Miyakogusa Predicted Gene
- Lj3g3v1011170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v1011170.1 Non Chatacterized Hit- tr|D7KC77|D7KC77_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,32.23,5e-18,seg,NULL; PPR,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR: pentatricopeptide
repea,CUFF.42056.1
(837 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 625 e-179
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 619 e-177
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 1e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 6e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 64 6e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 9e-10
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 60 6e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 7e-09
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 8e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 8e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-l... 59 1e-08
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 3e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 3e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 57 4e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 57 5e-08
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 5e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 6e-08
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 1e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 56 1e-07
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 55 1e-07
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 55 2e-07
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 55 3e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 55 3e-07
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 55 3e-07
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 54 3e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 54 5e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 5e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-07
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 54 6e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 53 9e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 9e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-06
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-06
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 52 1e-06
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 2e-06
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 2e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 4e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 4e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 4e-06
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 51 4e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 7e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 50 8e-06
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 9e-06
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-06
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 1e-05
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 625 bits (1613), Expect = e-179, Method: Compositional matrix adjust.
Identities = 322/727 (44%), Positives = 468/727 (64%), Gaps = 2/727 (0%)
Query: 97 ILEIPWVPDVPSGDISVKRKEVSRERKQKWVFKYSN-EDRSDRLLGMCAKRLGSKATVEV 155
L+IP DIS++ KE+SRERK++ V+K + R ++ A++LG++A
Sbjct: 82 FLKIPSFTTKIPYDISLRTKELSRERKERRVYKQNGLSRRFAKIFRDSAQKLGTEAMFGA 141
Query: 156 FGHLGRETGLKEYNKLIQLCVKKARGADDEDIAIEELSKAFHLLKLMREYGFPLGEQTYR 215
F + +E + EYN +I + ++ A ++D D A+ + KAF LLK MR+ GF + E+ Y
Sbjct: 142 FDRVAKEMSVTEYNAMIGVYLEHAEKSNDLDYALGHIEKAFELLKSMRDRGFLIEERVYG 201
Query: 216 PILQYLIDLGMVREFELFSDVIKAENASSTSRLGYYEMMLWLGVNHEEMIRDICEYITVE 275
P+L YLI + MV EF F DVI+ + S RLGYYEM+LW+ + E I ++C I +
Sbjct: 202 PLLGYLIGMDMVDEFHSFKDVIREASPGSVERLGYYEMLLWIHLGDGEKIEELCSTIDGD 261
Query: 276 DSEDTTALRESYLLALCESDRKTQILDVLKNIDITKLTSVESRSNIFQALGRLQLESDAE 335
+ E + L+E+YLLALC+ D+K + +L+ +DITK+ S + +NIF+ LGR L+S A
Sbjct: 262 NGESLSVLQENYLLALCKKDQKYHLERLLEIVDITKVRSSDLLANIFEYLGRFSLDSVAS 321
Query: 336 NLLLDLRASDQDPDDISNFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYKKLIQ 395
L +LR SD+ ++S+ I+ ++ PN ED I+K +HE LDV+PS +SY+KL++
Sbjct: 322 RFLWELRESDEGVKNVSDLISIYSTCTPNPTVEDTILKFNKMHEELDVMPSSTSYEKLVK 381
Query: 396 YCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGL 455
Y C +V TA+D+V+KM EAG +S +L S+LH +E ++ LV RI+SI+C +
Sbjct: 382 YSCDSNEVVTALDVVEKMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMCTKSVKP 441
Query: 456 NNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVL 515
N E RS++ R+KDF+GAY M+ +L+ N P ++M+N I+ GYFREKN+S L V+
Sbjct: 442 NTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVV 501
Query: 516 KHMREANVKPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEF 575
K M+EA VKPDS TF YLI NC E+ I KYYEE+K +G+QATK+I+M+LI+AYAA G+F
Sbjct: 502 KQMKEAGVKPDSITFGYLINNCTQEDAITKYYEEMKQAGVQATKRIYMSLIDAYAASGKF 561
Query: 576 EKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLI 635
EKAKQV++D +VP +E+KSVLISALAS + +AL IYEE++KA V+PK++ISLI
Sbjct: 562 EKAKQVLVDPDVPAINQNELKSVLISALASRGKWADALHIYEEMRKAECHVDPKSIISLI 621
Query: 636 EELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDKFESD 695
E + W+DG FR+I + V+N S + L K+ K +
Sbjct: 622 -EYSDSKGELSTLVQLADDLQDDTSWIDGFFRMILFAVRNKKSSDIVDLLKRNKVRLLKK 680
Query: 696 EIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLN 755
I +E FD VF IA ++ + + G+DLL +KDE+G +PSR+ LDFLL AC NA DL
Sbjct: 681 GIPVEAHFDEVFWAIAETEPSKVHLGMDLLRFMKDELGFVPSRKCLDFLLHACVNAKDLE 740
Query: 756 NARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKIPKDDMEVCSVILSCQN 815
+ L+W+EY+ A FP NVLS+LRMYQ LLA+GD A ++ KIPKDD +V +I Q+
Sbjct: 741 HGLLVWKEYQSAAFPCNVLSFLRMYQVLLAAGDSEGAKALVSKIPKDDKDVQHIIEESQS 800
Query: 816 TYSANDN 822
+S N
Sbjct: 801 AFSQAPN 807
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 619 bits (1595), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/827 (41%), Positives = 506/827 (61%), Gaps = 29/827 (3%)
Query: 1 MRVRKLCTLSSYFRSNLHRKPKFE------LAISNIVSSPEPHHDS-TSDFQLSTLKLHR 53
M ++ +LS+ FR + K +A +++S P S DF LS+LK
Sbjct: 1 MALKAKKSLSAIFRFAMRNAAKTAEVEAKAVAGDSLISDTGPVSMSLIPDF-LSSLK--- 56
Query: 54 ASTPEDSSD--SDVATTQLASIILPSPPVK----KLVSEENGKEEKDRRILEIPWVPDVP 107
+PEDSS+ D LA + + VK L+ E NG++ + +LE D+
Sbjct: 57 --SPEDSSNIGQDFGEPALAGQVSSALDVKSIGYNLLRERNGEKVFPKNVLE---TLDLL 111
Query: 108 S--GDISVKRKEVSRERKQKWVFKYSNEDRSDRLLGMCAKRLGSKATVEVFGHLGRETGL 165
S G S K K+ SR R ++ + ++L C ++LG++ EV +G+E G
Sbjct: 112 SRKGCSSQKPKQASRGRMLTENYQNKQSEIMEKLAKGCVRKLGTETMFEVLTKMGKEAGE 171
Query: 166 KEYNKLIQLCVKKARGADDEDIAIEELSKAFHLLKLMREYGFPLGEQTYRPILQYLIDLG 225
KEYN + +LC+++AR ++D + A++++ KA LK MR+ GF +GE Y P +YL+D+
Sbjct: 172 KEYNAMTKLCIQRARRSNDAEYALDQIGKAIEHLKEMRQLGFSIGEGAYGPFFKYLVDME 231
Query: 226 MVREFELFSDVIKAENASSTSRLGYYEMMLWLGVNHEEMIRDICEYITVEDSE-DTTALR 284
MV EF++ D IK S RL YYEM+LW+ VN EE I +C V+DS + L+
Sbjct: 232 MVAEFQILKDFIKEACPESCGRLVYYEMLLWIQVNDEEKIHKLCN--KVDDSGLSLSILQ 289
Query: 285 ESYLLALCESDRKTQILDVLKNIDITKLTSVESRSNIFQALGRLQLESDAENLLLDLRAS 344
E YL+ALCE D K +L+ +DIT ++S ++ +IF LG+ LES A LL +LR
Sbjct: 290 EYYLVALCEKDSKENFQKLLEIVDITTVSSPDALKSIFGYLGKSLLESVAMKLLWELRDC 349
Query: 345 DQDP-DDISNFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKV 403
+D + +SN I S+A IPN ED I K LHE LD++PS +SY+ L+ Y CG +V
Sbjct: 350 RKDGVETVSNLIFSYATCIPNSTVEDAIFKFNKLHEELDIVPSSTSYENLVSYLCGSNEV 409
Query: 404 DTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSL 463
TA+DIV+ MCEAG +S +L S+L E+ ++ LV RIYSI+ + N+E R
Sbjct: 410 VTALDIVENMCEAGLVISANILHSLLQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKS 469
Query: 464 VYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANV 523
+ +R+KDF+GAY M+ +L+ N P ++MYN+IM GYFREK ++ L VLK M+EA+V
Sbjct: 470 INLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADV 529
Query: 524 KPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVL 583
KPDS TFSYLI C E I KYY+E+K +G++ K ++M+L+ AYA+CG+FEKAKQV++
Sbjct: 530 KPDSVTFSYLINYCGEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLM 589
Query: 584 DSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQXXX 643
D EVP K +E+KSVLISALAS+ + EAL IYEE+KK VEPKA++SLIE +
Sbjct: 590 DLEVPAKDHNELKSVLISALASNGNITEALSIYEEMKKLRCPVEPKAILSLIEN-SDSNA 648
Query: 644 XXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDKFESDEIQLEVLF 703
+W+DG F++I + V+NN SS + L +Q K+ D++ +E F
Sbjct: 649 ELGTLVELTHELRDSKFWIDGFFKIIVFAVRNNRSSSILDLLEQTKNHLSKDDVGVEYWF 708
Query: 704 DSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLNNARLIWRE 763
+ VF IA ++S+ ++ GLDL+ +K+E+ L PSR+ LDFLL AC NA D +A L+W E
Sbjct: 709 EEVFKSIAETESSDVKVGLDLVSFMKEELELCPSRKCLDFLLHACVNAKDKQSALLVWEE 768
Query: 764 YEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKIPKDDMEVCSVI 810
Y+ A PYNV++YLRMYQ L+A+GD +SA ++ KIP DD +V +I
Sbjct: 769 YQCAELPYNVINYLRMYQVLVAAGDSKSAEAIVSKIPNDDKDVKCII 815
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 132/325 (40%), Gaps = 46/325 (14%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
++ FV+LKD+ A+ + ED+ K P +YN I+ + N+ + +K M++
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 523 VKPDSQTFSYLITNCQSEEDI---IKYYEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
+P ++TF +I D+ ++ ++ ++ G T F LIN + EKA
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 580 QVVLDSEVPHKYLHE-IKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEEL 638
+++ + + +E + ++ AS +A + ++ GL V+ I E L
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVD----IFTYEAL 700
Query: 639 TQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDK-FESDEI 697
+K C ++ + SA+ + K++ + +
Sbjct: 701 ------------------------------LKACCKSGRMQSALAVTKEMSARNIPRNSF 730
Query: 698 QLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLNNA 757
+L D ++ + DL+ +K E G+ P + +SAC+ AGD+N A
Sbjct: 731 VYNILID------GWARRGDVWEAADLIQQMKKE-GVKPDIHTYTSFISACSKAGDMNRA 783
Query: 758 RLIWREYEVAGFPYNVLSYLRMYQA 782
E E G N+ +Y + +
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKG 808
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P++ +Y LI + K+ A+++ M E G + + +++ + D+ +
Sbjct: 482 PTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAV 541
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + + + + +++ F + + A + ++++QK+ PT + I+ GY +
Sbjct: 542 FEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAK 601
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQI 561
++ L V MR P TF+ LI + E ++ +E+ L+G+ A +
Sbjct: 602 SGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661
Query: 562 FMALINAYAACGEFEKA 578
+ ++ YA+ G+ KA
Sbjct: 662 YTKIMQGYASVGDTGKA 678
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 32/273 (11%)
Query: 379 EVLDVL------PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHIC 432
EV D++ P++ ++ LI +++ AV+I+D+M AG + + I+
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 433 EETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTA 492
D ++ + L ++ +L+ + + A + +++ N +
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 493 AMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI---IKYYEE 549
+YN ++ G+ R ++ +++ M++ VKPD T++ I+ C D+ + EE
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 550 LKLSGIQATKQIFMALINAYA---------ACGEFEKAKQVVLDSEVPHKYLHEIKSVLI 600
++ G++ + + LI +A +C E KA + D V H L+
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH--------CLL 841
Query: 601 SALASHKQLPEA------LLIYEEVKKAGLGVE 627
++L S + EA + I +E+ +AGL V+
Sbjct: 842 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVD 874
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/310 (20%), Positives = 140/310 (45%), Gaps = 18/310 (5%)
Query: 341 LRASDQDPDDISNFIASFAVSIPNLAAE---DIIVKVENLHEVLDVLPSMSSYKKLIQYC 397
+R +PD IA+F + + + + + I+K+ + + + PS+ S ++
Sbjct: 564 MREKGIEPD-----IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGML 618
Query: 398 CGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNN 457
C K++ A+ I+++M + + L + + + + + + + L+
Sbjct: 619 CENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSR 678
Query: 458 EICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKH 517
++ +L+ +L K A ++ D++ FIP +N++M GYF ++ LS
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 518 MREANVKPDSQTFSYLITNCQSE---EDIIKYYEELKLSGIQATKQIFMALINAYAACGE 574
M EA + P+ T++ +I +++ K+ E+K G++ + ALI+ A G
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 575 FEKAK----QVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKA 630
+ + +++ D VP + +VLIS A+ ++ +A + +E+ K G+
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTY---NVLISEFANVGKMLQARELLKEMGKRGVSPNTST 855
Query: 631 VISLIEELTQ 640
++I L +
Sbjct: 856 YCTMISGLCK 865
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 462 SLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREA 521
+LV + D A +I + + + IP Y++++ GY ++ + +S+L+ M +
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 522 NVKPDSQTFSYLITN---CQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKA 578
NV P+ T+ +I EE I+ +E++L G++ I AL+N G ++
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 579 KQVVLD 584
K +V D
Sbjct: 489 KGLVKD 494
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 141/319 (44%), Gaps = 19/319 (5%)
Query: 320 NIFQALGRLQLESDAENLLLDLRASDQDP--DDISNFIASFAVS-IPNLAAE--DIIVKV 374
N F G ++ DA LL ++ +P + I + ++ P ++E D++++
Sbjct: 123 NAFSESGNME---DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 375 ENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEE 434
N+ DV P++ ++ L+Q C KV+ A ++V KM E G T +I +
Sbjct: 180 GNV----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 435 TYDYILVHR--IYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTA 492
+ + + ++ + N C +V + R + + + +++M
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 493 AMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSE---EDIIKYYEE 549
++N+++ G+ + G VL M+E NVK D T+S ++ S E + ++E
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 355
Query: 550 LKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQL 609
+ +G++ + L Y E +KA++++ V + I + +IS S+ +
Sbjct: 356 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSM 415
Query: 610 PEALLIYEEVKKAGLGVEP 628
+A+ ++ ++ K GV P
Sbjct: 416 DDAMRVFNKMCK--FGVSP 432
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 12/215 (5%)
Query: 399 GLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNE 458
GLLK A +VD+M +G + SIL C E+ L RI+SI+ R +LG N
Sbjct: 294 GLLK--EADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAY 351
Query: 459 ICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHM 518
+ +L+ + + + K A+ + D+ K + + +N ++ G + + + M
Sbjct: 352 VLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS----WNTMLHGLGVHGHGKEAIELFSRM 407
Query: 519 REANVKPDSQTFSYLITNCQS----EEDIIKYYEELKLSGIQATKQIFMALINAYAACGE 574
R ++PD TF ++ +C +E I +Y K+ + + + L++ G
Sbjct: 408 RREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGR 467
Query: 575 FEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQL 609
++A +VV +P + I L+ A H ++
Sbjct: 468 LKEAIKVV--QTMPMEPNVVIWGALLGACRMHNEV 500
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 109/222 (49%), Gaps = 10/222 (4%)
Query: 406 AVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVY 465
A+DI +M GF S + S+L C D + +++ + + + LN + +L+
Sbjct: 146 ALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLD 205
Query: 466 FFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKP 525
+ + K A ++ E +Q ++ +++++ GY + KN L + + + +++
Sbjct: 206 LYAKCGMIKDAVQVFESMQD----KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 526 DSQTFSYLITNCQSEEDII---KYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVV 582
+ T S +I C + +I + + + SG + + + ++ YA CG ++ +
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES--YI 319
Query: 583 LDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGL 624
+ SEV K L E+ + +IS A H + E ++++E++++ G+
Sbjct: 320 IFSEVQEKNL-ELWNTIISGFAKHARPKEVMILFEKMQQDGM 360
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 166/410 (40%), Gaps = 74/410 (18%)
Query: 402 KVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEI-- 459
+ ++++ I ++ + G S + L ++L++ + + LVH ++ + G+ I
Sbjct: 135 RYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN-SKESFGITPNIFT 193
Query: 460 CRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMR 519
C LV + D + AYK+++++ M +P Y I+GGY ++ VL+ M
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 520 EANVKPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
+ PD+ T++ L++ Y G F +A
Sbjct: 254 DRGWYPDATTYT--------------------------------VLMDGYCKLGRFSEAA 281
Query: 580 QVVLDSEVPHKYLHEIK-SVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEEL 638
V+ D E +E+ V+I AL K+ EA +++E+ + + +I+ L
Sbjct: 282 TVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDAL 341
Query: 639 TQXXXXXXXXXXXXXXXXXXDYWVD---GCFRVI--KYCVQNNHLSSAIVLF-------- 685
+ D+ VD G +R + C+ +N L S ++ +
Sbjct: 342 CE------------------DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVT 383
Query: 686 --KQLKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDF 743
++L D+FE I + ++++ + + K + G LW E P+ + +
Sbjct: 384 EARKLFDEFEKGSIPSLLTYNTLIAGMC-EKGELTEAG--RLWDDMYERKCKPNAFTYNV 440
Query: 744 LLSACANAGDLNNA-RLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSA 792
L+ + G++ R++ E+ FP N ++L +++ L G A
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFP-NKTTFLILFEGLQKLGKEEDA 489
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 23/273 (8%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
PS+ +Y LI C ++ A++ +D+M G + + +++ + +R+
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + +L+ + A ++ED+++ P Y+ ++ G+ R
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQI 561
++ L V + M E +KPD+ T+S LI C+ ++ YEE+ G+ +
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 562 FMALINAYAACGEFEKAKQVVLDSEVPHK-YLHEI--KSVLISALASHKQLPEA-----L 613
+ ALINAY G+ EKA Q L +E+ K L ++ SVLI+ L + EA
Sbjct: 523 YTALINAYCMEGDLEKALQ--LHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 614 LIYEEVKKAGL----------GVEPKAVISLIE 636
L YEE + + +E K+V+SLI+
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIK 613
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 114/274 (41%), Gaps = 21/274 (7%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
PS+ +Y LI C K++ A+ +++ M E G + ++L +YD R+
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + SL+ F + K A + E++ ++ P Y A++ Y
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCM 532
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLIT--NCQSEEDIIK------YYEELKLSGIQ 556
E ++ L + M E V PD T+S LI N QS K +YEE S +
Sbjct: 533 EGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVT 592
Query: 557 ATKQI----------FMALINAYAACGEFEKAKQVVLDSEVP--HKYLHEIKSVLISALA 604
I ++LI + G +A QV +S + HK +++I
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV-FESMLGKNHKPDGTAYNIMIHGHC 651
Query: 605 SHKQLPEALLIYEEVKKAGLGVEPKAVISLIEEL 638
+ +A +Y+E+ K+G + VI+L++ L
Sbjct: 652 RAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKAL 685
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 122/268 (45%), Gaps = 15/268 (5%)
Query: 374 VENLHEVLDVLP--SMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
+E EV +P S+ ++ +I+ + V+I+++M G S L SIL
Sbjct: 259 LEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMA 318
Query: 432 CEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPT 491
C + + + I+ + R + + + SL+ + + + A + QK
Sbjct: 319 CSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQK----DV 374
Query: 492 AAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQ---SEEDIIKYYE 548
A +N ++ Y N + V M VKPD TF+ ++ C + E + +
Sbjct: 375 AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHL 434
Query: 549 ELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQ 608
