Miyakogusa Predicted Gene

Lj3g3v0978810.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0978810.2 Non Chatacterized Hit- tr|I1MJ44|I1MJ44_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21361
PE,78.33,0,seg,NULL; zf-C3HC,Zinc finger, C3HC-like; ZINC ION
BINDING,NULL; FAMILY NOT NAMED,NULL,CUFF.41968.2
         (961 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17210.1 | Symbols: ATILP1, ILP1 | IAP-like protein 1 | chr1:...   797   0.0  
AT1G48950.1 | Symbols:  | C3HC zinc finger-like  | chr1:18107063...   185   1e-46

>AT1G17210.1 | Symbols: ATILP1, ILP1 | IAP-like protein 1 |
           chr1:5880502-5884657 REVERSE LENGTH=958
          Length = 958

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/858 (53%), Positives = 569/858 (66%), Gaps = 16/858 (1%)

Query: 79  SCRPWERCDLLRRLSTFKLAGKI--PKVAGSLACAKRGWVSVDVTKIECELCGAQLDFA- 135
           SCR W+R DLLRRL+TFK +  +  PK A SLACA++GWVSVD+ K++CE CG+ L ++ 
Sbjct: 80  SCRTWDRGDLLRRLATFKPSNWLGKPKTASSLACAQKGWVSVDLDKLQCEYCGSILQYSP 139

Query: 136 -MLSASSVEADTSSEELSKQLDRGHKIKCPWRGNSCPESLVQFPPTSPSALIGGFKDRCD 194
              S +  EADT+ E+ SKQLD  H+  CPW G SC ESLVQFPPT PSALIGG+KDRCD
Sbjct: 140 PQDSLNPPEADTTGEKFSKQLDDAHESSCPWVGKSCSESLVQFPPTPPSALIGGYKDRCD 199

Query: 195 GLLQFYSLPIVSSSAVEQMRISHNPQIDRFIAQLQVQTAGELGYKAEMGVTGEQAPYLYS 254
           GLLQFYSLPIVS SA++QMR S  PQIDR +A      +  +   +      E+A   YS
Sbjct: 200 GLLQFYSLPIVSPSAIDQMRASRRPQIDRLLAHANDDLSFRMDNISAAETYKEEAFSNYS 259

Query: 255 YAQKFISLCGWEPLWHSNILDCEEQSAESAKNGYSSCPAKGSA--PDSAPSRKEFSTSSR 312
            AQK ISLCGWEP W  NI DCEE SA+SA+NG  S PA+  +   D  PSRK+FS SSR
Sbjct: 260 RAQKLISLCGWEPRWLPNIQDCEEHSAQSARNGCPSGPARNQSRLQDPGPSRKQFSASSR 319

Query: 313 KDTGDNDVLGSEFNCESRSPLLDCSLCGATVRVWDFLTTPRPVHLAPCGIDTPQTSKKIA 372
           K +G+ +VLG E+  ESR PLLDCSLCG TVR+ DF+TT RPV  A    + P+TSKK+ 
Sbjct: 320 KASGNYEVLGPEYKSESRLPLLDCSLCGVTVRICDFMTTSRPVPFAAINANLPETSKKMG 379

Query: 373 STRGISAASGINELAAADGIEKERTGDRDEATTSNKGQFVSNKNLDLNLKVACGPSCSPK 432
            TRG SA SGIN   A +G+ +++  D DEA TS K + VSN  L      A   S +  
Sbjct: 380 VTRGTSATSGINGWFANEGMGQQQNEDVDEAETSVKRRLVSNVGLSFYQNAAGASSSAQL 439

Query: 433 NLISTVNHVQDASEGRFLMIGNPSASGVGDRAASNESQGPNARKRRLDDGAITIDRPHLS 492
           N+  T ++ Q +  G+ ++   PS S VGDRAAS ES+GP+ RKR LDDG  T+DRP+L 
Sbjct: 440 NMSVTRDNYQFSDRGKEVLWRQPSGSEVGDRAASYESRGPSTRKRSLDDGGSTVDRPYLR 499

Query: 493 MQQADSAERTIMDNEITDSQQFSAGPSKRARDTSLLETIQFPL-RNSTGALPIHSLDSQI 551
           +Q+ADS E T++D +  +    SAGPSKR R +   E   F   R+ +   P HSLD++ 
Sbjct: 500 IQRADSVEGTVVDRDGDEVNDDSAGPSKRTRGSDAHEAYPFLYGRDLSVGGPSHSLDAEN 559

Query: 552 EADPNIGNQLSSEKDHVVSMPSTRDISRASSVIAMNTIYHSSDDESMEXXXX------XX 605
           E + N  +  S   + V++ P  RD +RASSVIAM+TI HS++D+SME            
Sbjct: 560 EREVNRSDPFSEGNEQVMAFPGARDSTRASSVIAMDTICHSANDDSMESVENHPGDFDDI 619

