Miyakogusa Predicted Gene
- Lj3g3v0965970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0965970.1 Non Chatacterized Hit- tr|I1MJ62|I1MJ62_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,87,0,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; DYW_deaminase,NULL; no description,Tet,CUFF.41914.1
(578 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 506 e-143
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 486 e-137
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 474 e-134
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 473 e-133
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 459 e-129
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 458 e-129
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 448 e-126
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 446 e-125
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 445 e-125
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 442 e-124
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 441 e-123
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 436 e-122
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 435 e-122
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 434 e-121
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 431 e-121
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 430 e-120
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 430 e-120
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 427 e-119
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 426 e-119
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 424 e-119
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 422 e-118
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 421 e-118
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 421 e-118
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 419 e-117
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 418 e-117
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 416 e-116
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 415 e-116
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 412 e-115
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 412 e-115
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 408 e-114
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 407 e-114
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 406 e-113
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 406 e-113
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 404 e-113
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 403 e-112
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 403 e-112
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 402 e-112
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 402 e-112
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 400 e-111
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 400 e-111
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 399 e-111
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 397 e-111
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 395 e-110
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 389 e-108
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 388 e-108
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 387 e-107
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 383 e-106
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 381 e-106
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 380 e-105
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 377 e-104
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 374 e-104
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 373 e-103
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 372 e-103
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-101
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 360 1e-99
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 360 1e-99
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 6e-99
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 2e-98
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 351 8e-97
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 5e-96
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 5e-94
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 1e-93
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 1e-90
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 7e-90
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 325 6e-89
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 323 2e-88
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 322 5e-88
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 310 1e-84
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 303 3e-82
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 1e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 298 6e-81
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 6e-81
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 295 6e-80
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 294 1e-79
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 2e-79
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 292 5e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 290 2e-78
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 3e-78
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 5e-77
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 8e-77
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 2e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 7e-76
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 8e-76
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 1e-75
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 3e-75
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 6e-75
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 7e-75
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 274 1e-73
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 272 5e-73
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 9e-73
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 5e-72
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 268 7e-72
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 7e-72
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 6e-71
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 9e-71
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 7e-69
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 256 4e-68
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 5e-68
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 7e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 7e-67
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 4e-66
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 249 5e-66
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 5e-65
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 6e-65
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 7e-64
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 4e-62
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 7e-62
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 232 7e-61
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 4e-57
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 215 8e-56
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 4e-55
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 2e-54
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 5e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 196 4e-50
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 9e-50
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 2e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 2e-45
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 4e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 108 1e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 6e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 104 1e-22
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 2e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 8e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 9e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 5e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 5e-21
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 99 8e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 99 1e-20
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 95 1e-19
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 1e-19
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 8e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 90 4e-18
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 89 6e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 87 3e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 4e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 8e-16
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 81 2e-15
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 80 3e-15
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 9e-15
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 77 3e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 75 1e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 4e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 71 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 70 3e-12
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 69 6e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 4e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 66 6e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 8e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 9e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 55 1e-07
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 2e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 52 1e-06
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 506 bits (1302), Expect = e-143, Method: Compositional matrix adjust.
Identities = 235/580 (40%), Positives = 372/580 (64%), Gaps = 5/580 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV +AL+ AY + C+E R+ ++ + ++VSW + S + G ++ + +F
Sbjct: 181 DVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMF 240
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
++ G P+ VTVSS+LP+ + + LN G+ IHG+ ++ G++++ V SA++ MY +
Sbjct: 241 QKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKS 300
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
V ++F+ +A N +T N +K L +F + ++ + +W ++I
Sbjct: 301 GHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII 360
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRI 238
GC +NG+ E+LE+ R+MQ G KPN +TI S+LPAC + +L G+ H + +R H +
Sbjct: 361 AGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLL 420
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
++ +AL+ MYAKC +NLS+ VF+MMP K++V WN+++ +MHG KE + +FE++
Sbjct: 421 DNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
+R+ +KP+ ++FT +LS C L DEG + F M ++ ++P HYSCMV++ RAG+
Sbjct: 481 MRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGK 540
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L EAY I+ MP EP + WGALL +CR+ NV+LA+IAA+KLF +EP NPG YV L NI
Sbjct: 541 LQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNI 600
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
+ +W+E IR M+ G+ K PGCSW+QV NRV+T + GD+S+ D+I E +DE+
Sbjct: 601 YAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEI 660
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
++M+ +G++P+ D+ L DV+++E+ + L HSEKLAV FG+LN + ++V KNLRIC
Sbjct: 661 SKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRIC 720
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
GDCH IK++S+ G I +RD+ RFHHFK+G CSC D W
Sbjct: 721 GDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 111/416 (26%), Positives = 201/416 (48%), Gaps = 38/416 (9%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+D ++S LI +Y C A V + + S++SL L Q + +F M
Sbjct: 48 NDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRM 107
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+G+ P++ + ++ C+EL GK IH + G+ + FV ++ MY RC +
Sbjct: 108 FSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRM 167
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+AR VFD M +D V+ + +L AY E+ + + S M G++A+ +WN ++ G
Sbjct: 168 GDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGF 227
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIGDL 241
+G +E++ M +K+ +GF P+++T+SS+LP+ E L MG+ +H Y ++ + D
Sbjct: 228 NRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK 287
Query: 242 SSTTALVYMYAKCSDL-----------------------NLSRN--------VFDMMPKK 270
+A++ MY K + LSRN +F++ ++
Sbjct: 288 CVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQ 347
Query: 271 ----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEG 326
+VV+W ++I A +G EAL LF M +GVKPN VT +L C + + G
Sbjct: 348 TMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHG 407
Query: 327 LQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
R HL++ + + S ++D++++ GR++ + MP + W +L+
Sbjct: 408 RSTHGFAVRVHLLD-NVHVGSALIDMYAKCGRINLSQIVFNMMPTK-NLVCWNSLM 461
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 103/241 (42%), Gaps = 36/241 (14%)
Query: 94 HGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEY 153
H ++ G + ++ + L++ Y+ +A V +P S++ ++ A K +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSI 213
+ + +FSRM G+ P+ + ++
Sbjct: 98 TQSIGVFSRMFSHGL-----------------------------------IPDSHVLPNL 122
Query: 214 LPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDV 272
C+ L + ++GK++HC + D ++ +MY +C + +R VFD M KDV
Sbjct: 123 FKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDV 182
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNS 332
V + ++ A A G +E + + M SG++ N V++ G+LSG + S E + +F
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 333 M 333
+
Sbjct: 243 I 243
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +V + +ALI Y KC I ++ VF+ + +++V W SL + + G ++ ++IF
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARC 119
+ +KP+ ++ +S+L AC ++ + G K + +G+ + S +V++ R
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 120 LSVKEARAVFDLMPHR-DAVSWNGVLTA 146
++EA + MP D+ W +L +
Sbjct: 539 GKLQEAYDLIKEMPFEPDSCVWGALLNS 566
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 486 bits (1250), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/576 (42%), Positives = 355/576 (61%), Gaps = 27/576 (4%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
F+ +AL+ Y CK + RRVFD + R + W ++ + Y ++ L +F M +
Sbjct: 339 FVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES 398
Query: 66 -GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+ N+ T++ ++PAC + +AIHGF V+ G+ + FV + L+ MY+R +
Sbjct: 399 AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDI 458
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +F M RD V+WN ++T Y ++ +E L L +M K K
Sbjct: 459 AMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA---------- 508
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSS 243
++ KPN IT+ +ILP+C+ L +L GKE+H Y +++ + D++
Sbjct: 509 --------------SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+ALV MYAKC L +SR VFD +P+K+V+ WN +I+A MHGNG+EA+ L M+ GV
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KPN VTF V + CSHS +VDEGL+IF M D+ VEP ++HY+C+VD+ RAGR+ EAY
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 364 KFIQRMPLE-PTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ + MP + A AW +LLGA R+ N+E+ +IAA+ L +EPN +YV L NI SA
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
LW +A+++R MK++G+ K PGCSW++ G+ VH FV GD S+ S+K+ +L+ L ++M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 483 KLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCH 542
+ GY PDT VL +V+++EK LC HSEKLA+AFGILN + + IRV KNLR+C DCH
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCH 854
Query: 543 NAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
A K++S +V II+RD RFH FKNG CSC D W
Sbjct: 855 LATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 181/376 (48%), Gaps = 53/376 (14%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V ++N L++ Y KC +VFD + R+ VSW SL S + L F M
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD 192
Query: 65 NGVKPNAVTVSSILPACSEL---KDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
V+P++ T+ S++ ACS L + L GK +H + +R G + N F+ + LV+MY +
Sbjct: 193 ENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGK 251
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ ++ + RD V TWN V+
Sbjct: 252 LASSKVLLGSFGGRDLV-----------------------------------TWNTVLSS 276
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
+N Q E+LE LR+M G +P+E TISS+LPACS LE LR GKE+H Y L++ D
Sbjct: 277 LCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDE 336
Query: 242 SS--TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+S +ALV MY C + R VFD M + + WN MI + + + KEALLLF M
Sbjct: 337 NSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGME 396
Query: 300 RS-GVKPNSVTFTGVLSGCSHS-----RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
S G+ NS T GV+ C S + G + + RD V+ + ++D++
Sbjct: 397 ESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQ------NTLMDMY 450
Query: 354 SRAGRLDEAYKFIQRM 369
SR G++D A + +M
Sbjct: 451 SRLGKIDIAMRIFGKM 466
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 170/348 (48%), Gaps = 51/348 (14%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D F+ N L+ Y + I+ A R+F + RD+V+W ++ + YV L + H
Sbjct: 436 LDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLH 495
Query: 61 EM---------GWNGV--KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVC 109
+M G + V KPN++T+ +ILP+C+ L L GK IH +A+++ + +V V
Sbjct: 496 KMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVG 555
Query: 110 SALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVK 169
SALV MYA+C ++ +R VFD +P ++ ++WN ++ AY + ++ + L M +GVK
Sbjct: 556 SALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Query: 170 ADKATWNAVIGGCMENGQTEESLEMLRKMQK-MGFKPNEITISSILPACSILESLRMGKE 228
++ T+ +V C +G +E L + M+ G +P SS AC + R G+
Sbjct: 616 PNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEP-----SSDHYACVVDLLGRAGRI 670
Query: 229 VHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK--KDVVAWNTMIIANAMHG 286
Y L +MMP+ AW++++ A+ +H
Sbjct: 671 KEAYQL-----------------------------MNMMPRDFNKAGAWSSLLGASRIHN 701
Query: 287 NGKEALLLFENMLRSGVKPNSVTFTGVLSGC-SHSRLVDEGLQIFNSM 333
N + + +N+++ ++PN + +L+ S + L D+ ++ +M
Sbjct: 702 NLEIGEIAAQNLIQ--LEPNVASHYVLLANIYSSAGLWDKATEVRRNM 747
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 151/321 (47%), Gaps = 43/321 (13%)
Query: 39 WTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAV 98
W L V L R+ + + +M G+KP+ ++L A ++L+D+ GK IH
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 99 RHGM-VENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGL 157
+ G V++V V + LV++Y +C VFD + R+ VSWN ++++ + +++E L
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 158 ALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
F M E V +P+ T+ S++ AC
Sbjct: 185 EAFRCMLDENV-----------------------------------EPSSFTLVSVVTAC 209
Query: 218 SIL---ESLRMGKEVHCYGLRHRIGDLSS--TTALVYMYAKCSDLNLSRNVFDMMPKKDV 272
S L E L MGK+VH YGLR G+L+S LV MY K L S+ + +D+
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRK--GELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNS 332
V WNT++ + + EAL M+ GV+P+ T + VL CSH ++ G ++
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 333 MGRDHLVEPDANHYSCMVDVF 353
++ ++ ++ S +VD++
Sbjct: 328 ALKNGSLDENSFVGSALVDMY 348
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 115/237 (48%), Gaps = 19/237 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +DV + +AL+ Y KC C++ +R+VFD + ++V++W + Y G ++ + +
Sbjct: 548 LATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLR 607
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARC 119
M GVKPN VT S+ ACS ++ G + + +G+ + + +V + R
Sbjct: 608 MMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRA 667
Query: 120 LSVKEARAVFDLMPHRD---AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+KEA + ++MP RD A +W+ +L A + E G + + ++ + A+
Sbjct: 668 GRIKEAYQLMNMMP-RDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQ--LEPNVASHY 724
Query: 177 AVIGGCMEN-GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
++ + G +++ E+ R M++ G + P CS +E G EVH +
Sbjct: 725 VLLANIYSSAGLWDKATEVRRNMKEQGVRKE--------PGCSWIEH---GDEVHKF 770
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 198 MQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTA--LVYMYAKCS 255
M +G KP+ ++L A + L+ + +GK++H + + G S T A LV +Y KC
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 147
Query: 256 DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLS 315
D VFD + +++ V+WN++I + + AL F ML V+P+S T V++
Sbjct: 148 DFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVT 207
Query: 316 GCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRL 359
CS+ + EGL + + L + + N + + +V ++ + G+L
Sbjct: 208 ACSNLPM-PEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKL 252
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 231/579 (39%), Positives = 365/579 (63%), Gaps = 7/579 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDVF++N+LIH Y C ++ A +VF + +DVVSW S+ + +V G P + L +F +M
Sbjct: 164 SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKM 223
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
VK + VT+ +L AC+++++L G+ + + + + N+ + +A++ MY +C S+
Sbjct: 224 ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSI 283
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++A+ +FD M +D V+W +L Y +++YE + + M ++ + A WNA+I
Sbjct: 284 EDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA----WNALISAY 339
Query: 183 MENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-D 240
+NG+ E+L + ++Q + K N+IT+ S L AC+ + +L +G+ +H Y +H I +
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMN 399
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
T+AL++MY+KC DL SR VF+ + K+DV W+ MI AMHG G EA+ +F M
Sbjct: 400 FHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQE 459
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+ VKPN VTFT V CSH+ LVDE +F+ M ++ + P+ HY+C+VDV R+G L+
Sbjct: 460 ANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
+A KFI+ MP+ P+ S WGALLGAC++ N+ LA++A +L ++EP N G +V L NI
Sbjct: 520 KAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYA 579
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
W S++R M+ G+ K PGCS +++ +H F+ GD ++ S+K+Y L E+ +
Sbjct: 580 KLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVME 639
Query: 481 KMKLAGYKPDTDYVLQDVDQEE-KAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
K+K GY+P+ VLQ +++EE K +SL HSEKLA+ +G+++ IRV KNLR+CG
Sbjct: 640 KLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCG 699
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH+ K +S + IIVRD RFHHF+NG CSC D W
Sbjct: 700 DCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 179/365 (49%), Gaps = 7/365 (1%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM-GWNGVKPNAVTVSSILP 79
+E AR+VFD++ + +W +L Y + P + F +M + PN T ++
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 80 ACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVS 139
A +E+ L+ G+++HG AV+ + +VFV ++L+ Y C + A VF + +D VS
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 140 WNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ 199
WN ++ + +K L LF +M E VKA T V+ C + E ++ ++
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 200 KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNL 259
+ N +++L + S+ K + + +++ TT ++ YA D
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRL--FDAMEEKDNVTWTT-MLDGYAISEDYEA 316
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM-LRSGVKPNSVTFTGVLSGCS 318
+R V + MP+KD+VAWN +I A +G EAL++F + L+ +K N +T LS C+
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 319 HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAW 378
++ G I +S + H + + + S ++ ++S+ G L+++ + + + W
Sbjct: 377 QVGALELGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVW 434
Query: 379 GALLG 383
A++G
Sbjct: 435 SAMIG 439
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 163/350 (46%), Gaps = 49/350 (14%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA--RCLSVKEARAVFDLMP 133
S++ C L+ L K HG +R G + + S L +M A S++ AR VFD +P
Sbjct: 35 SLIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 134 HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLE 193
++ +WN ++ AY + + + F L+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAF-------------------------------LD 120
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYA 252
M+ + Q PN+ T ++ A + + SL +G+ +H ++ +G D+ +L++ Y
Sbjct: 121 MVSESQ---CYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 177
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
C DL+ + VF + +KDVV+WN+MI G+ +AL LF+ M VK + VT G
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
VLS C+ R ++ G Q+ + + ++ V + + M+D++++ G +++A + M E
Sbjct: 238 VLSACAKIRNLEFGRQVCSYI-EENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-E 295
Query: 373 PTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
W +L + ++ E A+ ++ + P + +N L+SA
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAR-------EVLNSMPQKDIVAWNALISA 338
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 473 bits (1217), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/559 (41%), Positives = 341/559 (61%), Gaps = 36/559 (6%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPA 80
I+ RRVF+ + +DVVS+ ++ + Y G+ L + EMG +KP++ T+SS+LP
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 81 CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSW 140
SE D+ GK IHG+ +R G+ +V++ S+LV MYA+ ++++ VF + RD +S
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS- 310
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
WN+++ G ++NG+ E+L + R+M
Sbjct: 311 ----------------------------------WNSLVAGYVQNGRYNEALRLFRQMVT 336
Query: 201 MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNL 259
KP + SS++PAC+ L +L +GK++H Y LR G ++ +ALV MY+KC ++
Sbjct: 337 AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKA 396
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
+R +FD M D V+W +I+ +A+HG+G EA+ LFE M R GVKPN V F VL+ CSH
Sbjct: 397 ARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSH 456
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWG 379
LVDE FNSM + + + + HY+ + D+ RAG+L+EAY FI +M +EPT S W
Sbjct: 457 VGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWS 516
Query: 380 ALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRG 439
LL +C V KN+ELA+ A+K+F ++ N G YV + N+ S W E +++R+ M+ +G
Sbjct: 517 TLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKG 576
Query: 440 ITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVD 499
+ K P CSW+++ N+ H FV GDRS+ DKI EFL + ++M+ GY DT VL DVD
Sbjct: 577 LRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVD 636
Query: 500 QEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVR 559
+E K E L HSE+LAVAFGI+N ++IRV KN+RIC DCH AIK++S + IIVR
Sbjct: 637 EEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVR 696
Query: 560 DSLRFHHFKNGNCSCQDLW 578
D+ RFHHF GNCSC D W
Sbjct: 697 DNSRFHHFNRGNCSCGDYW 715
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 190/361 (52%), Gaps = 12/361 (3%)
Query: 28 FDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDL 87
F L V++W S+ C+ + L + LA F EM +G P+ S+L +C+ + DL
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 88 NSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA---VFDLMPHRDAVSWNGVL 144
G+++HGF VR GM +++ +AL++MYA+ L + + VFD MP R + S + +
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 145 TAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFK 204
A + G+ R+ + D ++N +I G ++G E++L M+R+M K
Sbjct: 182 KAETCIMPF--GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 205 PNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNV 263
P+ T+SS+LP S + GKE+H Y +R I D+ ++LV MYAK + + S V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 264 FDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLV 323
F + +D ++WN+++ +G EAL LF M+ + VKP +V F+ V+ C+H +
Sbjct: 300 FSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 324 DEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
G Q+ + R +N + S +VD++S+ G + A K RM + S W A+
Sbjct: 360 HLGKQLHGYVLRGGF---GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVS-WTAI 415
Query: 382 L 382
+
Sbjct: 416 I 416
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 115/199 (57%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDV++ ++L+ Y K IE + RVF L RD +SW SL + YV G + L +F +M
Sbjct: 275 SDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM 334
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
VKP AV SS++PAC+ L L+ GK +HG+ +R G N+F+ SALV MY++C ++
Sbjct: 335 VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNI 394
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
K AR +FD M D VSW ++ + + + ++LF M R+GVK ++ + AV+ C
Sbjct: 395 KAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Query: 183 MENGQTEESLEMLRKMQKM 201
G +E+ M K+
Sbjct: 455 SHVGLVDEAWGYFNSMTKV 473
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 459 bits (1180), Expect = e-129, Method: Compositional matrix adjust.
Identities = 240/577 (41%), Positives = 344/577 (59%), Gaps = 37/577 (6%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S V +S AL+ Y KC +E AR++FD ++ R+VVSW S+ YV P++ + IF +M
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
GVKP V+V L AC++L DL G+ IH +V G+ NV V ++L+SMY +C V
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEV 388
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A ++F + R VS WNA+I G
Sbjct: 389 DTAASMFGKLQSRTLVS-----------------------------------WNAMILGF 413
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
+NG+ ++L +M+ KP+ T S++ A + L K +H +R + ++
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV 473
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
TTALV MYAKC + ++R +FDMM ++ V WN MI HG GK AL LFE M +
Sbjct: 474 FVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKG 533
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
+KPN VTF V+S CSHS LV+ GL+ F M ++ +E +HY MVD+ RAGRL+E
Sbjct: 534 TIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNE 593
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A+ FI +MP++P + +GA+LGAC++ KNV A+ AA++LF++ P++ G +V L NI +
Sbjct: 594 AWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRA 653
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
A +W + Q+R+ M +G+ KTPGCS +++ N VH+F G ++ S KIY FL++L
Sbjct: 654 ASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICH 713
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
+K AGY PDT+ VL V+ + K + L HSEKLA++FG+LN ++I V KNLR+C DC
Sbjct: 714 IKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADC 772
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
HNA KY+S V G I+VRD RFHHFKNG CSC D W
Sbjct: 773 HNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 187/378 (49%), Gaps = 38/378 (10%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
F L+ + + ++ A RVF+ + + V + ++ + + L F M ++
Sbjct: 70 FFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD 129
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
V+P + +L C + +L GK IHG V+ G ++F + L +MYA+C V EA
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R VFD MP RD VSWN ++ Y +N
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGY-----------------------------------SQN 214
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS-T 244
G +LEM++ M + KP+ ITI S+LPA S L + +GKE+H Y +R L + +
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
TALV MYAKC L +R +FD M +++VV+WN+MI A + N KEA+L+F+ ML GVK
Sbjct: 275 TALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK 334
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P V+ G L C+ ++ G + + + + ++ + + + ++ ++ + +D A
Sbjct: 335 PTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAAS 393
Query: 365 FIQRMPLEPTASAWGALL 382
++ T +W A++
Sbjct: 394 MFGKLQ-SRTLVSWNAMI 410
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 194/382 (50%), Gaps = 42/382 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+F L + Y KC+ + AR+VFD + RD+VSW ++ + Y G+ R L + M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+KP+ +T+ S+LPA S L+ ++ GK IHG+A+R G V + +ALV MYA+C S++
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR +FD M R+ VSWN ++ AY N+ ++ + +F +M EGV
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV--------------- 333
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
KP ++++ L AC+ L L G+ +H + + ++S
Sbjct: 334 --------------------KPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVS 373
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L+ MY KC +++ + ++F + + +V+WN MI+ A +G +AL F M
Sbjct: 374 VVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT 433
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLD 360
VKP++ T+ V++ + + I + R L D N + + +VD++++ G +
Sbjct: 434 VKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL---DKNVFVTTALVDMYAKCGAIM 490
Query: 361 EAYKFIQRMPLEPTASAWGALL 382
A + I M E + W A++
Sbjct: 491 IA-RLIFDMMSERHVTTWNAMI 511
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +VF++ AL+ Y KC I AR +FD + R V +W ++ Y G + L +F
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFV------CSALVS 114
EM +KPN VT S++ ACS +SG G + M EN + A+V
Sbjct: 529 EMQKGTIKPNGVTFLSVISACS-----HSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 115 MYARCLSVKEARAVFDLMPHRDAVSWNGVL 144
+ R + EA MP + AV+ G +
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 458 bits (1179), Expect = e-129, Method: Compositional matrix adjust.