+ S ++ + + AL++ Y+ CG ++A ++ + +P K + +V+ISA SH Q
Sbjct: 435 SISESRLETDELLLSALLDMYSKCGNEKEAFRIF--NSIPKKDVVSW-TVMISAYGSHGQ 491
Query: 609 LPEALLIYEEVKKAGL---GVEPKAVIS 633
EAL ++E++K GL GV AV+S
Sbjct: 492 PREALYQFDEMQKFGLKPDGVTLLAVLS 519
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/247 (20%), Positives = 107/247 (43%), Gaps = 10/247 (4%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P + +Y LI C K+D A + D+MC+ G + + +++H + L+
Sbjct: 308 PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKES 367
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
Y + L + + +LV F + D A +++ + + P Y ++ G+ R
Sbjct: 368 YQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR 427
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDII---KYYEELKLSGIQATKQI 561
++ L + K M + ++ D FS L+ E +I + E+ +GI+
Sbjct: 428 GGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT 487
Query: 562 FMALINAYAACGE----FEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYE 617
+ +++A+ G+ F+ K++ D VP + +VL++ L Q+ A ++ +
Sbjct: 488 YTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY---NVLLNGLCKLGQMKNADMLLD 544
Query: 618 EVKKAGL 624
+ G+
Sbjct: 545 AMLNIGV 551
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 146/367 (39%), Gaps = 24/367 (6%)
Query: 455 LNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSV 514
LN + L+ F + + A K+ +++ K + PT +N ++ GY + N+ G +
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 515 LKHMREANVKPDSQTFSYLITNCQSEEDI---IKYYEELKLSGIQATKQIFMALINAYAA 571
M ++ +PD T+S LI E + ++E+ G+ IF LI+ ++
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 572 CGEFEKAK---QVVLDSEV-PHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVE 627
GE + K Q +L + P L+ + L++ + L A I + + + GL +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLY---NTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 628 PKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFR--VIKYCVQNNHLSSAIVLF 685
+LI+ + F V C + + + L
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 686 KQLKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLL 745
+ L+ + D++ ++ D A K Q G LL ++ + G +PS + + LL
Sbjct: 475 EMLRAGIKPDDVTYTMMMD------AFCKKGDAQTGFKLLKEMQSD-GHVPSVVTYNVLL 527
Query: 746 SACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKIPKDDME 805
+ G + NA ++ G + ++Y L G HR AN + I K ++
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITY-----NTLLEGHHRHANSSKRYIQKPEIG 582
Query: 806 VCSVILS 812
+ + + S
Sbjct: 583 IVADLAS 589
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 30/270 (11%)
Query: 371 IVKVENLHEVLDVL-------PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAG------ 417
I K+E +LD++ P+ + L+Q C K++ A +IV KM G
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 418 -FTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGA 476
F + I C T + +++ R+ + + N C ++V + + A
Sbjct: 497 TFNTLAKAYARIGSTC--TAEDMIIPRML----HNKVKPNVRTCGTIVNGYCEEGKMEEA 550
Query: 477 YKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN 536
+ ++++ P ++N+++ G+ ++ G V+ M E VKPD TFS L+
Sbjct: 551 LRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNA 610
Query: 537 CQSEEDIIK---YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEV----PH 589
S D+ + Y ++ GI F L YA GE EKA+Q++ P+
Sbjct: 611 WSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPN 670
Query: 590 KYLHEIKSVLISALASHKQLPEALLIYEEV 619
++ + +IS S ++ +A+ +Y+++
Sbjct: 671 VVIY---TQIISGWCSAGEMKKAMQVYKKM 697
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 88/462 (19%), Positives = 173/462 (37%), Gaps = 42/462 (9%)
Query: 393 LIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHH 452
L++ CC L VD A++ M E GF T+ IL + Y+ + R
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 453 LGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGL 512
+ N ++ + K A + ++ PT YN ++ G+ I G
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280
Query: 513 SVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAAC 572
++ M+ +PD QT++ +++ +E + E+K G+ + LI +
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
Query: 573 GEFEKA----KQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEP 628
G+ E A ++V VP Y + + LI L ++ A ++ E+++ G+ ++
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTY---NTLIHGLFMENKIEAAEILIREIREKGIVLDS 397
Query: 629 KAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCV-QNNHLSSAIVLFKQ 687
LI Q + + Y + + N A LF++
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457
Query: 688 LKDK-FESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEI-------------- 732
+ K + D + + L D ++ ++ L +D++ D++
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 733 --------------GLIPSRQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLR 778
G+ P S + L+S + GD +A ++ E GF +L+Y
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577
Query: 779 MYQALLASGDHRSANLMLKK-----IPKDDMEVCSVILSCQN 815
+ + L + + A +L++ I +D CSVI + N
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 103/241 (42%), Gaps = 35/241 (14%)
Query: 350 DISNFIASFAVSIPNLAAEDIIVKVEN---LHEVLDVLPSMSSYKKLIQYCCGLLKVDTA 406
+I + + +F + I L E + K + + EV + P++ +Y L+Q +++ A
Sbjct: 220 EIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGA 279
Query: 407 VDIVDKMCEAGFTLSTQVLQSILH-ICEETYDYILVHRI-----------YSIICRHHLG 454
I+ +M GF Q IL +C E ++ + Y+I+ R G
Sbjct: 280 RLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIR---G 336
Query: 455 LNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSV 514
+N D + A+ +++ K +PT YN ++ G F E I +
Sbjct: 337 CSNN------------GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 384
Query: 515 LKHMREANVKPDSQTFSYLITN-CQ--SEEDIIKYYEELKLSGIQATKQIFMALINAYAA 571
++ +RE + DS T++ LI CQ + ++E+ GIQ T+ + +LI Y
Sbjct: 385 IREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI--YVL 442
Query: 572 C 572
C
Sbjct: 443 C 443
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 96/453 (21%), Positives = 184/453 (40%), Gaps = 74/453 (16%)
Query: 322 FQALGRLQLESDAENLLLDLRASDQDPDDIS-NFIASFAVSIPNLAAEDIIVKVENLHE- 379
F +GRL ++A +++D++ P I+ N + AV + +I EN+ +
Sbjct: 157 FSEIGRL---NEAVGMVMDMQNQGLTPSSITMNCVLEIAVEL------GLIEYAENVFDE 207
Query: 380 --VLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSIL-HICEETY 436
V V+P SSYK ++ C K+ A + M + GF IL +CE
Sbjct: 208 MSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG- 266
Query: 437 DYILVHR-IYSIICRHHLGLNNEICR--SLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAA 493
LV+R I+ LG + SL+ + K A++M+E++ + + P
Sbjct: 267 ---LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 494 MYNAIMGGYFREKNISGGLSV-LKHMREANVKPDSQTFSYLITNCQSEEDIIK---YYEE 549
+ A++ G + + LK +R KP+ T++ +I E+ + + +
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383
Query: 550 LKLSGIQATKQIFMALINAYAACGEFEKAKQVVL----DSEVPHKYLHEIKSVLISALAS 605
+K G+ + LIN + G F +A +++ + +P+ Y + + I +L
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTY---NAAIDSLCK 440
Query: 606 HKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGC 665
+ PEA + + GL + LI+E
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQE---------------------------- 472
Query: 666 FRVIKYCVQNNHLSSAIVLFKQL-KDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDL 724
C QN+ ++ A+ F ++ K FE+D ++L + + F K + F L +
Sbjct: 473 -----QCKQND-INQALAFFCRMNKTGFEAD-MRLNNILIAAFCRQKKMKESERLFQLVV 525
Query: 725 LWAIKDEIGLIPSRQSLDFLLSACANAGDLNNA 757
+GLIP++++ ++S GD++ A
Sbjct: 526 ------SLGLIPTKETYTSMISCYCKEGDIDLA 552
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 106/246 (43%), Gaps = 19/246 (7%)
Query: 384 LPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHR 443
+P++ +Y I C + A ++++K G + V +IL +E +++
Sbjct: 425 MPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLE-ADGVTYTIL--IQEQCKQNDINQ 481
Query: 444 IYSIICRHH-------LGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYN 496
+ CR + + LNN L+ F R K K + ++ + + + IPT Y
Sbjct: 482 ALAFFCRMNKTGFEADMRLNN----ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYT 537
Query: 497 AIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLS 553
+++ Y +E +I L +M+ PDS T+ LI+ C+ ++ K YE +
Sbjct: 538 SMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDR 597
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEAL 613
G+ + + L AY C + A ++L + K L+ L S K++ A
Sbjct: 598 GLSPPEVTRVTL--AYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAA 655
Query: 614 LIYEEV 619
L ++++
Sbjct: 656 LFFQKL 661
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 113/259 (43%), Gaps = 6/259 (2%)
Query: 369 DIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSI 428
D+ + + N E + ++ + +I C V+ AVD+ +M G + S+
Sbjct: 240 DLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 429 LHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNF 488
++ + R+ S + + N +L+ F + A K+ E++ + +
Sbjct: 300 INCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSI 359
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN---CQSEEDIIK 545
P YN ++ G+ + + K M + P+ QT++ LI C+ ED ++
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 546 YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK--SVLISAL 603
+ E+ G+ + +I + G+ + A Q+V V ++ +I S+L+ L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA-QMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 604 ASHKQLPEALLIYEEVKKA 622
S+ +L AL+I++ ++K+
Sbjct: 479 CSYGKLDTALVIFKYLQKS 497
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/432 (18%), Positives = 176/432 (40%), Gaps = 50/432 (11%)
Query: 400 LLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEI 459
++KVD AVD+ M ++ S +L + + LV + + LG+++++
Sbjct: 61 IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM--QTLGISHDL 118
Query: 460 CRSLVYF--FVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKH 517
++ F R A ++ + K+ + P ++++ GY K IS ++++
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQ 178
Query: 518 MREANVKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGE 574
M E KPD+ TF+ LI + + +++ G Q + ++N G+
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 575 FEKAKQVVLDSEVPH-KYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVI- 632
+ A ++ E K I + +I +L ++ + A+ ++ E++ G+ P V
Sbjct: 239 IDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK--GIRPNVVTY 296
Query: 633 -SLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDK 691
SLI L W D R++ ++ ++ +V F L D
Sbjct: 297 NSLINCLCNYGR-----------------WSDAS-RLLSNMLE-KKINPNVVTFNALIDA 337
Query: 692 F-------ESDEIQLEVLFDSV------FSVIASSKSTHLQFG-LDLLWAIKDEIGLIPS 737
F E++++ E++ S+ ++++ + H + ++ +P+
Sbjct: 338 FFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPN 397
Query: 738 RQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLK 797
Q+ + L++ + + ++RE G N ++Y + Q +GD SA ++ K
Sbjct: 398 IQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFK 457
Query: 798 -----KIPKDDM 804
++P D M
Sbjct: 458 QMVSNRVPTDIM 469
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 48/241 (19%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEETYDYILVHRIYSI 447
+Y LI CC + V+ A+ +KM EAG + ++ +++ +C+ D+
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH--------- 528
Query: 448 ICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKN 507
A +++E L++ F YN ++G + + N
Sbjct: 529 ---------------------------DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 508 ISGGLSVLKHMREANVKPDSQTFSYLITNCQSEED---IIKYYEELKLSGIQATKQIFMA 564
+L M + KPDS T++ LI+ +D + + E+++ G+ T + A
Sbjct: 562 TEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 565 LINAYAACGEFEKA----KQVVLDSEV-PHKYLHEIKSVLISALASHKQLPEALLIYEEV 619
+I+AY + GE ++A K + L S+V P+ ++ I LI+A + +AL + EE+
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI---LINAFSKLGNFGQALSLKEEM 678
Query: 620 K 620
K
Sbjct: 679 K 679
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P Y LI C + + A+ +V+K+ E GF+L ++ + + + V+ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEM 568
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + ++ +L+ FF + KDF+ +M+E +++ PT Y A++ Y
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 505 EKNISGGLSVLKHMR-EANVKPDSQTFSYLI---TNCQSEEDIIKYYEELKLSGIQATKQ 560
+ L + K M + V P++ ++ LI + + + EE+K+ ++ +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 561 IFMAL 565
+ AL
Sbjct: 689 TYNAL 693
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 48/241 (19%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEETYDYILVHRIYSI 447
+Y LI CC + V+ A+ +KM EAG + ++ +++ +C+ D+
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH--------- 528
Query: 448 ICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKN 507
A +++E L++ F YN ++G + + N
Sbjct: 529 ---------------------------DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 508 ISGGLSVLKHMREANVKPDSQTFSYLITNCQSEED---IIKYYEELKLSGIQATKQIFMA 564
+L M + KPDS T++ LI+ +D + + E+++ G+ T + A
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 565 LINAYAACGEFEKA----KQVVLDSEV-PHKYLHEIKSVLISALASHKQLPEALLIYEEV 619
+I+AY + GE ++A K + L S+V P+ ++ I LI+A + +AL + EE+
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI---LINAFSKLGNFGQALSLKEEM 678
Query: 620 K 620
K
Sbjct: 679 K 679
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P Y LI C + + A+ +V+K+ E GF+L ++ + + + V+ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + ++ +L+ FF + KDF+ +M+E +++ PT Y A++ Y
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 505 EKNISGGLSVLKHMR-EANVKPDSQTFSYLI---TNCQSEEDIIKYYEELKLSGIQATKQ 560
+ L + K M + V P++ ++ LI + + + EE+K+ ++ +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 561 IFMAL 565
+ AL
Sbjct: 689 TYNAL 693
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 48/241 (19%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEETYDYILVHRIYSI 447
+Y LI CC + V+ A+ +KM EAG + ++ +++ +C+ D+
Sbjct: 478 TYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDH--------- 528
Query: 448 ICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKN 507
A +++E L++ F YN ++G + + N
Sbjct: 529 ---------------------------DAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNN 561
Query: 508 ISGGLSVLKHMREANVKPDSQTFSYLITNCQSEED---IIKYYEELKLSGIQATKQIFMA 564
+L M + KPDS T++ LI+ +D + + E+++ G+ T + A
Sbjct: 562 AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGA 621
Query: 565 LINAYAACGEFEKA----KQVVLDSEV-PHKYLHEIKSVLISALASHKQLPEALLIYEEV 619
+I+AY + GE ++A K + L S+V P+ ++ I LI+A + +AL + EE+
Sbjct: 622 VIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNI---LINAFSKLGNFGQALSLKEEM 678
Query: 620 K 620
K
Sbjct: 679 K 679
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 84/185 (45%), Gaps = 4/185 (2%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P Y LI C + + A+ +V+K+ E GF+L ++ + + + V+ +
Sbjct: 509 PDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEM 568
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + ++ +L+ FF + KDF+ +M+E +++ PT Y A++ Y
Sbjct: 569 LTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCS 628
Query: 505 EKNISGGLSVLKHMR-EANVKPDSQTFSYLI---TNCQSEEDIIKYYEELKLSGIQATKQ 560
+ L + K M + V P++ ++ LI + + + EE+K+ ++ +
Sbjct: 629 VGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVE 688
Query: 561 IFMAL 565
+ AL
Sbjct: 689 TYNAL 693
>AT2G01860.1 | Symbols: EMB975 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:388283-389743 FORWARD
LENGTH=486
Length = 486
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 421 STQVLQSILHICEETYDY-ILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKM 479
S+ ++ IL I + Y ++V + + R L L+ + C S++ V+L +F+ +
Sbjct: 291 SSVYVKMILEIAKNPDKYHLVVALLEELKKREDLKLSQQDCTSIMKICVKLGEFELVESL 350
Query: 480 IEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQS 539
+ + N P+ MY ++ + E+ +SV+ M E+N D + +I +
Sbjct: 351 FDWFKASNREPSVVMYTTMIHSRYSEQKYREAMSVVWEMEESNCLLDLPAYRVVIKLFVA 410
Query: 540 EEDI---IKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSE 586
+D+ ++YY +LK +G T I+ +I+ Y A G K K++ + E
Sbjct: 411 LDDLGRAMRYYSKLKEAGFSPTYDIYRDMISVYTASGRLTKCKEICKEVE 460
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
L+ FV+ + A ++++++ + P YN+++ G+ +E + + ++ M
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 523 VKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
PD TF+ LI C++ +D ++ + E+ L G+ A + L+ + G+ E AK
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 580 QVVLDSEVPHKYLHEIKS--VLISALASHKQLPEALLIYEEVKKA 622
+ + V + +I S +L+ L + +L +AL I+ +++K+
Sbjct: 459 K-LFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 109/261 (41%), Gaps = 6/261 (2%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P++ + L+ C KV AV ++D+M E GF + +L++ ++ L +
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMEL 250
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ ++ L+ ++ + A+ + +++ F YN ++GG+
Sbjct: 251 LRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCN 310
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSE---EDIIKYYEELKLSGIQATKQI 561
G +L+ M + + P+ TFS LI + E + + +E+ GI
Sbjct: 311 AGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 562 FMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKS--VLISALASHKQLPEALLIYEEV 619
+ +LI+ + E+A Q+V D + +I + +LI+ ++ + L ++ E+
Sbjct: 371 YNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 620 KKAGLGVEPKAVISLIEELTQ 640
G+ +L++ Q
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQ 450
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 121/300 (40%), Gaps = 18/300 (6%)
Query: 342 RASDQDPDDISNFIASFAVSIPNL----AAEDIIVKVENLHEV---------LDVLPSMS 388
R ++ ++ + F VS PNL A D + K HE + + P+
Sbjct: 345 RGKIEEALNLVKRVVDFGVS-PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV 403
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSII 448
+Y LI C K+DTA+ + +M + G LS S+++ + D + +
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 449 CRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNI 508
L SL+ + A ++ ++ P+ + ++ G FR I
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 509 SGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYE---ELKLSGIQATKQIFMAL 565
+ + M E NVKP+ T++ +I E D+ K +E E+ GI + L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 566 INAYAACGEFEKAKQVVLDSEVPHKYLHEI-KSVLISALASHKQLPEALLIYEEVKKAGL 624
I+ G+ +AK V + L+EI + L+ +L EAL + +E+ + G+
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSII 448
+Y +I C KV+ A ++++M GF + S++ + + ++
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 449 CRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNI 508
+ LN I SL+ F ++ AY ++E+L + P +N+++ + + I
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEI 708
Query: 509 SGGLSVLKHMREANVKPDSQTFSYLITN-CQSEE--DIIKYYEELKLSGIQATKQIFMAL 565
+ L + M+E P+ T+ LI C+ + +++E++ G++ + + +
Sbjct: 709 NEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Query: 566 INAYAACGEFEKAKQVV----LDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKK 621
I+ A G +A + + VP + + +I L++ + +A ++EE ++
Sbjct: 769 ISGLAKAGNIAEAGALFDRFKANGGVPDSACY---NAMIEGLSNGNRAMDAFSLFEETRR 825
Query: 622 AGLGVEPKAVISLIEEL 638
GL + K + L++ L
Sbjct: 826 RGLPIHNKTCVVLLDTL 842
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/482 (19%), Positives = 187/482 (38%), Gaps = 72/482 (14%)
Query: 361 SIPNLAAEDIIV----KVENLHEVL--------DVLPSMSSYKKLIQYCCGLLKVDTAVD 408
SIP++ A + I+ K+ + E L D P++S+Y LI C K+DTA +
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 409 IVDKMCEAGFTLSTQVLQSIL-HICE-----------ETYDYIL---------------- 440
+ D M +AG + + + ++ +C+ E DY +
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 441 -------VHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAA 493
+++Y + N+ + SL+ F + +K+ +D+ N P
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQ 518
Query: 494 MYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYE---EL 550
+ N M F+ G ++ + ++ PD++++S LI + YE +
Sbjct: 519 LLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSM 578