Query: 606 XXXXXXXXXXXDMNETSELNSRYQAQQSACSQPLLGRAGGETGVSSSNACGEVLNTEILT 665
                      D N+ SELN   QAQQSAC QP   R   E G+SS N   EVLNTE +T
Sbjct: 620 NYPSVATAQSADFNDPSELNFSNQAQQSACFQPAPVRFNAEQGISSINDGEEVLNTETVT 679

Query: 666 THARGGPSFGISGGSVGMCASHEAEIHGTDASVHRGES-LGDVEPIAEVIENHGQASEFA 724
              R GPS G+SGGSVGM ASHEAEIHG D SVHRG+S +GD+EP+AEVIEN GQ+ EFA
Sbjct: 680 AQGRDGPSLGVSGGSVGMGASHEAEIHGADVSVHRGDSVVGDMEPVAEVIENLGQSGEFA 739

Query: 725 LNQGLTGDFVPEATSREYPQGDSQAVVSQSTARTDSGSKLIASTKVESVESGEKISGSME 784
            +QGLT DFVP    RE   GDSQ  VSQS  R DSGSK++ S K ESVESGEK+S ++ 
Sbjct: 740 PDQGLTDDFVPAEMDREGRLGDSQDRVSQSVVRADSGSKIVDSLKAESVESGEKMS-NIN 798

Query: 785 MQGHENSTHPSLSCNAVVCSAYEASKEEVTQTGKASYIDDGAYHESSHLSADVMGTPYTD 844
           +  +++S HPSLSCNA+VCS YEASKEEVTQT + S ++ G     S  +A+  G    D
Sbjct: 799 VLINDDSVHPSLSCNAIVCSGYEASKEEVTQTWE-SPLNAGFALPGSSYTANDQGPQNGD 857

Query: 845 NGNGGVEFDPIKLHNDYCPWVNGDVAAAGCDSPCSSSNMGTVALCGWQLTLDALDSFQSL 904
           + +  VEFDPIK HN YCPWVN +VAAAGC S  S S+    A+CGWQLTLDALDSFQSL
Sbjct: 858 SNDDIVEFDPIKYHNCYCPWVNENVAAAGCSSNSSGSSGFAEAVCGWQLTLDALDSFQSL 917

Query: 905 GHLPVQTLESESAASMCK 922
            +   QT+ESESAAS+CK
Sbjct: 918 ENPQNQTMESESAASLCK 935


>AT1G48950.1 | Symbols:  | C3HC zinc finger-like  |
           chr1:18107063-18110108 FORWARD LENGTH=594
          Length = 594

 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/311 (37%), Positives = 171/311 (54%), Gaps = 11/311 (3%)

Query: 63  DKSSADSHMVASNSNPS--CRPWERCDLLRRLSTFKLAGKI--PKVAGSLACAKRGWVSV 118
           D+SSA    V + ++PS  CRPW+R DL+RRL+TFK       P+V  ++ CA+RGWV+ 
Sbjct: 62  DRSSA--LKVPAGTSPSGLCRPWDRGDLMRRLATFKSMTWFAKPQVISAVNCARRGWVND 119

Query: 119 DVTKIECELCGAQLDFAMLSA-SSVEADTSSEELSKQLDRGHKIKCPWRGNSCPESLVQF 177
           D   I CE CGA L F+  S+ S  + + ++   S +L+ GHK+ CPW  NSC E+L +F
Sbjct: 120 DADSIACESCGAHLYFSAPSSWSKQQVEKAASVFSLKLESGHKLLCPWIENSCEETLSEF 179

Query: 178 PPTSPSALIGGFKDRCDGLLQFYSLPIVSSSAVEQMRISHNPQ-IDRFIAQLQVQTAGEL 236
           P  +P  L+   ++R + LLQ  +LP++S SA+E MR S   + + R IA     TA E 
Sbjct: 180 PLMAPQDLVDRHEERSEALLQLLALPVISPSAIEYMRSSDLEEFLKRPIAPACSDTAAES 239

Query: 237 GYKAEM-GVTGEQAPYLYSYAQKFISLCGWEPLWHSNILDCEEQSAESAKNGYSSCPAKG 295
                +    G     L+  AQK ISLCGWEP     I+DC+++ +E+A+   +      
Sbjct: 240 SQTESLTNHVGASPAQLFYQAQKLISLCGWEPRALPYIVDCKDKLSETARGTETIDLLPE 299

Query: 296 SAPDSAPSRKEFSTSSRKDTGDND--VLGSEFNCESRSPLLDCSLCGATVRVWDFLTTPR 353
           +A     S  E +      +G+N+   L    N +  S +LDC LCGA V +W F T PR
Sbjct: 300 TATRELLSISESTPIPNGISGNNENPTLPDTLNSDPSSVVLDCKLCGACVGLWVFSTVPR 359

Query: 354 PVHLAPCGIDT 364
           P+ L     DT
Sbjct: 360 PLELCRVTGDT 370