Identities = 239/607 (39%), Positives = 344/607 (56%), Gaps = 39/607 (6%)
Query: 11 LIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPN 70
L+ AY K + AR+VFD++ R+V+ + YVN G +G+ +F M V+P+
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 71 AVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD 130
T +L ACS + G+ IHG A + G+ +FV + LVSMY +C + EAR V D
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 131 LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT---------------- 174
M RD VSWN ++ Y N+ ++ L + M + D T
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 175 -----------------WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
WN +IG M+N E++E+ +M+ GF+P+ ++I+S+LPAC
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 218 SILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWN 276
+L +GK++H Y R + I +L AL+ MYAKC L +R+VF+ M +DVV+W
Sbjct: 320 GDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWT 379
Query: 277 TMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRD 336
MI A G G +A+ LF + SG+ P+S+ F L+ CSH+ L++EG F M
Sbjct: 380 AMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDH 439
Query: 337 HLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKI 396
+ + P H +CMVD+ RAG++ EAY+FIQ M +EP WGALLGACRV + ++ +
Sbjct: 440 YKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLL 499
Query: 397 AAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVH 456
AA KLF + P G YV L NI A W E + IR +MK +G+ K PG S ++V +H
Sbjct: 500 AADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIH 559
Query: 457 TFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAV 516
TF+VGDRS+ SD+IY LD L +KMK GY PD++ L DV++E+K L HSEKLA+
Sbjct: 560 TFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAI 619
Query: 517 AFGILNL-----NGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGN 571
F ++N + ++IR+ KNLRICGDCH A K +S + II+RD+ RFH F+ G
Sbjct: 620 VFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGV 679
Query: 572 CSCQDLW 578
CSC D W
Sbjct: 680 CSCGDYW 686
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 135/309 (43%), Gaps = 52/309 (16%)
Query: 86 DLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLT 145
D+ + + +H + + N + L+ YA V AR VFD +P R+ + N ++
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 146 AYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKP 205
+Y N Y +G+ +F M GC +P
Sbjct: 114 SYVNNGFYGEGVKVFGTMC----------------GC-------------------NVRP 138
Query: 206 NEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST----TALVYMYAKCSDLNLSR 261
+ T +L ACS ++ +G+++H G ++G LSST LV MY KC L+ +R
Sbjct: 139 DHYTFPCVLKACSCSGTIVIGRKIH--GSATKVG-LSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSR 321
V D M ++DVV+WN++++ A + +AL + M + ++ T +L S++
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTT 255
Query: 322 L--VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTAS 376
V +F MG+ LV ++ M+ V+ + EA + RM EP A
Sbjct: 256 TENVMYVKDMFFKMGKKSLVS-----WNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAV 310
Query: 377 AWGALLGAC 385
+ ++L AC
Sbjct: 311 SITSVLPAC 319
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 102/209 (48%), Gaps = 5/209 (2%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ ++ L NALI Y KC C+E AR VF+++ RDVVSWT++ S Y G +A+F
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRH-GMVENVFVCSALVSMYARC 119
++ +G+ P+++ + L ACS L G++ H + + + +V + R
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 120 LSVKEA-RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
VKEA R + D+ + W +L A + + + GL ++ + + +++ + +
Sbjct: 460 GKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVL 517
Query: 179 IGGCM-ENGQTEESLEMLRKMQKMGFKPN 206
+ + G+ EE + M+ G K N
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKN 546
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 448 bits (1153), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/572 (38%), Positives = 338/572 (59%), Gaps = 37/572 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N L+ Y KC ++ A+ VF ++ R VVS+TS+ + Y GL + + +F EM G+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ TV+++L C+ + L+ GK +H + + + ++FV +AL+ MYA+C S++EA V
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F M +D +SW N +IGG +N
Sbjct: 455 FSEMRVKDIISW-----------------------------------NTIIGGYSKNCYA 479
Query: 189 EESLEMLRKM-QKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIGDLSSTTA 246
E+L + + ++ F P+E T++ +LPAC+ L + G+E+H Y +R+ D +
Sbjct: 480 NEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANS 539
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
LV MYAKC L L+ +FD + KD+V+W MI MHG GKEA+ LF M ++G++ +
Sbjct: 540 LVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEAD 599
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFI 366
++F +L CSHS LVDEG + FN M + +EP HY+C+VD+ +R G L +AY+FI
Sbjct: 600 EISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFI 659
Query: 367 QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWS 426
+ MP+ P A+ WGALL CR+ +V+LA+ A+K+F++EP N G YV + NI A+ W
Sbjct: 660 ENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWE 719
Query: 427 EASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAG 486
+ ++R + RG+ K PGCSW+++ RV+ FV GD SN ++ I FL ++ +M G
Sbjct: 720 QVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEG 779
Query: 487 YKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIK 546
Y P T Y L D ++ EK E+LC HSEKLA+A GI++ IRV KNLR+CGDCH K
Sbjct: 780 YSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAK 839
Query: 547 YMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+MS + I++RDS RFH FK+G+CSC+ W
Sbjct: 840 FMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 215/475 (45%), Gaps = 76/475 (16%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L + L Y C ++ A RVFD++ + W L + G + +F +M
Sbjct: 128 DSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMM 187
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+GV+ ++ T S + + S L+ ++ G+ +HGF ++ G E V ++LV+ Y + V
Sbjct: 188 SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR VFD M RD +SWN ++ Y +N EKGL++F +M G++ D AT +V GC
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA 307
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
++ + + R + +G K C+ R
Sbjct: 308 DS----RLISLGRAVHSIGVKA-------------------------CFSREDRF----- 333
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
L+ MY+KC DL+ ++ VF M + VV++ +MI A G EA+ LFE M G+
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIF-----NSMGRDHLVEPDANHYSCMVDVFSRAGR 358
P+ T T VL+ C+ RL+DEG ++ N +G D V + ++D++++ G
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS------NALMDMYAKCGS 447
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
+ EA M ++ S W ++G +K + E +SLFN+
Sbjct: 448 MQEAELVFSEMRVKDIIS-WNTIIGG------------YSKNCYANEA------LSLFNL 488
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQV---GNRVHTFVVGDRSNTGSDK 470
L+ K +S + + P C+ L G +H +++ R+ SD+
Sbjct: 489 LLEEKRFSPDERTVACV-------LPACASLSAFDKGREIHGYIM--RNGYFSDR 534
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 113/197 (57%), Gaps = 1/197 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH-EM 62
D+F+SNAL+ Y KC ++ A VF ++ +D++SW ++ Y + L++F+ +
Sbjct: 431 DIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLL 490
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
P+ TV+ +LPAC+ L + G+ IHG+ +R+G + V ++LV MYA+C ++
Sbjct: 491 EEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A +FD + +D VSW ++ Y + ++ +ALF++M + G++AD+ ++ +++ C
Sbjct: 551 LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
Query: 183 MENGQTEESLEMLRKMQ 199
+G +E M+
Sbjct: 611 SHSGLVDEGWRFFNIMR 627
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 37/315 (11%)
Query: 73 TVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM 132
T+ S+L C++ K L GK + F +G V + + S L MY C +KEA VFD +
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
A+ WN ++ + ++ + LF +M GV+ D T+
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF----------------- 198
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMY 251
S + + S L S+ G+++H + L+ G+ +S +LV Y
Sbjct: 199 ------------------SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFY 240
Query: 252 AKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
K ++ +R VFD M ++DV++WN++I +G ++ L +F ML SG++ + T
Sbjct: 241 LKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIV 300
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
V +GC+ SRL+ G + +S+G + + ++D++S+ G LD A + M
Sbjct: 301 SVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
Query: 372 EPTASAWGALLGACR 386
S + G R
Sbjct: 360 RSVVSYTSMIAGYAR 374
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 7/201 (3%)
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR--IGDL 241
E+G E ++++L K P T+ S+L C+ +SL+ GKEV + +R + D
Sbjct: 73 ESGNLENAVKLLCVSGKWDIDPR--TLCSVLQLCADSKSLKDGKEVDNF-IRGNGFVIDS 129
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ + L MY C DL + VFD + + + WN ++ A G+ ++ LF+ M+ S
Sbjct: 130 NLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS 189
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
GV+ +S TF+ V S R V G Q+ + + E ++ S +V + + R+D
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS-LVAFYLKNQRVDS 248
Query: 362 AYKFIQRMPLEPTASAWGALL 382
A K M E +W +++
Sbjct: 249 ARKVFDEMT-ERDVISWNSII 268
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD ++N+L+ Y KC + A +FDD+ +D+VSWT + + Y G ++ +A+F++M
Sbjct: 532 SDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLS 121
G++ + ++ S+L ACS ++ G +E V + +V M AR
Sbjct: 592 RQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGD 651
Query: 122 VKEARAVFDLMP-HRDAVSWNGVL 144
+ +A + MP DA W +L
Sbjct: 652 LIKAYRFIENMPIPPDATIWGALL 675
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 446 bits (1148), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/612 (37%), Positives = 357/612 (58%), Gaps = 47/612 (7%)
Query: 7 LSNALIHAYGKC----KCIEGARRVFDDLVGRDVVSWTSLS------------------- 43
+SNAL+ Y KC + AR+VFD+++ +D SWT++
Sbjct: 186 VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 44 -------------SCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSG 90
S YVN G ++ L + M +G++ + T S++ AC+ L G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
K +H + +R F ++LVS+Y +C EARA+F+ MP +D VSWN +L+ Y ++
Sbjct: 306 KQVHAYVLRREDFSFHFD-NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSS 364
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
+ +F M + + +W +I G ENG EE L++ M++ GF+P +
Sbjct: 365 GHIGEAKLIFKEMKEKNI----LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDMM 267
S + +C++L + G++ H L+ IG LS+ AL+ MYAKC + +R VF M
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 268 PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL 327
P D V+WN +I A HG+G EA+ ++E ML+ G++P+ +T VL+ CSH+ LVD+G
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGR 538
Query: 328 QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRV 387
+ F+SM + + P A+HY+ ++D+ R+G+ +A I+ +P +PTA W ALL CRV
Sbjct: 539 KYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRV 598
Query: 388 FKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCS 447
N+EL IAA KLF + P + G Y+ L N+ + W E +++R LM+DRG+ K CS
Sbjct: 599 HGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACS 658
Query: 448 WLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQE-EKAES 506
W+++ +VHTF+V D S+ ++ +Y +L +LG++M+ GY PDT +VL DV+ + K +
Sbjct: 659 WIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDM 718
Query: 507 LCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHH 566
L HSEK+AVAFG++ L ++IR+FKNLR CGDCHN +++S VV II+RD RFHH
Sbjct: 719 LTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHH 778
Query: 567 FKNGNCSCQDLW 578
F+NG CSC + W
Sbjct: 779 FRNGECSCGNFW 790
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 198/456 (43%), Gaps = 96/456 (21%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCG---LPR------------ 53
N LI Y K + AR++FD++ D ++ T++ S Y G L R
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 54 ------------------QGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSG-KAIH 94
+ +F +M G KP+ T +S+L + + D H
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFH 172
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLS----VKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
A++ G V +ALVS+Y++C S + AR VFD + +D SW ++T Y N
Sbjct: 173 AAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN 232
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
++ G L M + +K +NA+I G + G +E+LEM+R+M G + +E T
Sbjct: 233 GYFDLGEELLEGMD-DNMKL--VAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTY 289
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
S++ AC+ L++GK+VH Y LR +LV +Y KC + +R +F+ MP K
Sbjct: 290 PSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAK 349
Query: 271 DVVAWNT-------------------------------MIIANAMHGNGKEALLLFENML 299
D+V+WN MI A +G G+E L LF M
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 300 RSGVKPNSVTFTGVLSGCS-----------HSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
R G +P F+G + C+ H++L+ G S G +
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAG------------NA 457
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
++ ++++ G ++EA + + MP + S W AL+ A
Sbjct: 458 LITMYAKCGVVEEARQVFRTMPCLDSVS-WNALIAA 492
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 171/383 (44%), Gaps = 54/383 (14%)
Query: 67 VKPNAVTVSSI-------LPACSELK--DLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
++PN V +I L C L+ L +A+HG + G + + L+ +Y
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
+ + AR +FD + D ++ +++ Y + + +F + D +NA
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNA 118
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL-ESLRMGKEVHCYGLRH 236
+I G N ++ + KM+ GFKP+ T +S+L +++ + + + H L+
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKS 178
Query: 237 RIGDLSSTT-ALVYMYAKCSD----LNLSRNVFDMMPKKDVVAWNTMIIA---------- 281
G ++S + ALV +Y+KC+ L+ +R VFD + +KD +W TM+
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 282 ----------------NAM------HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
NAM G +EAL + M+ SG++ + T+ V+ C+
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHY-SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAW 378
+ L+ G Q+ + R E + H+ + +V ++ + G+ DEA ++MP + S W
Sbjct: 299 AGLLQLGKQVHAYVLRR---EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVS-W 354
Query: 379 GALLGACRVFKNVELAKIAAKKL 401
ALL ++ AK+ K++
Sbjct: 355 NALLSGYVSSGHIGEAKLIFKEM 377
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 446 bits (1147), Expect = e-125, Method: Compositional matrix adjust.
Identities = 230/577 (39%), Positives = 332/577 (57%), Gaps = 38/577 (6%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+L L+ YGKC C+E AR+V D++ ++VVSWT++ S Y G + L +F EM
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ KPN T +++L +C L GK IHG V+ ++FV S+L+ MYA+ +KE
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
AR +F+ +P RD VS A+I G +
Sbjct: 207 AREIFECLPERDVVSCT-----------------------------------AIIAGYAQ 231
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS- 243
G EE+LEM ++ G PN +T +S+L A S L L GK+ HC+ LR + +
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVL 291
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RSG 302
+L+ MY+KC +L+ +R +FD MP++ ++WN M++ + HG G+E L LF M
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM-GRDHLVEPDANHYSCMVDVFSRAGRLDE 361
VKP++VT VLSGCSH R+ D GL IF+ M ++ +P HY C+VD+ RAGR+DE
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A++FI+RMP +PTA G+LLGACRV +V++ + ++L +IEP N GNYV L N+ S
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
A W++ + +R +M + +TK PG SW+Q +H F DR++ +++ + E+ K
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
MK AGY PD VL DVD+E+K + L HSEKLA+ FG++ IRVFKNLRIC DC
Sbjct: 532 MKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDC 591
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
HN K S V + +RD RFH +G CSC D W
Sbjct: 592 HNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 152/327 (46%), Gaps = 53/327 (16%)
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EMG++G ++L AC + + L G+ +H ++ + ++ + L+ Y +C
Sbjct: 49 EMGFHGY-------DALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCD 101
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+++AR V D MP ++ VSW +++ Y + L +F+ M R K
Sbjct: 102 CLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK----------- 150
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIG 239
PNE T +++L +C L +GK++H ++ +
Sbjct: 151 ------------------------PNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ ++L+ MYAK + +R +F+ +P++DVV+ +I A G +EAL +F +
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC----MVDVFSR 355
G+ PN VT+ +L+ S L+D G Q H++ + Y+ ++D++S+
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDMYSK 301
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALL 382
G L A + MP E TA +W A+L
Sbjct: 302 CGNLSYARRLFDNMP-ERTAISWNAML 327
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 143/309 (46%), Gaps = 41/309 (13%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S +F+ ++L+ Y K I+ AR +F+ L RDVVS T++ + Y GL + L +FH +
Sbjct: 186 SHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRL 245
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G+ PN VT +S+L A S L L+ GK H +R + + ++L+ MY++C ++
Sbjct: 246 HSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 305
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAVIGG 181
AR +FD MP R A+SWN +L Y + + L LF M E VK D T AV+ G
Sbjct: 306 SYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 365
Query: 182 C----MEN---------------------------------GQTEESLEMLRKMQKMGFK 204
C ME+ G+ +E+ E +++M K
Sbjct: 366 CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPS---K 422
Query: 205 PNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVF 264
P + S+L AC + S+ +G+ V + + + L +YA NV
Sbjct: 423 PTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVR 482
Query: 265 DMMPKKDVV 273
MM +K V
Sbjct: 483 AMMMQKAVT 491
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 124/252 (49%), Gaps = 15/252 (5%)
Query: 185 NGQTEESL-EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
NG+ +E+L EM +MGF + ++L AC +LR G+ VH + ++ R L +
Sbjct: 33 NGRLQEALLEMAMLGPEMGFHGYD----ALLNACLDKRALRDGQRVHAHMIKTRY--LPA 86
Query: 244 T---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
T T L+ Y KC L +R V D MP+K+VV+W MI + G+ EAL +F M+R
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGR 358
S KPN TF VL+ C + + G QI + + + D++ + S ++D++++AG+
Sbjct: 147 SDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY---DSHIFVGSSLLDMYAKAGQ 203
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
+ EA + + +P S + G ++ + E ++ + + N Y SL
Sbjct: 204 IKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTA 263
Query: 419 LVSAKLWSEASQ 430
L L Q
Sbjct: 264 LSGLALLDHGKQ 275
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 445 bits (1145), Expect = e-125, Method: Compositional matrix adjust.
Identities = 240/627 (38%), Positives = 350/627 (55%), Gaps = 53/627 (8%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE-- 61
DV N ++ Y + C++ AR VFD + ++ VSW +L S YV + +F
Sbjct: 156 DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE 215
Query: 62 ----MGWNGVKPNAVTVSSILPACSELKDLNS------GKAIHGFA-----------VRH 100
+ WN + V I+ A +N I G+A
Sbjct: 216 NWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE 275
Query: 101 GMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALF 160
V++VF +A+VS Y + V+EAR +FD MP R+ VSWN +L Y + E LF
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 161 SRMSREGV---------------------------KADKATWNAVIGGCMENGQTEESLE 193
M V K D +W A+I G ++G + E+L
Sbjct: 336 DVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALR 395
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR--HRIGDLSSTTALVYMY 251
+ +M++ G + N + SS L C+ + +L +GK++H ++ + G AL+ MY
Sbjct: 396 LFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGN-ALLLMY 454
Query: 252 AKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
KC + + ++F M KD+V+WNTMI + HG G+ AL FE+M R G+KP+ T
Sbjct: 455 CKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMV 514
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
VLS CSH+ LVD+G Q F +M +D+ V P++ HY+CMVD+ RAG L++A+ ++ MP
Sbjct: 515 AVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPF 574
Query: 372 EPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQI 431
EP A+ WG LLGA RV N ELA+ AA K+F +EP N G YV L N+ S+ W + ++
Sbjct: 575 EPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKL 634
Query: 432 RILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDT 491
R+ M+D+G+ K PG SW+++ N+ HTF VGD + D+I+ FL+EL +MK AGY T
Sbjct: 635 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 694
Query: 492 DYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNV 551
VL DV++EEK + HSE+LAVA+GI+ ++ IRV KNLR+C DCHNAIKYM+ +
Sbjct: 695 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 754
Query: 552 VGVTIIVRDSLRFHHFKNGNCSCQDLW 578
G II+RD+ RFHHFK+G+CSC D W
Sbjct: 755 TGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 141/569 (24%), Positives = 235/569 (41%), Gaps = 124/569 (21%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+ N I +Y + A RVF + VS+ + S Y+ G +F EM
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCS--ALVSMYARCL 120
P VS + +++ N GKA F + M E VCS ++S YA+
Sbjct: 122 ------PERDLVSWNVMIKGYVRNRNLGKARELFEI---MPERD-VCSWNTMLSGYAQNG 171
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG------------- 167
V +AR+VFD MP ++ VSWN +L+AY N + E+ LF SRE
Sbjct: 172 CVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK--SRENWALVSWNCLLGGF 229
Query: 168 ------VKA----------DKATWNAVIGGCMENGQTEESLEML---------------- 195
V+A D +WN +I G ++G+ +E+ ++
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 196 -----------RKMQKMGFKPNEITISSILPACSILESLRMGKEVH----CYGLRHRIGD 240
R++ + NE++ +++L E + M KE+ C +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-------N 342
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+S+ ++ YA+C ++ ++N+FD MPK+D V+W MI + G+ EAL LF M R
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 301 SGVKPNSVTFTGVLSGCS-----------HSRLVDEGLQIFNSMGR-------------- 335
G + N +F+ LS C+ H RLV G + +G
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 336 -----DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGACRV 387
+ D ++ M+ +SR G + A +F + M L+P + A+L AC
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 388 FKNVELAK---IAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTP 444
V+ + + + + PN+ +Y + ++L A L +A LMK+
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQ-HYACMVDLLGRAGLLEDAHN---LMKNMPFEPDA 578
Query: 445 GCSWLQVG-NRVHTFVVGDRSNTGSDKIY 472
+G +RVH + + T +DKI+
Sbjct: 579 AIWGTLLGASRVHGNT--ELAETAADKIF 605
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 442 bits (1136), Expect = e-124, Method: Compositional matrix adjust.