Query: 551 KLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHE---IKSVLISALASHK 607
K G + + +I+ + CG+ KA Q++ E+ K +I LA
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL--EEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 608 QLPEALLIYEEVKKAGLGVEPKAVISLIEELTQXXXXXXX-----XXXXXXXXXXXDYWV 662
+L EA +++EE K + + SLI+ + W
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 663 DGCFRVIKYCVQNNHLSSAIVLFKQLKD-KFESDEIQLEVLFDSVFSVIASSKSTHLQFG 721
++ V+ ++ A+V F+ +K+ K +++ +L + + V +K+
Sbjct: 697 S----LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF----- 747
Query: 722 LDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQ 781
+ W + G+ PS S ++S A AG++ A ++ ++ G + Y M +
Sbjct: 748 --VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIE 805
Query: 782 AL 783
L
Sbjct: 806 GL 807
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 140/337 (41%), Gaps = 49/337 (14%)
Query: 459 ICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHM 518
+C +++ + + A +++ ++ P YN +M G+ R+KN+ V ++
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 519 REANVKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEF 575
E +KP++ T+S LI C E++ ++ + S I+ ++ +IN G+
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 576 EKAKQVVLDSEVPHKYLHEIKSV--LISALASHKQLPEALLIYEEVKKAGLGVEPKAV-- 631
KA++++ + + S +I ++ A+ YEE+ G G+ P +
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM--CGNGISPNVITY 622
Query: 632 ISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDK 691
SL+ L +NN + A+ +++D+
Sbjct: 623 TSLMNGL----------------------------------CKNNRMDQAL----EMRDE 644
Query: 692 FESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANA 751
++ ++L++ + K ++++ L + +E GL PS+ + L+S N
Sbjct: 645 MKNKGVKLDIPAYGAL-IDGFCKRSNMESASALFSELLEE-GLNPSQPIYNSLISGFRNL 702
Query: 752 GDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGD 788
G++ A ++++ G ++ +Y + LL G+
Sbjct: 703 GNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGN 739
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 66/151 (43%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
PS Y LI L + A+D+ KM + G +++ + + IL +
Sbjct: 687 PSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
Y+ + L + I +V + F KM E+++K N P +YNA++ G++R
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLIT 535
E N+ + M + + PD TF L++
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILVS 837
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/302 (19%), Positives = 136/302 (45%), Gaps = 27/302 (8%)
Query: 345 DQDPDDISNFIASFAVSIPNLAAEDII---VKVENLHEVLDVLPSMSSYKKLIQYCC--- 398
+Q+ ++ N + S + + + + II KV + ++L +M K+L C
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 399 ----GLLK---VDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEET-YDYILVHRIYSIIC 449
G K +D+AV ++MC G + + S+++ +C+ D L R +
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMR--DEMK 646
Query: 450 RHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNIS 509
+ L+ +L+ F + + + A + +L + P+ +YN+++ G+ N+
Sbjct: 647 NKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 510 GGLSVLKHMREANVKPDSQTFSYLITNCQSEEDII---KYYEELKLSGIQATKQIFMALI 566
L + K M + ++ D T++ LI + ++I + Y E++ G+ + I+ ++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 567 NAYAACGEFEKA----KQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKA 622
N + G+F K +++ ++ P+ ++ + +I+ L EA +++E+
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY---NAVIAGHYREGNLDEAFRLHDEMLDK 823
Query: 623 GL 624
G+
Sbjct: 824 GI 825
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/261 (18%), Positives = 119/261 (45%), Gaps = 9/261 (3%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P++ SY ++ C +D A + + E G + ++ C +D +
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAM-YNAIMGGYF 503
+ + ++ +N + ++++ ++ A +++ ++ + + + M YN+I+ G+F
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 504 REKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQ 560
+E + ++ + M + P+ T++ L+ C++ + ++ +E+K G++
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 561 IFMALINAYAACGEFEKAKQVVLDSEVPHKYLH---EIKSVLISALASHKQLPEALLIYE 617
+ ALI+ + E A L SE+ + L+ I + LIS + + AL +Y+
Sbjct: 656 AYGALIDGFCKRSNMESAS--ALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYK 713
Query: 618 EVKKAGLGVEPKAVISLIEEL 638
++ K GL + +LI+ L
Sbjct: 714 KMLKDGLRCDLGTYTTLIDGL 734
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 114/244 (46%), Gaps = 15/244 (6%)
Query: 390 YKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIIC 449
Y +I C L +D ++M GFT +T +L + + + V+ ++ +
Sbjct: 667 YNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK 726
Query: 450 RHHLGLNNEIC-RSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNI 508
RH G+ + I +++ + + KD+ I+++Q F + YN ++ Y ++K +
Sbjct: 727 RH--GVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQM 784
Query: 509 SGGLSVLKHMREANVKPDSQTFSYLITNCQSEE----DIIKYYEELKLSGIQATKQIFMA 564
S+LK M+++ PD T++ +I N E+ ++ +ELK SG+ +
Sbjct: 785 EKFRSILKRMKKSTSGPDHYTYNIMI-NIYGEQGWIDEVADVLKELKESGLGPDLCSYNT 843
Query: 565 LINAYAACGEFEKAKQVVLDSE----VPHKYLHEIKSVLISALASHKQLPEALLIYEEVK 620
LI AY G E+A +V + +P K + + L++AL + + EA+ +K
Sbjct: 844 LIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTY---TNLVTALRRNDEFLEAIKWSLWMK 900
Query: 621 KAGL 624
+ G+
Sbjct: 901 QMGI 904
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 124/284 (43%), Gaps = 23/284 (8%)
Query: 374 VENLHEVLDVL------PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQS 427
+ N+H VL+++ P + ++ C +VD A D++ ++ E T
Sbjct: 140 ISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNF 199
Query: 428 IL-HICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRL------KDFKGAYKMI 480
+L H+C+ D +H +Y + + + ++ LV F + + K+ + A ++
Sbjct: 200 LLKHLCK-CKD---LHVVYEFV--DEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLV 253
Query: 481 EDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI---TNC 537
L F P +YN IM G+ S + V K M+E V+PD T++ LI +
Sbjct: 254 SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKA 313
Query: 538 QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK- 596
E+ Y + + +G + + +L+N GE A ++ + E ++
Sbjct: 314 GRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTY 373
Query: 597 SVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
+ L+ L + + + + +YE +K +G+ +E +L+ L +
Sbjct: 374 NTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVK 417
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 127/297 (42%), Gaps = 17/297 (5%)
Query: 333 DAENLLLDLRASDQDPDDIS-NFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYK 391
+A++L+ +L PD + NF+ +L + V+ + + DV P + S+
Sbjct: 177 EAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV--VYEFVDEMRDDFDVKPDLVSFT 234
Query: 392 KLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEETYDYILVHRIYSIICR 450
LI C + A+ +V K+ AGF + +I+ C + V +Y +
Sbjct: 235 ILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVG-VYKKMKE 293
Query: 451 HHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISG 510
+ + +L++ + + A ++ + + P A Y ++M G R+ G
Sbjct: 294 EGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLG 353
Query: 511 GLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALIN 567
LS+L+ M P+ T++ L+ C++ + ++ YE +K SG++ + L+
Sbjct: 354 ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVR 413
Query: 568 AYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGL 624
+ G+ +A +V + + + S +S +++ L L ++ K+ GL
Sbjct: 414 SLVKSGKVAEAYEV---------FDYAVDSKSLSDASAYSTLETTLKWLKKAKEQGL 461
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 428 ILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMN 487
IL CE I +H I+ + + L N ++C +L+ +++ A K+ +++
Sbjct: 30 ILSFCESNSSRIGLH-IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 488 FIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDII--- 544
M +A + + + + LS+ + M + P+ TFS ++ +C DI
Sbjct: 89 VFAWTVMISA----FTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGG 144
Query: 545 KYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALA 604
+ + + +G + + +L + Y+ CG+F++A ++ + +++IS+L
Sbjct: 145 RVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISW---TMMISSLV 201
Query: 605 SHKQLPEALLIYEEVKKAGL 624
++ EAL Y E+ KAG+
Sbjct: 202 GARKWREALQFYSEMVKAGV 221
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 85/167 (50%), Gaps = 8/167 (4%)
Query: 462 SLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREA 521
+L+ V+ A ++ D+ + PT YN+++ G+ ++ ++ +L M
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 522 NVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKA 578
+ PD TFS LI C+++ ++ ++ + E+ GI A + LI+ + G+ + A
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 579 K---QVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKA 622
+ V++ S V Y+ +S+L S L S K+L +A I E+++K+
Sbjct: 271 QDLLNVMISSGVAPNYI-TFQSMLAS-LCSKKELRKAFAILEDLQKS 315
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/315 (16%), Positives = 136/315 (43%), Gaps = 12/315 (3%)
Query: 314 SVESRSNIFQALGRLQLESDAENLLLDLRASDQDPDDISNFIASFAVSIPNLAAEDIIVK 373
+V + + + ++ G+L + E LL R ++ + + + +F ++ L + +
Sbjct: 186 TVSAANALIKSFGKLGM---VEELLWVWRKMKENGIEPTLYTYNFLMN--GLVSAMFVDS 240
Query: 374 VENLHEVLD---VLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH 430
E + EV++ + P + +Y +I+ C + A++ + M G +++
Sbjct: 241 AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 431 ICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIP 490
C D+ +Y + + + ++ + Y + E++ + P
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 491 TAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYY 547
A+Y ++ GY + ++ + +L M + KPD T+S ++ C++ E+ + Y+
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 548 EELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLD-SEVPHKYLHEIKSVLISALASH 606
+ G+ + +LI+ G ++A+++ + SE + LI A H
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 607 KQLPEALLIYEEVKK 621
+++ EA+ +++ +++
Sbjct: 481 RKVDEAIALFKRMEE 495
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 113/257 (43%), Gaps = 15/257 (5%)
Query: 380 VLDVLPSMSSYKKLIQYCCGLLKVDTA--VDIVDKMCEAGFTLSTQVLQSILHICEETYD 437
V D +P Y + C L ++ V + D + + GF V L C E D
Sbjct: 98 VFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQD 157
Query: 438 YILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNA 497
+I+ + + +N + L+ + + + K A+K+ D+ N + + +
Sbjct: 158 LDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVV----CWTS 212
Query: 498 IMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIK---YYEELKLSG 554
++ GY + GL + MRE NV + T+ LI C + + ++ L SG
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 555 IQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALL 614
I+ + + +L++ Y CG+ A++V +E H L + + +I + + EAL
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVF--NEHSHVDL-VMWTAMIVGYTHNGSVNEALS 329
Query: 615 IYEEVKKAGLGVEPKAV 631
+++++K G+ ++P V
Sbjct: 330 LFQKMK--GVEIKPNCV 344
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 126/280 (45%), Gaps = 14/280 (5%)
Query: 368 EDIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQS 427
E + KV+ L ++ P + +Y LI+ + + A++++ +M + G ++T L +
Sbjct: 397 EAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNT 456
Query: 428 ILH-ICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKM 486
IL +C+E H + + + ++ +L+ F R + + A +M ++++K+
Sbjct: 457 ILDALCKER-KLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKV 515
Query: 487 NFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSE---EDI 543
PT + +N+++GG + + E+ + PD TF+ +I E E
Sbjct: 516 KITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKA 575
Query: 544 IKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK-SVLISA 602
++Y E + L+N G EKA ++ + + + + + +ISA
Sbjct: 576 FEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN-FFNTLIEEREVDTVTYNTMISA 634
Query: 603 LASHKQLPEALLIYEEVKKAGLGVEP-----KAVISLIEE 637
K+L EA + E+++ GL EP + ISL+ E
Sbjct: 635 FCKDKKLKEAYDLLSEMEEKGL--EPDRFTYNSFISLLME 672
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 120/248 (48%), Gaps = 30/248 (12%)
Query: 401 LKVDTAVD--IVDKMCEAGFTLSTQVLQSILHICEE-------TYDYILVHRIYS----- 446
+K D + IVD++C+ G ++ Q L + +H E+ TY+ ++ +S
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMH--EKGIFPNVLTYNCMIDSFCHSGRWSD 63
Query: 447 --IICRHHL--GLNNEIC--RSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
+ RH + +N +I +L+ FV+ + A ++ +++ + + PT YN+++
Sbjct: 64 ADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMID 123
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQA 557
G+ ++ + +L M PD TFS LI C+++ ++ ++ + E+ GI A
Sbjct: 124 GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA 183
Query: 558 TKQIFMALINAYAACGEFEKAKQV---VLDSEVPHKYLHEIKSVLISALASHKQLPEALL 614
+ LI+ + G+ + A+ + ++ V Y+ +++ L S K+L +A
Sbjct: 184 NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI--TFHCMLAGLCSKKELRKAFA 241
Query: 615 IYEEVKKA 622
I E+++K+
Sbjct: 242 ILEDLQKS 249
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 139/314 (44%), Gaps = 29/314 (9%)
Query: 461 RSLVYFFVRLKDFKGAYKMIEDLQKM-NFIPT--AAMYNAIMGGYFREKNISGGLSVLKH 517
R +V + +K + + IE+ QK+ + IP +NA++ GY N L + K
Sbjct: 198 RDVVSYTALIKGY-ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256
Query: 518 MREANVKPDSQTFSYLITNCQSEEDIIKYYEELKL----SGIQATKQIFMALINAYAACG 573
M + NV+PD T +++ C ++ I+ ++ L G + +I ALI+ Y+ CG
Sbjct: 257 MMKTNVRPDESTMVTVVSAC-AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 315
Query: 574 EFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVIS 633
E E A L +P+K + + LI EALL+++E+ ++G ++S
Sbjct: 316 ELETA--CGLFERLPYKDVISWNT-LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 634 LIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIV-LFKQLKDKF 692
++ ++D + +K + L ++++ ++ + D
Sbjct: 373 ILPACAHLGAIDIGRWIHV--------YID---KRLKGVTNASSLRTSLIDMYAKCGDIE 421
Query: 693 ESDEIQLEVLFDSVFS----VIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSAC 748
+ ++ +L S+ S + + DL ++ +IG+ P + LLSAC
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSAC 480
Query: 749 ANAGDLNNARLIWR 762
+++G L+ R I+R
Sbjct: 481 SHSGMLDLGRHIFR 494
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 22/267 (8%)
Query: 374 VENLHEVLDVLP--SMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
++++ V +V+P + SY +I + A+ +V +M + L S+L I
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 432 CEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMN---F 488
E D I I+ + R G++++ VY L D IED +++ +
Sbjct: 252 FSEYVDVIKGKEIHGYVIRK--GIDSD-----VYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI---IK 545
+N+++ GY + + L + + M A VKP + FS +I C + +
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 546 YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK-SVLISALA 604
+ + G + I AL++ Y+ CG + A+++ V L E+ + +I A
Sbjct: 365 LHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV----LDEVSWTAIIMGHA 420
Query: 605 SHKQLPEALLIYEEVKKAGLGVEPKAV 631
H EA+ ++EE+K+ GV+P V
Sbjct: 421 LHGHGHEAVSLFEEMKRQ--GVKPNQV 445
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 119/284 (41%), Gaps = 28/284 (9%)
Query: 369 DIIVKVENLHEVLDVLPSMSSYKKLIQY---CCGLLKVDTAVD--------IVDKMCEAG 417
D+ K +L E + + M S K ++ Y G L++D D + M G
Sbjct: 295 DMYAKNGSLKEAIKLFSLMPS-KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Query: 418 FTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAY 477
S +L C +I+++IC+++ + I +L+ + + +
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGM 413
Query: 478 KMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC 537
+ K + A + +++ + + + + + + + ++++P+ T S +++ C
Sbjct: 414 QCFASTSKQDI----ASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC 469
Query: 538 ------QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKY 591
S E I Y + SGI A + + I+ YA G A QV ++ + P
Sbjct: 470 ADFAALSSGEQIQGYAIK---SGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVA 526
Query: 592 LHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLI 635
+ S +IS+LA H EAL I+E +K G+ +A + ++
Sbjct: 527 TY---SAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVL 567
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 372 VKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
+K++N+ + P++ ++ LI C +K+ A + +M +T ++++
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 432 CEETYDYILVHRIY-SIICRHHLGLNNEIC--RSLVYFFVRLKDFKGAYKMIEDLQKMNF 488
+ D+ + R Y ++C G+ +I +L++ + + A + +++L K N
Sbjct: 353 YSQQGDHEMAFRFYEDMVCN---GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSEE 541
+P ++ ++A++ G KN G + K M + P+ QTF+ L++ C++E+
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 86/174 (49%), Gaps = 7/174 (4%)
Query: 372 VKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
+K++N+ + P++ ++ LI C +K+ A + +M +T ++++
Sbjct: 293 LKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLING 352
Query: 432 CEETYDYILVHRIY-SIICRHHLGLNNEIC--RSLVYFFVRLKDFKGAYKMIEDLQKMNF 488
+ D+ + R Y ++C G+ +I +L++ + + A + +++L K N
Sbjct: 353 YSQQGDHEMAFRFYEDMVCN---GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENL 409
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSEE 541
+P ++ ++A++ G KN G + K M + P+ QTF+ L++ C++E+
Sbjct: 410 VPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNED 463
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 118/260 (45%), Gaps = 34/260 (13%)
Query: 516 KHMREANVKPDSQTFSYLITNCQ--SEEDIIK-YYEELKLSGIQATKQIFMALINAYAAC 572
+ M +NV P + TF+ +I +C S I K + +SG + AL+ Y+ C
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 573 GEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVI 632
G+ E A+QV +P K + S L+S + EA+ ++ +++++G + +
Sbjct: 156 GDMEGARQVF--DRMPEKSIVAWNS-LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFV 212
Query: 633 SLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQ-----NNHLSSAIV-LFK 686
SL+ Q WV +Y + N L +A++ L+
Sbjct: 213 SLLSACAQTGAVSLGS------------WVH------QYIISEGLDLNVKLGTALINLYS 254
Query: 687 QLKDKFESDEI--QLEVLFDSVFSVIASSKSTHL--QFGLDLLWAIKDEIGLIPSRQSLD 742
+ D ++ E+ +++ + ++ + S+ TH Q ++L ++D+ G IP+ +
Sbjct: 255 RCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFV 314
Query: 743 FLLSACANAGDLNNARLIWR 762
+LSACA+AG + R +++
Sbjct: 315 AVLSACAHAGLVEEGRSVYK 334
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
Query: 453 LGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGL 512
GL+ + +LV F+ + D +GA ++ + + + + + +N+++ G+ + +
Sbjct: 138 FGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA----WNSLVSGFEQNGLADEAI 193
Query: 513 SVLKHMREANVKPDSQTFSYLITNCQSEEDII--KYYEELKLS-GIQATKQIFMALINAY 569
V MRE+ +PDS TF L++ C + + + +S G+ ++ ALIN Y
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 570 AACGEFEKAKQV 581
+ CG+ KA++V
Sbjct: 254 SRCGDVGKAREV 265
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
L++ D A ++ +DL + P +NAI+ GY R + L + +M+ A
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 523 VKPDSQTFSYLITNCQ--SEEDIIKY-YEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
V PDS TF +L+ C S + ++ + ++ G A + LI YA C A+
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 580 QVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELT 639
V +P + + ++ +SA A + + EAL I+ +++K + + A++S++ T
Sbjct: 175 TVFEGLPLPERTIVSWTAI-VSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT 233
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 15/268 (5%)
Query: 373 KVENLHEVLDVLPS--MSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH 430
K E + VL+ +P+ + + +I L + + A+ + +M ++G LS++ + S++
Sbjct: 295 KEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 431 ICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIP 490
C + + L ++ + RH L+ SL+ + + + + E + + + +
Sbjct: 355 SCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVS 414
Query: 491 TAAMYNAIMGGYFREKNISGGLSVLKHMREANVKP-DSQTFSYLITNCQSEE--DIIKYY 547
