Miyakogusa Predicted Gene

Lj3g3v1010910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v1010910.1 Non Chatacterized Hit- tr|I3T7H3|I3T7H3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,99.14,0,no
description,NULL; SUI1_MOF2: translation initiation factor
SUI1,Eukaryotic translation initiation,CUFF.42173.1
         (116 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54760.3 | Symbols:  | Translation initiation factor SUI1 fam...   213   2e-56
AT5G54760.2 | Symbols:  | Translation initiation factor SUI1 fam...   213   2e-56
AT5G54760.1 | Symbols:  | Translation initiation factor SUI1 fam...   213   2e-56
AT4G27130.1 | Symbols:  | Translation initiation factor SUI1 fam...   211   6e-56
AT1G54290.1 | Symbols:  | Translation initiation factor SUI1 fam...   207   8e-55
AT5G54940.2 | Symbols:  | Translation initiation factor SUI1 fam...   173   2e-44
AT5G54940.1 | Symbols:  | Translation initiation factor SUI1 fam...   173   2e-44

>AT5G54760.3 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22244732-22245517 FORWARD LENGTH=113
          Length = 113

 Score =  213 bits (542), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/116 (88%), Positives = 111/116 (95%), Gaps = 3/116 (2%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           MSELD+Q+PTAFDPFA+ANV++SGAG   TK+YVHIRVQQRNGRKSLTTVQGLKKE+SY 
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAG---TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYT 57

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKKDNIKIHGF
Sbjct: 58  KILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54760.2 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22244732-22245517 FORWARD LENGTH=113
          Length = 113

 Score =  213 bits (542), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/116 (88%), Positives = 111/116 (95%), Gaps = 3/116 (2%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           MSELD+Q+PTAFDPFA+ANV++SGAG   TK+YVHIRVQQRNGRKSLTTVQGLKKE+SY 
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAG---TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYT 57

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKKDNIKIHGF
Sbjct: 58  KILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54760.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22244732-22245517 FORWARD LENGTH=113
          Length = 113

 Score =  213 bits (542), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/116 (88%), Positives = 111/116 (95%), Gaps = 3/116 (2%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           MSELD+Q+PTAFDPFA+ANV++SGAG   TK+YVHIRVQQRNGRKSLTTVQGLKKE+SY 
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAG---TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYT 57

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKKDNIKIHGF
Sbjct: 58  KILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT4G27130.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr4:13604814-13605525 REVERSE LENGTH=113
          Length = 113

 Score =  211 bits (538), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 102/116 (87%), Positives = 110/116 (94%), Gaps = 3/116 (2%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           MSELD+Q+PTAFDPFA+AN ++SGAG   TK+YVHIRVQQRNGRKSLTTVQGLKKE+SY 
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAG---TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYT 57

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKKDNIKIHGF
Sbjct: 58  KILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT1G54290.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr1:20268710-20269390 REVERSE LENGTH=113
          Length = 113

 Score =  207 bits (528), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 100/116 (86%), Positives = 110/116 (94%), Gaps = 3/116 (2%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           MS+L+ Q+PTAFDPFA+AN ++SGAG   TK+YVHIRVQQRNGRKSLTTVQGLKKE+SY+
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAG---TKEYVHIRVQQRNGRKSLTTVQGLKKEYSYS 57

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           KILKDLKKEFCCNGTVVQD ELGQVIQLQGDQRKNVSTFLVQAG+VKKDNIKIHGF
Sbjct: 58  KILKDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113


>AT5G54940.2 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22308420-22308758 REVERSE LENGTH=112
          Length = 112

 Score =  173 bits (439), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/116 (74%), Positives = 98/116 (84%), Gaps = 4/116 (3%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           M ELD QIP+A+DPFAEA   +S A GA  K+ +HIR+QQRNG+KSLTTVQGLKKE+SY 
Sbjct: 1   MVELDIQIPSAYDPFAEAK--DSDAPGA--KENIHIRIQQRNGKKSLTTVQGLKKEYSYE 56

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           +ILKDLKK+FCCNG VVQD ELG++IQLQGDQRK VS FLVQ GI KKD IKIHGF
Sbjct: 57  RILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112


>AT5G54940.1 | Symbols:  | Translation initiation factor SUI1 family
           protein | chr5:22308420-22308758 REVERSE LENGTH=112
          Length = 112

 Score =  173 bits (439), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 86/116 (74%), Positives = 98/116 (84%), Gaps = 4/116 (3%)

Query: 1   MSELDAQIPTAFDPFAEANVDESGAGGAGTKDYVHIRVQQRNGRKSLTTVQGLKKEFSYN 60
           M ELD QIP+A+DPFAEA   +S A GA  K+ +HIR+QQRNG+KSLTTVQGLKKE+SY 
Sbjct: 1   MVELDIQIPSAYDPFAEAK--DSDAPGA--KENIHIRIQQRNGKKSLTTVQGLKKEYSYE 56

Query: 61  KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKDNIKIHGF 116
           +ILKDLKK+FCCNG VVQD ELG++IQLQGDQRK VS FLVQ GI KKD IKIHGF
Sbjct: 57  RILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112