Identities = 219/580 (37%), Positives = 348/580 (60%), Gaps = 36/580 (6%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S++F+SN LI Y + + ++VFD + RD++SW S+ Y P + +++F
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG-MVENVFVCSALVSMYARC 119
EM + ++P+ +T+ S+ S+L D+ + +++ GF +R G +E++ + +A+V MYA+
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAV 178
V ARAVF+ +P+ D +SWN +++ Y N + + +++ M EG + A++ TW +V
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
+ C + G + +++ ++ K G
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYL--------------------------------- 484
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
D+ T+L MY KC L + ++F +P+ + V WNT+I + HG+G++A++LF+ M
Sbjct: 485 -DVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEM 543
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L GVKP+ +TF +LS CSHS LVDEG F M D+ + P HY CMVD++ RAG+
Sbjct: 544 LDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQ 603
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L+ A KFI+ M L+P AS WGALL ACRV NV+L KIA++ LF++EP + G +V L N+
Sbjct: 604 LETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNM 663
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
SA W +IR + +G+ KTPG S ++V N+V F G++++ +++Y L L
Sbjct: 664 YASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTAL 723
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
K+K+ GY PD +VLQDV+ +EK L +HSE+LA+AF ++ +++IR+FKNLR+C
Sbjct: 724 QAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVC 783
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
GDCH+ K++S + IIVRDS RFHHFKNG CSC D W
Sbjct: 784 GDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 126/454 (27%), Positives = 229/454 (50%), Gaps = 55/454 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV+++ +LIH Y + K + AR +FD++ RD+ SW ++ S Y G ++ L +
Sbjct: 184 DVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS---- 239
Query: 64 WNGVKP-NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
NG++ ++VTV S+L AC+E D N G IH ++++HG+ +FV + L+ +YA +
Sbjct: 240 -NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++ + VFD M RD +SWN ++ AY N++ + ++LF M
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR------------------ 340
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR--IGD 240
L ++Q P+ +T+ S+ S L +R + V + LR + D
Sbjct: 341 ------------LSRIQ-----PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLED 383
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
++ A+V MYAK ++ +R VF+ +P DV++WNT+I A +G EA+ ++ M
Sbjct: 384 ITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEE 443
Query: 301 SG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
G + N T+ VL CS + + +G+++ + ++ L D + + D++ + GRL
Sbjct: 444 EGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLY-LDVFVVTSLADMYGKCGRL 502
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFK-NVELAKIAAKKLFD--IEPNNPGNYVSLF 416
++A ++P + W L+ AC F + E A + K++ D ++P++ +V+L
Sbjct: 503 EDALSLFYQIP-RVNSVPWNTLI-ACHGFHGHGEKAVMLFKEMLDEGVKPDHI-TFVTLL 559
Query: 417 NILVSAKLWSEASQ-IRILMKDRGIT---KTPGC 446
+ + L E ++ D GIT K GC
Sbjct: 560 SACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 7/152 (4%)
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+I ++ + LV +Y ++ L+R+ FD + +DV AWN MI GN E + F
Sbjct: 82 QIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFS 141
Query: 297 -NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
ML SG+ P+ TF VL C R V +G +I + + D + ++ ++SR
Sbjct: 142 LFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKI-HCLALKFGFMWDVYVAASLIHLYSR 197
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALL-GACR 386
+ A MP+ S W A++ G C+
Sbjct: 198 YKAVGNARILFDEMPVRDMGS-WNAMISGYCQ 228
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 441 bits (1133), Expect = e-123, Method: Compositional matrix adjust.
Identities = 227/570 (39%), Positives = 340/570 (59%), Gaps = 39/570 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ + N L++ Y KC +E AR+VF+ + RD V+WT+L S Y P L F++M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G PN T+SS++ A + + G +HGF V+ G NV V SAL+ +Y R +
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMD 213
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A+ VFD + R+ VSWN A+I G
Sbjct: 214 DAQLVFDALESRNDVSWN-----------------------------------ALIAGHA 238
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR--HRIGDL 241
TE++LE+ + M + GF+P+ + +S+ ACS L GK VH Y ++ ++
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ T L+ MYAK ++ +R +FD + K+DVV+WN+++ A A HG GKEA+ FE M R
Sbjct: 299 AGNT-LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G++PN ++F VL+ CSHS L+DEG + M +D +V P+A HY +VD+ RAG L+
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAGDLNR 416
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A +FI+ MP+EPTA+ W ALL ACR+ KN EL AA+ +F+++P++PG +V L+NI S
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
W++A+++R MK+ G+ K P CSW+++ N +H FV D + ++I +E+ K
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAK 536
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
+K GY PDT +V+ VDQ+E+ +L HSEK+A+AF +LN S+I + KN+R+CGDC
Sbjct: 537 IKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDC 596
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGN 571
H AIK S VVG IIVRD+ RFHHFK+ +
Sbjct: 597 HTAIKLASKVVGREIIVRDTNRFHHFKDAS 626
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 171/372 (45%), Gaps = 45/372 (12%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
+++L C+ K L G+ +H ++ ++ + + L++MYA+C S++EAR VF+ MP
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
RD V+W +++ Y + L F++M R
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLR----------------------------- 154
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAK 253
G+ PNE T+SS++ A + G ++H + ++ ++ +AL+ +Y +
Sbjct: 155 ------FGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR 208
Query: 254 CSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGV 313
++ ++ VFD + ++ V+WN +I +A ++AL LF+ MLR G +P+ ++ +
Sbjct: 209 YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASL 268
Query: 314 LSGCSHSRLVDEGLQIFNSMGR--DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
CS + +++G + M + + LV N ++D+++++G + +A K R+
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN---TLLDMYAKSGSIHDARKIFDRLAK 325
Query: 372 EPTASAWGALLGAC--RVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEAS 429
S W +LL A F + + I PN +++S+ + L E
Sbjct: 326 RDVVS-WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI-SFLSVLTACSHSGLLDEGW 383
Query: 430 QIRILMKDRGIT 441
LMK GI
Sbjct: 384 HYYELMKKDGIV 395
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 108/203 (53%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S+V + +AL+ Y + ++ A+ VFD L R+ VSW +L + + + L +F M
Sbjct: 194 SNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGM 253
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+G +P+ + +S+ ACS L GK +H + ++ G F + L+ MYA+ S+
Sbjct: 254 LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSI 313
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+AR +FD + RD VSWN +LTAY + ++ + F M R G++ ++ ++ +V+ C
Sbjct: 314 HDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTAC 373
Query: 183 MENGQTEESLEMLRKMQKMGFKP 205
+G +E M+K G P
Sbjct: 374 SHSGLLDEGWHYYELMKKDGIVP 396
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/572 (38%), Positives = 338/572 (59%), Gaps = 37/572 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW-NGV 67
N +++ Y + +E AR++FD++ +D SWT++ + YV P + L ++ M
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
+PN TVS + A + +K + GK IHG VR G+ + + S+L+ MY +C + EAR
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
+FD + +D VSW ++ YF + + +G +LFS + +G C
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL---------------VGSCE---- 315
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS-STTA 246
+PNE T + +L AC+ L + +GK+VH Y R S ++++
Sbjct: 316 ----------------RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
LV MY KC ++ +++V D PK D+V+W ++I A +G EAL F+ +L+SG KP+
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFI 366
VTF VLS C+H+ LV++GL+ F S+ H + ++HY+C+VD+ +R+GR ++ I
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Query: 367 QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWS 426
MP++P+ W ++LG C + N++LA+ AA++LF IEP NP YV++ NI +A W
Sbjct: 480 SEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWE 539
Query: 427 EASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAG 486
E ++R M++ G+TK PG SW ++ + H F+ D S+ ++I EFL EL +KMK G
Sbjct: 540 EEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Query: 487 YKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIK 546
Y P T VL DV+ E+K E+L HSEKLAVAF IL+ ++I+VFKNLR C DCH AIK
Sbjct: 600 YVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIK 659
Query: 547 YMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
++SN+ I VRDS RFH F+NG CSC D W
Sbjct: 660 FISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 187/356 (52%), Gaps = 14/356 (3%)
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
KP A T +++ CS+ + L GK +H G V + + + L+ MYA+C S+ +AR
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
VFD MP+RD SWN ++ Y E+ LF M+ + D +W A++ G ++ Q
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK----DSYSWTAMVTGYVKKDQ 197
Query: 188 TEESLEMLRKMQKM-GFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTT 245
EE+L + MQ++ +PN T+S + A + ++ +R GKE+H + +R + D +
Sbjct: 198 PEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWS 257
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
+L+ MY KC ++ +RN+FD + +KDVV+W +MI +E LF ++ S +P
Sbjct: 258 SLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERP 317
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
N TF GVL+ C+ + G Q+ M R +P + S +VD++++ G ++ A
Sbjct: 318 NEYTFAGVLNACADLTTEELGKQVHGYMTRVGF-DPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 366 IQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFNIL 419
+ P +P +W +L+G C + A K FD ++ ++V+ N+L
Sbjct: 377 VDGCP-KPDLVSWTSLIGGCAQNGQPD----EALKYFDLLLKSGTKPDHVTFVNVL 427
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 158/371 (42%), Gaps = 73/371 (19%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SD L ++L+ YGKC CI+ AR +FD +V +DVVSWTS+ Y R+G ++F
Sbjct: 249 LDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFS 308
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
E+ + +PN T + +L AC++L GK +HG+ R G F S+LV MY +C
Sbjct: 309 ELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCG 368
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+++ A+ V D P D VSW ++ N + ++ L F + + G K D T+ V+
Sbjct: 369 NIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLS 428
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
C G E+ LE SI E +HR+
Sbjct: 429 ACTHAGLVEKGLEFFY---------------------SITE-------------KHRLSH 454
Query: 241 LSS-TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
S T LV + A+ ++V MP
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMP------------------------------- 483
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPD-ANHYSCMVDVFSRAGR 358
+KP+ + VL GCS +D + + + +EP+ Y M ++++ AG+
Sbjct: 484 ---MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK---IEPENPVTYVTMANIYAAAGK 537
Query: 359 LDEAYKFIQRM 369
+E K +RM
Sbjct: 538 WEEEGKMRKRM 548
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/574 (37%), Positives = 344/574 (59%), Gaps = 39/574 (6%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+FL N LI+ Y K + A ++FD + R+V+SWT++ S Y C + ++ L + M
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ V+PN T SS+L +C+ + D+ + +H ++ G+ +VFV SAL+ ++A+ ++
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +VFD E V D WN++IGG +
Sbjct: 213 ALSVFD-----------------------------------EMVTGDAIVWNSIIGGFAQ 237
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST 244
N +++ +LE+ ++M++ GF + T++S+L AC+ L L +G + H + +++ DL
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD-QDLILN 296
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
ALV MY KC L + VF+ M ++DV+ W+TMI A +G +EAL LFE M SG K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
PN +T GVL CSH+ L+++G F SM + + ++P HY CM+D+ +AG+LD+A K
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
+ M EP A W LLGACRV +N+ LA+ AAKK+ ++P + G Y L NI +++
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 425 WSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKL 484
W +IR M+DRGI K PGCSW++V ++H F++GD S+ ++ + L++L ++
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 485 AGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNA 544
GY P+T++VLQD++ E+ +SL +HSEKLA+AFG++ L + IR+ KNLRICGDCH
Sbjct: 537 IGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVF 596
Query: 545 IKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
K S + +I++RD +R+HHF++G CSC D W
Sbjct: 597 CKLASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 3/206 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SDVF+ +ALI + K E A VFD++V D + W S+ + L +F
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M G T++S+L AC+ L L G H V++ +++ + +ALV MY +C
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKCG 307
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S+++A VF+ M RD ++W+ +++ N ++ L LF RM G K + T V+
Sbjct: 308 SLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLF 367
Query: 181 GCMENGQTEESLEMLRKMQKM-GFKP 205
C G E+ R M+K+ G P
Sbjct: 368 ACSHAGLLEDGWYYFRSMKKLYGIDP 393
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
D+ L+NAL+ Y KC +E A RVF+ + RDV++W+++ S G ++ L +F M
Sbjct: 291 QDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERM 350
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSG-------KAIHGFAVRHGMVENVFVCSALVSM 115
+G KPN +T+ +L ACS L G K ++G V + C ++ +
Sbjct: 351 KSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI----DPVREHYGC--MIDL 404
Query: 116 YARCLSVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
+ + +A + + M DAV+W +L A + LA ++ + + A
Sbjct: 405 LGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV--LAEYAAKKVIALDPEDAG 462
Query: 175 WNAVIGGCMENGQTEESLEMLR-KMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
++ N Q +S+E +R +M+ G K P CS +E + K++H +
Sbjct: 463 TYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKE--------PGCSWIE---VNKQIHAF 510
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 434 bits (1115), Expect = e-121, Method: Compositional matrix adjust.
Identities = 221/579 (38%), Positives = 344/579 (59%), Gaps = 39/579 (6%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFD--DLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+DVF+ N LI Y KC+ + AR VF+ L R +VSWT++ S Y G P + L IF
Sbjct: 152 ADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFS 211
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M VKP+ V + S+L A + L+DL G++IH V+ G+ + +L +MYA+C
Sbjct: 212 QMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCG 271
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
V A+ +FD M S N +L WNA+I
Sbjct: 272 QVATAKILFDKMK-----SPNLIL------------------------------WNAMIS 296
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY-GLRHRIG 239
G +NG E+++M +M +P+ I+I+S + AC+ + SL + ++ Y G
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ ++AL+ M+AKC + +R VFD +DVV W+ MI+ +HG +EA+ L+ M
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
R GV PN VTF G+L C+HS +V EG FN M DH + P HY+C++D+ RAG L
Sbjct: 417 RGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHL 475
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
D+AY+ I+ MP++P + WGALL AC+ ++VEL + AA++LF I+P+N G+YV L N+
Sbjct: 476 DQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLY 535
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
+A+LW +++R+ MK++G+ K GCSW++V R+ F VGD+S+ ++I ++ +
Sbjct: 536 AAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIE 595
Query: 480 QKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
++K G+ + D L D++ EE E+LC+HSE++A+A+G+++ + +R+ KNLR C
Sbjct: 596 SRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACV 655
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+CH A K +S +V I+VRD+ RFHHFK+G CSC D W
Sbjct: 656 NCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 40/380 (10%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
FL LIHA I AR+VFDDL + W ++ Y + L ++ M
Sbjct: 54 FLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLA 113
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
V P++ T +L ACS L L G+ +H R G +VFV + L+++YA+C + A
Sbjct: 114 RVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA 173
Query: 126 RAVFD--LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
R VF+ +P R VSW +++AY N E + L +FS+M
Sbjct: 174 RTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM-------------------- 213
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
+KM KP+ + + S+L A + L+ L+ G+ +H ++ + +
Sbjct: 214 ---------------RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPD 258
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L MYAKC + ++ +FD M +++ WN MI A +G +EA+ +F M+
Sbjct: 259 LLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V+P++++ T +S C+ +++ ++ +GR + D S ++D+F++ G ++ A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD-DVFISSALIDMFAKCGSVEGA 377
Query: 363 YKFIQRMPLEPTASAWGALL 382
R L+ W A++
Sbjct: 378 RLVFDRT-LDRDVVVWSAMI 396
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 126/296 (42%), Gaps = 42/296 (14%)
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
K IH + G+ + F+ + L+ + + AR VFD +P WN ++ Y N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
++ L ++S M Q P+ T
Sbjct: 98 NHFQDALLMYSNM-----------------------------------QLARVSPDSFTF 122
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFD--MM 267
+L ACS L L+MG+ VH R D+ L+ +YAKC L +R VF+ +
Sbjct: 123 PHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPL 182
Query: 268 PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL 327
P++ +V+W ++ A A +G EAL +F M + VKP+ V VL+ + + + +G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGR 242
Query: 328 QIFNSMGRDHL-VEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
I S+ + L +EPD + ++++ G++ A +M P W A++
Sbjct: 243 SIHASVVKMGLEIEPDL--LISLNTMYAKCGQVATAKILFDKMK-SPNLILWNAMI 295
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/557 (40%), Positives = 343/557 (61%), Gaps = 14/557 (2%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
A ++FD++ D S+ + SCYV + + F M + +A + ++++ +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYAR 167
Query: 84 LKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNG 142
++ + + + M+E N +A++S Y C +++A F + P R V+W
Sbjct: 168 RGEMEKARELF-----YSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTA 222
Query: 143 VLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMG 202
++T Y K+ E A+F M+ V + TWNA+I G +EN + E+ L++ R M + G
Sbjct: 223 MITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEG 279
Query: 203 FKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSR 261
+PN +SS L CS L +L++G+++H + + D+++ T+L+ MY KC +L +
Sbjct: 280 IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAW 339
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSR 321
+F++M KKDVVAWN MI A HGN +AL LF M+ + ++P+ +TF VL C+H+
Sbjct: 340 KLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAG 399
Query: 322 LVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
LV+ G+ F SM RD+ VEP +HY+CMVD+ RAG+L+EA K I+ MP P A+ +G L
Sbjct: 400 LVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTL 459
Query: 382 LGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGIT 441
LGACRV KNVELA+ AA+KL + N YV L NI S W + +++R MK+ +
Sbjct: 460 LGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVV 519
Query: 442 KTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQE 501
K PG SW+++ N+VH F DR + D I++ L EL +KMKLAGYKP+ ++ L +V++E
Sbjct: 520 KVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEE 579
Query: 502 EKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDS 561
+K + L HSEKLAVAFG + L S I+VFKNLRICGDCH AIK++S + IIVRD+
Sbjct: 580 QKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDT 639
Query: 562 LRFHHFKNGNCSCQDLW 578
RFHHFK+G+CSC D W
Sbjct: 640 TRFHHFKDGSCSCGDYW 656
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 157/338 (46%), Gaps = 21/338 (6%)
Query: 74 VSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM 132
++ I+ C D++ + HG ++ + N S L+ + + EA +FD +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWN----SLLIGISKDPSRMMEAHQLFDEI 119
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P D S+N +L+ Y N +EK + F RM + D A+WN +I G G+ E++
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKAR 175
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
E+ M + NE++ ++++ +E + K H + + G + + TA++ Y
Sbjct: 176 ELFYSM----MEKNEVSWNAMISG--YIECGDLEKASHFFKVAPVRG-VVAWTAMITGYM 228
Query: 253 KCSDLNLSRNVF-DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
K + L+ +F DM K++V WN MI + ++ L LF ML G++PNS +
Sbjct: 229 KAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
L GCS + G QI + + L D + ++ ++ + G L +A+K + M
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAWKLFEVMK- 346
Query: 372 EPTASAWGALLGACRVFKNVELAKIAAKKLFD--IEPN 407
+ AW A++ N + A +++ D I P+
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD 384
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 120/287 (41%), Gaps = 71/287 (24%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWT---------------------------- 40
NA+I Y +C +E A F R VV+WT
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 41 ----SLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGF 96
++ S YV P GL +F M G++PN+ +SS L CSEL L G+ IH
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 97 AVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKG 156
+ + +V ++L+SMY +C + +A +F++M +D V+WN +++ Y + +K
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 157 LALFSRMSREGVKADKATWNAVIGGCM--------------------------------- 183
L LF M ++ D T+ AV+ C
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 429
Query: 184 ---ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGK 227
G+ EE+L+++R M F+P+ ++L AC + +++ + +
Sbjct: 430 LLGRAGKLEEALKLIRSMP---FRPHAAVFGTLLGACRVHKNVELAE 473
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +DV +LI Y KC + A ++F+ + +DVV+W ++ S Y G + L +F
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE---NVFVCSALVSMYA 117
EM N ++P+ +T ++L AC+ +N G A VR VE + + C +V +
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC--MVDLLG 432
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVL 144
R ++EA + MP R + G L
Sbjct: 433 RAGKLEEALKLIRSMPFRPHAAVFGTL 459
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 230/581 (39%), Positives = 329/581 (56%), Gaps = 38/581 (6%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
D FL+ LI Y ++ AR+VFD R + W +L G + L ++ +M
Sbjct: 110 QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKM 169
Query: 63 GWNGVKPNAVTVSSILPAC--SE--LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
GV+ + T + +L AC SE + L GK IH R G +V++ + LV MYAR
Sbjct: 170 NRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYAR 229
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
V A VF MP R+ VSW+ ++ Y N + + L F M RE
Sbjct: 230 FGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE------------ 277
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
T++S PN +T+ S+L AC+ L +L GK +H Y LR +
Sbjct: 278 ---------TKDS------------SPNSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 239 GD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
L +ALV MY +C L + + VFD M +DVV+WN++I + +HG GK+A+ +FE
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
ML +G P VTF VL CSH LV+EG ++F +M RDH ++P HY+CMVD+ RA
Sbjct: 377 MLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFN 417
RLDEA K +Q M EP WG+LLG+CR+ NVELA+ A+++LF +EP N GNYV L +
Sbjct: 437 RLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLAD 496
Query: 418 ILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDE 477