+NAI+ GY + ++ L + + M+ V+ DS T L+ C S + K
Sbjct: 415 ----WNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLI 470
Query: 548 EELKL-SGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASH 606
+ + S I+ + AL++ Y+ CG E A Q DS + +LI+ H
Sbjct: 471 HCIVIRSFIRPCSLVDTALVDMYSKCGYLE-AAQRCFDSISWKDVVSW--GILIAGYGFH 527
Query: 607 KQLPEALLIYEEVKKAGLGVEPKAVISL 634
+ AL IY E +G+ EP VI L
Sbjct: 528 GKGDIALEIYSEFLHSGM--EPNHVIFL 553
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 78/150 (52%), Gaps = 8/150 (5%)
Query: 495 YNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI----TNCQSEEDIIKYYEEL 550
+N ++ GY N+S L +L MR ++PD QTF + T C E + + + +
Sbjct: 213 WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIV 272
Query: 551 KLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLP 610
K +G + ALI Y CG+ E+A VL++ +P+K + +V+IS L +
Sbjct: 273 K-TGFDVDMHLKTALITMYLKCGK-EEASYRVLET-IPNKDV-VCWTVMISGLMRLGRAE 328
Query: 611 EALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
+AL+++ E+ ++G + +A+ S++ Q
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQ 358
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 386 SMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEET-YDYIL--V 441
S +SY +I + D+AV+ +M E G + + S+++ C+ D L
Sbjct: 589 SCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMT 648
Query: 442 HRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGG 501
H + S+ L L+ +L+ F + D K AY + +L ++ +P ++YN+++ G
Sbjct: 649 HEMKSM----ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISG 704
Query: 502 YFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI---IKYYEELKLSGIQAT 558
+ + + + K M + D T++ +I + +I Y EL GI
Sbjct: 705 FRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPD 764
Query: 559 KQIFMALINAYAACGEFEKAKQVVLDSE----VPHKYLHEIKSVLISALASHKQLPEALL 614
+ + M L+N + G+F KA +++ + + P+ L+ S +I+ L EA
Sbjct: 765 EILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY---STVIAGHHREGNLNEAFR 821
Query: 615 IYEEVKKAGL 624
+++E+ + G+
Sbjct: 822 LHDEMLEKGI 831
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%)
Query: 381 LDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYIL 440
L ++P++S Y LI L K+D A+D+ KM G + +++ + + L
Sbjct: 689 LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINL 748
Query: 441 VHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
+YS + + + + LV + F A KM+E+++K + P +Y+ ++
Sbjct: 749 ASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIA 808
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT 535
G+ RE N++ + M E + D F+ L++
Sbjct: 809 GHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/451 (16%), Positives = 174/451 (38%), Gaps = 58/451 (12%)
Query: 355 IASFAVSIPNLAAEDII---VKVENLHEVLDVL---------PSMSSYKKLIQYCCGLLK 402
+ F + + +AA ++ K L + LD+ P + ++++ C ++
Sbjct: 336 MVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNME 395
Query: 403 VDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRS 462
++ A++ +M S+ ++ +++ C + I++ + + +C
Sbjct: 396 MEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNK 454
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
+ F + A ++ +++ P YN +M + R KN+ S+ M E
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 523 VKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
++P++ T+S LI + E++ ++ S +A + I+ +IN G+ KAK
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 580 QVVLDSEVPHKYLHEIKSV--LISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEE 637
+++ + +Y S +I A+ Y E+ + G SLI
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLIN- 633
Query: 638 LTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDKFESDEI 697
+C ++N + A+ + ++K S E+
Sbjct: 634 --------------------------------GFC-KSNRMDLALEMTHEMK----SMEL 656
Query: 698 QLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLNNA 757
+L++ + K ++ L + E+GL+P+ + L+S N G ++ A
Sbjct: 657 KLDLPAYGAL-IDGFCKKNDMKTAYTLFSELP-ELGLMPNVSVYNSLISGFRNLGKMDAA 714
Query: 758 RLIWREYEVAGFPYNVLSYLRMYQALLASGD 788
++++ G ++ +Y M LL G+
Sbjct: 715 IDLYKKMVNDGISCDLFTYTTMIDGLLKDGN 745
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/370 (18%), Positives = 155/370 (41%), Gaps = 52/370 (14%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
+ +F R A ++ + K+ + P+ N+++ G+ IS ++++ M E
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 523 VKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGE----- 574
+PD+ TF+ L+ + + E + + G Q + A+IN GE
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 575 --FEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVI 632
K ++ ++++V I + +I L +K + +A ++ +++ G+ +
Sbjct: 236 NLLNKMEKGKIEADVV------IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 633 SLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDKF 692
LI L W D R++ ++ N ++ +V F L D F
Sbjct: 290 PLISCLCNYGR-----------------WSDAS-RLLSDMLEKN-INPDLVFFNALIDAF 330
Query: 693 --ESDEIQLEVLFDSVFS-------VIASS-------KSTHLQFGLDLLWAIKDEIGLIP 736
E ++ E L+D + V+A + K ++ G+++ + GL+
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVG 389
Query: 737 SRQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLML 796
+ + L+ A D +NA++++++ G ++++Y + L +G+ +A ++
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 797 KKIPKDDMEV 806
+ + K DM++
Sbjct: 450 EYMQKRDMKL 459
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/432 (19%), Positives = 179/432 (41%), Gaps = 34/432 (7%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHIC----EETYDYIL 440
PS+ + L+ C ++ AV +VD+M E G+ T +++H + + L
Sbjct: 143 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 202
Query: 441 VHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
V R+ C+ L + L + + A ++ ++K +YN I+
Sbjct: 203 VERMVVKGCQPDLVTYGAVINGL----CKRGEPDLALNLLNKMEKGKIEADVVIYNTIID 258
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT---NCQSEEDIIKYYEELKLSGIQA 557
G + K++ + M +KPD T++ LI+ N D + ++ I
Sbjct: 259 GLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP 318
Query: 558 TKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHE---IKSVLISALASHKQLPEALL 614
F ALI+A+ G+ +A++ + D V K+ + LI +K++ E +
Sbjct: 319 DLVFFNALIDAFVKEGKLVEAEK-LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 615 IYEEVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCF-RVIKYCV 673
++ E+ + GL +LI Q DG ++ Y +
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS------DGVHPDIMTYNI 431
Query: 674 ------QNNHLSSAIVLFKQLKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWA 727
N ++ +A+V+F+ ++ + +++L+++ + + A K+ ++ G DL +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKR----DMKLDIVTYTTM-IEALCKAGKVEDGWDLFCS 486
Query: 728 IKDEIGLIPSRQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASG 787
+ + G+ P+ + ++S G A ++ E + G N +Y + +A L G
Sbjct: 487 LSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Query: 788 DHRSANLMLKKI 799
D ++ ++K++
Sbjct: 546 DEAASAELIKEM 557
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 34/255 (13%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDY-ILVHRIYSI 447
SY LI CCG K+D A +D+M + G + Y Y IL+ ++++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLK-------------PDNYTYSILICGLFNM 588
Query: 448 I-----------CRHHLGLNNEICRS-LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMY 495
C+ + L + S ++ + + + + +++ N P +Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 496 NAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN---CQSEEDIIKYYEELKL 552
N ++ Y R +S L + + M+ + P+S T++ LI E+ +EE+++
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 553 SGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK---SVLISALASHKQL 609
G++ + ALI+ Y G+ K + L E+ K +H K +V+I A +
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVE--CLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 610 PEALLIYEEVKKAGL 624
EA + E+++ G+
Sbjct: 767 TEASRLLNEMREKGI 781
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 10/250 (4%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P LI C K A+++ + GF + T+ ++LH E RI
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
I ++ +L+ K A+ ++++ K P Y+ ++ G F
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQI 561
+ + + + PD T+S +I C + E+ ++++E+ +Q +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 562 FMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSV---LISALASHKQLPEALLIYEE 618
+ LI AY G A + L ++ HK + + LI ++ ++ EA L++EE
Sbjct: 648 YNHLIRAYCRSGRLSMALE--LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 619 VKKAGLGVEP 628
++ GL EP
Sbjct: 706 MRMEGL--EP 713
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 110/255 (43%), Gaps = 34/255 (13%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDY-ILVHRIYSI 447
SY LI CCG K+D A +D+M + G + Y Y IL+ ++++
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLK-------------PDNYTYSILICGLFNM 588
Query: 448 I-----------CRHHLGLNNEICRS-LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMY 495
C+ + L + S ++ + + + + +++ N P +Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 496 NAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN---CQSEEDIIKYYEELKL 552
N ++ Y R +S L + + M+ + P+S T++ LI E+ +EE+++
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRM 708
Query: 553 SGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK---SVLISALASHKQL 609
G++ + ALI+ Y G+ K + L E+ K +H K +V+I A +
Sbjct: 709 EGLEPNVFHYTALIDGYGKLGQMVKVE--CLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 610 PEALLIYEEVKKAGL 624
EA + E+++ G+
Sbjct: 767 TEASRLLNEMREKGI 781
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 101/250 (40%), Gaps = 10/250 (4%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P LI C K A+++ + GF + T+ ++LH E RI
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
I ++ +L+ K A+ ++++ K P Y+ ++ G F
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQI 561
+ + + + PD T+S +I C + E+ ++++E+ +Q +
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVV 647
Query: 562 FMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSV---LISALASHKQLPEALLIYEE 618
+ LI AY G A + L ++ HK + + LI ++ ++ EA L++EE
Sbjct: 648 YNHLIRAYCRSGRLSMALE--LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 619 VKKAGLGVEP 628
++ GL EP
Sbjct: 706 MRMEGL--EP 713
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 114/286 (39%), Gaps = 47/286 (16%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAG----FTLSTQVLQSILHICEETYDYILVHRI 444
+Y LI C ++ A++++ KM + G F + V+QS+ D +++ R+
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTR--SNKIDSVMLLRL 256
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMI------------------------ 480
Y I R L L+ ++ ++ F + D A +++
Sbjct: 257 YKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALAD 316
Query: 481 -----------EDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQT 529
E+L++ P YNA++ GY + + S++ M + V PD T
Sbjct: 317 SGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHT 376
Query: 530 FSYLI---TNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLD-S 585
+S LI N E +E++ +Q +F L+ + GE++K QV+ +
Sbjct: 377 YSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMK 436
Query: 586 EVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAV 631
+ K + +V+I L A+ ++ + G+EP V
Sbjct: 437 SIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSE--GIEPDRV 480
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 476 AYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI- 534
A +M E +++ +P A YN ++ Y ++ +L M+ + P+ T + L+
Sbjct: 498 AEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVD 557
Query: 535 --TNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQV--VLDSEVPHK 590
D I+ EE+K G++ + ++ ALINAYA G E+A V+ S+
Sbjct: 558 VYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKP 617
Query: 591 YLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAV 631
L + S LI+A ++ EA + + +K+ GV+P V
Sbjct: 618 SLLALNS-LINAFGEDRRDAEAFAVLQYMKEN--GVKPDVV 655
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 440 LVHRIYSIICRHHLGLNNEICRS-LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAI 498
L + + S + +H+L + E+ S L++ R + A+ + QK P YNA+
Sbjct: 149 LAYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLS---QKQTLTPLT--YNAL 203
Query: 499 MGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI-----IKYYEELKLS 553
+G R +I L+++ MR+ + D +S +I + I ++ Y+E++
Sbjct: 204 IGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 263
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSV-LISALASHKQLPEA 612
++ Q+ +I +A G+ KA Q++ ++ V +ISALA + EA
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEA 323
Query: 613 LLIYEEVKKAGLGVEPKAVISLIE 636
++EE++++G+ +A +L++
Sbjct: 324 EALFEELRQSGIKPRTRAYNALLK 347
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 13/271 (4%)
Query: 321 IFQALGRLQLESDAENLLLDLRASDQDP--DDISNFIASFAVSIPNLAAEDIIVKVENLH 378
+ A G+ +AE+L + L S P D + I ++ ++ AE ++V+++N H
Sbjct: 183 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN-H 241
Query: 379 EVLDVLPSMSSYKKLIQYCCGLLK----VDTAVDIVDKMCEAGFTLSTQVLQSILHICEE 434
V ++ Y I+ GL+K + A+D+ +M +T+ ++++ +
Sbjct: 242 HVSPKTIGVTVYNAYIE---GLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 298
Query: 435 TYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAM 494
+ ++Y + H N +LV F R + A ++ E LQ+ P +
Sbjct: 299 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 495 YNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI---TNCQSEEDIIKYYEELK 551
YNA+M Y R G + M+ +PD +++ ++ D +EE+K
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 552 LSGIQATKQIFMALINAYAACGEFEKAKQVV 582
GI T + M L++AY+ + K + +V
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 449
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/344 (19%), Positives = 144/344 (41%), Gaps = 44/344 (12%)
Query: 320 NIFQALGRLQLESDAENLLLDLRASDQDP--DDISNFIASFAVS-IPNLAAE--DIIVKV 374
N F G ++ DA LL ++ +P + I + ++ P ++E D++++
Sbjct: 123 NAFSESGNME---DAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEE 179
Query: 375 ENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEE 434
N+ DV P++ ++ L+Q C KV+ A ++V KM E G T +I +
Sbjct: 180 GNV----DVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQ 235
Query: 435 TYDYILVHR--IYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTA 492
+ + + ++ + N C +V + R + + + +++M
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANL 295
Query: 493 AMYNAIMGGY--------------------FREK-----NISGGLSVLKHMREANVKPDS 527
++N+++ G+ F E+ N + VL M+E NVK D
Sbjct: 296 VVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 528 QTFSYLITNCQSE---EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLD 584
T+S ++ S E + ++E+ +G++ + L Y E +KA++++
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 585 SEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEP 628
V + I + +IS S+ + +A+ ++ ++ K GV P
Sbjct: 416 LIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK--FGVSP 457
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 21/286 (7%)
Query: 483 LQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEED 542
K+ PT + +N +M ++I G VL+ ++E+ + D + ++ LI++C
Sbjct: 458 FTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGK 517
Query: 543 IIKYYE---ELKLSGIQATKQIFMALINAYAACGEFEKAKQV--VLDSE--VPHKYLHEI 595
+ +E ++ SG++A F ALI+ A G+ KA +L S+ P + +
Sbjct: 518 VDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVF-- 575
Query: 596 KSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXX 655
+ LISA + A + E+K ++P IS+ +
Sbjct: 576 -NALISACGQSGAVDRAFDVLAEMKAETHPIDPDH-ISIGALMKACCNAGQVERAKEVYQ 633
Query: 656 XXXDYWVDGCFRV----IKYCVQNNHLSSAIVLFKQLKDKFESDEIQLEVLFDSVFSVIA 711
Y + G V + C ++ A ++K +K+K D EV F ++ V
Sbjct: 634 MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK---DVTPDEVFFSALIDVAG 690
Query: 712 SSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLNNA 757
+K FG +L K + G+ S L+ AC NA D A
Sbjct: 691 HAKMLDEAFG--ILQDAKSQ-GIRLGTISYSSLMGACCNAKDWKKA 733
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 102/246 (41%), Gaps = 6/246 (2%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P+MS++ L+ C ++ A ++ + E+G T ++ +++ C ++ + +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + N +L+ R A+ L+ N P ++NA++ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 505 EKNISGGLSVLKHMREAN--VKPDSQTFSYLITNCQSE---EDIIKYYEELKLSGIQATK 559
+ VL M+ + PD + L+ C + E + Y+ + GI+ T
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 560 QIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEI-KSVLISALASHKQLPEALLIYEE 618
+++ +N+ + G+++ A + D + E+ S LI K L EA I ++
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 619 VKKAGL 624
K G+
Sbjct: 705 AKSQGI 710
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/231 (18%), Positives = 103/231 (44%), Gaps = 37/231 (16%)
Query: 414 CEAGFTL-STQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKD 472
C G+ S+ + +++LH C Y +++S + + +C+S+V + +L
Sbjct: 672 CVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGF 731
Query: 473 FKGAYKMIEDLQKMNF-IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFS 531
+ A++++ + F + MY I+ Y ++K SV+ ++R++ PD +T++
Sbjct: 732 PETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 532 YLITNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQV--VLDSEVPH 589
+L++AYA CG +E+A+ + + + P
Sbjct: 792 --------------------------------SLMSAYAQCGCYERARAIFNTMMRDGPS 819
Query: 590 KYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
+ I ++L+ AL +L E ++ EE++ G + +++ +++ +
Sbjct: 820 PTVESI-NILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFAR 869
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 119/275 (43%), Gaps = 19/275 (6%)
Query: 369 DIIVKVENLHEVLDV---------LPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFT 419
D + N+ EV + LP++ Y+ +I+ C +V A +V +M EA F
Sbjct: 865 DAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFK 924
Query: 420 LSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKM 479
+ + S+L + DY ++Y I L + +L+ + R + + Y +
Sbjct: 925 VELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLL 984
Query: 480 IEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT---N 536
++ ++ + P Y +++ + ++K + + + + +K D + ++ +
Sbjct: 985 MQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRD 1044
Query: 537 CQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQV---VLDSEVPHKYLH 593
S+ K + +K +GI+ T L+ +Y++ G ++A++V + D+EV L
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLP 1104
Query: 594 EIKSVLISALASHKQLPEALLIYEEVKKAGLGVEP 628
S +I A K + E+KK GL EP
Sbjct: 1105 --YSSVIDAYLRSKDYNSGIERLLEMKKEGL--EP 1135
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 13/271 (4%)
Query: 321 IFQALGRLQLESDAENLLLDLRASDQDP--DDISNFIASFAVSIPNLAAEDIIVKVENLH 378
+ A G+ +AE+L + L S P D + I ++ ++ AE ++V+++N H
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQN-H 219
Query: 379 EVLDVLPSMSSYKKLIQYCCGLLK----VDTAVDIVDKMCEAGFTLSTQVLQSILHICEE 434
V ++ Y I+ GL+K + A+D+ +M +T+ ++++ +
Sbjct: 220 HVSPKTIGVTVYNAYIE---GLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 276
Query: 435 TYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAM 494
+ ++Y + H N +LV F R + A ++ E LQ+ P +
Sbjct: 277 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 495 YNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI---TNCQSEEDIIKYYEELK 551
YNA+M Y R G + M+ +PD +++ ++ D +EE+K
Sbjct: 337 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Query: 552 LSGIQATKQIFMALINAYAACGEFEKAKQVV 582
GI T + M L++AY+ + K + +V
Sbjct: 397 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIV 427
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/437 (19%), Positives = 167/437 (38%), Gaps = 52/437 (11%)
Query: 385 PSMSSYKKLIQYCCGLLK---VDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILV 441
PS+ ++ L++ GL K V+ A +++ +M + GF +
Sbjct: 282 PSLITFNTLLK---GLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 442 HRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGG 501
