ED D E + R A K++ I++AP +LTI LKRF + G
Sbjct: 804 IHSADESESKGTQDEDEDSEKVITVKR-----DATKKVLINKAPPVLTIHLKRFSQDLRG 858
Query: 688 RYGKINKCITFPEMLDMIPFMTG--TGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDL 745
R K+N + F E++D+ +M +G+ PP+Y L ++ H T+ GHY++YV+
Sbjct: 859 RLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSGTMRG---GHYVAYVRGG 915
Query: 746 Q---------GNWFRIDDTEVQPVQINQVMSDGAYILFYMR 777
Q W+ + D V+ V + +V+ AYILFY R
Sbjct: 916 QRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYER 956
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY--G 690
SL L F + E L ++M+ C C + +A K+L + + P+IL LKRF RY
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 691 KINKCITFP-EMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGN- 748
KI+ + FP LD+ ++ D LY LYAV H L HY +Y K + N
Sbjct: 808 KIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG---HYTAYAKLIDDNE 864
Query: 749 WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ V V +++ + AY+LFY R
Sbjct: 865 WYHFDDSHVSSVNESEIKNSAAYVLFYRR 893
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY--G 690
SL L F + E L ++M+ C C + +A K+L + + P+IL LKRF RY
Sbjct: 748 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 807
Query: 691 KINKCITFP-EMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGN- 748
KI+ + FP LD+ ++ D LY LYAV H L HY +Y K + N
Sbjct: 808 KIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGGG---HYTAYAKLIDDNE 864
Query: 749 WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ V V +++ + AY+LFY R
Sbjct: 865 WYHFDDSHVSSVNESEIKNSAAYVLFYRR 893
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY--G 690
SL L F + E L ++M+ C C + +A K+L + P IL I LKRF R+
Sbjct: 765 SLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKN 824
Query: 691 KINKCITFP-EMLDMIPFMT-GTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGN 748
K+ + FP + LD+ +++ G YMLYA+ H ++ GHY +YV
Sbjct: 825 KLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHGGDR 881
Query: 749 WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ V + ++ + AY+LFY R
Sbjct: 882 WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY--G 690
SL L F + E L ++M+ C C + +A K+L + P IL I LKRF R+
Sbjct: 765 SLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSRFMKN 824
Query: 691 KINKCITFP-EMLDMIPFMT-GTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGN 748
K+ + FP + LD+ +++ G YMLYA+ H ++ GHY +YV
Sbjct: 825 KLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHGGDR 881
Query: 749 WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ V + ++ + AY+LFY R
Sbjct: 882 WYDFDDSHVHQISQEKIKTSAAYVLFYKR 910
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 7/149 (4%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY--G 690
SL L F + E L ++M+ C C + +A K+L + + P+IL LKRF RY
Sbjct: 749 SLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYLKN 808
Query: 691 KINKCITFP-EMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGN- 748
KI+ + FP LD+ ++ LY LYAV H GHY +Y K + N
Sbjct: 809 KIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNH---YGGLGGGHYTAYAKLIDDNK 865
Query: 749 WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ V V +++ + AY+LFY R
Sbjct: 866 WYHFDDSHVSSVNESEIRNSAAYVLFYRR 894
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1 |
chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 21/132 (15%)
Query: 664 ARKQLSIHEAPNILTIVLKRFQE---GRYGKINKCITFPEMLDMIPFMTG--TGDIPPLY 718
ARK++ I++AP +LTI LKRF + GR K++ + F E +D+ +M + + P+Y
Sbjct: 954 ARKKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVY 1013
Query: 719 MLYAVIVHLDTLNASFSGHYISYVKDLQGN-------------WFRIDDTEVQPVQINQV 765
L ++ HL ++ GHY+SY++ W+ D++V+P + +V
Sbjct: 1014 RLAGLVEHLGAMS---RGHYVSYIRGGHKERRDSDTKEPNSSIWYHASDSQVRPASLEEV 1070
Query: 766 MSDGAYILFYMR 777
+ AYILFY R
Sbjct: 1071 LRSEAYILFYER 1082