I A++W E +++ L++ RG+ K PG W++V ++++FV D N ++I+ FL +
Sbjct: 497 IYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVK 556
Query: 478 LGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRI 537
L + MK GY P T VL +++ EEK + HSEKLA+AFG++N + IR+ KNLR+
Sbjct: 557 LAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRL 616
Query: 538 CGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
C DCH K++S + I+VRD RFH FKNG CSC D W
Sbjct: 617 CEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+S V++ L+ Y + C++ A VF + R+VVSW+++ +CY G + L F E
Sbjct: 214 SSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFRE 273
Query: 62 M--GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M PN+VT+ S+L AC+ L L GK IHG+ +R G+ + V SALV+MY RC
Sbjct: 274 MMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRC 333
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
++ + VFD M RD VSWN ++++Y + +K + +F M G T+ +V+
Sbjct: 334 GKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVL 393
Query: 180 GGCMENGQTEESLEMLRKM-QKMGFKPN 206
G C G EE + M + G KP
Sbjct: 394 GACSHEGLVEEGKRLFETMWRDHGIKPQ 421
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 163/377 (43%), Gaps = 38/377 (10%)
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ T ++ C L+ +H + +G ++ F+ + L+ MY+ SV AR V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
FD R WN + A E+ L L+ +M+R GV++D+ T+ V+ C+
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV----- 189
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTAL 247
+E T++ ++ GKE+H + R + T L
Sbjct: 190 ----------------ASECTVNHLMK----------GKEIHAHLTRRGYSSHVYIMTTL 223
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS--GVKP 305
V MYA+ ++ + VF MP ++VV+W+ MI A +G EAL F M+R P
Sbjct: 224 VDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSP 283
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
NSVT VL C+ +++G I + R L + S +V ++ R G+L+ +
Sbjct: 284 NSVTMVSVLQACASLAALEQGKLIHGYILRRGL-DSILPVISALVTMYGRCGKLEVGQRV 342
Query: 366 IQRMPLEPTASAWGALLGACRVFKNVELA-KIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
RM S W +L+ + V + A +I + L + P +VS+ L
Sbjct: 343 FDRMHDRDVVS-WNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGL 401
Query: 425 WSEASQI-RILMKDRGI 440
E ++ + +D GI
Sbjct: 402 VEEGKRLFETMWRDHGI 418
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 228/579 (39%), Positives = 339/579 (58%), Gaps = 36/579 (6%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ DV L N LI+AY KC +E AR+VFD ++ R +VSW ++ Y + + L IF
Sbjct: 92 LEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM G K + T+SS+L AC D K +H +V+ + N++V +AL+ +YA+C
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 211
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+K+A VF+ M + +V TW++++
Sbjct: 212 MIKDAVQVFESMQDKSSV-----------------------------------TWSSMVA 236
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
G ++N EE+L + R+ Q+M + N+ T+SS++ ACS L +L GK++H + G
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS 296
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
++ ++ V MYAKC L S +F + +K++ WNT+I A H KE ++LFE M
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQ 356
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ G+ PN VTF+ +LS C H+ LV+EG + F M + + P+ HYSCMVD+ RAG L
Sbjct: 357 QDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLL 416
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EAY+ I+ +P +PTAS WG+LL +CRV+KN+ELA++AA+KLF++EP N GN+V L NI
Sbjct: 417 SEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIY 476
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
+ K W E ++ R L++D + K G SW+ + ++VHTF VG+ + +I LD L
Sbjct: 477 AANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLV 536
Query: 480 QKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
K + GYKP ++ L DV+ +K E L HSEKLA+ FG++ L S +R+ KNLRIC
Sbjct: 537 IKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICV 596
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH +K S IIVRD RFHHF +G+CSC D W
Sbjct: 597 DCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 159/370 (42%), Gaps = 49/370 (13%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
V IL C+ + KA HG +R + +V + + L++ Y++C V+ AR VFD M
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 134 HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLE 193
R VSWN ++ Y N+ + L +F M EG K
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF----------------------- 160
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYA 252
+E TISS+L AC + K++HC ++ I +L TAL+ +YA
Sbjct: 161 ------------SEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYA 208
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
KC + + VF+ M K V W++M+ + N +EALLL+ R ++ N T +
Sbjct: 209 KCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 313 VLSGCSHSRLVDEGLQIF-----NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ 367
V+ CS+ + EG Q+ + G + V A VD++++ G L E+Y
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSA------VDMYAKCGSLRESYIIFS 322
Query: 368 RMPLEPTASAWGALL-GACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWS 426
+ E W ++ G + + E+ + K D N + SL ++ L
Sbjct: 323 EVQ-EKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVE 381
Query: 427 EASQIRILMK 436
E + LM+
Sbjct: 382 EGRRFFKLMR 391
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 429 bits (1103), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/590 (38%), Positives = 339/590 (57%), Gaps = 48/590 (8%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV NA++ Y + E A R+F+ + + DVV+W++ S Y GL + L +
Sbjct: 294 DVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRH-------GMVENVFVCSAL 112
+M +G+KPN VT+ S+L C+ + L GK IH +A+++ G + V + L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 113 VSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ MYA+C V ARA+FD + ++ D
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKER---------------------------------DV 440
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKM--QKMGFKPNEITISSILPACSILESLRMGKEVH 230
TW +IGG ++G ++LE+L +M + +PN TIS L AC+ L +LR+GK++H
Sbjct: 441 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH 500
Query: 231 CYGLRHRIG--DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG 288
Y LR++ L + L+ MYAKC ++ +R VFD M K+ V W +++ MHG G
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
+EAL +F+ M R G K + VT VL CSHS ++D+G++ FN M V P HY+C
Sbjct: 561 EEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYAC 620
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNN 408
+VD+ RAGRL+ A + I+ MP+EP W A L CR+ VEL + AA+K+ ++ N+
Sbjct: 621 LVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680
Query: 409 PGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGS 468
G+Y L N+ +A W + ++IR LM+ +G+ K PGCSW++ TF VGD+++ +
Sbjct: 681 DGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHA 740
Query: 469 DKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSS 528
+IY+ L + Q++K GY P+T + L DVD EEK + L HSEKLA+A+GIL ++
Sbjct: 741 KEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAA 800
Query: 529 IRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
IR+ KNLR+CGDCH A YMS ++ II+RDS RFHHFKNG+CSC+ W
Sbjct: 801 IRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 212/393 (53%), Gaps = 14/393 (3%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S+VF+ NAL+ Y +C+ + AR+VFD++ DVVSW S+ Y G P+ L +F M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 63 GWN-GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
G +P+ +T+ ++LP C+ L + GK +H FAV M++N+FV + LV MYA+C
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGM 279
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ EA VF M +D VSWN ++ Y +E + LF +M E +K D TW+A I G
Sbjct: 280 MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISG 339
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--- 238
+ G E+L + R+M G KPNE+T+ S+L C+ + +L GKE+HCY +++ I
Sbjct: 340 YAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLR 399
Query: 239 ----GDLSST-TALVYMYAKCSDLNLSRNVFD-MMPK-KDVVAWNTMIIANAMHGNGKEA 291
GD + L+ MYAKC ++ +R +FD + PK +DVV W MI + HG+ +A
Sbjct: 400 KNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKA 459
Query: 292 LLLFENMLRSG--VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
L L M +PN+ T + L C+ + G QI R+ +C+
Sbjct: 460 LELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCL 519
Query: 350 VDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+D++++ G + +A M + W +L+
Sbjct: 520 IDMYAKCGSISDARLVFDNM-MAKNEVTWTSLM 551
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 187/432 (43%), Gaps = 97/432 (22%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRD--VVSWTSLSSCYVNCGLPRQGLAIF---HE 61
L++ LI Y C+ A + D V W SL Y + G + L +F H
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
+ W P+ T + AC E+ + G++ H ++ G + NVFV +ALV+MY+RC S
Sbjct: 121 LSWT---PDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRS 177
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ +AR VFD M D VSWN ++ +Y + + L +FSRM+ E
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE--------------- 222
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGD 240
G +P+ IT+ ++LP C+ L + +GK++HC+ + I +
Sbjct: 223 -------------------FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQN 263
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE---- 296
+ LV MYAKC ++ + VF M KDVV+WN M+ + G ++A+ LFE
Sbjct: 264 MFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQE 323
Query: 297 -------------------------------NMLRSGVKPNSVTFTGVLSGCSHSRLVDE 325
ML SG+KPN VT VLSGC+ +
Sbjct: 324 EKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMH 383
Query: 326 GLQIF------------NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM-PLE 372
G +I N G +++V + ++D++++ ++D A + P E
Sbjct: 384 GKEIHCYAIKYPIDLRKNGHGDENMV------INQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 373 PTASAWGALLGA 384
W ++G
Sbjct: 438 RDVVTWTVMIGG 449
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 230/614 (37%), Positives = 361/614 (58%), Gaps = 40/614 (6%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +V +SN+L++ Y KC A+ VFD +V RD+ SW ++ + ++ G +A F
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 61 EMG------WNG--------------------------VKPNAVTVSSILPACSELKDLN 88
+M WN + P+ T++S+L AC+ L+ L
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 89 SGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRD--AVSWNGVLTA 146
GK IH V G + V +AL+SMY+RC V+ AR + + +D + +L
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 147 YFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPN 206
Y + + +F + V A W A+I G ++G E++ + R M G +PN
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVA----WTAMIVGYEQHGSYGEAINLFRSMVGGGQRPN 412
Query: 207 EITISSILPACSILESLRMGKEVHCYGLRH-RIGDLSSTTALVYMYAKCSDLNLSRNVFD 265
T++++L S L SL GK++H ++ I +S + AL+ MYAK ++ + FD
Sbjct: 413 SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD 472
Query: 266 MMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVD 324
++ ++D V+W +MIIA A HG+ +EAL LFE ML G++P+ +T+ GV S C+H+ LV+
Sbjct: 473 LIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVN 532
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+G Q F+ M + P +HY+CMVD+F RAG L EA +FI++MP+EP WG+LL A
Sbjct: 533 QGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Query: 385 CRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTP 444
CRV KN++L K+AA++L +EP N G Y +L N+ + W EA++IR MKD + K
Sbjct: 593 CRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQ 652
Query: 445 GCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKA 504
G SW++V ++VH F V D ++ ++IY + ++ ++K GY PDT VL D+++E K
Sbjct: 653 GFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKE 712
Query: 505 ESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRF 564
+ L +HSEKLA+AFG+++ ++++R+ KNLR+C DCH AIK++S +VG IIVRD+ RF
Sbjct: 713 QILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRF 772
Query: 565 HHFKNGNCSCQDLW 578
HHFK+G CSC+D W
Sbjct: 773 HHFKDGFCSCRDYW 786
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/472 (27%), Positives = 228/472 (48%), Gaps = 49/472 (10%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
F N ++ AY K ++ FD L RD VSWT++ Y N G + + + +M
Sbjct: 81 FSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKE 140
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
G++P T++++L + + + + +GK +H F V+ G+ NV V ++L++MYA+C A
Sbjct: 141 GIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+ VFD M RD SWN ++ + + + +A F +M+ D TWN++I G +
Sbjct: 201 KFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAER----DIVTWNSMISGFNQR 256
Query: 186 GQTEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCY------------ 232
G +L++ KM + P+ T++S+L AC+ LE L +GK++H +
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 233 -----GLRHRIGDLSST-----------------TALVYMYAKCSDLNLSRNVFDMMPKK 270
+ R G + + TAL+ Y K D+N ++N+F + +
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
DVVAW MI+ HG+ EA+ LF +M+ G +PNS T +LS S + G QI
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKN 390
S + + + + ++ ++++AG + A + + E +W +++ A +
Sbjct: 437 GSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 391 VELAKIAAKKLFD---IEPNNPGN--YVSLFNILVSAKLWSEASQIRILMKD 437
E A +LF+ +E P + YV +F+ A L ++ Q +MKD
Sbjct: 496 AE----EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 151/286 (52%), Gaps = 23/286 (8%)
Query: 69 PNAVTVSSILPACSEL--KDLN------SGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
P +++S++L C+ L K +N + + +H ++ G++ +V++ + L+++Y++
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
AR +FD MP R A SWN VL+AY + + F ++ + D +W +I
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMIV 119
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY----GLRH 236
G GQ +++ ++ M K G +P + T++++L + + + GK+VH + GLR
Sbjct: 120 GYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLR- 178
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
G++S + +L+ MYAKC D +++ VFD M +D+ +WN MI + G A+ FE
Sbjct: 179 --GNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPD 342
M + VT+ ++SG + L IF+ M RD L+ PD
Sbjct: 237 QMAERDI----VTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/627 (38%), Positives = 344/627 (54%), Gaps = 61/627 (9%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM------ 62
N L+ Y K I+ AR+VFD + R+VVSWT+L YV+ G ++F +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKV 142
Query: 63 GW---------NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE--------- 104
W +G +A + ++P + ++ IHG + G V+
Sbjct: 143 SWTVMLIGFLQDGRIDDACKLYEMIP---DKDNIARTSMIHGLC-KEGRVDEAREIFDEM 198
Query: 105 ---NVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFS 161
+V + +V+ Y + V +AR +FD+MP + VSW +L Y N E LF
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 162 RMSREGVKA---------------------------DKATWNAVIGGCMENGQTEESLEM 194
M + V A + A+W VI NG E+L++
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAK 253
MQK G +P T+ SIL C+ L SL GK+VH +R + D+ + L+ MY K
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 254 CSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG-VKPNSVTFTG 312
C +L S+ +FD P KD++ WN++I A HG G+EAL +F M SG KPN VTF
Sbjct: 379 CGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVA 438
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
LS CS++ +V+EGL+I+ SM V+P HY+CMVD+ RAGR +EA + I M +E
Sbjct: 439 TLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVE 498
Query: 373 PTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIR 432
P A+ WG+LLGACR +++A+ AKKL +IEP N G Y+ L N+ S W++ +++R
Sbjct: 499 PDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELR 558
Query: 433 ILMKDRGITKTPGCSWLQVGNRVHTFVVGD-RSNTGSDKIYEFLDELGQKMKLAGYKPDT 491
LMK R + K+PGCSW +V N+VH F G S+ + I + LDEL ++ AGY PD
Sbjct: 559 KLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDC 618
Query: 492 DYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNV 551
Y L DVD+EEK SL HSE+LAVA+ +L L+ IRV KNLR+C DCH AIK +S V
Sbjct: 619 SYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKV 678
Query: 552 VGVTIIVRDSLRFHHFKNGNCSCQDLW 578
II+RD+ RFHHF+NG CSC+D W
Sbjct: 679 KEREIILRDANRFHHFRNGECSCKDYW 705
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 106/203 (52%), Gaps = 2/203 (0%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V NA+I G+ I ARRVFD + R+ SW ++ + G + L +F M
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GV+P T+ SIL C+ L L+ GK +H VR +V+V S L++MY +C + +
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAVIGGCM 183
++ +FD P +D + WN +++ Y ++ E+ L +F M G K ++ T+ A + C
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 184 ENGQTEESLEMLRKMQKM-GFKP 205
G EE L++ M+ + G KP
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKP 467
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 176/410 (42%), Gaps = 76/410 (18%)
Query: 8 SNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGV 67
+N I + I AR++FD + + SW S+ + Y +PR +F EM
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM----- 74
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
P+ N+ + LVS Y + + EAR
Sbjct: 75 -PD---------------------------------RNIISWNGLVSGYMKNGEIDEARK 100
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
VFDLMP R+ VSW ++ Y N + + +LF +M + +K +W ++ G +++G+
Sbjct: 101 VFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGR 156
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS----- 242
+++ K+ +M + I +S++ + KE R ++S
Sbjct: 157 IDDAC----KLYEMIPDKDNIARTSMIHG--------LCKEGRVDEAREIFDEMSERSVI 204
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+ T +V Y + + ++ +R +FD+MP+K V+W +M++ +G ++A LFE M
Sbjct: 205 TWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVM---P 261
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
VKP + ++SG + + ++F+SM E + + ++ + R G EA
Sbjct: 262 VKP-VIACNAMISGLGQKGEIAKARRVFDSMK-----ERNDASWQTVIKIHERNGFELEA 315
Query: 363 ---YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKL----FDIE 405
+ +Q+ + PT ++L C ++ K +L FD++
Sbjct: 316 LDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 157/334 (47%), Gaps = 30/334 (8%)
Query: 113 VSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
++ +R + EAR +FD + SWN ++ YF N LF M +
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI---- 79
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
+WN ++ G M+NG+ +E+ RK+ + + N ++ ++++ + GK
Sbjct: 80 ISWNGLVSGYMKNGEIDEA----RKVFDLMPERNVVSWTALVKG-----YVHNGKVDVAE 130
Query: 233 GLRHRIGDLSSTTALVYMYAKCSD--LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
L ++ + + + V + D ++ + +++M+P KD +A +MI G E
Sbjct: 131 SLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDE 190
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
A +F+ M V +T+T +++G + VD+ +IF+ M E ++ M+
Sbjct: 191 AREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMP-----EKTEVSWTSML 241
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD-IEPNNP 409
+ + GR+++A + + MP++P + + G + + E+AK A+++FD ++ N
Sbjct: 242 MGYVQNGRIEDAEELFEVMPVKPVIACNAMISG---LGQKGEIAK--ARRVFDSMKERND 296
Query: 410 GNYVSLFNILVSAKLWSEASQIRILMKDRGITKT 443
++ ++ I EA + ILM+ +G+ T
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPT 330
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV++++ L+ Y KC + ++ +FD +D++ W S+ S Y + GL + L +F EM
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 64 WNG-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA----- 117
+G KPN VT + L ACS +G G + M E+VF + + YA
Sbjct: 425 LSGSTKPNEVTFVATLSACS-----YAGMVEEGLKIYESM-ESVFGVKPITAHYACMVDM 478
Query: 118 --RCLSVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYE 154
R EA + D M DA W +L A T+ + +
Sbjct: 479 LGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLD 518
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 424 bits (1090), Expect = e-119, Method: Compositional matrix adjust.
Identities = 217/575 (37%), Positives = 345/575 (60%), Gaps = 6/575 (1%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+ +AL+ Y KC I+ A+R+FD+ ++ +++S YV GL R+ L +F+ M +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
GV+P+ +++ S + +CS+L+++ GK+ HG+ +R+G +C+AL+ MY +C A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+FD M ++ V+WN ++ Y N E + F M + + +WN +I G ++
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQG 447
Query: 186 GQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSS 243
EE++E+ MQ + G + +T+ SI AC L +L + K ++ Y ++ I D+
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
T LV M+++C D + ++F+ + +DV AW I A AM GN + A+ LF++M+ G+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KP+ V F G L+ CSH LV +G +IF SM + H V P+ HY CMVD+ RAG L+EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
+ I+ MP+EP W +LL ACRV NVE+A AA+K+ + P G+YV L N+ SA
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
W++ +++R+ MK++G+ K PG S +Q+ + H F GD S+ I LDE+ Q+
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747
Query: 484 LAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHN 543
G+ PD VL DVD++EK L HSEKLA+A+G+++ N ++IR+ KNLR+C DCH+
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807
Query: 544 AIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
K+ S V II+RD+ RFH+ + G CSC D W
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 172/370 (46%), Gaps = 44/370 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+F+ N+L+H Y +C ++ AR+VFD++ R+VVSWTS+ Y + + +F M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 64 WN-GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ V PN+VT+ ++ AC++L+DL +G+ ++ F G+ N + SALV MY +C ++
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A+ +FD + N + + Y + L +F+ M GV
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV-------------- 333
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+P+ I++ S + +CS L ++ GK H Y LR+
Sbjct: 334 ---------------------RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 243 ST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ AL+ MY KC + + +FD M K VV WN+++ +G A FE M
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM--- 429
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
+ N V++ ++SG L +E +++F SM V D + G LD
Sbjct: 430 -PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 362 A---YKFIQR 368
A Y +I++
Sbjct: 489 AKWIYYYIEK 498
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 195/419 (46%), Gaps = 46/419 (10%)
Query: 39 WTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAV 98
+ SL Y + GL + + +F M +G+ P+ T L AC++ + +G IHG V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 99 RHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLA 158
+ G +++FV ++LV YA C + AR VFD M R+ VSW ++ Y + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 159 LFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACS 218
LF RM R+ EE PN +T+ ++ AC+
Sbjct: 222 LFFRMVRD----------------------EE------------VTPNSVTMVCVISACA 247
Query: 219 ILESLRMGKEVHCYGLRH---RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
LE L G++V+ + +R+ + DL +ALV MY KC+ +++++ +FD ++
Sbjct: 248 KLEDLETGEKVYAF-IRNSGIEVNDL-MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
N M G +EAL +F M+ SGV+P+ ++ +S CS R + G + R
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 336 DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAK 395
+ D N + ++D++ + R D A++ RM T W +++ +N E+
Sbjct: 366 NGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAG--YVENGEVD- 420
Query: 396 IAAKKLFDIEPN-NPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGN 453
AA + F+ P N ++ ++ + LV L+ EA ++ M+ + G + + + +
Sbjct: 421 -AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV L L+ + +C E A +F+ L RDV +WT+ G + + +F +M
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARCLSV 122
G+KP+ V L ACS + GK I + HG+ +V + R +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTA 146
+EA + + MP + V WN +L A
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAA 648
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 422 bits (1084), Expect = e-118, Method: Compositional matrix adjust.