+Y + +N C L+ + + A +++ +P +YN ++ G
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 502 YFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQ--SEEDIIKYYEELKLSGIQAT 558
Y R+ ++ G ++ M + +KPD ++ LI C+ E+ K ++KL G+ +
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 559 KQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK-SVLISALASHKQLPEALLIYE 617
+ + LI Y EF+K ++ + E + + LI+ L +L EA ++
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 618 EVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNH 677
+++ GV PK I + +DG C
Sbjct: 519 DMEDR--GVSPKVRI-------------------------YNMLIDG-------CCSKGK 544
Query: 678 LSSAIVLFKQ-LKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIP 736
+ A K+ LK E + + L D + S + L DLL I + GL P
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGL------SMTGKLSEAEDLLLEISRK-GLKP 597
Query: 737 SRQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLML 796
+ + L+S AG++ ++ E + +G + +Y + G + L
Sbjct: 598 DVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFG 657
Query: 797 KKIPKDDMEVCSVILSC 813
+ K D+ V + +L C
Sbjct: 658 EMSLKPDLLVYNGVLHC 674
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 111/259 (42%), Gaps = 28/259 (10%)
Query: 382 DVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSIL-HIC-------- 432
D PS Y K IQ L V +++ ++M S + ++ +C
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 433 EETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTA 492
E+ +D +L R+ + ++ +L+ + + + + ++K+ E ++ + P+
Sbjct: 234 EQLFDEMLARRLLPSLITYN---------TLIDGYCKAGNPEKSFKVRERMKADHIEPSL 284
Query: 493 AMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEED---IIKYYEE 549
+N ++ G F+ + +VLK M++ PD+ TFS L S E + YE
Sbjct: 285 ITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET 344
Query: 550 LKLSGIQATKQIFMALINAYAACGEFEKAKQV----VLDSEVPHKYLHEIKSVLISALAS 605
SG++ L+NA G+ EKA+++ + VP++ ++ + +I
Sbjct: 345 AVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIY---NTMIDGYCR 401
Query: 606 HKQLPEALLIYEEVKKAGL 624
L A + E ++K G+
Sbjct: 402 KGDLVGARMKIEAMEKQGM 420
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 106/243 (43%), Gaps = 9/243 (3%)
Query: 351 ISNFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIV 410
+ +F A + + + ++ + + L E L + P + +Y +I+ C +D + I
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 411 DKMCEAGFTLSTQVLQSILHICEETYD---YILVHRIYSIICRHHLGLNNEICRSLVYFF 467
+++ + GF ++L EE Y ++ RI+ ++ +L N S V
Sbjct: 217 EELEKNGFEPDLISFNTLL---EEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGL 273
Query: 468 VRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDS 527
R K F A +I+ ++ P YNA++ Y + N+ + M+E + PD+
Sbjct: 274 TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDT 333
Query: 528 QTFSYLITNCQSEEDI---IKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLD 584
T+ LI + D+ ++ EE + + ++ ++ G+ ++A Q+V +
Sbjct: 334 VTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKN 393
Query: 585 SEV 587
++
Sbjct: 394 GKL 396
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 115/288 (39%), Gaps = 47/288 (16%)
Query: 332 SDAENLLLDLRASDQDPDDISNFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYK 391
+DA L D+ S P I +F + ++I L + ++ + E+L + + S+
Sbjct: 61 NDALTLFCDMAESHPLPS-IVDF-SRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 392 KLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRH 451
LI C ++ A+ + KM + GF S S
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGS------------------------ 154
Query: 452 HLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGG 511
LV F + F A +++ + + + P +YN I+ + ++
Sbjct: 155 -----------LVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTA 203
Query: 512 LSVLKHMREANVKPDSQTFSYLIT---NCQSEEDIIKYYEELKLSGIQATKQIFMALINA 568
L VLKHM++ ++PD T++ LIT + + + ++ GI F ALI+
Sbjct: 204 LDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 569 YAACGEFEKAK----QVVLDSEVPHKYLHEIKSVLISALASHKQLPEA 612
Y G+ +AK +++ S P+ + + LI+ L H L EA
Sbjct: 264 YGKEGQLLEAKKQYNEMIQRSVNPNIVTY---NSLINGLCIHGLLDEA 308
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 135/322 (41%), Gaps = 24/322 (7%)
Query: 446 SIICRHHLGLNNE-----ICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
++ICRH L N + L+ +V+ A+++ + + + N I M +A
Sbjct: 81 NLICRH-LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISA--- 136
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQATKQ 560
Y + K L +L M NV+P+ T+S ++ +C D+ + + G+++
Sbjct: 137 -YSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVF 195
Query: 561 IFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVK 620
+ ALI+ +A GE E A V D V + + + +I A + + AL +++ +K
Sbjct: 196 VRSALIDVFAKLGEPEDALS-VFDEMVTGDAI--VWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 621 KAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSS 680
+AG E + S++ T + V YC + L
Sbjct: 253 RAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYC-KCGSLED 311
Query: 681 AIVLFKQLKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQS 740
A+ +F Q+K E D I + + +++ + Q L L +K G P+ +
Sbjct: 312 ALRVFNQMK---ERDVITWSTMISGL------AQNGYSQEALKLFERMKSS-GTKPNYIT 361
Query: 741 LDFLLSACANAGDLNNARLIWR 762
+ +L AC++AG L + +R
Sbjct: 362 IVGVLFACSHAGLLEDGWYYFR 383
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 93/204 (45%), Gaps = 5/204 (2%)
Query: 383 VLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVH 442
V PS +Y LI C +V+ A+ ++++M E GF S+++ + Y +
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 443 RIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGY 502
++ + + +++ + ++ F + A + +++ P YNA+M G
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 503 FREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI----IKYYEELKLSGIQAT 558
+ I+ S+L+ M E + D + + +I N + + I+ +E +K SGI+
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHN-IILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Query: 559 KQIFMALINAYAACGEFEKAKQVV 582
+ L+ +A G FE+A +++
Sbjct: 584 GVTYNTLLGCFAHAGMFEEAARMM 607
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/533 (19%), Positives = 222/533 (41%), Gaps = 83/533 (15%)
Query: 147 LGSKATVEVFGHLGRETGLKEYNKLIQLCVKKARGADDEDIAIEEL----------SKAF 196
L ++E+F G + G + + Q+ + K GA+ E I+ L K
Sbjct: 89 LNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKL-GANGEFKTIDRLLIQMKDEGIVFKES 147
Query: 197 HLLKLMREY---GFPLGEQTYRPILQ----YLIDLGMVREFELFSDVIKAENASSTSRLG 249
+ +MR+Y GFP QT R +L+ Y + + + + +++ + N +
Sbjct: 148 LFISIMRDYDKAGFP--GQTTRLMLEMRNVYSCE-PTFKSYNVVLEILVSGNCHKVAANV 204
Query: 250 YYEMM----------------LWLGVNHEE----MIRDICEYITVEDSEDTTALRESYLL 289
+Y+M+ + VN + ++RD+ ++ V +S + ++ +
Sbjct: 205 FYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNS----VIYQTLIH 260
Query: 290 ALCESDRKTQILDVLKNIDITK-LTSVESRSNIFQALGRLQLESDAENLLLDLRASDQDP 348
+L + +R + L +L+ + + + E+ +++ L + ++A ++ + P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320
Query: 349 DDIS-NFIASFAVSIPNL-AAEDIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTA 406
DDI+ ++ + I + AA+D+ ++ P + + LI ++D A
Sbjct: 321 DDITYGYLMNGLCKIGRVDAAKDLFYRIPK--------PEIVIFNTLIHGFVTHGRLDDA 372
Query: 407 VDIVDKMCEAGFTLSTQVLQSILHICEETYDYI---LVHRIYSIICRHHLGLNNEICRSL 463
++ M S ++ + Y Y LV ++ H + N+ C+
Sbjct: 373 KAVLSDM-----VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL--HDM--RNKGCKPN 423
Query: 464 VY-------FFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLK 516
VY F +L AY ++ ++ P +N ++ + +E I + + +
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFR 483
Query: 517 HMREANVKPDSQTFSYLITN-CQSEEDIIKY----YEELKLSGIQATKQIFMALINAYAA 571
M KPD TF+ LI+ C+ +E IK+ ++ G+ A + LINA+
Sbjct: 484 EMPRKGCKPDVYTFNSLISGLCEVDE--IKHALWLLRDMISEGVVANTVTYNTLINAFLR 541
Query: 572 CGEFEKAKQVVLDSEVPHKYLHEIK-SVLISALASHKQLPEALLIYEEVKKAG 623
GE ++A+++V + L EI + LI L ++ +A ++E++ + G
Sbjct: 542 RGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 110/252 (43%), Gaps = 13/252 (5%)
Query: 389 SYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEE-TYDYILVHRIYSI 447
S+ +I C + VD+ M + L S+L C E Y LV I+
Sbjct: 218 SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGF 277
Query: 448 ICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKN 507
RH + + + + + R + + + E + + M+++++ GY +
Sbjct: 278 SFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSK----VRDVVMWSSMISGYAETGD 333
Query: 508 ISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKY----YEELKLSGIQATKQIFM 563
S +++L MR+ ++ +S T +++ C + ++ + + ++ G + +
Sbjct: 334 CSEVMNLLNQMRKEGIEANSVTLLAIVSAC-TNSTLLSFASTVHSQILKCGFMSHILLGN 392
Query: 564 ALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAG 623
ALI+ YA CG A++V E+ K L S +I+A H EAL I++ + K G
Sbjct: 393 ALIDMYAKCGSLSAAREVFY--ELTEKDLVSWSS-MINAYGLHGHGSEALEIFKGMIKGG 449
Query: 624 LGVEPKAVISLI 635
V+ A ++++
Sbjct: 450 HEVDDMAFLAIL 461
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 389 SYKKLIQYCC--GLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYS 446
SY +I CC GLL A+ ++ +M GF ++++ S+L +C V R++
Sbjct: 115 SYCSIINSCCQDGLLY--EAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMF- 171
Query: 447 IICRHHLGLNNE-------ICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIM 499
H L L +E + +LV +++ D A+ + + ++ N + + A++
Sbjct: 172 ----HALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVS----WTAMI 223
Query: 500 GGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC---QSEEDIIKYYEELKL-SGI 555
G +N G+ + + M+ N++P+ T ++ C ++K G
Sbjct: 224 SGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGC 283
Query: 556 QATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLI 615
A +++ A + Y CG ++ + S+V + S +IS A E + +
Sbjct: 284 HADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMW---SSMISGYAETGDCSEVMNL 340
Query: 616 YEEVKKAGLGVEPKAVISLIEELTQ 640
+++K G+ +++++ T
Sbjct: 341 LNQMRKEGIEANSVTLLAIVSACTN 365
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 106/250 (42%), Gaps = 18/250 (7%)
Query: 398 CGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNN 457
C K++ A+ +++ M E + V +++ +CE ++YSI L
Sbjct: 70 CANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGV 129
Query: 458 EICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKH 517
E+ + + FVR + A+ + + + N +N ++GGY ++ + +
Sbjct: 130 ELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFS----WNVLVGGYAKQGYFDEAMCLYHR 185
Query: 518 M-REANVKPDSQTFSYLITNCQSEEDIIKYYE---ELKLSGIQATKQIFMALINAYAACG 573
M VKPD TF ++ C D+ + E + G + + ALI Y CG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 574 EFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEP----- 628
+ + A+ +L +P + + + +IS + E L ++ ++ GL V+P
Sbjct: 246 DVKSAR--LLFDRMPRRDIISWNA-MISGYFENGMCHEGLELFFAMR--GLSVDPDLMTL 300
Query: 629 KAVISLIEEL 638
+VIS E L
Sbjct: 301 TSVISACELL 310
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/263 (19%), Positives = 109/263 (41%), Gaps = 14/263 (5%)
Query: 386 SMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIY 445
S ++Y ++IQY K++ A K E+G + TQ +++ + IY
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 446 SIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFRE 505
+ + L+ ++ + A+K+ + +++ P+ +++++++ +
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 506 KNISGGLSVLKHMREANVKPDSQTFSYLI---TNCQSEEDIIKYYEELKLSGIQATKQIF 562
+ + V M+ +P + F LI + ++ ++E+K SG + ++
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 563 MALINAYAACGEFEKAKQVVLDSE------VPHKYLHEIKSVLISALASHKQLPEALLIY 616
+I ++A G+ E A V D E P Y S L+ A Q+ A+ IY
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY-----SCLLEMHAGSGQVDSAMKIY 476
Query: 617 EEVKKAGLGVEPKAVISLIEELT 639
+ AGL + ISL+ L
Sbjct: 477 NSMTNAGLRPGLSSYISLLTLLA 499
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 169/434 (38%), Gaps = 57/434 (13%)
Query: 192 LSKAFHLLKLMREYGFPLGEQTYRPILQYLIDLGMVRE-FELFSDVIKAENASSTSRLGY 250
L +A + L+ MRE+GF L +Y ++ L+ E E++ +I S Y
Sbjct: 169 LKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQT--Y 226
Query: 251 YEMMLWLGVNHEEMIRDICEYITVEDSEDTTALRES-YLLALC-----ESDRKTQILDVL 304
+M+ LG RDI + + +T L+ + Y +C + + + ++L
Sbjct: 227 SSLMVGLGKR-----RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 305 KNID-----------------ITKLTSVESRSNIFQAL--GRLQLESDAENLLLDLRASD 345
K +D + ++ +F+ + GR + + LLD + +
Sbjct: 282 KRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDN 341
Query: 346 QDPDDISNFIASFAVS--IPNLAAEDIIV----KVENLHEVLD---------VLPSMSSY 390
+D D + F + +P++ I+V K N E D +LP++ +Y
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 391 KKLIQYCCGLLKV---DTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSI 447
LI CGLL+V D A+++ M G + + ++ D + +
Sbjct: 402 NTLI---CGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 448 ICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKN 507
+ + N C + +Y + + A ++ L+ + +P + YN +M Y +
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 508 ISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI---IKYYEELKLSGIQATKQIFMA 564
I + +L M E +PD + LI + + K + +K ++ T +
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 565 LINAYAACGEFEKA 578
L+ G+ ++A
Sbjct: 579 LLAGLGKNGKIQEA 592
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 476 AYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT 535
A ++ E + P A+YN ++ G+ + ++ K M + V+PD +T+S L+
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV- 968
Query: 536 NC----QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEV---- 587
+C ++ + Y++ELK SG+ + +IN E+A +VL +E+
Sbjct: 969 DCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA--LVLFNEMKTSR 1026
Query: 588 ---PHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEP 628
P Y + + LI L + EA IY E+++AGL EP
Sbjct: 1027 GITPDLYTY---NSLILNLGIAGMVEEAGKIYNEIQRAGL--EP 1065
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 108/252 (42%), Gaps = 20/252 (7%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEE-----TYDY 438
PS+ ++ LI + C + A+DI++KM + G ++ +LH C+E +Y
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 439 ILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFK--GAYKMIEDLQKMNFIPTAAMYN 496
+ R+ S C + N + +L KD K A +++ L P YN
Sbjct: 402 L--ERMVSRGCYPDIVTYNTMLTALC------KDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 497 AIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSE---EDIIKYYEELKLS 553
++ G + + +L MR ++KPD+ T+S L+ E ++ IK++ E +
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQ-VVLDSEVPHKYLHEIKSVLISALASHKQLPEA 612
GI+ F +++ + ++A +V K ++LI LA EA
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 613 LLIYEEVKKAGL 624
L + E+ GL
Sbjct: 574 LELLNELCNKGL 585
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 14/176 (7%)
Query: 453 LGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGL 512
+G N + SL+ + + D + A + + + + + +N+I+ GY + + L
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVS----WNSIITGYSQNGDAEEAL 302
Query: 513 SVLKHMREANVKPDSQTF-----SYLITNCQSEEDIIKYYEELKLSGIQATKQIFMALIN 567
+ M + + PD TF + +I C I Y + +G I AL+N
Sbjct: 303 CMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAY--VSKTGFVKDAAIVCALVN 360
Query: 568 AYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAG 623
YA G+ E AK+ D E K +V+I LASH EAL I++ +++ G
Sbjct: 361 MYAKTGDAESAKKAFEDLE---KKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKG 413
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 143/340 (42%), Gaps = 46/340 (13%)
Query: 290 ALCESDRKTQILDVLKNIDITKLT-SVESRSNIFQALGRLQLESDAENLLLDLRASDQDP 348
ALC++ + + DV++++ + + +V S + + G +L + + D +
Sbjct: 232 ALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLID--GYCKLGGNGKMYKADAVLKEMVE 289
Query: 349 DDISNFIASFAVSIPNLAAED-IIVKVENLHEVLD--VLPSMSSYKKLIQYCCGLLKVDT 405
+D+S + +F + I +D + ++ E+LD V P++ SY LI C K+
Sbjct: 290 NDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISE 349
Query: 406 AVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVY 465
A+ + DKM AG V +++ TY+ +L+
Sbjct: 350 AISMRDKMVSAG------VQPNLI-----TYN------------------------ALIN 374
Query: 466 FFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKP 525
F + K A M ++ +PT MYN ++ Y + I G ++ + M + P
Sbjct: 375 GFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVP 434
Query: 526 DSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVV 582
D T++ LI C++ E K +++L G+ F L+ Y GE KA ++
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDL-VTFHILMEGYCRKGESRKAAMLL 493
Query: 583 LD-SEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKK 621
+ S++ K H ++++ L A + +++K
Sbjct: 494 KEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 21/255 (8%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVH-- 442
P +S+ +I D AV + +M +GF L+S+L C +T L
Sbjct: 334 PDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL--CAQTKPMALSQGM 391
Query: 443 RIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGY 502
+I+S I + + +C SL+ + D + + ED + + +N I+
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNN---ADSVSWNTILTAC 448
Query: 503 FREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYEELKL----SGIQAT 558
+ + L + K M + +PD T L+ C E +K ++ +G+
Sbjct: 449 LQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC-VEISSLKLGSQVHCYSLKTGLAPE 507
Query: 559 KQIFMALINAYAACGEFEKAKQVV--LDSEVPHKYLHEIKSVLISALASHKQLPEALLIY 616
+ I LI+ YA CG +A+++ +D+ + S LI A EAL+++
Sbjct: 508 QFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW-----STLIVGYAQSGFGEEALILF 562
Query: 617 EEVKKAGLGVEPKAV 631
+E+K A G+EP V
Sbjct: 563 KEMKSA--GIEPNHV 575
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 125/276 (45%), Gaps = 19/276 (6%)
Query: 365 LAAEDIIVKVENLHEVL---DVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLS 421
++ E ++ K + L + + ++P +Y LI+ C V +++ +M + +S
Sbjct: 357 MSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVIS 416
Query: 422 TQVLQSILHICEETYD----YILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAY 477
+++ + D Y +V + + CR N I +L+ F++ F A
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRP----NVVIYTTLIKTFLQNSRFGDAM 472
Query: 478 KMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC 537
++++++++ P YN+++ G + K + S L M E +KP++ T+ I+
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532
Query: 538 QSEEDII---KYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHE 594
+ KY +E++ G+ K + LIN Y G+ +A S V L +
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS-AYRSMVDQGILGD 591
Query: 595 IK--SVLISALASHKQLPEALLIYEEVKKAGLGVEP 628
K +VL++ L + ++ +A I+ E++ G G+ P
Sbjct: 592 AKTYTVLMNGLFKNDKVDDAEEIFREMR--GKGIAP 625
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 123/332 (37%), Gaps = 59/332 (17%)
Query: 454 GLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLS 513
GL NE C+ ++ + AY+ + D + A Y +M G F+ +
Sbjct: 562 GLINEYCKK-----GKVIEACSAYRSMVD---QGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 514 VLKHMREANVKPDSQTFSYLIT------NCQSEEDIIKYYEELKLSGIQATKQIFMALIN 567
+ + MR + PD ++ LI N Q I ++E+ G+ I+ L+
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSI---FDEMVEEGLTPNVIIYNMLLG 670
Query: 568 AYAACGEFEKAKQVVLDSEVPHKYLHE---IKSVLISALASHKQLPEALLIYEEVKKAGL 624
+ GE EKAK+++ E+ K LH +I L EA +++E+K GL
Sbjct: 671 GFCRSGEIEKAKELL--DEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGL 728
Query: 625 GVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVL 684
+ +L VDGC R+ N + AI +
Sbjct: 729 VPDSFVYTTL---------------------------VDGCCRL-------NDVERAITI 754
Query: 685 FKQLKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFL 744
F K S L + VF + T + L+ D G P+ + + +
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLN--RLMDGSFDRFGK-PNDVTYNIM 811
Query: 745 LSACANAGDLNNARLIWREYEVAGFPYNVLSY 776
+ G+L A+ ++ + + A V++Y
Sbjct: 812 IDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 16/220 (7%)
Query: 406 AVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVY 465