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 468 GICPRGLLNCGNSCYANAVLQCLTSTKPLLIYLLYR--SHSRACCAKDWCLMCELEQHIM 525
G RGL+N GN+C+ N+V+Q L S L + L S S + L E
Sbjct: 198 GYAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFLKEDLSVSGPLVSSLKELFAESNSEAS 257
Query: 526 ILRENGAPLSPSRILWHMRSINSHMGDGSQEDAHEFLRLLVASM---QSICLEGLGGEKK 582
+ R ++P + + + S Q D+HE LR L+ + +S + LG
Sbjct: 258 VFRNE---INPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGLSIEESSLRKKLGVSDS 314
Query: 583 VDPR-LQETTFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEI 627
D Q+ T I F G + S V CL C H S+ YE MDL+L +
Sbjct: 315 NDSSTYQKPTLIDSVFGGEISSTVSCLECGHFSKVYEPFMDLSLPV 360
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGA 532
GL N G +CY N++LQ L P +Y + A + L+ L+ N
Sbjct: 198 GLKNQGATCYMNSLLQTLYHI-PYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT 256
Query: 533 PLSPSRIL--WHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQET 590
++ + + + +S M Q D E R+L + E K+ + E
Sbjct: 257 SVATKELTKSFGWDTYDSFM----QHDVQELNRVLCEKL----------EDKMKGTVVEG 302
Query: 591 TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGE 650
T IQ F G + ++C+N D++S R E+ DL L++ G + + + ++ E L+G+
Sbjct: 303 T-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGD 360
Query: 651 NMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQ----EGRYGKINKCITFPEMLDMI- 705
N Y A+K + + P +L + LKRF+ KIN FP LD+
Sbjct: 361 NKYH-AEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR 419
Query: 706 ---PFMTGTGD--IPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLQGNWFRIDDTEVQP 759
+++ D + LY L++V+VH ++ GHY ++++ L W++ DD V
Sbjct: 420 EDGRYLSPDADKSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTK 476
Query: 760 VQINQVMSD 768
+ + + +
Sbjct: 477 EDVKRALEE 485
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 34/309 (11%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGA 532
GL N G +CY N++LQ L P +Y + A + L+ L+ N
Sbjct: 199 GLKNQGATCYMNSLLQTLYHI-PYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT 257
Query: 533 PLSPSRIL--WHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQET 590
++ + + + +S M Q D E R+L + E K+ + E
Sbjct: 258 SVATKELTKSFGWDTYDSFM----QHDVQELNRVLCEKL----------EDKMKGTVVEG 303
Query: 591 TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGE 650
T IQ F G + ++C+N D++S R E+ DL L++ G + + + ++ E L+G+
Sbjct: 304 T-IQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGD 361
Query: 651 NMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQ----EGRYGKINKCITFPEMLDMI- 705
N Y A+K + + P +L + LKRF+ KIN FP LD+
Sbjct: 362 NKYH-AEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR 420
Query: 706 ---PFMTGTGD--IPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLQGNWFRIDDTEVQP 759
+++ D + LY L++V+VH ++ GHY ++++ L W++ DD V
Sbjct: 421 EDGRYLSPDADKSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERVTK 477
Query: 760 VQINQVMSD 768
+ + + +
Sbjct: 478 EDVKRALEE 486
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 34/298 (11%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGA 532
GL N G +CY N++LQ L P +Y + A + L+ L+ N
Sbjct: 199 GLKNQGATCYMNSLLQTLYHI-PYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT 257
Query: 533 PLSPSRIL--WHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQET 590
++ + + + +S M Q D E R+L + E K+ + E
Sbjct: 258 SVATKELTKSFGWDTYDSFM----QHDVQELNRVLCEKL----------EDKMKGTVVEG 303
Query: 591 TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGE 650
T IQ F G + ++C+N D +S R E+ DL L++ G + + + ++ E L+G+
Sbjct: 304 T-IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGD 361
Query: 651 NMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQ----EGRYGKINKCITFPEMLDMI- 705
N Y A+K + + P +L + LKRF+ KIN FP LD+
Sbjct: 362 NKYH-AEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR 420
Query: 706 ---PFMTGTGD--IPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLQGNWFRIDDTEV 757
+++ D + LY L++V+VH ++ GHY ++++ L W++ DD V
Sbjct: 421 EDGKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERV 475
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 34/298 (11%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGA 532
GL N G +CY N++LQ L P +Y + A + L+ L+ N
Sbjct: 200 GLKNQGATCYMNSLLQTLYHI-PYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT 258
Query: 533 PLSPSRIL--WHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQET 590
++ + + + +S M Q D E R+L + E K+ + E
Sbjct: 259 SVATKELTKSFGWDTYDSFM----QHDVQELNRVLCEKL----------EDKMKGTVVEG 304
Query: 591 TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGE 650
T IQ F G + ++C+N D +S R E+ DL L++ G + + + ++ E L+G+
Sbjct: 305 T-IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGD 362
Query: 651 NMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQ----EGRYGKINKCITFPEMLDMI- 705
N Y A+K + + P +L + LKRF+ KIN FP LD+
Sbjct: 363 NKYH-AEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR 421
Query: 706 ---PFMTGTGD--IPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLQGNWFRIDDTEV 757
+++ D + LY L++V+VH ++ GHY ++++ L W++ DD V
Sbjct: 422 EDGKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERV 476
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 34/298 (11%)
Query: 473 GLLNCGNSCYANAVLQCLTSTKPLLIYLLYRSHSRACCAKDWCLMCELEQHIMILRENGA 532
GL N G +CY N++LQ L P +Y + A + L+ L+ N
Sbjct: 200 GLKNQGATCYMNSLLQTLYHI-PYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDT 258
Query: 533 PLSPSRIL--WHMRSINSHMGDGSQEDAHEFLRLLVASMQSICLEGLGGEKKVDPRLQET 590
++ + + + +S M Q D E R+L + E K+ + E
Sbjct: 259 SVATKELTKSFGWDTYDSFM----QHDVQELNRVLCEKL----------EDKMKGTVVEG 304
Query: 591 TFIQHTFSGRLQSKVKCLNCDHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLDGE 650
T IQ F G + ++C+N D +S R E+ DL L++ G + + + ++ E L+G+
Sbjct: 305 T-IQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKG-CKDVYASFDKYVEVERLEGD 362
Query: 651 NMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQ----EGRYGKINKCITFPEMLDMI- 705
N Y A+K + + P +L + LKRF+ KIN FP LD+
Sbjct: 363 NKYH-AEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLDR 421
Query: 706 ---PFMTGTGD--IPPLYMLYAVIVHLDTLNASFSGHYISYVK-DLQGNWFRIDDTEV 757
+++ D + LY L++V+VH ++ GHY ++++ L W++ DD V
Sbjct: 422 EDGKYLSPDADRSVRNLYTLHSVLVHSGGVHG---GHYYAFIRPTLSDQWYKFDDERV 476
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGR--YG 690
SL L F E L + M+ C +C +A K+L + P +L I LKRF R
Sbjct: 769 SLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKH 828
Query: 691 KINKCITFP-EMLDMIPFMTGTG-DIPPLYMLYAVIVHLDTLNASFSGHYISYVKDLQGN 748
K+ + FP LD+ ++ P LY LYA+ H + SGHY +++K L +
Sbjct: 829 KLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYGGMG---SGHYTAHIKLLDDS 885
Query: 749 -WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ + + + V S AY+LFY R
Sbjct: 886 RWYNFDDSHISHINEDDVKSGAAYVLFYRR 915
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
Query: 633 SLEDALTQFTSPEDLDGENMYRCGRCTAYVRARKQLSIHEAPNILTIVLKRFQEGRY--G 690
SL L F + E L ++M+ C C + +A K+L + + P+IL LKRF RY
Sbjct: 734 SLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTYSRYFKN 793
Query: 691 KINKCITF-PEMLDMIPFMTGTGDIPPLYMLYAVIVHLDTLNASFSGHYISYVKDL-QGN 748
KI+ + F LD+ ++ LY LYA+ H L HY +Y K + +
Sbjct: 794 KIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGLGGG---HYTAYAKLMDETK 850
Query: 749 WFRIDDTEVQPVQINQVMSDGAYILFYMR 777
W+ DD+ V V +++ + AY+LFY R
Sbjct: 851 WYNFDDSRVSAVNESEIKTSAAYVLFYQR 879
>AT4G02220.1 | Symbols: | zinc finger (MYND type) family protein /
programmed cell death 2 C-terminal domain-containing
protein | chr4:976728-978902 FORWARD LENGTH=418
Length = 418
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 90 CSGCKSVRYCSGNCQIIHWRLIHKQECQQ 118
CSGCK+ RYCS Q +HWRL HK ECQQ
Sbjct: 200 CSGCKNARYCSPKHQALHWRLGHKTECQQ 228