Identities = 219/577 (37%), Positives = 332/577 (57%), Gaps = 45/577 (7%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++ I Y KC I+ +F + D+V++ ++ Y + G L++F E+ +
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLS 316
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
G + + T+ S++P L + AIHG+ ++ + + V +AL ++Y++ ++ A
Sbjct: 317 GARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R +FD P EK L +WNA+I G +N
Sbjct: 374 RKLFDESP--------------------EKSLP---------------SWNAMISGYTQN 398
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST- 244
G TE+++ + R+MQK F PN +TI+ IL AC+ L +L +GK VH R D S+
Sbjct: 399 GLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLV---RSTDFESSI 455
Query: 245 ---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
TAL+ MYAKC + +R +FD+M KK+ V WNTMI +HG G+EAL +F ML S
Sbjct: 456 YVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNS 515
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G+ P VTF VL CSH+ LV EG +IFNSM + EP HY+CMVD+ RAG L
Sbjct: 516 GITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQR 575
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A +FI+ M +EP +S W LLGACR+ K+ LA+ ++KLF+++P+N G +V L NI +
Sbjct: 576 ALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSA 635
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
+ + +A+ +R K R + K PG + +++G H F GD+S+ +IYE L++L K
Sbjct: 636 DRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGK 695
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
M+ AGY+P+T+ L DV++EE+ + HSE+LA+AFG++ + IR+ KNLR+C DC
Sbjct: 696 MREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDC 755
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
H K +S + I+VRD+ RFHHFK+G CSC D W
Sbjct: 756 HTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 164/387 (42%), Gaps = 53/387 (13%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF-HEM 62
D+ L L I AR +F + DV + L + P L++F H
Sbjct: 51 DISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLR 110
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+KPN+ T + + A S +D +G+ IHG AV G + + S +V MY + V
Sbjct: 111 KSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRV 170
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++AR VFD MP +D + WN +++ Y N+ Y + + +F + E
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT------------- 217
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH-------CYGLR 235
+ + T+ ILPA + L+ LR+G ++H CY
Sbjct: 218 ---------------------RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+ + T + +Y+KC + + +F K D+VA+N MI +G + +L LF
Sbjct: 257 YVL------TGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
+ ++ SG + S T ++ H L+ I + + + A+ + + V+S+
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLS-HASVSTALTTVYSK 366
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALL 382
++ A K P E + +W A++
Sbjct: 367 LNEIESARKLFDESP-EKSLPSWNAMI 392
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 326/578 (56%), Gaps = 43/578 (7%)
Query: 10 ALIHAYGKCKC---IEGARRVFDDLVGRDVVSWTSLSSCYV-NCGLPRQGLAIFHEMGWN 65
+L+ Y KC ++ R+VFD + V+SWT+L + Y+ NC L + + +F EM
Sbjct: 307 SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQ 366
Query: 66 G-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G V+PN T SS AC L D GK + G A + G+ N V ++++SM+ + +++
Sbjct: 367 GHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMED 426
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A+ F+ + ++ VS+N L N +E+ L S ++ + T+ +++ G
Sbjct: 427 AQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST 244
G + ++ ++ K+G N+ P C+
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQ-------PVCN-------------------------- 513
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
AL+ MY+KC ++ + VF+ M ++V++W +MI A HG L F M+ GVK
Sbjct: 514 -ALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
PN VT+ +LS CSH LV EG + FNSM DH ++P HY+CMVD+ RAG L +A++
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
FI MP + W LGACRV N EL K+AA+K+ +++PN P Y+ L NI A
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGK 692
Query: 425 WSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKL 484
W E++++R MK+R + K GCSW++VG+++H F VGD ++ + +IY+ LD L ++K
Sbjct: 693 WEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKR 752
Query: 485 AGYKPDTDYVLQDVDQEEKAES----LCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
GY PDTD VL +++E L HSEK+AVAFG+++ + +RVFKNLR+CGD
Sbjct: 753 CGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGD 812
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CHNA+KY+S V G I++RD RFHHFK+G CSC D W
Sbjct: 813 CHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 182/375 (48%), Gaps = 47/375 (12%)
Query: 3 SDVFLSNALIHAYGKCK-CIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
SDV + +LI + K + E A +VFD + +VV+WT + + + G PR+ + F +
Sbjct: 200 SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLD 259
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL- 120
M +G + + T+SS+ AC+EL++L+ GK +H +A+R G+V++V CS LV MYA+C
Sbjct: 260 MVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV-ECS-LVDMYAKCSA 317
Query: 121 --SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEY-EKGLALFSRMSREGVKADKATWNA 177
SV + R VFD M +SW ++T Y N + + LFS M +G
Sbjct: 318 DGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG---------- 367
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR 237
+PN T SS AC L R+GK+V +
Sbjct: 368 ------------------------HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRG 403
Query: 238 IGDLSSTT-ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+ SS +++ M+ K + ++ F+ + +K++V++NT + + N ++A L
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLS 463
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLV--EPDANHYSCMVDVFS 354
+ + ++ TF +LSG ++ + +G QI + + + L +P N ++ ++S
Sbjct: 464 EITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCN---ALISMYS 520
Query: 355 RAGRLDEAYKFIQRM 369
+ G +D A + M
Sbjct: 521 KCGSIDTASRVFNFM 535
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 180/393 (45%), Gaps = 47/393 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLV---GRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
D L N+LI Y K A VF+ + RDVVSW+++ +CY N G + +F
Sbjct: 96 DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFV 155
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARC 119
E G+ PN ++++ ACS + G+ GF ++ G E +V V +L+ M+ +
Sbjct: 156 EFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKG 215
Query: 120 L-SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
S + A VFD M + V+W ++T
Sbjct: 216 ENSFENAYKVFDKMSELNVVTWTLMITR-------------------------------- 243
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
CM+ G E++ M GF+ ++ T+SS+ AC+ LE+L +GK++H + +R +
Sbjct: 244 ---CMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL 300
Query: 239 GDLSSTTALVYMYAKCS---DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGN-GKEALLL 294
D +LV MYAKCS ++ R VFD M V++W +I + N EA+ L
Sbjct: 301 VD-DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINL 359
Query: 295 FENMLRSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
F M+ G V+PN TF+ C + G Q+ + L +++ + ++ +F
Sbjct: 360 FSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS-NSSVANSVISMF 418
Query: 354 SRAGRLDEAYKFIQRMPLEPTASAWGALLGACR 386
++ R+++A + + + + S L G CR
Sbjct: 419 VKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 2/199 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSW-TSLSSCYVNCGLPRQGLAIF 59
+ S+ ++N++I + K +E A+R F+ L +++VS+ T L N Q +
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF-EQAFKLL 462
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
E+ + +A T +S+L + + + G+ IH V+ G+ N VC+AL+SMY++C
Sbjct: 463 SEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKC 522
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
S+ A VF+ M +R+ +SW ++T + + + L F++M EGVK ++ T+ A++
Sbjct: 523 GSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAIL 582
Query: 180 GGCMENGQTEESLEMLRKM 198
C G E M
Sbjct: 583 SACSHVGLVSEGWRHFNSM 601
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 421 bits (1082), Expect = e-118, Method: Compositional matrix adjust.
Identities = 216/577 (37%), Positives = 327/577 (56%), Gaps = 37/577 (6%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD F+S ALI AY + +C++ A +F+ D+V+W ++ + Y + L +F M
Sbjct: 450 SDSFVSTALIDAYSRNRCMKEAEILFERH-NFDLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G + + T++++ C L +N GK +H +A++ G +++V S ++ MY +C +
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A+ FD +P D V+W +I GC
Sbjct: 569 SAAQFAFDSIPVPDDVAWT-----------------------------------TMISGC 593
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDL 241
+ENG+ E + + +M+ MG P+E TI+++ A S L +L G+++H L+ D
Sbjct: 594 IENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDP 653
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
T+LV MYAKC ++ + +F + ++ AWN M++ A HG GKE L LF+ M
Sbjct: 654 FVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL 713
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G+KP+ VTF GVLS CSHS LV E + SM D+ ++P+ HYSC+ D RAG + +
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQ 773
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A I+ M +E +AS + LL ACRV + E K A KL ++EP + YV L N+ +
Sbjct: 774 AENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAA 833
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
A W E R +MK + K PG SW++V N++H FVV DRSN ++ IY + ++ +
Sbjct: 834 ASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRD 893
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
+K GY P+TD+ L DV++EEK +L HSEKLAVAFG+L+ + IRV KNLR+CGDC
Sbjct: 894 IKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDC 953
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
HNA+KY++ V I++RD+ RFH FK+G CSC D W
Sbjct: 954 HNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 192/379 (50%), Gaps = 42/379 (11%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+SN+LI+ Y K + AR VFD++ RD++SW S+ + GL + + +F ++ G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 67 VKPNAVTVSSILPACSELKD-LNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+KP+ T++S+L A S L + L+ K +H A++ V + FV +AL+ Y+R +KEA
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+F+ + D V+WN ++ Y + + K L LF+ M ++G ++D
Sbjct: 472 EILFE-RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD-------------- 516
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSST 244
+ T++++ C L ++ GK+VH Y ++ DL +
Sbjct: 517 ---------------------DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS 555
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
+ ++ MY KC D++ ++ FD +P D VAW TMI +G + A +F M GV
Sbjct: 556 SGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVL 615
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIF-NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
P+ T + S +++G QI N++ + +P + +VD++++ G +D+AY
Sbjct: 616 PDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAY 673
Query: 364 KFIQRMPLEPTASAWGALL 382
+R+ + +AW A+L
Sbjct: 674 CLFKRIEM-MNITAWNAML 691
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 200/422 (47%), Gaps = 50/422 (11%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVN---CGLP--RQGLAIFH 60
FL N LI Y KC + ARRVFD + RD+VSW S+ + Y C + +Q +F
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFR 134
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+ + V + +T+S +L C + + ++ HG+A + G+ + FV ALV++Y +
Sbjct: 135 ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW----- 175
VKE + +F+ MP+RD V WN +L AY E+ + L S G+ ++ T
Sbjct: 195 KVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLAR 254
Query: 176 -----------------------------NAVIGGCMENGQTEESLEMLRKMQKMGFKPN 206
N + + +GQ L+ M + + +
Sbjct: 255 ISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECD 314
Query: 207 EITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFD 265
++T +L ++SL +G++VHC L+ + L+ + +L+ MY K +R VFD
Sbjct: 315 QVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFD 374
Query: 266 MMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDE 325
M ++D+++WN++I A +G EA+ LF +LR G+KP+ T T VL S + E
Sbjct: 375 NMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPE 431
Query: 326 GLQIFNSMGRDHLVE----PDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
GL + + H ++ D+ + ++D +SR + EA +R + AW A+
Sbjct: 432 GLSLSKQV-HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLV--AWNAM 488
Query: 382 LG 383
+
Sbjct: 489 MA 490
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 153/344 (44%), Gaps = 40/344 (11%)
Query: 44 SCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMV 103
S Y++ G L F +M + V+ + VT +L ++ L G+ +H A++ G+
Sbjct: 288 SEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLD 347
Query: 104 ENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM 163
+ V ++L++MY + AR VFD M RD +SWN V+ N + + LF ++
Sbjct: 348 LMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL 407
Query: 164 SREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL-ES 222
R G+K P++ T++S+L A S L E
Sbjct: 408 LRCGLK-----------------------------------PDQYTMTSVLKAASSLPEG 432
Query: 223 LRMGKEVHCYGLR-HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIA 281
L + K+VH + ++ + + D +TAL+ Y++ + + +F+ D+VAWN M+
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAG 491
Query: 282 NAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP 341
+G + L LF M + G + + T V C +++G Q+ ++ +
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQV-HAYAIKSGYDL 550
Query: 342 DANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGAC 385
D S ++D++ + G + A +P+ P AW ++ C
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 107/252 (42%), Gaps = 49/252 (19%)
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
W G NA+T S DL GK H + F+ + L+SMY++C S+
Sbjct: 42 WFGFLRNAITSS----------DLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLT 91
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKE-----YEKGLALFSRMSREGVKADKATWNAV 178
AR VFD MP RD VSWN +L AY + E ++ LF + ++ V + T + +
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
+ C+ +G S G+ AC I GL
Sbjct: 152 LKLCLHSGYVWASESF------HGY------------ACKI-------------GLD--- 177
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
GD ALV +Y K + + +F+ MP +DVV WN M+ A G +EA+ L
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 299 LRSGVKPNSVTF 310
SG+ PN +T
Sbjct: 238 HSSGLNPNEITL 249
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHG-----NGKEALLLFENMLRS 301
L+ MY+KC L +R VFD MP +D+V+WN+++ A A N ++A LLF + +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
V + +T + +L C HS V + F+ ++ D +V+++ + G++ E
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYV-WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKE 198
Query: 362 AYKFIQRMPLEPTASAWGALLGA 384
+ MP W +L A
Sbjct: 199 GKVLFEEMPYRDVV-LWNLMLKA 220
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 7/149 (4%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
T+D F+ +L+ Y KC I+ A +F + ++ +W ++ G ++ L +F +
Sbjct: 650 TNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQ 709
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSG----KAIHGFAVRHGMVENVFVCSALVSMYA 117
M G+KP+ VT +L ACS ++ +++HG +G+ + S L
Sbjct: 710 MKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG---DYGIKPEIEHYSCLADALG 766
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTA 146
R VK+A + + M + S L A
Sbjct: 767 RAGLVKQAENLIESMSMEASASMYRTLLA 795
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/574 (37%), Positives = 344/574 (59%), Gaps = 6/574 (1%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+ +AL+ Y KC I+ A+R+FD+ ++ +++S YV GL R+ L +F+ M +
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDS 331
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
GV+P+ +++ S + +CS+L+++ GK+ HG+ +R+G +C+AL+ MY +C A
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTA 391
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+FD M ++ V+WN ++ Y N E + F M + + +WN +I G ++
Sbjct: 392 FRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNI----VSWNTIISGLVQG 447
Query: 186 GQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSS 243
EE++E+ MQ + G + +T+ SI AC L +L + K ++ Y ++ I D+
Sbjct: 448 SLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRL 507
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
T LV M+++C D + ++F+ + +DV AW I A AM GN + A+ LF++M+ G+
Sbjct: 508 GTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGL 567
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KP+ V F G L+ CSH LV +G +IF SM + H V P+ HY CMVD+ RAG L+EA
Sbjct: 568 KPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAV 627
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
+ I+ MP+EP W +LL ACRV NVE+A AA+K+ + P G+YV L N+ SA
Sbjct: 628 QLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAG 687
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
W++ +++R+ MK++G+ K PG S +Q+ + H F GD S+ I LDE+ Q+
Sbjct: 688 RWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRAS 747
Query: 484 LAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHN 543
G+ PD VL DVD++EK L HSEKLA+A+G+++ N ++IR+ KNLR+C DCH+
Sbjct: 748 HLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHS 807
Query: 544 AIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDL 577
K+ S V II+RD+ RFH+ + G CSC D
Sbjct: 808 FAKFASKVYNREIILRDNNRFHYIRQGKCSCGDF 841
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 172/370 (46%), Gaps = 44/370 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+F+ N+L+H Y +C ++ AR+VFD++ R+VVSWTS+ Y + + +F M
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 64 WN-GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ V PN+VT+ ++ AC++L+DL +G+ ++ F G+ N + SALV MY +C ++
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A+ +FD + N + + Y + L +F+ M GV
Sbjct: 288 DVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGV-------------- 333
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+P+ I++ S + +CS L ++ GK H Y LR+
Sbjct: 334 ---------------------RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWD 372
Query: 243 ST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ AL+ MY KC + + +FD M K VV WN+++ +G A FE M
Sbjct: 373 NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM--- 429
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
+ N V++ ++SG L +E +++F SM V D + G LD
Sbjct: 430 -PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDL 488
Query: 362 A---YKFIQR 368
A Y +I++
Sbjct: 489 AKWIYYYIEK 498
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 195/419 (46%), Gaps = 46/419 (10%)
Query: 39 WTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAV 98
+ SL Y + GL + + +F M +G+ P+ T L AC++ + +G IHG V
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 99 RHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLA 158
+ G +++FV ++LV YA C + AR VFD M R+ VSW ++ Y + +
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 159 LFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACS 218
LF RM R+ EE PN +T+ ++ AC+
Sbjct: 222 LFFRMVRD----------------------EE------------VTPNSVTMVCVISACA 247
Query: 219 ILESLRMGKEVHCYGLRH---RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
LE L G++V+ + +R+ + DL +ALV MY KC+ +++++ +FD ++
Sbjct: 248 KLEDLETGEKVYAF-IRNSGIEVNDL-MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLC 305
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
N M G +EAL +F M+ SGV+P+ ++ +S CS R + G + R
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 336 DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAK 395
+ D N + ++D++ + R D A++ RM T W +++ +N E+
Sbjct: 366 NGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAG--YVENGEVD- 420
Query: 396 IAAKKLFDIEPN-NPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGN 453
AA + F+ P N ++ ++ + LV L+ EA ++ M+ + G + + + +
Sbjct: 421 -AAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIAS 478
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV L L+ + +C E A +F+ L RDV +WT+ G + + +F +M
Sbjct: 504 DVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMI 563
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARCLSV 122
G+KP+ V L ACS + GK I + HG+ +V + R +
Sbjct: 564 EQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLL 623
Query: 123 KEARAVFDLMP-HRDAVSWNGVLTA 146
+EA + + MP + V WN +L A
Sbjct: 624 EEAVQLIEDMPMEPNDVIWNSLLAA 648
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/562 (38%), Positives = 333/562 (59%), Gaps = 13/562 (2%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
ARRV + + R+ WT++ Y G + +A++ M + P + T S++L AC
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
+KDLN G+ H R V+V + ++ MY +C S+ AR VFD MP RD +SW +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
+ AY E LF + + D W A++ G +N + +E+LE +M+K G
Sbjct: 222 IAAYARVGNMECAAELFESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGI 277
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-----TALVYMYAKCSDLN 258
+ +E+T++ + AC+ L + + + + G S +AL+ MY+KC ++
Sbjct: 278 RADEVTVAGYISACAQLGASKYADRA--VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVE 335
Query: 259 LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RSGVKPNSVTFTGVLSGC 317
+ NVF M K+V +++MI+ A HG +EAL LF M+ ++ +KPN+VTF G L C
Sbjct: 336 EAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC 395
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASA 377
SHS LVD+G Q+F+SM + V+P +HY+CMVD+ R GRL EA + I+ M +EP
Sbjct: 396 SHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGV 455
Query: 378 WGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKD 437
WGALLGACR+ N E+A+IAA+ LF++EP+ GNY+ L N+ SA W ++R L+K+
Sbjct: 456 WGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKE 515
Query: 438 RGITKTPGCSWLQVGN-RVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQ 496
+G+ KTP SW+ N ++H F G+ ++ S+KI + L+EL +++ + GY+PD V
Sbjct: 516 KGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPY 575
Query: 497 DVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTI 556
DV K L H+EKLA+AF +L N S+I + KNLR+C DCH ++ S V G I
Sbjct: 576 DVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVI 635
Query: 557 IVRDSLRFHHFKNGNCSCQDLW 578
I+RD++RFHHF++G+CSC D W
Sbjct: 636 IMRDNMRFHHFRSGDCSCGDFW 657
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 145/342 (42%), Gaps = 92/342 (26%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV---KEARAVFD 130
VSS++ + +LN K IHG +R G+ ++ ++ + L+ + L V AR V +
Sbjct: 49 VSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTK-LGVPMDPYARRVIE 107
Query: 131 LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEE 190
+ R+ W V+ Y ++++ +A++ GCM
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMY--------------------GCM------- 140
Query: 191 SLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR------IGDLSST 244
+K P T S++L AC ++ L +G++ H R R +G+
Sbjct: 141 --------RKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGN---- 188
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGN----------------- 287
++ MY KC ++ +R VFD MP++DV++W +I A A GN
Sbjct: 189 -TMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 288 --------------GKEALLLFENMLRSGVKPNSVTFTGVLSGCSH---SRLVDEGLQIF 330
+EAL F+ M +SG++ + VT G +S C+ S+ D +QI
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 331 NSMG---RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
G DH+V A ++D++S+ G ++EA M
Sbjct: 308 QKSGYSPSDHVVIGSA-----LIDMYSKCGNVEEAVNVFMSM 344
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 112/237 (47%), Gaps = 35/237 (14%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCG-------------- 50
V++ N +I Y KC+ I+ AR+VFD++ RDV+SWT L + Y G
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 51 -----------------LPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAI 93
P++ L F M +G++ + VTV+ + AC++L
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 94 HGFAVRHGM--VENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNK 151
A + G ++V + SAL+ MY++C +V+EA VF M +++ +++ ++ T+
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHG 363
Query: 152 EYEKGLALFSRM-SREGVKADKATWNAVIGGCMENGQTEESLEMLRKM-QKMGFKPN 206
++ L LF M ++ +K + T+ + C +G ++ ++ M Q G +P
Sbjct: 364 RAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPT 420
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 416 bits (1068), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/575 (37%), Positives = 329/575 (57%), Gaps = 37/575 (6%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++NA + +Y KC + A+RVF + + V SW +L + PR L +M +
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 490
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
G+ P++ TV S+L ACS+LK L GK +HGF +R+ + ++FV +++S+Y C +
Sbjct: 491 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 550
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+A+FD M + VSW N VI G ++N
Sbjct: 551 QALFDAMEDKSLVSW-----------------------------------NTVITGYLQN 575
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT 245
G + +L + R+M G + I++ + ACS+L SLR+G+E H Y L+H + D +
Sbjct: 576 GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIA 635
Query: 246 -ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
+L+ MYAK + S VF+ + +K +WN MI+ +HG KEA+ LFE M R+G
Sbjct: 636 CSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHN 695
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P+ +TF GVL+ C+HS L+ EGL+ + M ++P+ HY+C++D+ RAG+LD+A +
Sbjct: 696 PDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALR 755
Query: 365 FI-QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
+ + M E W +LL +CR+ +N+E+ + A KLF++EP P NYV L N+
Sbjct: 756 VVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLG 815
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
W + ++R M + + K GCSW+++ +V +FVVG+R G ++I L K+
Sbjct: 816 KWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKIS 875
Query: 484 LAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHN 543
GY+PDT V D+ +EEK E L HSEKLA+ +G++ + ++IRV+KNLRIC DCHN
Sbjct: 876 KMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHN 935
Query: 544 AIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
A K +S V+ I+VRD+ RFHHFKNG CSC D W
Sbjct: 936 AAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 185/385 (48%), Gaps = 40/385 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ ++ L+NAL+ Y KC CI A+ +F ++VVSW ++ + G +
Sbjct: 323 LDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLR 382
Query: 61 EM--GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+M G VK + VT+ + +P C L S K +H ++++ V N V +A V+ YA+
Sbjct: 383 QMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAK 442
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
C S+ A+ VF + + SW NA+
Sbjct: 443 CGSLSYAQRVFHGIRSKTVNSW-----------------------------------NAL 467
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
IGG ++ SL+ +M+ G P+ T+ S+L ACS L+SLR+GKEVH + +R+ +
Sbjct: 468 IGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL 527
Query: 239 G-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
DL +++ +Y C +L + +FD M K +V+WNT+I +G AL +F
Sbjct: 528 ERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQ 587
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
M+ G++ ++ V CS + G + ++ HL+E DA ++D++++ G
Sbjct: 588 MVLYGIQLCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 358 RLDEAYKFIQRMPLEPTASAWGALL 382
+ ++ K + + TAS W A++
Sbjct: 647 SITQSSKVFNGLKEKSTAS-WNAMI 670
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 41/390 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +D L +I Y C + +R VFD L +++ W ++ S Y L + L F
Sbjct: 116 LRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFI 175
Query: 61 EM-GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM + P+ T ++ AC+ + D+ G A+HG V+ G+VE+VFV +ALVS Y
Sbjct: 176 EMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTH 235
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
V +A +FD+MP R+ VSWN ++ + N E+ L M
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME-------------- 281
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
ENG F P+ T+ ++LP C+ + +GK VH + ++ R+
Sbjct: 282 ----ENGDG-------------AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLD 324
Query: 240 -DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+L AL+ MY+KC + ++ +F M K+VV+WNTM+ + G+ + M
Sbjct: 325 KELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Query: 299 LRSG--VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLV--EPDANHYSCMVDVFS 354
L G VK + VT + C H + ++ + V E AN + V ++
Sbjct: 385 LAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF---VASYA 441
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ G L A + + T ++W AL+G
Sbjct: 442 KCGSLSYAQRVFHGIR-SKTVNSWNALIGG 470
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 108/207 (52%), Gaps = 1/207 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D+F+ +++ Y C + + +FD + + +VSW ++ + Y+ G P + L +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M G++ +++ + ACS L L G+ H +A++H + ++ F+ +L+ MYA+
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S+ ++ VF+ + + SWN ++ Y + ++ + LF M R G D T+ V+
Sbjct: 647 SITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLT 706
Query: 181 GCMENGQTEESLEMLRKMQ-KMGFKPN 206
C +G E L L +M+ G KPN
Sbjct: 707 ACNHSGLIHEGLRYLDQMKSSFGLKPN 733
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 131/327 (40%), Gaps = 59/327 (18%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D F++ +LI Y K I + +VF+ L + SW ++ Y GL ++ + +F
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G P+ +T +L AC+ ++ G + + G+ N+ + ++ M R
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 120 LSVKEA-RAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKG----LALF------------- 160
+ +A R V + M D W +L++ ++ E G LF
Sbjct: 748 GQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLL 807
Query: 161 -----------------SRMSREGVKAD---------KATWNAVIGGCMENGQTE----- 189
RM+ ++ D + ++ V+G +G E
Sbjct: 808 SNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLW 867
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE--VHCYGLRHRIGDLSSTTAL 247
LEM K+ KMG++P+ +++ L +E LR E YGL I TT
Sbjct: 868 SILEM--KISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGL---IKTSEGTTIR 922
Query: 248 VYMYAK-CSDLNLSRNVFDMMPKKDVV 273
VY + C D + + + + ++++V
Sbjct: 923 VYKNLRICVDCHNAAKLISKVMEREIV 949
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 415 bits (1067), Expect = e-116, Method: Compositional matrix adjust.