A+D+ KM E GF + L S+L C D + + +GL+ + L+
Sbjct: 217 AMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLIS 276
Query: 466 FFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKP 525
+ + D A ++ + K + + AM Y + S + M + V P
Sbjct: 277 MYGKCGDLDSARRVFNQMIKKDRVAWTAMITV----YSQNGKSSEAFKLFFEMEKTGVSP 332
Query: 526 DSQTFSYLITNCQS------EEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
D+ T S +++ C S + I + EL L Q + L++ Y CG E+A
Sbjct: 333 DAGTLSTVLSACGSVGALELGKQIETHASELSL---QHNIYVATGLVDMYGKCGRVEEAL 389
Query: 580 QVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEV 619
+V V ++ + +I+A A EALL+++ +
Sbjct: 390 RVFEAMPVKNE---ATWNAMITAYAHQGHAKEALLLFDRM 426
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 17/236 (7%)
Query: 403 VDTAVDIVDKMCEAGFTLS-TQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICR 461
+D+ + ++ + G +L+ ++ S+L C R++ +I + L N I
Sbjct: 72 LDSVITDLETSAQKGISLTEPEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISS 131
Query: 462 SLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREA 521
LV + + A+++ + + K + P A +N+++ GY +++ M E
Sbjct: 132 KLVRLYASCGYAEVAHEVFDRMSKRDSSPFA--WNSLISGYAELGQYEDAMALYFQMAED 189
Query: 522 NVKPDSQTFSYLITNC------QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEF 575
VKPD TF ++ C Q E I + +L G + AL+ YA CG+
Sbjct: 190 GVKPDRFTFPRVLKACGGIGSVQIGEAI---HRDLVKEGFGYDVYVLNALVVMYAKCGDI 246
Query: 576 EKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAV 631
KA+ V +PHK S+L L H L EAL I+ + + G+EP V
Sbjct: 247 VKARNVF--DMIPHKDYVSWNSMLTGYL-HHGLLHEALDIFRLMVQN--GIEPDKV 297
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 114/289 (39%), Gaps = 52/289 (17%)
Query: 375 ENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEE 434
E L E +D + +Y +I A+++V +M +G L S++ C
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 435 TYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAM 494
L ++++ + R + SLV + + F A + E + + +
Sbjct: 299 AGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS---- 353
Query: 495 YNAIMGGY---------------FREKNI-------SG---------GLSVLKHMREANV 523
+NA++ GY +EKNI SG GL + M+
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 524 KPDSQTFSYLITNCQ---SEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQ 580
+P FS I +C + + +Y+ +L G ++ ALI YA CG E+A+Q
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473
Query: 581 V-----VLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGL 624
V LDS + LI+AL H EA+ +YEE+ K G+
Sbjct: 474 VFRTMPCLDSVS--------WNALIAALGQHGHGAEAVDVYEEMLKKGI 514
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
L+ FV+ + A ++ +++ P YN +M GY + +S ++L M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 523 VKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAK 579
PD TF+ LI C + +D +K + + G+ A + L+ + G+ + A+
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 580 QVVLDSEVPHKYLHEIKS--VLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEE 637
+ + V H L ++ + +L+ L + +L +AL I+E+++K+ + + ++IE
Sbjct: 424 E-LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 638 LTQ 640
+ +
Sbjct: 483 MCK 485
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 378 HEVLDVLPSMSSYKKLIQYCCGL------LKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
VL VL M S +I Y + K + A I +M +G S Q IL
Sbjct: 159 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKT 218
Query: 432 CEETYDYILVHRIYSIIC---RHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNF 488
E + ++ + + L + ++ ++Y + + +++ A K+ +
Sbjct: 219 FVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 278
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT---NCQSEEDIIK 545
+ YN++M K +S + M+ ++++PD +++ LI + EE+ +
Sbjct: 279 PQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 335
Query: 546 YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQV 581
+EE+ +G++ T + + L++A+A G E+AK V
Sbjct: 336 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTV 371
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 154/378 (40%), Gaps = 70/378 (18%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
L+ + +L +F GA +++ L KM P Y A+M Y R + ++ + M+ +
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 523 VKPDSQTFSYLITNCQSEEDIIKYYEEL-------KLSGIQATKQIFMALINAYAACGEF 575
+P + T+ +I E D K EE+ K S ++ ++++ +I Y G +
Sbjct: 205 PEPSAITYQ-IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 576 EKAKQV---VLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVI 632
EKA++V ++ VP + + L+S S+K++ + IY++++++ ++P V
Sbjct: 264 EKARKVFSSMVGKGVPQSTV--TYNSLMSFETSYKEVSK---IYDQMQRS--DIQPDVVS 316
Query: 633 SLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDK- 691
+ +IK + A+ +F+++ D
Sbjct: 317 YAL--------------------------------LIKAYGRARREEEALSVFEEMLDAG 344
Query: 692 FESDEIQLEVLFD--SVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACA 749
+L D ++ ++ +K+ D ++ P S +LSA
Sbjct: 345 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF---------PDLWSYTTMLSAYV 395
Query: 750 NAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKIPKDDMEVCSV 809
NA D+ A ++ +V GF N+++Y + + + D + +K+ ++
Sbjct: 396 NASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 455
Query: 810 ILS--------CQNTYSA 819
IL+ C+N SA
Sbjct: 456 ILTTIMDASGRCKNFGSA 473
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 142/360 (39%), Gaps = 38/360 (10%)
Query: 195 AFHLLKLMREYGFPLGEQTYRPILQYLIDLGMVREFELFSDVIKAENASSTSRLGYYEMM 254
A L++ M ++G+P TY +++ L LG + + F + + + + + +
Sbjct: 160 AMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA----FTYS 215
Query: 255 LWLGVNHEEMIRD----ICEYITVEDSEDTTALRESYLLALCESDRKTQILDVLKNIDIT 310
L ++E D + + I V+ E L C+ R + + + +
Sbjct: 216 FLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAK 275
Query: 311 KL-TSVESRSNIFQAL---GRLQLESDAENLLLDLRASDQDPDDISNFIASFAVSIPNLA 366
+V S + + + L GR + +A +LL ++ D+ P + ++ + I +LA
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWE---EANSLLAEMDGGDRAPS-----VVTYNILINSLA 327
Query: 367 AEDIIVKVENLHEVLDVLPSMS-----------SYKKLIQYCCGLLKVDTAVDIVDKMCE 415
+ L VL MS SY +I C KVD V +D+M
Sbjct: 328 FHG------RTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIY 381
Query: 416 AGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKG 475
+ +I +CE I + ++ +S++ R +
Sbjct: 382 RRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFA 441
Query: 476 AYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREA-NVKPDSQTFSYLI 534
A++++ ++ + F P A Y+A++ G E +G + VL M E+ N KP F+ +I
Sbjct: 442 AFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMI 501
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
PS SY LI + A ++MC+ G S + S+L + D + I
Sbjct: 483 PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEI 542
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ ++ R + +L+ F + + A ++ + KM P+ YN +M Y R
Sbjct: 543 WKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYAR 602
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLI 534
+ +LK M N+KPDS T+S +I
Sbjct: 603 GGQDAKLPQLLKEMAALNLKPDSITYSTMI 632
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/221 (20%), Positives = 94/221 (42%), Gaps = 19/221 (8%)
Query: 384 LPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEA---GFTLSTQVLQSILHICEETYDYIL 440
L SS+ +I GL K + + + C+ G + S+L C++ +
Sbjct: 250 LKDHSSWVAMIS---GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 441 VHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
+++ ++ + + +C +LV + L + A + ++ + + A YN ++
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD----AVTYNTLIN 362
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIK------YYEELKLSG 554
G + + + K M ++PDS T + L+ C ++ + + Y +L G
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL---G 419
Query: 555 IQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEI 595
+ +I AL+N YA C + E A L++EV + L +
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNV 460
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 45/248 (18%)
Query: 383 VLPSMSSYKKLIQYCC--GLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYIL 440
+ P +Y LI CC G L + A + ++M AGF+ ++L + +++
Sbjct: 275 IAPDAYTYNTLIT-CCKRGSLHQE-AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKE 332
Query: 441 VHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
++ + + + + SL+ + R A ++ + + P Y ++
Sbjct: 333 AMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYL-------------------ITNCQSEE 541
G+ R + +S+ + MR A KP+ TF+ I C
Sbjct: 393 GFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 542 DIIKY-------------------YEELKLSGIQATKQIFMALINAYAACGEFEKAKQV- 581
DI+ + ++E+K +G ++ F LI+AY+ CG FE+A V
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 582 --VLDSEV 587
+LD+ V
Sbjct: 513 RRMLDAGV 520
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 474 KGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYL 533
K A K++ ++ F P+ YN+++ Y R+ + + + M E KPD T++ L
Sbjct: 331 KEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTL 390
Query: 534 ITNCQSE---EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHK 590
++ + E + +EE++ +G + F A I Y G+F + ++ + V
Sbjct: 391 LSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGL 450
Query: 591 YLHEIK-SVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
+ + L++ + E +++E+K+AG E + +LI ++
Sbjct: 451 SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSR 501
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/467 (17%), Positives = 181/467 (38%), Gaps = 70/467 (14%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHIC----EETYDYIL 440
P++ + L+ C ++ AV +VD+M G+ +T +++H + + L
Sbjct: 149 PNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMAL 208
Query: 441 VHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMG 500
+ R+ + C+ L + L + D A+ ++ +++ P +YN I+
Sbjct: 209 IDRMVAKGCQPDLVTYGVVVNGLC----KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 501 GYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT---NCQSEEDIIKYYEELKLSGIQA 557
G + K++ L++ K M ++P+ T+S LI+ N D + ++ I
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 558 TKQIFMALINAYAACGEFEKAKQV------------------VLDSEVPHKYLHEIK--- 596
F ALI+A+ G+ +A+++ +++ H L E K
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 597 ---------------SVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIE----- 636
+ LI +K++ E + ++ E+ + GL LI+
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 637 ---ELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQL-KDKF 692
++ Q + +DG +N L A+V+F+ L + K
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG-------LCKNGKLEKAMVVFEYLQRSKM 497
Query: 693 ESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAG 752
E ++ + + K+ ++ G DL + + G+ P + + ++S G
Sbjct: 498 EPTIYTYNIMIEGM------CKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISGFCRKG 550
Query: 753 DLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKI 799
A +++E + G N Y + +A L GD ++ ++K++
Sbjct: 551 SKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 100/202 (49%), Gaps = 16/202 (7%)
Query: 443 RIYSIICRHHLGLNN-EICRSLVYFFVRLKD---FKGAYKMIEDLQK-MNFIPTAAMYNA 497
+I++ RH + +++ E+ + L+++ V L A+K+ ++K +N ++N
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVF----IWNT 90
Query: 498 IMGGYFREKNISGGLSVLKHMREAN-VKPDSQTFSYLITNCQSEEDII---KYYEELKLS 553
++ GY N S+ + MR + V+PD+ T+ +LI + D+ + + S
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEAL 613
G + + +L++ YA CG+ A +V ++P K L SV I+ A + + EAL
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVF--DKMPEKDLVAWNSV-INGFAENGKPEEAL 207
Query: 614 LIYEEVKKAGLGVEPKAVISLI 635
+Y E+ G+ + ++SL+
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLL 229
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 115/270 (42%), Gaps = 24/270 (8%)
Query: 378 HEVLDVLPSMSSYKKLIQYCCGL------LKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
VL VL M S +I Y + K + A I +M +G S Q IL
Sbjct: 166 ERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKT 225
Query: 432 CEETYDYILVHRIYSIIC---RHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNF 488
E + ++ + + L + ++ ++Y + + +++ A K+ +
Sbjct: 226 FVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGV 285
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT---NCQSEEDIIK 545
+ YN++M K +S + M+ ++++PD +++ LI + EE+ +
Sbjct: 286 PQSTVTYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 342
Query: 546 YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVV----LDSEVPHKYLHEIKSVLIS 601
+EE+ +G++ T + + L++A+A G E+AK V D P + + + ++S
Sbjct: 343 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSY---TTMLS 399
Query: 602 ALASHKQLPEALLIYEEVKKAGLGVEPKAV 631
A + + A ++ +K G EP V
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGF--EPNIV 427
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/378 (19%), Positives = 154/378 (40%), Gaps = 70/378 (18%)
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREAN 522
L+ + +L +F GA +++ L KM P Y A+M Y R + ++ + M+ +
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 523 VKPDSQTFSYLITNCQSEEDIIKYYEEL-------KLSGIQATKQIFMALINAYAACGEF 575
+P + T+ +I E D K EE+ K S ++ ++++ +I Y G +
Sbjct: 212 PEPSAITYQ-IILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 576 EKAKQV---VLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVI 632
EKA++V ++ VP + + L+S S+K++ + IY++++++ ++P V
Sbjct: 271 EKARKVFSSMVGKGVPQSTV--TYNSLMSFETSYKEVSK---IYDQMQRS--DIQPDVVS 323
Query: 633 SLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDK- 691
+ +IK + A+ +F+++ D
Sbjct: 324 YAL--------------------------------LIKAYGRARREEEALSVFEEMLDAG 351
Query: 692 FESDEIQLEVLFD--SVFSVIASSKSTHLQFGLDLLWAIKDEIGLIPSRQSLDFLLSACA 749
+L D ++ ++ +K+ D ++ P S +LSA
Sbjct: 352 VRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF---------PDLWSYTTMLSAYV 402
Query: 750 NAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKIPKDDMEVCSV 809
NA D+ A ++ +V GF N+++Y + + + D + +K+ ++
Sbjct: 403 NASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 462
Query: 810 ILS--------CQNTYSA 819
IL+ C+N SA
Sbjct: 463 ILTTIMDASGRCKNFGSA 480
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/409 (18%), Positives = 162/409 (39%), Gaps = 28/409 (6%)
Query: 189 IEELSKAFHLLKLMREYGFPLGEQTYRPILQYLIDLGMV-REFELFSDVIKAENASSTSR 247
+ L +AF L M E G +TY +++ L D G++ + F LF ++I +
Sbjct: 279 VGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV-- 336
Query: 248 LGYYEMMLWLGVNHEEMIRD---ICEYITVEDSEDTTALRESYLLALCESDRKTQILDVL 304
+ +L G+ + I + +C + + + + + C+ R ++L
Sbjct: 337 --HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 305 KNIDITKLT-SVESRSNIFQALGRLQLESDAENLLLDLRASDQDPDDISNFIASFAVSIP 363
++ +V + + + + L R+ A +LL + + PD I S+ V I
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD-----IVSYNVLID 449
Query: 364 NLAAE---DIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTL 420
L E + K+ + D+ P ++ +I C K D A + M G +L
Sbjct: 450 GLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 421 ----STQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGA 476
T ++ + + +T D + I + + + ++ + K
Sbjct: 510 DEVTGTTLIDGVCKV-GKTRDALF---ILETLVKMRILTTPHSLNVILDMLSKGCKVKEE 565
Query: 477 YKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN 536
M+ + K+ +P+ Y ++ G R +I+G +L+ M+ + P+ ++ +I
Sbjct: 566 LAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIING 625
Query: 537 -CQ--SEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVV 582
CQ E+ K ++ SG+ + ++ Y G+ ++A + V
Sbjct: 626 LCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETV 674
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 7/157 (4%)
Query: 428 ILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMN 487
+ +C + L H I + + L L + + + ++ F D + A K+ ++ +
Sbjct: 162 LFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRD 221
Query: 488 FIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIK-- 545
+ +N ++ GY + + V K M VKPD T L+++C D+ +
Sbjct: 222 LVS----WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGK 277
Query: 546 -YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQV 581
+YE +K +G++ T + AL++ ++ CG+ +A+++
Sbjct: 278 EFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/270 (18%), Positives = 115/270 (42%), Gaps = 20/270 (7%)
Query: 372 VKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHI 431
+ V L E V P + L+ C L ++ + + + E G ++ ++ +++ +
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 432 CEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPT 491
+ D RI+ + + + +++ + R + K+ +D+++ + +
Sbjct: 302 FSKCGDIHEARRIFDNLEKRTI----VSWTTMISGYARCGLLDVSRKLFDDMEEKDVV-- 355
Query: 492 AAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEED------IIK 545
++NA++GG + K L++ + M+ +N KPD T + ++ C I +
Sbjct: 356 --LWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHR 413
Query: 546 YYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALAS 605
Y E+ LS + +L++ YA CG +A V + + + + +I LA
Sbjct: 414 YIEKYSLS---LNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTY---TAIIGGLAL 467
Query: 606 HKQLPEALLIYEEVKKAGLGVEPKAVISLI 635
H A+ + E+ AG+ + I L+
Sbjct: 468 HGDASTAISYFNEMIDAGIAPDEITFIGLL 497
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 447 IICRHHLGLNN---EICRS-LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGY 502
++C H + + E+ S L+ F + F+ AYK+ D N +N I+ G
Sbjct: 171 LVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVY----CWNTIIAGA 226
Query: 503 FREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQ-ATKQI 561
R +N + M KPDS T+S ++ C S E +++ + ++ I+ + +
Sbjct: 227 LRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEK-LRFGKVVQARVIKCGAEDV 285
Query: 562 FM--ALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEV 619
F+ A+++ YA CG +A +V S +P+ + +V++S AL I++E+
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVF--SRIPNPSVVSW-TVMLSGYTKSNDAFSALEIFKEM 342
Query: 620 KKAGLGVEPKAVISLI 635
+ +G+ + V S+I
Sbjct: 343 RHSGVEINNCTVTSVI 358
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 28/209 (13%)
Query: 440 LVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIM 499
L +++ + L L+ + SL + + + +YK+ Q + F A + I
Sbjct: 468 LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL---FQGIPFKDNACWASMIS 524
Query: 500 G----GYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYE----ELK 551
G GY RE + + M + PD T + ++T C S + + E L+
Sbjct: 525 GFNEYGYLRE-----AIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLR 579
Query: 552 LSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSV----LISALASHK 607
+GI + AL+N Y+ CG + A+QV + L E+ V LIS + H
Sbjct: 580 -AGIDKGMDLGSALVNMYSKCGSLKLARQV-------YDRLPELDPVSCSSLISGYSQHG 631
Query: 608 QLPEALLIYEEVKKAGLGVEPKAVISLIE 636
+ + L++ ++ +G ++ A+ S+++
Sbjct: 632 LIQDGFLLFRDMVMSGFTMDSFAISSILK 660
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 119/261 (45%), Gaps = 21/261 (8%)
Query: 377 LHEVLDVLPSMSSYKKLIQYCCGLLKVD----TAVDIVDKMCEAGFTLSTQVLQSILHIC 432
L+E +DV+P+ SS+ +I+ GL+ + A++ KM E F + L +++ C
Sbjct: 136 LYEAMDVMPNESSFNAIIK---GLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 433 EETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTA 492
+ L+ I+S R+ + + ++ LV + R + + ++ + +
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVA-- 250
Query: 493 AMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQS---EEDIIKYYEE 549
+++++ Y + L + M A V PD F ++ C ++ + Y++
Sbjct: 251 --WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 550 LKLS-GIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQ 608
++ G++A+K + L++ + G FE+A +V+ +P K + L+ A ++ +
Sbjct: 309 MQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVI--QAMPEKPTAKTWGALLGACRNYGE 366
Query: 609 LPEALLIYEEVKKAGLGVEPK 629
+ A + E+ L VEP+
Sbjct: 367 IELAEIAAREL----LMVEPE 383
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 99/217 (45%), Gaps = 15/217 (6%)
Query: 397 CCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLN 456