Identities = 214/577 (37%), Positives = 330/577 (57%), Gaps = 40/577 (6%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVS---WTSLSSCYVNCGLPRQGLAIFHEMG 63
L + LI + C+ ++ AR++FDD+ +++ W +++ Y G PR L ++ +M
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML 228
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ ++P ++S L AC +LKDL G+ IH V+ + V + L+ +Y
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+AR VFD M R+ V TWN++I
Sbjct: 289 DARKVFDGMSERNVV-----------------------------------TWNSLISVLS 313
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLS 242
+ + E + RKMQ+ + T+++ILPACS + +L GKE+H L+ + D+
Sbjct: 314 KKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVP 373
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L+ MY KC ++ SR VFD+M KD+ +WN M+ A++GN +E + LFE M+ SG
Sbjct: 374 LLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESG 433
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V P+ +TF +LSGCS + L + GL +F M + V P HY+C+VD+ RAG++ EA
Sbjct: 434 VAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEA 493
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
K I+ MP +P+AS WG+LL +CR+ NV + +IAAK+LF +EP+NPGNYV + NI A
Sbjct: 494 VKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSN-TGSDKIYEFLDELGQK 481
K+W +IR +MK RG+ K GCSW+QV +++ FV G SD+ + EL +
Sbjct: 554 KMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEA 613
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
++ +GY P+T VL DVD+E KA +C HSE+LA + +++ IR+ KNLR+C DC
Sbjct: 614 IEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADC 673
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
H+ +K +S V I++RD+ RFHHF +G CSC+D W
Sbjct: 674 HSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 104/196 (53%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D + N L+ Y + + AR+VFD + R+VV+W SL S + +F +M
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ 329
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ + T+++ILPACS + L +GK IH ++ +V + ++L+ MY +C V+
Sbjct: 330 EEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVE 389
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+R VFD+M +D SWN +L Y N E+ + LF M GV D T+ A++ GC
Sbjct: 390 YSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCS 449
Query: 184 ENGQTEESLEMLRKMQ 199
+ G TE L + +M+
Sbjct: 450 DTGLTEYGLSLFERMK 465
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV L N+L+ YGKC +E +RRVFD ++ +D+ SW + +CY G + + +F M
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSAL------VSMYA 117
+GV P+ +T ++L CS ++G +G ++ M V AL V +
Sbjct: 431 ESGVAPDGITFVALLSGCS-----DTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILG 485
Query: 118 RCLSVKEARAVFDLMPHRDAVS-WNGVLTA 146
R +KEA V + MP + + S W +L +
Sbjct: 486 RAGKIKEAVKVIETMPFKPSASIWGSLLNS 515
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/584 (38%), Positives = 339/584 (58%), Gaps = 41/584 (7%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+F+S+ALI Y C +E AR+VFD++ R++VSWTS+ Y G +++F ++
Sbjct: 109 SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL 168
Query: 63 ------GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ + +++ + S++ ACS + ++IH F ++ G V V + L+ Y
Sbjct: 169 LVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAY 228
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
A K E G+A+ ++ + V D+ ++N
Sbjct: 229 A---------------------------------KGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKP-NEITISSILPACSILESLRMGKEVHCYGLR 235
+++ ++G + E+ E+ R++ K N IT+S++L A S +LR+GK +H +R
Sbjct: 256 SIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR 315
Query: 236 HRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
+ D+ T+++ MY KC + +R FD M K+V +W MI MHG+ +AL L
Sbjct: 316 MGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALEL 375
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M+ SGV+PN +TF VL+ CSH+ L EG + FN+M VEP HY CMVD+
Sbjct: 376 FPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLG 435
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
RAG L +AY IQRM ++P + W +LL ACR+ KNVELA+I+ +LF+++ +N G Y+
Sbjct: 436 RAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYML 495
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEF 474
L +I A W + ++R++MK+RG+ K PG S L++ VH F++GD + +KIYEF
Sbjct: 496 LSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEF 555
Query: 475 LDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKN 534
L EL +K+ AGY +T V DVD+EEK +L HSEKLA+AFGI+N S++ V KN
Sbjct: 556 LAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKN 615
Query: 535 LRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
LR+C DCHN IK +S +V +VRD+ RFHHFK+G CSC D W
Sbjct: 616 LRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 162/354 (45%), Gaps = 35/354 (9%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
DV SW S+ + G + L F M + P + + ACS L D+ SGK H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE 154
A G ++FV SAL+ MY+ C +++AR VFD +P R+ VSW ++ Y N
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
++LF + + D A + + MG + S++
Sbjct: 160 DAVSLFKDLLVDENDDDDAMF----------------------LDSMG-------LVSVI 190
Query: 215 PACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSD--LNLSRNVFDMMPKKD 271
ACS + + + + +H + ++ +S L+ YAK + + ++R +FD + KD
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKD 250
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP-NSVTFTGVLSGCSHSRLVDEGLQIF 330
V++N+++ A G EA +F ++++ V N++T + VL SHS + G I
Sbjct: 251 RVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ + R L E D + ++D++ + GR++ A K RM +W A++
Sbjct: 311 DQVIRMGL-EDDVIVGTSIIDMYCKCGRVETARKAFDRMK-NKNVRSWTAMIAG 362
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 45/243 (18%)
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
K D +WN+VI +G + E+L M+K+ P + + ACS L + GK+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 229 VH----CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAM 284
H +G + D+ ++AL+ MY+ C L +R VFD +PK+++V+W +MI +
Sbjct: 98 THQQAFVFGYQ---SDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 285 HGNGKEALLLFENML------RSGVKPNSVTFTGVLSGCS-----------HSRLVDEGL 327
+GN +A+ LF+++L + +S+ V+S CS HS ++ G
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGF 214
Query: 328 QIFNSMGR---------------------DHLVEPDANHYSCMVDVFSRAGRLDEAYKFI 366
S+G D +V+ D Y+ ++ V++++G +EA++
Sbjct: 215 DRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVF 274
Query: 367 QRM 369
+R+
Sbjct: 275 RRL 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 2/156 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ DV + ++I Y KC +E AR+ FD + ++V SWT++ + Y G + L +F
Sbjct: 318 LEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFP 377
Query: 61 EMGWNGVKPNAVTVSSILPACSELK-DLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M +GV+PN +T S+L ACS + + + R G+ + +V + R
Sbjct: 378 AMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRA 437
Query: 120 LSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYE 154
+++A + M + D++ W+ +L A +K E
Sbjct: 438 GFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVE 473
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 230/626 (36%), Positives = 341/626 (54%), Gaps = 60/626 (9%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF------HEM 62
N L+ Y K + I AR VF+ + R+VVSWT++ Y+ G+ + ++F +E+
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 63 GW---------NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE--------- 104
W +G A + ++P +KD+ + + G R G V+
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGGLCREGRVDEARLIFDEM 198
Query: 105 ---NVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFS 161
NV + +++ Y + V AR +F++MP + VSW +L Y + E F
Sbjct: 199 RERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFE 258
Query: 162 RMSREGVKA---------------------------DKATWNAVIGGCMENGQTEESLEM 194
M + V A D ATW +I G E+L++
Sbjct: 259 VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAK 253
+MQK G +P+ ++ SIL C+ L SL+ G++VH + +R + D + + L+ MY K
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVK 378
Query: 254 CSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGV 313
C +L ++ VFD KD++ WN++I A HG G+EAL +F M SG PN VT +
Sbjct: 379 CGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAI 438
Query: 314 LSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEP 373
L+ CS++ ++EGL+IF SM V P HYSC VD+ RAG++D+A + I+ M ++P
Sbjct: 439 LTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP 498
Query: 374 TASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRI 433
A+ WGALLGAC+ ++LA++AAKKLF+ EP+N G YV L +I S W + + +R
Sbjct: 499 DATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRK 558
Query: 434 LMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDK-IYEFLDELGQKMKLAGYKPDTD 492
M+ ++K PGCSW++VG +VH F G N I L++ ++ AGY PD
Sbjct: 559 NMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCS 618
Query: 493 YVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVV 552
+VL DVD+EEK +SL HSE+LAVA+G+L L IRV KNLR+CGDCH AIK +S V
Sbjct: 619 HVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVT 678
Query: 553 GVTIIVRDSLRFHHFKNGNCSCQDLW 578
II+RD+ RFHHF NG CSC+D W
Sbjct: 679 EREIILRDANRFHHFNNGECSCRDYW 704
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 103/195 (52%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V NA+I +G+ I ARRVFD + RD +W + Y G + L +F +M
Sbjct: 265 VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GV+P+ ++ SIL C+ L L G+ +H VR ++V+V S L++MY +C + +
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A+ VFD +D + WN +++ Y ++ E+ L +F M G +K T A++ C
Sbjct: 385 AKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSY 444
Query: 185 NGQTEESLEMLRKMQ 199
G+ EE LE+ M+
Sbjct: 445 AGKLEEGLEIFESME 459
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 170/381 (44%), Gaps = 68/381 (17%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPA 80
I AR+ FD L + + SW S+ S Y + GLP++ +F EM
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM------------------ 74
Query: 81 CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSW 140
SE NV + LVS Y + + EAR VF+LMP R+ VSW
Sbjct: 75 -SE--------------------RNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSW 113
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
++ Y + +LF RM + ++ +W + GG +++G+ +++ RK+
Sbjct: 114 TAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKA----RKLYD 165
Query: 201 MGFKPNEITISSILPACSILESL-RMGK--EVHCYGLRHRIGDLSSTTALVYMYAKCSDL 257
M + + ++ + +++ L R G+ E R ++ + T ++ Y + + +
Sbjct: 166 M------MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRV 219
Query: 258 NLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
+++R +F++MP+K V+W +M++ + G ++A FE M +KP + ++ G
Sbjct: 220 DVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM---PMKP-VIACNAMIVGF 275
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA---YKFIQRMPLEPT 374
+ + ++F D + + D + M+ + R G EA + +Q+ + P+
Sbjct: 276 GEVGEISKARRVF-----DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPS 330
Query: 375 ASAWGALLGACRVFKNVELAK 395
+ ++L C +++ +
Sbjct: 331 FPSLISILSVCATLASLQYGR 351
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 162/367 (44%), Gaps = 43/367 (11%)
Query: 109 CSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
CS +S +R + EAR FD + + SWN +++ YF+N ++ LF MS V
Sbjct: 20 CSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV 79
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
+WN ++ G ++N E+ + M P +S ++ +G+
Sbjct: 80 ----VSWNGLVSGYIKNRMIVEARNVFELM------PERNVVSWTAMVKGYMQEGMVGEA 129
Query: 229 VHCYGLRHRIGDLSSTTALVYMYAKCSD---LNLSRNVFDMMPKKDVVAWNTMIIANAMH 285
+ ++S T M+ D ++ +R ++DMMP KDVVA MI
Sbjct: 130 ESLFWRMPERNEVSWTV----MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE 185
Query: 286 GNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANH 345
G EA L+F+ M + N VT+T +++G + VD ++F M E
Sbjct: 186 GRVDEARLIFDEMR----ERNVVTWTTMITGYRQNNRVDVARKLFEVMP-----EKTEVS 236
Query: 346 YSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDI- 404
++ M+ ++ +GR+++A +F + MP++P + ++G V E++K A+++FD+
Sbjct: 237 WTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVG---EISK--ARRVFDLM 291
Query: 405 EPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKT-----------PGCSWLQVGN 453
E + + + EA + M+ +G+ + + LQ G
Sbjct: 292 EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGR 351
Query: 454 RVHTFVV 460
+VH +V
Sbjct: 352 QVHAHLV 358
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV++++ L+ Y KC + A+ VFD +D++ W S+ S Y + GL + L IFHEM
Sbjct: 365 DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMP 424
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARCLSV 122
+G PN VT+ +IL ACS L G I + + V S V M R V
Sbjct: 425 SSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQV 484
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTA 146
+A + + M + DA W +L A
Sbjct: 485 DKAMELIESMTIKPDATVWGALLGA 509
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/582 (37%), Positives = 332/582 (57%), Gaps = 11/582 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D F+ + Y C I AR VFD++ RDVV+W ++ Y GL + +F EM
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ V P+ + + +I+ AC ++ +AI+ F + + + + + +ALV+MYA +
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR F M R+ +++ Y + +F + K D W +I +
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE----KKDLVCWTTMISAYV 320
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH-CYGLRHRIGDLS 242
E+ +E+L + +M G KP+ +++ S++ AC+ L L K VH C + +LS
Sbjct: 321 ESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELS 380
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
AL+ MYAKC L+ +R+VF+ MP+++VV+W++MI A +MHG +AL LF M +
Sbjct: 381 INNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN 440
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V+PN VTF GVL GCSHS LV+EG +IF SM ++ + P HY CMVD+F RA L EA
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ I+ MP+ WG+L+ ACR+ +EL K AAK++ ++EP++ G V + NI
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYARE 560
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
+ W + IR +M+++ + K G S + + H F++GD+ + S++IY LDE+ K+
Sbjct: 561 QRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKL 620
Query: 483 KLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSS------IRVFKNLR 536
KLAGY PD VL DV++EEK + + HSEKLA+ FG++N + IR+ KNLR
Sbjct: 621 KLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLR 680
Query: 537 ICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+C DCH K +S V IIVRD RFH +KNG CSC+D W
Sbjct: 681 VCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 173/358 (48%), Gaps = 7/358 (1%)
Query: 52 PRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSA 111
PR + + + G + + + IL A S++ L G +HG A + + + FV +
Sbjct: 92 PRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETG 151
Query: 112 LVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
+ MYA C + AR VFD M HRD V+WN ++ Y ++ LF M V D
Sbjct: 152 FMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
+ ++ C G + + + + + + +++++ + + M +E
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMARE--- 268
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
+ + + +L +TA+V Y+KC L+ ++ +FD KKD+V W TMI A +EA
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
L +FE M SG+KP+ V+ V+S C++ ++D+ + + + + L E + + + +++
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGL-ESELSINNALIN 387
Query: 352 VFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVE--LAKIAAKKLFDIEPN 407
++++ G LD ++MP S W +++ A + L+ A K ++EPN
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMHGEASDALSLFARMKQENVEPN 444
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S++ ++NALI+ Y KC ++ R VF+ + R+VVSW+S+ + G L++F
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHG-FAVRHGMVENVFVCSALVSMYARC 119
M V+PN VT +L CS + GK I + + + +V ++ R
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 120 LSVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKG 156
++EA V + MP + V W +++A + E E G
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELG 532
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 325/557 (58%), Gaps = 37/557 (6%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
AR +F+ + D+V + S++ Y P + ++F E+ +G+ P+ T S+L AC+
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
K L G+ +H +++ G+ +NV+VC L++MY C V AR VFD +
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI----------- 190
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
V+ +NA+I G + E+L + R+MQ
Sbjct: 191 ------------------------VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYL 226
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLSRN 262
KPNEIT+ S+L +C++L SL +GK +H Y +H + TAL+ M+AKC L+ + +
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 263 VFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
+F+ M KD AW+ MI+A A HG ++++L+FE M V+P+ +TF G+L+ CSH+
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
V+EG + F+ M + P HY MVD+ SRAG L++AY+FI ++P+ PT W LL
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 383 GACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITK 442
AC N++LA+ ++++F+++ ++ G+YV L N+ K W +R +MKDR K
Sbjct: 407 AACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVK 466
Query: 443 TPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQ-DVDQE 501
PGCS ++V N VH F GD + + K++ LDE+ +++KL+GY PDT V+ +++ +
Sbjct: 467 VPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQ 526
Query: 502 EKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDS 561
EK +L HSEKLA+ FG+LN ++IRV KNLR+C DCHNA K +S + G +++RD
Sbjct: 527 EKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDV 586
Query: 562 LRFHHFKNGNCSCQDLW 578
RFHHF++G CSC D W
Sbjct: 587 QRFHHFEDGKCSCGDFW 603
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +V++ LI+ Y +C+ ++ AR VFD +V VV + ++ + Y P + L++F
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM +KPN +T+ S+L +C+ L L+ GK IH +A +H + V V +AL+ M+A+C
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCG 279
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S+ +A ++F+ M ++D +W+ ++ AY + + EK + +F RM E V+ D+ T+ ++
Sbjct: 280 SLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLN 339
Query: 181 GCMENGQTEESLEMLRKM-QKMGFKPN 206
C G+ EE + +M K G P+
Sbjct: 340 ACSHTGRVEEGRKYFSQMVSKFGIVPS 366
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 139/290 (47%), Gaps = 6/290 (2%)
Query: 98 VRHGMVENVFVCSALVSMYARCLSVKEARAV--FDLMPHRDAVSWNGVLTAYFTNKEYEK 155
+H ++ V + ++ + ++C S++E + + + H + VS+ L + T E
Sbjct: 19 TKHSKIDTVNTQNPIL-LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTES 77
Query: 156 GLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
++ + + D +N++ G E + ++ + G P+ T S+L
Sbjct: 78 SMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLK 137
Query: 216 ACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVA 274
AC++ ++L G+++HC ++ + D + L+ MY +C D++ +R VFD + + VV
Sbjct: 138 ACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVC 197
Query: 275 WNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMG 334
+N MI A EAL LF M +KPN +T VLS C+ +D G I +
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI-HKYA 256
Query: 335 RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ H + ++D+F++ G LD+A ++M + T AW A++ A
Sbjct: 257 KKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT-QAWSAMIVA 305
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 407 bits (1047), Expect = e-114, Method: Compositional matrix adjust.