CC + A+ + ++ G +T + ++L +C + LV + + I R LG +
Sbjct: 547 CCP----NEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-D 601
Query: 457 NEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLK 516
+ +L+ + + K AY + + + + + M+ A++ GY L +
Sbjct: 602 IRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLV----MFTAMVAGYAVHGRGKEALMIYS 657
Query: 517 HMREANVKPDSQTFSYLITNCQSE---EDIIKYYEELK-LSGIQATKQIFMALINAYAAC 572
HM E+N+KPD + ++T C +D ++ Y+ ++ + G++ T + + ++ A
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 573 GEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQL 609
G + A V +++P + I L+ A ++ ++
Sbjct: 718 GRLDDAYSFV--TQMPVEPNANIWGTLLRACTTYNRM 752
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 467 FVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPD 526
F +L A++++ +K F+ Y++++ G FR + + + +M + N+KPD
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPD 337
Query: 527 SQTFSYLITNCQSE---EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVL 583
++ LI ED +K + GI + A+I A G E+ + + L
Sbjct: 338 IILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQL 397
Query: 584 D----SEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELT 639
+ P H ++LI ++ + + EA I+ E++K+G +LI+ L
Sbjct: 398 EMSETESFPDACTH---TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLC 454
Query: 640 Q 640
+
Sbjct: 455 K 455
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 78/169 (46%), Gaps = 10/169 (5%)
Query: 462 SLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREA 521
SL+ F + F+ A +++ + F+P +YN ++ G + ++++ L V M +
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 213
Query: 522 NVKPDSQTFSYLI---TNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKA 578
++ D+ T++ LI +N D + ++ I F ALI+ + G +A
Sbjct: 214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 273
Query: 579 ----KQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAG 623
K+++ S VP+ + + + LI+ H L +A +++ + G
Sbjct: 274 RNLYKEMIRRSVVPNVFTY---NSLINGFCIHGCLGDAKYMFDLMVSKG 319
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 157/373 (42%), Gaps = 28/373 (7%)
Query: 434 ETYDYILVHR-IYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTA 492
+TY I R ++S I L N+ + L+ + LKD A K+ +++ + N I
Sbjct: 50 DTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIIN 109
Query: 493 AMYNA-IMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDII---KYYE 548
M + + G++ E G+ V M NV+PD TF ++ C I+ K +
Sbjct: 110 VMIRSYVNNGFYGE-----GVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 549 ELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQ 608
G+ +T + L++ Y CG +A+ +VLD E+ + + S L+ A +++
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEAR-LVLD-EMSRRDVVSWNS-LVVGYAQNQR 221
Query: 609 LPEALLIYEEVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRV 668
+AL + E++ + + + SL+ ++ V +
Sbjct: 222 FDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMI 281
Query: 669 IKYCVQNNHLSSAIVLFKQLK-DKFESDEIQLEVLFDSVFSVI-ASSKSTHLQFGLDLLW 726
Y ++N A+ L+ +++ D FE D + S+ SV+ A ++ L G +
Sbjct: 282 GVY-MKNAMPVEAVELYSRMEADGFEPDAV-------SITSVLPACGDTSALSLGKKIHG 333
Query: 727 AIKDEIGLIPSRQSLDFLLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLAS 786
I+ + LIP+ + L+ A G L AR ++ + +V+S+ M A S
Sbjct: 334 YIERK-KLIPNLLLENALIDMYAKCGCLEKARDVFENMK----SRDVVSWTAMISAYGFS 388
Query: 787 GDHRSANLMLKKI 799
G A + K+
Sbjct: 389 GRGCDAVALFSKL 401
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 153/380 (40%), Gaps = 35/380 (9%)
Query: 384 LPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHR 443
P++ Y LI +D+ + + G L +L C L
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID 132
Query: 444 IYSIICRHHLGLNNEIC--RSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGG 501
++S++ + G N+++ SL+ + A+K+ +++ + + A+++ G
Sbjct: 133 LHSLVVK--CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS----G 186
Query: 502 YFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC------QSEEDIIKYYEELKLSGI 555
Y + + K M E VKPDS +++ C S E I+KY EE+++
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEM--- 243
Query: 556 QATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLI 615
Q + L+N YA CG+ EKA+ V DS V + S +I AS+ E + +
Sbjct: 244 QKNSFVRTTLVNLYAKCGKMEKARS-VFDSMVEKDIV--TWSTMIQGYASNSFPKEGIEL 300
Query: 616 YEEVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFR---VIKYC 672
+ ++ + L + +++ + ++ F +I
Sbjct: 301 FLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE--FLTNLFMANALIDMY 358
Query: 673 VQNNHLSSAIVLFKQLKDKFESDEIQLEVLFDSVFSVIASSKSTHLQFGLDLLWAIKDEI 732
+ ++ +FK++K+K +I V+ ++ S +A + L F ++ +++
Sbjct: 359 AKCGAMARGFEVFKEMKEK----DI---VIMNAAISGLAKNGHVKLSFA---VFGQTEKL 408
Query: 733 GLIPSRQSLDFLLSACANAG 752
G+ P + LL C +AG
Sbjct: 409 GISPDGSTFLGLLCGCVHAG 428
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 476 AYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTF-SYLI 534
A ++ +++ K P YNA+M + ++SG + V+K M E ++PDS TF S I
Sbjct: 299 ARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFI 358
Query: 535 TNCQSEE----DIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKA----KQVVLDSE 586
+S+E + +YY+++K + + L+ + GE K ++
Sbjct: 359 GMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGY 418
Query: 587 VPHKYLHEIKSVLISALASHKQLPEAL 613
PH + E+ L +AL + ++ +A
Sbjct: 419 CPHGHALEL---LTTALCARRRANDAF 442
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 110/274 (40%), Gaps = 24/274 (8%)
Query: 377 LHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETY 436
L E+ P + SY ++ C ++D +++ M G ++ + SI+ +
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 437 DYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYN 496
+S + R + + + +L+ F + D + A K ++ + P Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 497 AIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLS 553
AI+ G+ + ++ + M ++PDS TF+ LI C++ +D + + + +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSV-----------LISA 602
G + LI+ G+ + A ++ LHE+ + +++
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANEL----------LHEMWKIGLQPNIFTYNSIVNG 500
Query: 603 LASHKQLPEALLIYEEVKKAGLGVEPKAVISLIE 636
L + EA+ + E + AGL + +L++
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/274 (17%), Positives = 110/274 (40%), Gaps = 24/274 (8%)
Query: 377 LHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETY 436
L E+ P + SY ++ C ++D +++ M G ++ + SI+ +
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 437 DYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYN 496
+S + R + + + +L+ F + D + A K ++ + P Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 497 AIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLS 553
AI+ G+ + ++ + M ++PDS TF+ LI C++ +D + + + +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSV-----------LISA 602
G + LI+ G+ + A ++ LHE+ + +++
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANEL----------LHEMWKIGLQPNIFTYNSIVNG 500
Query: 603 LASHKQLPEALLIYEEVKKAGLGVEPKAVISLIE 636
L + EA+ + E + AGL + +L++
Sbjct: 501 LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 534
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 127/296 (42%), Gaps = 13/296 (4%)
Query: 355 IASFAVSIPNLAAE---DIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVD 411
+ ++ V + L D+ + + N E + + + +I C VD A+++
Sbjct: 225 LVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 412 KMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLK 471
+M G + S++ + ++ S + + N +L+ FV+
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 472 DFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFS 531
F A K+ +D+ K + P YN+++ G+ + + + M + PD T++
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 532 YLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKA----KQVVLD 584
LI C+S+ ED + + E+ G+ + LI G+ + A KQ+V D
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 585 SEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
P + S+L+ L ++ +L +AL +++ ++K+ + ++ ++IE + +
Sbjct: 465 GVPPDIMTY---SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/281 (19%), Positives = 119/281 (42%), Gaps = 11/281 (3%)
Query: 347 DPD--DISNFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVD 404
+PD +S+ I F A D++ K+E + P + Y +I C + V+
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG----FRPDVVIYNTIIDGSCKIGLVN 191
Query: 405 TAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLV 464
AV++ D+M G S++ + + R+ + + N +++
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 465 YFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVK 524
FV+ F A K+ E++ + P YN+++ G + +L M
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 525 PDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQV 581
PD T++ LI C+S+ ++ K + E+ G+ + +I Y G + A+++
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 582 VLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKA 622
S + + S+L+ L + ++ +AL+++E ++K+
Sbjct: 372 F--SRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKS 410
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/272 (18%), Positives = 109/272 (40%), Gaps = 5/272 (1%)
Query: 372 VKVENLHEVLDVLPSMSSYKKLIQYCC-GLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH 430
+ V N + + P++ +Y +I C G ++ D+M G S+L
Sbjct: 288 ISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLA 347
Query: 431 ICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIP 490
+C + ++ + + + +L+ + A++++ + +P
Sbjct: 348 VCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMP 407
Query: 491 TAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI---TNCQSEEDIIKYY 547
Y+ ++ G+ + L++ MR + D +++ L+ T E+ +
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 548 EELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK-SVLISALASH 606
E+ GI+ + AL+ Y G++++ K+V + + H + + S LI +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 607 KQLPEALLIYEEVKKAGLGVEPKAVISLIEEL 638
EA+ I+ E K AGL + +LI+ L
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDAL 559
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 404 DTAVDIVDKMCEAGFTLSTQV-LQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRS 462
+ A++I D+M G + + +V + S++ C ++ I HL L + S
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 463 LVYFFVRLKDFKGAYKMIEDLQKMNFIPT-AAMYNAIMGGYFREKNISGGLSVLKHMREA 521
L+ + + A+ + + + T A M+NAI+GG I L + MRE+
Sbjct: 282 LIDMYAKCGSIGDAWSV---FYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRES 338
Query: 522 NVKPDSQTFSYLITNCQSEEDIIK----YYEELKLSGIQATKQIFMALINAYAACGEFEK 577
+ PD TF L+ C S ++K +++ LK SG + + + +++ + G +
Sbjct: 339 KIDPDEITFLCLLAAC-SHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKD 397
Query: 578 AKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEP 628
A + SE+P K + L++ +H L A E V K + ++P
Sbjct: 398 AHDFI--SEMPIKPTGSMLGALLNGCINHGNLELA----ETVGKKLIELQP 442
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 136/362 (37%), Gaps = 89/362 (24%)
Query: 299 QILDVLKNIDITKLTSVESRSNIFQALGRLQLESDAENLLLDLRASDQDPDDISNFIASF 358
Q+ D + +D + + + RL L +A L LR SD PDD S
Sbjct: 25 QVFDGMPELDTVAWNT------MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYS------ 72
Query: 359 AVSIPNLAAEDIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGF 418
+ ++ C L V I + +GF
Sbjct: 73 -------------------------------FTAILSTCASLGNVKFGRKIQSLVIRSGF 101
Query: 419 TLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICR-SLVYFFVRLKDFKGAY 477
S V S++ + + D + ++++ +C NE+ SL++ ++ + F+ A
Sbjct: 102 CASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS---RNEVTWCSLLFAYMNAEQFEAAL 158
Query: 478 KMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC 537
+ ++ K A +N ++ G+ + LS+ K M E+ KPD TFS L+ C
Sbjct: 159 DVFVEMPK----RVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNAC 214
Query: 538 --------------------------QSEEDIIKYYEEL--------KLSGIQATKQI-F 562
+++ ++ +Y +L +L I+ Q+ +
Sbjct: 215 SADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSW 274
Query: 563 MALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKA 622
++I+A GE EKA +V P K + + +I+ + +AL + E+ K+
Sbjct: 275 NSIIDACMKIGETEKALEVF--HLAPEKNI-VTWTTMITGYGRNGDGEQALRFFVEMMKS 331
Query: 623 GL 624
G+
Sbjct: 332 GV 333
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 109/251 (43%), Gaps = 12/251 (4%)
Query: 381 LDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYIL 440
L VLP + +Y LI+ + +D A + +M EAG S++ + ++
Sbjct: 42 LGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKN---LM 98
Query: 441 VHRIYSIICRH-HLGLNNEIC--RSLVYFFVRLKDFKGAYKMI-EDLQKMNFIPTAAMYN 496
++R+ + H GL+ ++ +L+ + +L A+K++ ED+ +P YN
Sbjct: 99 LNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYN 158
Query: 497 AIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSEE--DIIKYYEELKLS 553
++ + + + + KH++ + VKP+ T++ LI C+S + ELK S
Sbjct: 159 ILLDALCKSGHTDNAIELFKHLK-SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKS 217
Query: 554 GIQATKQIFMALINAYAACGEFEKAKQVVLD-SEVPHKYLHEIKSVLISALASHKQLPEA 612
G + ++ Y EK Q+ L + + + ++SAL + EA
Sbjct: 218 GYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEA 277
Query: 613 LLIYEEVKKAG 623
E+ ++G
Sbjct: 278 YECMHELVRSG 288
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 454 GLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLS 513
G++ ++ V + ++ + A ++ D ++ +P YN ++ GY R I +
Sbjct: 10 GISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYA 69
Query: 514 VLKHMREANVKPDSQTFSYLITNCQSE---EDIIKYYEELKLSGIQATKQIFMALINAYA 570
V + MREA ++PD T++ LI+ +++ ++E+ SG+ + L++ Y
Sbjct: 70 VTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYF 129
Query: 571 ACGEFEKAKQVV-----LDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVK 620
G +A +++ L VP + ++L+ AL A+ +++ +K
Sbjct: 130 KLGRHGEAFKILHEDIHLAGLVPGI---DTYNILLDALCKSGHTDNAIELFKHLK 181
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 478 KMIEDLQKMNFIPTAAMYN---AIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLI 534
KM+ D++ P A +N A+ G +K ++ V + M+ +PD TF+ LI
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN---RVFREMKSCGFEPDRDTFNTLI 498
Query: 535 T---NCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLD 584
+ C SE D K Y E+ +G A + AL+NA A G++ + V+ D
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 382 DVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEETYDYIL 440
DV+P + SYK LIQ C +V+ A++++D M GF ++L+ +C +T
Sbjct: 220 DVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQ---- 275
Query: 441 VHRIYSIICRHHL-GLNNEICR--SLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNA 497
+ Y ++CR L G N ++ +++ F R A K+++D+ P + Y
Sbjct: 276 LREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRT 335
Query: 498 IMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC 537
++GG + G L+ M P + ++NC
Sbjct: 336 LIGGLCDQGMFDEGKKYLEEMISKGFSP-----HFSVSNC 370
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 88/197 (44%), Gaps = 3/197 (1%)
Query: 393 LIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHH 452
L+Q + ++ D+ ++C+ GFTLS L +++H ++ LV RIY
Sbjct: 170 LVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKR 229
Query: 453 LGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGL 512
+ N R ++ + K +++ + +P+ + +++ E I +
Sbjct: 230 IYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESM 289
Query: 513 SVLKHMREANVKPDSQTFSYLITNCQSEEDII---KYYEELKLSGIQATKQIFMALINAY 569
S+LK + N+ D+ +S ++ E D++ K ++E+ G A ++ +
Sbjct: 290 SLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVC 349
Query: 570 AACGEFEKAKQVVLDSE 586
G+ ++A++++ + E
Sbjct: 350 CEKGDVKEAERLLSEME 366
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/179 (20%), Positives = 78/179 (43%), Gaps = 3/179 (1%)
Query: 405 TAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLV 464
+A + D+M + GF+ ++ V + +C E D R+ S + + +E L+
Sbjct: 322 SARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI 381
Query: 465 YFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVK 524
F R + + E + +P+ + +N ++ + +N++ +L +
Sbjct: 382 GGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFV 441
Query: 525 PDSQTFSYLITNCQSEEDI---IKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQ 580
PD T+S+LI DI +K + E++ + ++F +LI CG+ E ++
Sbjct: 442 PDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEK 500
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 126/296 (42%), Gaps = 13/296 (4%)
Query: 355 IASFAVSIPNLAAE---DIIVKVENLHEVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVD 411
+ ++ V + L D+ + N E + + + +I C VD A+++
Sbjct: 150 LVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 209
Query: 412 KMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLK 471
+M G + S++ + ++ S + + N +L+ FV+
Sbjct: 210 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 269
Query: 472 DFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFS 531
F A K+ +D+ K + P YN+++ G+ + + + M + PD T++
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYN 329
Query: 532 YLITN-CQSE--EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKA----KQVVLD 584
LI C+S+ ED + + E+ G+ + LI G+ + A KQ+V D
Sbjct: 330 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Query: 585 SEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
P + S+L+ L ++ +L +AL +++ ++K+ + ++ ++IE + +
Sbjct: 390 GVPPDIMTY---SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
>AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16983638-16986681 FORWARD
LENGTH=444
Length = 444
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
Query: 481 EDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNC--- 537
+D++ PTA ++++ + G + +S + M+ + PD +++LI+ C
Sbjct: 65 DDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNFLISTCGKC 124
Query: 538 QSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEI-K 596
++ ++ I+ Y+E+K ++ Q F+ L+NA A G+ + +V D L++
Sbjct: 125 KNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAGVGLNQFCY 184
Query: 597 SVLISALASHKQLPEAL 613
+ LI+A + + P+ L
Sbjct: 185 AGLITAHLNKQPRPDNL 201
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 108/242 (44%), Gaps = 10/242 (4%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P + +Y LI +D AV++ K+ + G + + ++ +T ++ +
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+S + ++ + + +L+ F+R DF A K+ + +NA++ G+ R
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDI---IKYYEELKLSGIQATKQI 561
+ L+ + M E ++ PD T+S +I ++D+ IK + ++ + +
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592
Query: 562 FMALINAYAACGEFEKA----KQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYE 617
+ +LIN + G+F+ A K++ L VP+ + + LI +LA E + Y
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY---TTLIRSLAKESSTLEKAVYYW 649
Query: 618 EV 619
E+
Sbjct: 650 EL 651
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 133/320 (41%), Gaps = 20/320 (6%)
Query: 332 SDAENLLLDLRASDQDPD--DISNFIASFAVSIPNLAAEDIIVKVENLHEVLDVLPSMSS 389
+DA +L D+ S P D + +++ I L D+++ + EVL + + +
Sbjct: 67 NDAIDLFSDMVKSRPFPSIVDFNRLLSA----IVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 390 YKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILH-ICEETY--DYI-LVHRIY 445
+ +I C +V A+ I+ KM + G+ + S+++ C D + LV ++
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 446 SIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFRE 505
I + + N I SL + K A+ +++++ P Y A++ G
Sbjct: 183 EIGYKPDIVAYNAIIDSL----CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 506 KNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDII---KYYEELKLSGIQATKQIF 562
S +L M + + P+ T+S L+ ++ + +EE+ I +
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 563 MALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKS--VLISALASHKQLPEALLIYEEVK 620
+LIN ++A Q + D V L ++ S LI+ K++ + + ++ E+
Sbjct: 299 SSLINGLCLHDRIDEANQ-MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 621 KAGLGVEPKAVISLIEELTQ 640
+ GL +LI+ Q
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQ 377