Identities = 220/577 (38%), Positives = 342/577 (59%), Gaps = 24/577 (4%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAI--FHEMGWNG-VKPNAVTVSSI 77
++ A ++F+ + R+ SW ++ + + +AI F+EM + V+PN T S+
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 78 LPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF-------D 130
L AC++ + GK IHG A+++G + FV S LV MY C +K+AR +F D
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 131 LMPHRD-------AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
++ D V WN ++ Y + + LF +M + V +WN +I G
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYS 250
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH--RIGDL 241
NG ++++E+ R+M+K +PN +T+ S+LPA S L SL +G+ +H Y RI D+
Sbjct: 251 LNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV 310
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ AL+ MY+KC + + +VF+ +P+++V+ W+ MI A+HG +A+ F M ++
Sbjct: 311 LGS-ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
GV+P+ V + +L+ CSH LV+EG + F+ M +EP HY CMVD+ R+G LDE
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A +FI MP++P W ALLGACR+ NVE+ K A L D+ P++ G YV+L N+ S
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
WSE S++R+ MK++ I K PGCS + + +H FVV D S+ + +I L E+ K
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDK 549
Query: 482 MKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
++LAGY+P T VL ++++E+K L HSEK+A AFG+++ + IR+ KNLRIC DC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
H++IK +S V I VRD RFHHF++G+CSC D W
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 33/302 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ L N +I Y + + AR +FD + R VVSW ++ S Y G + + +F EM
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
++PN VT+ S+LPA S L L G+ +H +A G+ + + SAL+ MY++C ++
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A VF+ +P + ++W+ ++ + + + + F +M + GV+ + ++ C
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 184 ENGQTEESLEMLRKM---------------------------------QKMGFKPNEITI 210
G EE +M M KP+++
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
++L AC + ++ MGK V + D + AL MYA + + + M +K
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 271 DV 272
D+
Sbjct: 507 DI 508
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCS-------DLNLSRNVFD 265
+ P + ++R ++H ++ G + T A + C+ DL+ + +F+
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKS--GQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFN 83
Query: 266 MMPKKDVVAWNTMIIANAMHGNGKEAL---LLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
MP+++ +WNT+I + K + L +E M V+PN TF VL C+ +
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 323 VDEGLQI 329
+ EG QI
Sbjct: 144 IQEGKQI 150
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/576 (37%), Positives = 327/576 (56%), Gaps = 36/576 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV +L+ Y + A ++FD++ R VV+WT+L S Y G R+ + +F +M
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
GVKP++ + +L AC + DL+SG+ I + M +N FV + LV++YA+C ++
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+AR+VFD M +D V TW+ +I G
Sbjct: 265 KARSVFDSMVEKDIV-----------------------------------TWSTMIQGYA 289
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLS 242
N +E +E+ +M + KP++ +I L +C+ L +L +G+ RH + +L
Sbjct: 290 SNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLF 349
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
AL+ MYAKC + VF M +KD+V N I A +G+ K + +F + G
Sbjct: 350 MANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLG 409
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ P+ TF G+L GC H+ L+ +GL+ FN++ + ++ HY CMVD++ RAG LD+A
Sbjct: 410 ISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDA 469
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
Y+ I MP+ P A WGALL CR+ K+ +LA+ K+L +EP N GNYV L NI
Sbjct: 470 YRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG 529
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
W EA+++R +M +G+ K PG SW+++ +VH F+ D+S+ SDKIY L++LG +M
Sbjct: 530 GRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
Query: 483 KLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCH 542
+L G+ P T++V DV++EEK L HSEKLAVA G+++ + IRV KNLR+CGDCH
Sbjct: 590 RLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCH 649
Query: 543 NAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+K +S + I+VRD+ RFH F NG+CSC D W
Sbjct: 650 EVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 163/366 (44%), Gaps = 35/366 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D FL N L+ + + + +F ++ + SL + +VN L + L +F +
Sbjct: 44 DTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIR 103
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G+ + T +L AC+ G +H V+ G +V ++L+S+Y+ +
Sbjct: 104 KHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLN 163
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A +FD +P R V+W + + Y T+ + + + LF +M GVK D V+ C+
Sbjct: 164 DAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV 223
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
G + +++ M++M + N
Sbjct: 224 HVGDLDSGEWIVKYMEEMEMQKNSFV---------------------------------- 249
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
T LV +YAKC + +R+VFD M +KD+V W+TMI A + KE + LF ML+ +
Sbjct: 250 RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KP+ + G LS C+ +D G + + R H + + ++D++++ G + +
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLIDR-HEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 364 KFIQRM 369
+ + M
Sbjct: 369 EVFKEM 374
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 136/303 (44%), Gaps = 33/303 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M + F+ L++ Y KC +E AR VFD +V +D+V+W+++ Y + P++G+ +F
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M +KP+ ++ L +C+ L L+ G+ RH + N+F+ +AL+ MYA+C
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG 362
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ VF M +D V N ++ N + A+F + + G+ D +T+ ++
Sbjct: 363 AMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 181 GCMENGQTEESLEML---------------------------------RKMQKMGFKPNE 207
GC+ G ++ L R + M +PN
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 208 ITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMM 267
I ++L C +++ ++ + V + + + L +Y+ + + V DMM
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 268 PKK 270
KK
Sbjct: 543 NKK 545
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 121/257 (47%), Gaps = 21/257 (8%)
Query: 134 HRDAVSWNGVL--TAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES 191
H D N +L T +F +Y LFS + +N++I G + N E+
Sbjct: 42 HHDTFLVNLLLKRTLFFRQTKY--SYLLFSHTQFPNI----FLYNSLINGFVNNHLFHET 95
Query: 192 LEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY----GLRHRIGDLSSTTAL 247
L++ ++K G + T +L AC+ S ++G ++H G H D+++ T+L
Sbjct: 96 LDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH---DVAAMTSL 152
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ +Y+ LN + +FD +P + VV W + G +EA+ LF+ M+ GVKP+S
Sbjct: 153 LSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDS 212
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLDEAYKF 365
VLS C H +D G I M +E N + + +V+++++ G++++A
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKYMEE---MEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 366 IQRMPLEPTASAWGALL 382
M +E W ++
Sbjct: 270 FDSM-VEKDIVTWSTMI 285
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 338/610 (55%), Gaps = 40/610 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
N+++ +Y K ++ A + D++ + D+V+W SL S Y + GL + +A+ M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+KP+ ++SS+L A +E L GKAIHG+ +R+ + +V+V + L+ MY + +
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 125 ARAVFDLMPHR-----------------------------------DAVSWNGVLTAYFT 149
AR VFD+M + DA++WN + + Y T
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
+ EK L + +M +GV + +W A+ GC +NG +L++ KMQ+ G PN T
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+S++L L L GKEVH + LR I D TALV MY K DL + +F +
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
K + +WN M++ AM G G+E + F ML +G++P+++TFT VLS C +S LV EG +
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVF 388
F+ M + + P H SCMVD+ R+G LDEA+ FIQ M L+P A+ WGA L +C++
Sbjct: 519 YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Query: 389 KNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSW 448
+++ELA+IA K+L +EP+N NY+ + N+ + W + +IR LM++ + SW
Sbjct: 579 RDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSW 638
Query: 449 LQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLC 508
+Q+ VH F +++ IY L +L +MK +GY PDT + QD+ EK + L
Sbjct: 639 IQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLM 698
Query: 509 NHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFK 568
H+EKLA+ +G++ G + IRV KN IC D H KYMS + I++++ R HHF+
Sbjct: 699 GHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFR 758
Query: 569 NGNCSCQDLW 578
+G CSC D W
Sbjct: 759 DGKCSCNDSW 768
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 207/384 (53%), Gaps = 5/384 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD + +A + YG+C + A ++FD++ RD ++W + + G + + +F EM
Sbjct: 21 SDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREM 80
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
++G K T+ +L CS + G+ IHG+ +R G+ NV +C++L+ MY+R +
Sbjct: 81 QFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKL 140
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ +R VF+ M R+ SWN +L++Y + + L M G+K D TWN+++ G
Sbjct: 141 ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGY 200
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
G +++++ +L++MQ G KP+ +ISS+L A + L++GK +H Y LR+++ D+
Sbjct: 201 ASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDV 260
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
T L+ MY K L +R VFDMM K++VAWN+++ + K+A L M +
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G+KP+++T+ + SG + ++ L + M ++ V P+ ++ + S+ G
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRN 379
Query: 362 AYKFIQRMPLE---PTASAWGALL 382
A K +M E P A+ LL
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLL 403
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 12/167 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D +++ AL+ YGK ++ A +F + + + SW + Y G +G+A F M
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAV------RHGMVENVFVCSALVSMYA 117
G++P+A+T +S+L C NSG G+ R+G++ + CS +V +
Sbjct: 490 EAGMEPDAITFTSVLSVCK-----NSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLG 544
Query: 118 RCLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRM 163
R + EA M + DA W L++ +++ E + R+
Sbjct: 545 RSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 591
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 323/559 (57%), Gaps = 39/559 (6%)
Query: 24 ARRVFDDLVGR-DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG-VKPNAVTVSSILPAC 81
A +VF + +V W +L Y G +++ EM +G V+P+ T ++ A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 82 SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWN 141
+ + D+ G+ IH +R G ++V ++L+ +YA C V A VFD MP +D V+W
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW- 190
Query: 142 GVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM 201
N+VI G ENG+ EE+L + +M
Sbjct: 191 ----------------------------------NSVINGFAENGKPEEALALYTEMNSK 216
Query: 202 GFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLS 260
G KP+ TI S+L AC+ + +L +GK VH Y ++ + +L S+ L+ +YA+C + +
Sbjct: 217 GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEA 276
Query: 261 RNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS-GVKPNSVTFTGVLSGCSH 319
+ +FD M K+ V+W ++I+ A++G GKEA+ LF+ M + G+ P +TF G+L CSH
Sbjct: 277 KTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWG 379
+V EG + F M ++ +EP H+ CMVD+ +RAG++ +AY++I+ MP++P W
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 396
Query: 380 ALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRG 439
LLGAC V + +LA+ A ++ +EPN+ G+YV L N+ S + WS+ +IR M G
Sbjct: 397 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 456
Query: 440 ITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVD 499
+ K PG S ++VGNRVH F++GD+S+ SD IY L E+ +++ GY P V DV+
Sbjct: 457 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVE 516
Query: 500 QEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVR 559
+EEK ++ HSEK+A+AF +++ +S I V KNLR+C DCH AIK +S V I+VR
Sbjct: 517 EEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVR 576
Query: 560 DSLRFHHFKNGNCSCQDLW 578
D RFHHFKNG+CSCQD W
Sbjct: 577 DRSRFHHFKNGSCSCQDYW 595
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 143/291 (49%), Gaps = 35/291 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S +++ N+L+H Y C + A +VFD + +D+V+W S+ + + G P + LA++ EM
Sbjct: 154 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G+KP+ T+ S+L AC+++ L GK +H + ++ G+ N+ + L+ +YARC V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM-SREGVKADKATWNAVIGG 181
+EA+ +FD M +++VSW ++ N ++ + LF M S EG+ + T+ ++
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
C G +E E R+M+ E ++ + +G
Sbjct: 334 CSHCGMVKEGFEYFRRMR---------------------EEYKIEPRIEHFG-------- 364
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEA 291
+V + A+ + + MP + +VV W T++ A +HG+ A
Sbjct: 365 ----CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLA 411
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+T ++ SN L+ Y +C +E A+ +FD++V ++ VSWTSL G ++ + +F
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 61 EM-GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV--------FVCSA 111
M G+ P +T IL ACS + G GF M E F C
Sbjct: 313 YMESTEGLLPCEITFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGC-- 365
Query: 112 LVSMYARCLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+V + AR VK+A MP + + V W +L A + + + LA F+R+ ++
Sbjct: 366 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEP 423
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRK-MQKMGFKPNEITISSILPACSILESLRMGKEV 229
+ + ++ + Q ++ +RK M + G K +P S++E +G V
Sbjct: 424 NHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK--------VPGHSLVE---VGNRV 472
Query: 230 HCYGLRHRIGDLSSTTALVYMYAKCSDLN 258
H + +GD S + +YAK ++
Sbjct: 473 HEF----LMGDKSHPQSDA-IYAKLKEMT 496
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/557 (37%), Positives = 316/557 (56%), Gaps = 6/557 (1%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
A+ VFD D W + + P + L ++ M + NA T S+L ACS
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
L IH + G +V+ ++L++ YA + K A +FD +P D VSWN V
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
+ Y + + L LF +M+ + + +W +I G ++ +E+L++ +MQ
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDV 243
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRN 262
+P+ +++++ L AC+ L +L GK +H Y + RI D L+ MYAKC ++ +
Sbjct: 244 EPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALE 303
Query: 263 VFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
VF + KK V AW +I A HG+G+EA+ F M + G+KPN +TFT VL+ CS++ L
Sbjct: 304 VFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
V+EG IF SM RD+ ++P HY C+VD+ RAG LDEA +FIQ MPL+P A WGALL
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 383 GACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITK 442
ACR+ KN+EL + + L I+P + G YV NI K W +A++ R LMK++G+ K
Sbjct: 424 KACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483
Query: 443 TPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQD-VDQE 501
PGCS + + H F+ GDRS+ +KI + +K++ GY P+ + +L D VD +
Sbjct: 484 VPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDD 543
Query: 502 EKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDS 561
E+ + HSEKLA+ +G++ + IR+ KNLR+C DCH K +S + I++RD
Sbjct: 544 EREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDR 603
Query: 562 LRFHHFKNGNCSCQDLW 578
RFHHF++G CSC D W
Sbjct: 604 TRFHHFRDGKCSCGDYW 620
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 33/254 (12%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N++I Y K ++ A +F + ++ +SWT++ S YV + ++ L +FHEM + V+
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ V++++ L AC++L L GK IH + + + + + L+ MYA+C ++EA V
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F + + +W +++ Y + + ++ F M + G+K + T+ AV+ C G
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 189 EESL---------------------------------EMLRKMQKMGFKPNEITISSILP 215
EE E R +Q+M KPN + ++L
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLK 424
Query: 216 ACSILESLRMGKEV 229
AC I +++ +G+E+
Sbjct: 425 ACRIHKNIELGEEI 438
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L LI Y KC +E A VF ++ + V +WT+L S Y G R+ ++ F EM
Sbjct: 281 DSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ 340
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARCLSV 122
G+KPN +T +++L ACS + GK I + + + + +V + R +
Sbjct: 341 KMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLL 400
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKG 156
EA+ MP + +AV W +L A +K E G
Sbjct: 401 DEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 403 bits (1035), Expect = e-112, Method: Compositional matrix adjust.
Identities = 204/578 (35%), Positives = 336/578 (58%), Gaps = 38/578 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV ALI Y IE A+++FD++ +DVVSW ++ S Y G ++ L +F +M
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
V+P+ T+ +++ AC++ + G+ +H + HG N+ + +AL+ +Y++C ++
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +F+ +P++D + +WN +IGG
Sbjct: 319 TACGLFERLPYKDVI-----------------------------------SWNTLIGGYT 343
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
+E+L + ++M + G PN++T+ SILPAC+ L ++ +G+ +H Y + G ++
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 244 T---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ T+L+ MYAKC D+ + VF+ + K + +WN MI AMHG + LF M +
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G++P+ +TF G+LS CSHS ++D G IF +M +D+ + P HY CM+D+ +G
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA + I M +EP W +LL AC++ NVEL + A+ L IEP NPG+YV L NI
Sbjct: 524 EAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYA 583
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
SA W+E ++ R L+ D+G+ K PGCS +++ + VH F++GD+ + + +IY L+E+
Sbjct: 584 SAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEV 643
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
++ AG+ PDT VLQ++++E K +L +HSEKLA+AFG+++ + + + KNLR+C +
Sbjct: 644 LLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRN 703
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CH A K +S + II RD RFHHF++G CSC D W
Sbjct: 704 CHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/361 (30%), Positives = 196/361 (54%), Gaps = 7/361 (1%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
A VF + +++ W ++ + P L ++ M G+ PN+ T +L +C++
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
K G+ IHG ++ G +++V ++L+SMY + +++A VFD PHRD VS+ +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
+ Y + E LF + + D +WNA+I G E G +E+LE+ + M K
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRN 262
+P+E T+ +++ AC+ S+ +G++VH + H G +L AL+ +Y+KC +L +
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 263 VFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
+F+ +P KDV++WNT+I KEALLLF+ MLRSG PN VT +L C+H
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 323 VDEGLQIFNSMG-RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
+D G I + R V ++ + ++D++++ G ++ A++ + L + S+W A+
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAM 441
Query: 382 L 382
+
Sbjct: 442 I 442
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 110/200 (55%), Gaps = 2/200 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S++ + NALI Y KC +E A +F+ L +DV+SW +L Y + L ++ L +F EM
Sbjct: 299 SNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM 358
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRH--GMVENVFVCSALVSMYARCL 120
+G PN VT+ SILPAC+ L ++ G+ IH + + G+ + ++L+ MYA+C
Sbjct: 359 LRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG 418
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ A VF+ + H+ SWN ++ + + + LFSRM + G++ D T+ ++
Sbjct: 419 DIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLS 478
Query: 181 GCMENGQTEESLEMLRKMQK 200
C +G + + R M +
Sbjct: 479 ACSHSGMLDLGRHIFRTMTQ 498
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS---MYARCLSVKEARAVFDLM 132
S+L C K L S + IH ++ G+ + S L+ + + A +VF +
Sbjct: 38 SLLHNC---KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
+ + WN + + + + L L+ M G+ + T+ V+ C ++ +E
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
++ + K+G + +S++ +++ R+ ++ H + D+ S TAL+ YA
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISM--YVQNGRL-EDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ ++ +FD +P KDVV+WN MI A GN KEAL LF++M+++ V+P+ T
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
V+S C+ S ++ G Q+ + DH + + ++D++S+ G L+ A +R+P +
Sbjct: 272 VVSACAQSGSIELGRQVHLWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK 330
Query: 373 PTASAWGALLGA 384
S W L+G
Sbjct: 331 DVIS-WNTLIGG 341
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 94/199 (47%), Gaps = 13/199 (6%)
Query: 212 SILPACSILESLRM-GKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
S+L C L+SLR+ ++ GL + LS + L + +VF + +
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
+++ WNTM +A+ + AL L+ M+ G+ PNS TF VL C+ S+ EG QI
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 331 N---SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRV 387
+G D D ++ ++ ++ + GRL++A+K + P S + AL+
Sbjct: 158 GHVLKLGCD----LDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS-YTALIKGYAS 212
Query: 388 FKNVELAKIAAKKLFDIEP 406
+E A+KLFD P
Sbjct: 213 RGYIE----NAQKLFDEIP 227
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 208/579 (35%), Positives = 319/579 (55%), Gaps = 43/579 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+ + N+L+ C IE A ++F + +D VSW ++ GL ++ + F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMK 262
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+K + S+LPAC L +N GK IH +R ++++V SAL+ MY +C +
Sbjct: 263 VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLH 322
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A+ VFD M ++ VSW ++ Y E+ + +F M R G+ D
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPD------------ 370
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH----CYGLRHRIG 239
T+ + AC+ + SL G + H GL H +
Sbjct: 371 -----------------------HYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV- 406
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ + +LV +Y KC D++ S +F+ M +D V+W M+ A A G E + LF+ M+
Sbjct: 407 --TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ G+KP+ VT TGV+S CS + LV++G + F M ++ + P HYSCM+D+FSR+GRL
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRL 524
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
+EA +FI MP P A W LL ACR N+E+ K AA+ L +++P++P Y L +I
Sbjct: 525 EEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIY 584
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
S W +Q+R M+++ + K PG SW++ ++H+F D S+ D+IY L+EL
Sbjct: 585 ASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELN 644
Query: 480 QKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
K+ GYKPDT +V DV++ K + L HSE+LA+AFG++ + IRV KNLR+C
Sbjct: 645 NKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCV 704
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCHNA K++S+V G I+VRD++RFH FK+G CSC D W
Sbjct: 705 DCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 204/437 (46%), Gaps = 52/437 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM- 62
+ FL N ++HAY K ARRVFD + ++ SW +L Y GL + + F ++
Sbjct: 40 ETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 63 -----GWN--------------GVKP------------NAVTVSSILPACSELKDLNSGK 91
WN VK VT+ ++L S ++ GK
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNK 151
IHG ++ G + V S L+ MYA + +A+ VF + R+ V +N ++
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 152 EYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITIS 211
E L LF G++ D +W A+I G +NG +E++E R+M+ G K ++
Sbjct: 220 MIEDALQLF-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFG 274
Query: 212 SILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
S+LPAC L ++ GK++H +R D + +AL+ MY KC L+ ++ VFD M +K
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK 334
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
+VV+W M++ G +EA+ +F +M RSG+ P+ T +S C++ ++EG Q
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 331 NSMGRDHLVEPDANHY----SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACR 386
L+ HY + +V ++ + G +D++ + M + S W A++ A
Sbjct: 395 GKAITSGLI-----HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYA 448
Query: 387 VFKNVELAKIAAKKLFD 403
F + +LFD
Sbjct: 449 QFGRA----VETIQLFD 461
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 149/371 (40%), Gaps = 77/371 (20%)
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
K IHG +R F+ + +V YA S AR VFD +P + SWN +L AY
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 151 KEYEKGLALFSRM-SREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPN--E 207
+ + F ++ R+GV TWN +I G +G +++ M + F N
Sbjct: 86 GLISEMESTFEKLPDRDGV-----TWNVLIEGYSLSGLVGAAVKAYNTMMR-DFSANLTR 139
Query: 208 ITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVF 264
+T+ ++L S + +GK++H G ++G L + L+YMYA ++ ++ VF
Sbjct: 140 VTLMTMLKLSSSNGHVSLGKQIH--GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 265 -------------------------DMMP-----KKDVVAWNTMIIANAMHGNGKEALLL 294
D + +KD V+W MI A +G KEA+
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIEC 257
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR------------------- 335
F M G+K + F VL C ++EG QI + R
Sbjct: 258 FREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCK 317
Query: 336 -----------DHLVEPDANHYSCMVDVFSRAGRLDEAYKF---IQRMPLEPTASAWGAL 381
D + + + ++ MV + + GR +EA K +QR ++P G
Sbjct: 318 CKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 382 LGACRVFKNVE 392
+ AC ++E
Sbjct: 378 ISACANVSSLE 388
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 402 bits (1033), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/572 (36%), Positives = 337/572 (58%), Gaps = 13/572 (2%)
Query: 11 LIHAYGKCKCIEGARRVFDDLVGRDVVSWTS-LSSCYVNCGLPRQGLAIFHEMGWNGVKP 69
L AY I + +F + D+ +T+ +++ +N GL Q ++ ++ + + P
Sbjct: 70 LHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASIN-GLKDQAFLLYVQLLSSEINP 128
Query: 70 NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF 129
N T SS+L +CS SGK IH ++ G+ + +V + LV +YA+ V A+ VF
Sbjct: 129 NEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 130 DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
D MP R VS ++T Y E ALF M D +WN +I G ++G
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER----DIVSWNVMIDGYAQHGFPN 240
Query: 190 ESLEMLRKMQKMGF-KPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTAL 247
++L + +K+ G KP+EIT+ + L ACS + +L G+ +H + RI ++ T L
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR-SGVKPN 306
+ MY+KC L + VF+ P+KD+VAWN MI AMHG ++AL LF M +G++P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFI 366
+TF G L C+H+ LV+EG++IF SMG+++ ++P HY C+V + RAG+L AY+ I
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 367 QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWS 426
+ M ++ + W ++LG+C++ + L K A+ L + N G YV L NI S +
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYE 480
Query: 427 EASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAG 486
+++R LMK++GI K PG S +++ N+VH F GDR ++ S +IY L ++ +++K G
Sbjct: 481 GVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
Query: 487 YKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIK 546
Y P+T+ VLQD+++ EK +SL HSE+LA+A+G+++ S +++FKNLR+C DCH K
Sbjct: 541 YVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTK 600
Query: 547 YMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+S + G I++RD RFHHF +G+CSC D W
Sbjct: 601 LISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 148/351 (42%), Gaps = 69/351 (19%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVN--------------C 49
D +++ L+ Y K + A++VFD + R +VS T++ +CY C
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 50 -----------------GLPRQGLAIFHEMGWNG-VKPNAVTVSSILPACSELKDLNSGK 91
G P L +F ++ G KP+ +TV + L ACS++ L +G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNK 151
IH F + NV VC+ L+ MY++C S++EA VF+ P +D V+WN ++ Y +
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 152 EYEKGLALFSRMSR-EGVKADKATWNAVIGGCMENGQTEESLEMLRKM-QKMGFKP---- 205
+ L LF+ M G++ T+ + C G E + + M Q+ G KP