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 115/250 (46%), Gaps = 10/250 (4%)
Query: 388 SSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSI 447
S + LIQ+ VD A+D+ K+ + Q L +++++ + + +
Sbjct: 117 SLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDG 176
Query: 448 ICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKN 507
L N+ L+ F+ D++ A K+ +++ +M P+ YN+++G R +
Sbjct: 177 AKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDD 236
Query: 508 ISGGLSVLKHMREANVKPDSQTFSYLITN--CQSE-EDIIKYYEELKLSGIQATKQIFMA 564
+ S+L+ M + ++P++ TF L+ C+ E + K +++ G + +
Sbjct: 237 MGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGI 296
Query: 565 LINAYAACGEFEKAKQVVLDSEVPHKYLHE---IKSVLISALASHKQLPEALLIYEEVKK 621
L++ G ++AK +L E+ + + I ++L++ L + ++PEA + E++
Sbjct: 297 LMSDLGKRGRIDEAK--LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQM 354
Query: 622 AGLGVEPKAV 631
G +P A
Sbjct: 355 K--GCKPNAA 362
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/220 (18%), Positives = 100/220 (45%), Gaps = 12/220 (5%)
Query: 404 DTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSL 463
+ AV++ +M +G + +L +C + +I+ + R L N +C SL
Sbjct: 71 EKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL 130
Query: 464 VYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANV 523
+ + R + + K+ ++ N + +N+I+ Y + + + +L M +
Sbjct: 131 IVMYSRNGKLELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEICGL 186
Query: 524 KPDSQTFSYLITNCQSE---EDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQ 580
KPD T++ L++ S+ +D I + ++++G++ + +L+ A A G + K
Sbjct: 187 KPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKA 246
Query: 581 V---VLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYE 617
+ +L +++ + +++ LI LP A ++++
Sbjct: 247 IHGYILRNQLWYDVY--VETTLIDMYIKTGYLPYARMVFD 284
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 494 MYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQS-----EEDIIKYYE 548
++N+I+ + + L +RE+ V PD TF +I C D++ YE
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLV--YE 130
Query: 549 ELKLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQ 608
++ G ++ + AL++ Y+ G +A+QV E+P + L S LIS +SH
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVF--DEMPVRDLVSWNS-LISGYSSHGY 187
Query: 609 LPEALLIYEEVKKA 622
EAL IY E+K +
Sbjct: 188 YEEALEIYHELKNS 201
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/247 (18%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
P + +Y +I + + ++ + ++ +G L + L S++ + +L++ I
Sbjct: 285 PDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH---LMLIYAI 341
Query: 445 YSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFR 504
+ + + + + +L + +L + + A K+ ++ + + +P+ +NA++ GY +
Sbjct: 342 HGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKS-LPS---WNAMISGYTQ 397
Query: 505 EKNISGGLSVLKHMREANVKPDSQTFSYLITNCQ--SEEDIIKYYEEL-KLSGIQATKQI 561
+S+ + M+++ P+ T + +++ C + K+ +L + + +++ +
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYV 457
Query: 562 FMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKK 621
ALI YA CG +A+++ ++ K + +IS H Q EAL I+ E+
Sbjct: 458 STALIGMYAKCGSIAEARRLF---DLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 622 AGLGVEP 628
+G+ P
Sbjct: 515 SGITPTP 521
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 20/245 (8%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAG-----FTLSTQVLQSILHICEETYDYI 439
P + + L+ C ++ AV +VD+M E G FT +T + LH + +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH-NKASEAVA 209
Query: 440 LVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIM 499
LV ++ C+ L + L + D A +++ ++K +YN I+
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGL----CKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 500 GGYFREKNISGGLSVLKHMREANVKPDSQTFSYLIT---NCQSEEDIIKYYEELKLSGIQ 556
G + K++ L++ M ++PD T+S LI+ N D + ++ I
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKIN 325
Query: 557 ATKQIFMALINAYAACGEFEKAK----QVVLDSEVPHKYLHEIKSVLISALASHKQLPEA 612
F ALI+A+ G+ +A+ +++ S P + + S LI+ H +L EA
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY---SSLINGFCMHDRLDEA 382
Query: 613 LLIYE 617
++E
Sbjct: 383 KHMFE 387
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 443 RIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGY 502
+++ I + G N + SLV F+++ + A K+ +++ + + I +N+I+ GY
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVIS----WNSIINGY 271
Query: 503 FREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYEELKLSGIQAT---- 558
GLSV M + ++ D T + C ++ +I + G++A
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGC-ADSRLISLGRAVHSIGVKACFSRE 330
Query: 559 KQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEE 618
+ L++ Y+ CG+ + AK V E+ + + S +I+ A EA+ ++EE
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVF--REMSDRSVVSYTS-MIAGYAREGLAGEAVKLFEE 387
Query: 619 VKKAGLGVEPKAVISLI 635
+++ G+ + V +++
Sbjct: 388 MEEEGISPDVYTVTAVL 404
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 106/234 (45%), Gaps = 11/234 (4%)
Query: 406 AVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVY 465
AV + ++M E G + + ++L+ C R++ I + LG + + +L+
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 466 FFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHM-REANVK 524
+ + + A + +++ + I +N I+GGY + + LS+ + E
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIIS----WNTIIGGYSKNCYANEALSLFNLLLEEKRFS 496
Query: 525 PDSQTFSYLITNCQSEEDIIKYYE---ELKLSGIQATKQIFMALINAYAACGEFEKAKQV 581
PD +T + ++ C S K E + +G + + + +L++ YA CG A +
Sbjct: 497 PDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHML 556
Query: 582 VLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLI 635
D + K L +V+I+ H EA+ ++ ++++AG+ + + +SL+
Sbjct: 557 FDD--IASKDLVSW-TVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL 607
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 100/536 (18%), Positives = 221/536 (41%), Gaps = 71/536 (13%)
Query: 152 TVEVFGHLGR-ETGLKEYNKLIQLCVKKARGADDEDIAI---------EELSKAFHLLKL 201
++V+ + G+ E L +N+++ +RG DE I+ ++ KAF L+++
Sbjct: 220 VLQVYCNTGKSERALSVFNEIL------SRGWLDEHISTILVVSFCKWGQVDKAFELIEM 273
Query: 202 MREYGFPLGEQTYRPILQYLIDLGMV-REFELFSDVIKAENASSTSRLGYYEMMLWLGVN 260
+ E L +TY ++ + + + F+LF K + + Y++++
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFE---KMRRMGMNADIALYDVLIGGLCK 330
Query: 261 HEEMIRDICEYITVEDS--EDTTALRESYLLALCESDRKTQILDVLKNIDITKLTSVESR 318
H+++ + Y+ ++ S + L + E ++I +V+ DI K + +
Sbjct: 331 HKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIG-DIDKKSVMLLY 389
Query: 319 SNIFQALGRLQLESDAENLLLDLRASDQDPDDISNFIA--------------SFAVSIPN 364
++F+ R L +A + + +L + + D +S + S ++ I
Sbjct: 390 KSLFEGFIRNDLVHEAYSFIQNLMG-NYESDGVSEIVKLLKDHNKAILPDSDSLSIVINC 448
Query: 365 LA-AEDIIVKVENLHEVLD--VLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLS 421
L A + + V LH+++ ++P Y +I+ C + + ++ ++ +M +AG S
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 422 TQVLQSILHICEETYDYILV------HRIYSI--ICRHHLGLNNEICRSLVYFFVRLKDF 473
L I E D++ R Y +H L ++C + R D
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCEN-----GRAVD- 562
Query: 474 KGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYL 533
A K ++D+ F+ A + G + + + GL + + + PD + L
Sbjct: 563 --ACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVL 620
Query: 534 I----TNCQS-EEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVVL----D 584
I C++ E DI+ + E+ G++ T + ++I+ + GE ++ ++ D
Sbjct: 621 IKALCKACRTMEADIL--FNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYED 678
Query: 585 SEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
+ P + + LI L + + EA+ + E+K ++LI+ L +
Sbjct: 679 EKNPDVITY---TSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCK 731
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Query: 457 NEICRSLVYFFVRLKDFKGAYKMIE------DLQKMNFIPTAAMYNAIMGGYFREKNISG 510
N C ++ + V +K A + +E ++ PT A YN+++ G+ +E I
Sbjct: 608 NGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Query: 511 GLSVLKHMREANVKPDSQTFSYLITN-CQS--EEDIIKYYEELKLSGIQATKQIFMALIN 567
GLS + M E PD T++ LI C S + I + E+K + FMALI
Sbjct: 668 GLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQ 727
Query: 568 AYAACG 573
CG
Sbjct: 728 GLCKCG 733
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/410 (19%), Positives = 173/410 (42%), Gaps = 47/410 (11%)
Query: 373 KVENLHEVLDVLPS--MSSYKKLIQ--YCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSI 428
KVE +V DV+ + + S+ +I Y G + + A+ + D M L + S+
Sbjct: 167 KVEMARDVFDVMKNRDVISWNTMISGYYRNGYM--NDALMMFDWMVNESVDLDHATIVSM 224
Query: 429 LHICEETYDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNF 488
L +C D + ++ ++ LG E+ +LV +++ A + + +++ +
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV 284
Query: 489 IPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYE 548
I M N GY + ++ L + + M+ V+P++ T + L++ C D +K +
Sbjct: 285 ITWTCMIN----GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCG---DALKVND 337
Query: 549 ELKLSGIQATKQIF------MALINAYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISA 602
L G +Q++ +LI+ YA C + +V + KY S +I+
Sbjct: 338 GKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS---KYHTGPWSAIIAG 394
Query: 603 LASHKQLPEALLIYEEVKKAGLGVEPKAVI--------SLIEELTQXXXXXXXXXXXXXX 654
++ + +AL +++ +++ VEP + + +L Q
Sbjct: 395 CVQNELVSDALGLFKRMRRE--DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFM 452
Query: 655 XXXXDYWVDGCFRVIKYCVQNNHLSSAIVLFKQLKDKFESDEIQLEVLFDSVFSVIASSK 714
+D ++ + L SA +F +++K +S ++ VL+ ++ S
Sbjct: 453 SS-----LDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV---VLWGALISGYGMHG 504
Query: 715 STH--LQFGLDLLWAIKDEIGLIPSRQSLDFLLSACANAGDLNNARLIWR 762
H LQ ++++ + G+ P+ + L+AC+++G + ++R
Sbjct: 505 DGHNALQVFMEMVRS-----GVTPNEITFTSALNACSHSGLVEEGLTLFR 549
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 474 KGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPD---SQTF 530
K A ++ + IP A YNA++ G+ + KN+ L +L ++ +KPD TF
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513
Query: 531 SYLITNCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFEKAKQVV-----LDS 585
+ + + + E E+K GI+A I+ L++AY G + ++ LD
Sbjct: 514 IWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDI 573
Query: 586 EVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVI 632
EV VLI L +K + +A+ + + G++ A I
Sbjct: 574 EVTVVTF----CVLIDGLCKNKLVSKAVDYFNRISN-DFGLQANAAI 615
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 88/482 (18%), Positives = 178/482 (36%), Gaps = 121/482 (25%)
Query: 384 LPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHR 443
PS+ + KL+ + K D + +KM IL + Y Y +
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKM-------------EILGVSHNLYTYNI--- 105
Query: 444 IYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYF 503
+ + +CR RS + F A ++ + K+ + P+ N+++ G+
Sbjct: 106 MINCLCR----------RSQLSF---------ALAILGKMMKLGYGPSIVTLNSLLNGFC 146
Query: 504 REKNISGGLSVLKHMREANVKPDSQTFSYLITNC---QSEEDIIKYYEELKLSGIQATKQ 560
IS ++++ M E +PD+ TF+ L+ + + E + + G Q
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 561 IFMALINAYAACGE-------FEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEAL 613
+ A+IN GE K ++ ++++V I S +I +L ++ + +AL
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV------IYSTVIDSLCKYRHVDDAL 260
Query: 614 LIYEEVKKAGLGVEPKAVISLIEELTQXXXXXXXXXXXXXXXXXXDYWVDGCFRVIKYCV 673
++ E+ G+ + SLI L W D R++ +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGR-----------------WSDAS-RLLSDML 302
Query: 674 QNNHLSSAIVLFKQLKDKF--ESDEIQLEVLFD--------------------------- 704
+ ++ +V F L D F E I+ E LFD
Sbjct: 303 ERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 705 ----SVFSVIASS-----------------KSTHLQFGLDLLWAIKDEIGLIPSRQSLDF 743
+F+++ S K+ + G++L + GL+ + +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTT 420
Query: 744 LLSACANAGDLNNARLIWREYEVAGFPYNVLSYLRMYQALLASGDHRSANLMLKKIPKDD 803
L+ A D +NA++++++ G N+++Y + L +G A ++ + + K
Sbjct: 421 LIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Query: 804 ME 805
ME
Sbjct: 481 ME 482
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/314 (18%), Positives = 132/314 (42%), Gaps = 18/314 (5%)
Query: 321 IFQALGRLQLESDAENLLLDLRASDQDPDDISNFIASFAVSIPNLAAEDIIVKVENLHEV 380
+FQ + L S E LL ++ + P+ + + + I +L ++ + + E + E+
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIKPN-----VYIYTIYILDLCRDNKMEEAEKMFEL 259
Query: 381 L---DVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYD 437
+ VLP++ +Y +I C V A + ++ A + V +++ + +
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 438 YILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNA 497
+ ++ + + + N + L++ + + A ++ +++ +N P Y
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 498 IMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSE---EDIIKYYEELKLSG 554
++ G E ++ + + M+ + P S T++ LI E E + E+ SG
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 555 IQATKQIFMALINAYAACGEFEKAK----QVVLDSEVPHKYLHEIKSVLISALASHKQLP 610
++ F LI+ Y + + A ++ + VP + + LI A +
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY---TALIDAHFKEANMK 496
Query: 611 EALLIYEEVKKAGL 624
EAL +Y ++ +AG+
Sbjct: 497 EALRLYSDMLEAGI 510
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
PS+++ LI C + A + M G L +++H +T+ ++++
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ---LNKV 497
Query: 445 YSIICR-HHLGLNNEICRS--LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGG 501
+ +I G++ ++ L++ V A ++I +L + F+P+ + ++GG
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 502 YFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQAT 558
+ + + + +M + +KPD T S L+ C+++ E I + +L +G++
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 559 KQIFMALINAYAACGEFEKAKQVV 582
++ LI+ Y + G+ EKA +++
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELI 641
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 385 PSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRI 444
PS+++ LI C + A + M G L +++H +T+ ++++
Sbjct: 441 PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQ---LNKV 497
Query: 445 YSIICR-HHLGLNNEICRS--LVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGG 501
+ +I G++ ++ L++ V A ++I +L + F+P+ + ++GG
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 502 YFREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSE--EDIIKYYEELKLSGIQAT 558
+ + + + +M + +KPD T S L+ C+++ E I + +L +G++
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 559 KQIFMALINAYAACGEFEKAKQVV 582
++ LI+ Y + G+ EKA +++
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELI 641
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 467 FVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANVKPD 526
+ R + K A +++ F ++ +N ++ + +N+ V M++ +PD
Sbjct: 172 YARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPD 231
Query: 527 SQTFSYLITNCQSEEDIIKYYE---ELKLSGIQATKQIFMALINAYAACGEFEKAKQVVL 583
++++ L+ E ++++ E E+K G + + +INA+ ++E+A +
Sbjct: 232 IKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Query: 584 DSE------VPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVEPKAVISLI 635
+ E PH I LI+ L S K+L +AL +E K +G +E +L+
Sbjct: 292 EMEQRNCKPSPH-----IFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 379 EVLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGF---TLSTQVLQSILHICEET 435
E L +P + ++ + C KV AV M + G +S +L + L +
Sbjct: 106 ETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKV 165
Query: 436 YDYILVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMI-EDLQKMNFIPTAAM 494
D + I++ + R + +N+ C +LV + AY+M+ E+++ + +
Sbjct: 166 TDAV---EIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222
Query: 495 YNAIMGGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSEEDIIKYYE----EL 550
YNA++ G+ + I ++ +M + +PD T++ L+ N + +++K E E+
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL-NYYYDNNMLKRAEGVMAEM 281
Query: 551 KLSGIQATKQIFMALINAYAACGEFEKAKQVVLDSEVPHKYLHEIK-SVLISALASHKQL 609
SGIQ + L+ + +K ++ P + + S LI
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 610 PEALLIYEEVKKAGLGVEPKAVISLIEELTQ 640
+A ++EE+++ G+ + SLI+ +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR 372
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 92/187 (49%), Gaps = 14/187 (7%)
Query: 453 LGLNNEI--CRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISG 510
LGL++ + C +L+ + +D A + + + + P YNA++ GY R +
Sbjct: 158 LGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVE----PCVVCYNAMITGYARRNRPNE 213
Query: 511 GLSVLKHMREANVKPDSQTFSYLITNCQ--SEEDIIKY-YEELKLSGIQATKQIFMALIN 567
LS+ + M+ +KP+ T ++++C D+ K+ ++ K ++ ALI+
Sbjct: 214 ALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALID 273
Query: 568 AYAACGEFEKAKQVVLDSEVPHKYLHEIKSVLISALASHKQLPEALLIYEEVKKAGLGVE 627
+A CG + A V + ++ +K + S +I A A+H + +++L++E ++ V+
Sbjct: 274 MFAKCGSLDDA--VSIFEKMRYKDT-QAWSAMIVAYANHGKAEKSMLMFERMRSE--NVQ 328
Query: 628 PKAVISL 634
P + L
Sbjct: 329 PDEITFL 335
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/176 (19%), Positives = 79/176 (44%), Gaps = 10/176 (5%)
Query: 404 DTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEICRSL 463
+ A+++ M + G T +L IL C + L ++ + + L N + L
Sbjct: 140 ENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNEL 199
Query: 464 VYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMREANV 523
+ + + AY + ++ N + +N ++ G+ +E + + + + M+
Sbjct: 200 LTLYPKAGRMGDAYNLFVEMPVRNRMS----WNVMIKGFSQEYDCESAVKIFEWMQREEF 255
Query: 524 KPDSQTFSYLIT---NCQSEEDIIKYYEELKLSGIQATKQIFMALINAYAACGEFE 576
KPD T++ +++ C ED++KY+ +++SG + + AL ++ C E E
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGE---ALAVFFSVCAELE 308
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 401 LKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVHRIYSIICRHHLGLNNEIC 460
K D ++ + KM EA + S++ C + H+++ + + +
Sbjct: 270 FKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGYEKYTLVS 326
Query: 461 RSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGYFREKNISGGLSVLKHMRE 520
+ + + +DF A+K+ E L++ + + +N ++ Y + K +SV K M
Sbjct: 327 NATMTMYSSFEDFGAAHKVFESLEEKDLVT----WNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 521 ANVKPDSQTFSYLITNCQSEEDIIKYYEELKLS-GIQATKQIFMALINAYAACGEFEKA 578
VKPD TF L+ + D+++ + + G+ + +I ALI+AY+ G+ EKA
Sbjct: 383 IGVKPDEFTFGSLLAT-SLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 108/262 (41%), Gaps = 5/262 (1%)
Query: 383 VLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYILVH 442
V P + +Y LI C A+ + D+M +G + S +H
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 443 RIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIMGGY 502
R++ I + + N+ +L+ + R+ D A ++ E ++ F P YN+I+
Sbjct: 294 RLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 503 FREKNISGGLSVLKHMREANVKPDSQTFSYLITN-CQSEEDI--IKYYEELKLSGIQATK 559
+ I +L M ++PD+ T + LI C+ E+ + +K +++ SG++
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 560 QIFMALINAYAACGEFEKAKQVVLDS-EVPHKYLHEIKSVLISALASHKQLPEALLIYEE 618
+ ALI+ + E E AK+ + E + S L+ + + E + EE
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 619 VKKAGLGVEPKAVISLIEELTQ 640
+K GL + LI + +
Sbjct: 473 FEKRGLCADVALYRGLIRRICK 494
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 87/208 (41%), Gaps = 7/208 (3%)
Query: 380 VLDVLPSMSSYKKLIQYCCGLLKVDTAVDIVDKMCEAGFTLSTQVLQSILHICEETYDYI 439
VLDV S+ LI+ CC +++ + D++ ++ E GF+ + + +++ C + +
Sbjct: 160 VLDVY----SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 440 LVHRIYSIICRHHLGLNNEICRSLVYFFVRLKDFKGAYKMIEDLQKMNFIPTAAMYNAIM 499
++ + + L N L+ + K ++M E +Q+ P YN +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 500 GGYFREKNISGGLSVLKHMREANVKPDSQTFSYLITNCQSE---EDIIKYYEELKLSGIQ 556
++ V MRE V + T++ LI E + K +++K GI
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 557 ATKQIFMALINAYAACGEFEKAKQVVLD 584
+ LI+ + G+ KA + D
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRD 363