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEH 399
Query: 206 ----------------------------NEITISSILPACSILESLRMGKEVHCYGLRHR 237
+ + SS+L +C + +GKE+ Y +
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLN 459
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV---AWNTMIIANAMH 285
I + L +YA D V ++M +K +V +T+ I N +H
Sbjct: 460 IKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVH 510
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 402 bits (1032), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/586 (38%), Positives = 341/586 (58%), Gaps = 19/586 (3%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDD--LVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+LSNAL Y + A+++FD+ L +D V WT+L S + GL + +F EM
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
V+ + V+V + C++L+DL + HG AV+ G++ +V VC+AL+ MY +C V
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVS 163
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
E + +F+ + + VSW VL + E+G +F M A W ++ G +
Sbjct: 164 EVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVA----WTVMVAGYL 219
Query: 184 ENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI---- 238
G T E LE+L +M + G N +T+ S+L AC+ +L +G+ VH Y L+ +
Sbjct: 220 GAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGE 279
Query: 239 ----GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
D+ TALV MYAKC +++ S NVF +M K++VV WN + AMHG G+ + +
Sbjct: 280 EASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDM 339
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M+R VKP+ +TFT VLS CSHS +VDEG + F+S+ R + +EP +HY+CMVD+
Sbjct: 340 FPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLG 397
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
RAG ++EA ++ MP+ P G+LLG+C V VE+A+ ++L + P N +
Sbjct: 398 RAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQIL 457
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEF 474
+ N+ V+ A +R ++ RGI K PG S + V + VH F GDRS+ + +IY
Sbjct: 458 MSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLK 517
Query: 475 LDELGQKMKLAGYKPDTDYVL--QDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVF 532
L+E+ ++++ AGY PD ++ + D EEK ++LC HSEKLAV FG+L + + VF
Sbjct: 518 LNEVIERIRSAGYVPDVSGLVSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVF 577
Query: 533 KNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
KNLRIC DCH+A+K +S V II+RD RFH FK G+CSC D W
Sbjct: 578 KNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 72/288 (25%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+ V + NAL+ YGKC + +R+F++L + VVSWT + V +G +FHEM
Sbjct: 144 TSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEM 203
Query: 63 ------GWN--------------------------GVKPNAVTVSSILPACSELKDLNSG 90
W G N VT+ S+L AC++ +L G
Sbjct: 204 PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVG 263
Query: 91 KAIHGFAVRHGMV-------ENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
+ +H +A++ M+ ++V V +ALV MYA+C ++ + VF LM R+ V+WN +
Sbjct: 264 RWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNAL 323
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES------------ 191
+ + + + +F +M RE VK D T+ AV+ C +G +E
Sbjct: 324 FSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGL 382
Query: 192 ----------LEMLRK----------MQKMGFKPNEITISSILPACSI 219
+++L + M++M PNE+ + S+L +CS+
Sbjct: 383 EPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/564 (37%), Positives = 328/564 (58%), Gaps = 9/564 (1%)
Query: 19 KCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM--GWNGVKPNAVTVSS 76
K ++ A ++ D + + S+ + +P + + + N +KP+ TV+
Sbjct: 54 KYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNF 113
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRD 136
++ AC+ L+ +G +HG +R G + V + L+S+YA + VF+ +P D
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 137 AVSWNGVLTAYFTNKEYEKGLALFSRMSREGV-KADKATWNAVIGGCMENGQTEESLEML 195
V ++TA G +F+R EG+ + D WNA+I G + G++ E+L +
Sbjct: 174 FVCRTAMVTAC-----ARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF 228
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKC 254
MQ G K N + + S+L AC+ L +L G+ H Y R++I + T LV +YAKC
Sbjct: 229 HLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC 288
Query: 255 SDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVL 314
D+ + VF M +K+V W++ + AM+G G++ L LF M + GV PN+VTF VL
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVL 348
Query: 315 SGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPT 374
GCS VDEG + F+SM + +EP HY C+VD+++RAGRL++A IQ+MP++P
Sbjct: 349 RGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPH 408
Query: 375 ASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRIL 434
A+ W +LL A R++KN+EL +A+KK+ ++E N G YV L NI + W S +R
Sbjct: 409 AAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQS 468
Query: 435 MKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYV 494
MK +G+ K PGCS ++V VH F VGD+S+ +I ++ ++++LAGYK DT V
Sbjct: 469 MKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPV 528
Query: 495 LQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGV 554
+ D+D+EEK ++LC HSEK A+AFGI++L IR+ KNLR+CGDCH +S +
Sbjct: 529 MFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNR 588
Query: 555 TIIVRDSLRFHHFKNGNCSCQDLW 578
IIVRD RFHHFK+G+CSC W
Sbjct: 589 EIIVRDRNRFHHFKDGHCSCNGFW 612
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 141/298 (47%), Gaps = 36/298 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D A++ A +C + AR++F+ + RD ++W ++ S Y G R+ L +FH M
Sbjct: 173 DFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQ 232
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
GVK N V + S+L AC++L L+ G+ H + R+ + V + + LV +YA+C ++
Sbjct: 233 LEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDME 292
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A VF M ++ +W+ L N EK L LFS M ++GV + T+ +V+ GC
Sbjct: 293 KAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCS 352
Query: 184 ENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
G +E M+ + G +P ++ YG
Sbjct: 353 VVGFVDEGQRHFDSMRNEFGIEP----------------------QLEHYG--------- 381
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVA-WNTMIIANAMHGNGKEALLLFENML 299
LV +YA+ L + ++ MP K A W++++ A+ M+ N + +L + ML
Sbjct: 382 ---CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKML 436
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/583 (38%), Positives = 329/583 (56%), Gaps = 47/583 (8%)
Query: 7 LSNALIHAYGKCKCIEGARRVF---DDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++NA + Y K + A VF D+L RD VSW S+ Y + LA++ EM
Sbjct: 175 VNNAFVTYYSKGGLLREAVSVFYGMDEL--RDEVSWNSMIVAYGQHKEGAKALALYKEMI 232
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR---CL 120
+ G K + T++S+L A + L L G+ HG ++ G +N V S L+ Y++ C
Sbjct: 233 FKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD 292
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ ++ VF + D V WN +++ Y N+E +S E VK+
Sbjct: 293 GMYDSEKVFQEILSPDLVVWNTMISGYSMNEE----------LSEEAVKS---------- 332
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
R+MQ++G +P++ + + ACS L S K++H ++ I
Sbjct: 333 --------------FRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 241 --LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+S AL+ +Y K +L +R VFD MP+ + V++N MI A HG+G EALLL++ M
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L SG+ PN +TF VLS C+H VDEG + FN+M +EP+A HYSCM+D+ RAG+
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L+EA +FI MP +P + AW ALLGACR KN+ LA+ AA +L ++P YV L N+
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANM 558
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
A+ W E + +R M+ + I K PGCSW++V + H FV D S+ ++ E+L+E+
Sbjct: 559 YADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEM 618
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAES---LCNHSEKLAVAFGILNLNGQSSIRVFKNL 535
+KMK GY D + + D+ + + L +HSEKLAVAFG+++ + V KNL
Sbjct: 619 MKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNL 678
Query: 536 RICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
RICGDCHNAIK+MS V G IIVRD+LRFH FK+G CSC D W
Sbjct: 679 RICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 161/337 (47%), Gaps = 37/337 (10%)
Query: 85 KDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVL 144
+DL +GK++H V+ + + ++ + V++Y++C + ARA F + S+N ++
Sbjct: 22 RDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIV 81
Query: 145 TAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFK 204
AY + + LF + + D ++N +I G + +T ++ + ++M+K+GF+
Sbjct: 82 KAYAKDSKIHIARQLFDEIP----QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFE 137
Query: 205 PNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNLSRNV 263
+ T+S ++ AC + + + K++HC+ + SS A V Y+K L + +V
Sbjct: 138 VDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 264 FDMMPK-KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS---- 318
F M + +D V+WN+MI+A H G +AL L++ M+ G K + T VL+ +
Sbjct: 196 FYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDH 255
Query: 319 -------HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY---KFIQR 368
H +L+ G + +G S ++D +S+ G D Y K Q
Sbjct: 256 LIGGRQFHGKLIKAGFHQNSHVG------------SGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 369 MPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIE 405
+ L P W ++ + N EL++ A K ++
Sbjct: 304 I-LSPDLVVWNTMISGYSM--NEELSEEAVKSFRQMQ 337
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
++ + ++NALI Y K ++ AR VFD + + VS+ + Y G + L ++
Sbjct: 378 SNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQR 437
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCL 120
M +G+ PN +T ++L AC+ ++ G+ +E S ++ + R
Sbjct: 438 MLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAG 497
Query: 121 SVKEARAVFDLMPHRD-AVSWNGVLTAYFTNKEYEKGLALFSRMSRE 166
++EA D MP++ +V+W +L A K +AL R + E
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGAC----RKHKNMALAERAANE 540
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 214/578 (37%), Positives = 329/578 (56%), Gaps = 38/578 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DVF+ + Y K + + AR++FD++ R++ +W + S V G PR+ + F E
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
PN++T + L ACS+ LN G +HG +R G +V VC+ L+ Y +C ++
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+ +F M ++AVSW ++ AY +
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAY-----------------------------------V 286
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
+N + E++ + + +K + ++ ISS+L AC+ + L +G+ +H + ++ + +
Sbjct: 287 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIF 346
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+ALV MY KC + S FD MP+K++V N++I A G AL LFE M G
Sbjct: 347 VGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 303 V--KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
PN +TF +LS CS + V+ G++IF+SM + +EP A HYSC+VD+ RAG ++
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
AY+FI++MP++PT S WGAL ACR+ +L +AA+ LF ++P + GN+V L N
Sbjct: 467 RAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFA 526
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
+A W+EA+ +R +K GI K G SW+ V N+VH F DRS+ + +I L +L
Sbjct: 527 AAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRN 586
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
+M+ AGYKPD L D+++EEKA + +HSEKLA+AFG+L+L IR+ KNLRICGD
Sbjct: 587 EMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGD 646
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CH+ K++S V IIVRD+ RFH FK+G CSC+D W
Sbjct: 647 CHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 163/368 (44%), Gaps = 41/368 (11%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
FL+N LI+ Y K E AR V R+VVSWTSL S G L F EM
Sbjct: 43 FLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRRE 102
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
GV PN T A + L+ +GK IH AV+ G + +VFV + MY + +A
Sbjct: 103 GVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDA 162
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R +FD +P R+ +W NA I + +
Sbjct: 163 RKLFDEIPERNLETW-----------------------------------NAFISNSVTD 187
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLS 242
G+ E++E + +++ PN IT + L ACS L +G ++H GL R G D+S
Sbjct: 188 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLH--GLVLRSGFDTDVS 245
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
L+ Y KC + S +F M K+ V+W +++ A + ++A +L+ +
Sbjct: 246 VCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDI 305
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V+ + + VLS C+ ++ G I ++ VE S +VD++ + G ++++
Sbjct: 306 VETSDFMISSVLSACAGMAGLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 363 YKFIQRMP 370
+ MP
Sbjct: 365 EQAFDEMP 372
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+DV + N LI YGKCK I + +F ++ ++ VSW SL + YV + ++
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ V+ + +SS+L AC+ + L G++IH AV+ + +FV SALV MY +C +
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+++ FD MP ++ V+ N ++ Y + + LALF M+ G
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGC-------------- 407
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV-----HCYGLRHR 237
G PN +T S+L ACS ++ G ++ YG+
Sbjct: 408 -------------------GPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIE-- 446
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVA-WNTMIIANAMHGNGKEALLLFE 296
+ +V M + + + MP + ++ W + A MHG + LL E
Sbjct: 447 -PGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 297 NMLR 300
N+ +
Sbjct: 506 NLFK 509
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 330/580 (56%), Gaps = 45/580 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL--VGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
D + AL+ AY KC + A R+F ++ VG +VVSWT++ S ++ + + +F E
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M GV+PN T S IL A + S +H V+ + V +AL+ Y +
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
V+EA VF + +D V+ W+A++ G
Sbjct: 444 VEEAAKVFSGIDDKDIVA-----------------------------------WSAMLAG 468
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE-SLRMGKEVHCYGLRHRI-G 239
+ G+TE +++M ++ K G KPNE T SSIL C+ S+ GK+ H + ++ R+
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
L ++AL+ MYAK ++ + VF +KD+V+WN+MI A HG +AL +F+ M
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ VK + VTF GV + C+H+ LV+EG + F+ M RD + P H SCMVD++SRAG+L
Sbjct: 589 KRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQL 648
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
++A K I+ MP ++ W +L ACRV K EL ++AA+K+ ++P + YV L N+
Sbjct: 649 EKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMY 708
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
+ W E +++R LM +R + K PG SW++V N+ ++F+ GDRS+ D+IY L++L
Sbjct: 709 AESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLS 768
Query: 480 QKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
++K GY+PDT YVLQD+D E K L HSE+LA+AFG++ S + + KNLR+CG
Sbjct: 769 TRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCG 828
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHF-KNGNCSCQDLW 578
DCH IK ++ + I+VRDS RFHHF +G CSC D W
Sbjct: 829 DCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 204/430 (47%), Gaps = 68/430 (15%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV + +L+ Y K + R+VFD++ R+VV+WT+L S Y + + L +F M
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQ 186
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G +PN+ T ++ L +E G +H V++G+ + + V ++L+++Y +C +V+
Sbjct: 187 NEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVR 246
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+AR +FD + V+WN +++ Y N GL L
Sbjct: 247 KARILFDKTEVKSVVTWNSMISGYAAN-----GLDL------------------------ 277
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLS 242
E+L M M+ + +E + +S++ C+ L+ LR +++HC +++ + D +
Sbjct: 278 ------EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 243 STTALVYMYAKCSDLNLSRNVF-DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
TAL+ Y+KC+ + + +F ++ +VV+W MI + +EA+ LF M R
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 302 GVKPNSVTFTGVLSGCS-------HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
GV+PN T++ +L+ H+++V + +++G + ++D +
Sbjct: 392 GVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG------------TALLDAYV 439
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLF------DIEPNN 408
+ G+++EA K + + AW A+L E AA K+F I+PN
Sbjct: 440 KLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE----AAIKMFGELTKGGIKPNE 494
Query: 409 PGNYVSLFNI 418
+ S+ N+
Sbjct: 495 -FTFSSILNV 503
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 163/359 (45%), Gaps = 35/359 (9%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
A +FD GRD S+ SL + G ++ +F + G++ + SS+L +
Sbjct: 46 AHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
L D G+ +H ++ G +++V V ++LV Y + + K+ R VFD M R+ V+W +
Sbjct: 106 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTL 165
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
++ Y N ++ L LF RM EG + + T+ A +G E G L++ + K G
Sbjct: 166 ISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG- 224
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNV 263
+ +P + +L+ +Y KC ++ +R +
Sbjct: 225 ------LDKTIPV---------------------------SNSLINLYLKCGNVRKARIL 251
Query: 264 FDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLV 323
FD K VV WN+MI A +G EAL +F +M + V+ + +F V+ C++ + +
Sbjct: 252 FDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKEL 311
Query: 324 DEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
Q+ S+ + + D N + ++ +S+ + +A + + + +W A++
Sbjct: 312 RFTEQLHCSVVKYGFL-FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMI 369
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S + +S+AL+ Y K IE A VF +D+VSW S+ S Y G + L +F
Sbjct: 526 LDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFK 585
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRH-GMVENVFVCSALVSMYARC 119
EM VK + VT + AC+ + G+ VR + S +V +Y+R
Sbjct: 586 EMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA 645
Query: 120 LSVKEARAVFDLMPHRDAVS-WNGVLTAYFTNKEYEKGLALFSRMSREGVKA----DKAT 174
+++A V + MP+ + W +L A +K+ E G R++ E + A D A
Sbjct: 646 GQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELG-----RLAAEKIIAMKPEDSAA 700
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFK 204
+ + E+G +E ++ + M + K
Sbjct: 701 YVLLSNMYAESGDWQERAKVRKLMNERNVK 730
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/577 (36%), Positives = 334/577 (57%), Gaps = 39/577 (6%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
F+ + L+ Y + A ++FD++ RD+VSW SL S Y G + + M +
Sbjct: 67 FIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS 126
Query: 66 --GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G +PN VT S++ AC G+ IHG ++ G++E V V +A ++ Y + +
Sbjct: 127 EVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+ +F+ + ++ VSWN ++ + +
Sbjct: 187 SSCKLFEDLSIKNLVSWNTMIVIH-----------------------------------L 211
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
+NG E+ L +++G +P++ T ++L +C + +R+ + +H + G+
Sbjct: 212 QNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKC 271
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
TTAL+ +Y+K L S VF + D +AW M+ A A HG G++A+ FE M+ G
Sbjct: 272 ITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG 331
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ P+ VTFT +L+ CSHS LV+EG F +M + + ++P +HYSCMVD+ R+G L +A
Sbjct: 332 ISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDA 391
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
Y I+ MP+EP++ WGALLGACRV+K+ +L AA++LF++EP + NYV L NI ++
Sbjct: 392 YGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSAS 451
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
LW +AS+IR LMK +G+ + GCS+++ GN++H FVVGD S+ S+KI + L E+ +KM
Sbjct: 452 GLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKM 511
Query: 483 KLA-GYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
K GYK T++VL DV ++ K E + HSEK+A+AFG+L ++ I + KNLRICGDC
Sbjct: 512 KSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDC 571
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
H K +S + II+RDS RFHHF +G+CSC D W
Sbjct: 572 HETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+V + NA I+ YGK + + ++F+DL +++VSW ++ ++ GL +GLA F+
Sbjct: 168 EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSR 227
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G +P+ T ++L +C ++ + + IHG + G N + +AL+ +Y++ ++
Sbjct: 228 RVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLE 287
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
++ VF + D+++W +L AY T+ + F M G+ D T+ ++ C
Sbjct: 288 DSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACS 347
Query: 184 ENGQTEESLEMLRKMQK 200
+G EE M K
Sbjct: 348 HSGLVEEGKHYFETMSK 364
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/572 (37%), Positives = 320/572 (55%), Gaps = 37/572 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N LI Y KC + AR VF+ + +D VSW S+ S Y+ G + + +F M +
Sbjct: 346 NILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQ 405
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
+ +T ++ + L DL GK +H ++ G+ ++ V +AL+ MYA+C V ++
Sbjct: 406 ADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS--- 462
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
L +FS M D TWN VI C+ G
Sbjct: 463 ----------------------------LKIFSSMG----TGDTVTWNTVISACVRFGDF 490
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTAL 247
L++ +M+K P+ T LP C+ L + R+GKE+HC LR +L AL
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ MY+KC L S VF+ M ++DVV W MI A M+G G++AL F +M +SG+ P+S
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDS 610
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ 367
V F ++ CSHS LVDEGL F M + ++P HY+C+VD+ SR+ ++ +A +FIQ
Sbjct: 611 VVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Query: 368 RMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSE 427
MP++P AS W ++L ACR ++E A+ ++++ ++ P++PG + N + + W +
Sbjct: 671 AMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDK 730
Query: 428 ASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGY 487
S IR +KD+ ITK PG SW++VG VH F GD S S+ IY+ L+ L M GY
Sbjct: 731 VSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Query: 488 KPDTDYVLQDV-DQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIK 546
PD V Q++ ++EEK +C HSE+LA+AFG+LN + ++V KNLR+CGDCH K
Sbjct: 791 IPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTK 850
Query: 547 YMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+S +VG I+VRD+ RFH FK+G CSC+D W
Sbjct: 851 LISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 202/389 (51%), Gaps = 43/389 (11%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+F+ NAL+ Y + + AR+VFD++ RD+VSW SL S Y + G + L I+HE+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ + P++ TVSS+LPA L + G+ +HGFA++ G+ V V + LV+MY +
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+AR VFD M RD+VS+N ++ Y + E+ + +F
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF---------------------- 296
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
LE L + FKP+ +T+SS+L AC L L + K ++ Y L+ L
Sbjct: 297 ---------LENLDQ-----FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV-LE 341
Query: 243 STT--ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
ST L+ +YAKC D+ +R+VF+ M KD V+WN++I G+ EA+ LF+ M+
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMI 401
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGL-QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ + +T+ ++S +RL D + +S G + D + + ++D++++ G +
Sbjct: 402 MEEQADHITYLMLIS--VSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEV 459
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVF 388
++ K M T + W ++ AC F
Sbjct: 460 GDSLKIFSSMGTGDTVT-WNTVISACVRF 487
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 180/402 (44%), Gaps = 52/402 (12%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLV-GRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+ S F S LI Y + + VF + ++V W S+ + GL + L +
Sbjct: 35 LDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFY 94
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
++ + V P+ T S++ AC+ L D G ++ + G ++FV +ALV MY+R
Sbjct: 95 GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 154
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ AR VFD MP RD VSWN +++ Y ++ YE+ L ++ + K +W
Sbjct: 155 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL--------KNSW---- 202
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRI 238
P+ T+SS+LPA L ++ G+ +H + L+
Sbjct: 203 -----------------------IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVN 239
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF-EN 297
+ LV MY K +R VFD M +D V++NTMI +E++ +F EN
Sbjct: 240 SVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN 299
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
+ KP+ +T + VL C H R + I+N M + V ++ + ++DV+++ G
Sbjct: 300 L--DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV-LESTVRNILIDVYAKCG 356
Query: 358 RLDEAYKFIQRMPLEPTASAW----------GALLGACRVFK 389
+ A M + T S W G L+ A ++FK
Sbjct: 357 DMITARDVFNSMECKDTVS-WNSIISGYIQSGDLMEAMKLFK 397
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ +SNALI Y KC + + ++F + D V+W ++ S V G GL + +M
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ V P+ T LP C+ L GK IH +R G + + +AL+ MY++C ++
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLE 561
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+ VF+ M RD V+W G++ AY E EK L F+ M + G+ D + A+I C
Sbjct: 562 NSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 184 ENGQTEESLEMLRKMQ 199
+G +E L KM+
Sbjct: 622 HSGLVDEGLACFEKMK 637
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 111/237 (46%), Gaps = 24/237 (10%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S++ + NALI Y KC C+E + RVF+ + RDVV+WT + Y G + L F +M
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM 601
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRH----GMVENVFVCSALVSMYAR 118
+G+ P++V +I+ ACS ++ G A H M+E+ + C +V + +R
Sbjct: 602 EKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEH-YAC--VVDLLSR 658
Query: 119 CLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVK--ADKATW 175
+ +A MP + DA W VL A T+ + E R+SR ++ D +
Sbjct: 659 SQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA----ERVSRRIIELNPDDPGY 714
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
+ + + + + ++RK K IT + P S +E +GK VH +
Sbjct: 715 SILASNAYAALRKWDKVSLIRK----SLKDKHITKN---PGYSWIE---VGKNVHVF 761
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 218/581 (37%), Positives = 335/581 (57%), Gaps = 48/581 (8%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDD--LVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ F+ ALI Y KC + AR+VF++ + V + +L S Y +F
Sbjct: 86 TEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFR 145
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M GV ++VT+ ++P C+ + L G+++HG V+ G+ V V ++ ++MY +C
Sbjct: 146 RMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCG 205
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
SV E G LF M +G+ TWNAVI
Sbjct: 206 SV-------------------------------EAGRRLFDEMPVKGL----ITWNAVIS 230
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV-HCYGLRHRIG 239
G +NG + LE+ +M+ G P+ T+ S+L +C+ L + ++G EV +
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP 290
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
++ + A + MYA+C +L +R VFD+MP K +V+W MI MHG G+ L+LF++M+
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ G++P+ F VLS CSHS L D+GL++F +M R++ +EP HYSC+VD+ RAGRL
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
DEA +FI+ MP+EP + WGALLGAC++ KNV++A++A K+ + EPNN G YV + NI
Sbjct: 411 DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIY 470
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
+K +IR++M++R K PG S+++ RVH F+ GDRS+ +++++ LDEL
Sbjct: 471 SDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELE 530
Query: 480 QK-MKLAGYKPDTDYVLQDVDQ-EEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRI 537
M+LAG D D+ EE + + HSE+LA+AFGILN + I V KNLR+
Sbjct: 531 TSVMELAGN--------MDCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRV 582
Query: 538 CGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
C DCH +K +S +V +VRD+ RFH+FK+G CSC+D W
Sbjct: 583 CEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 171/374 (45%), Gaps = 40/374 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S+V + N+ I Y KC +E RR+FD++ + +++W ++ S Y GL L ++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M +GV P+ T+ S+L +C+ L G + +G V NVFV +A +SMYARC
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCG 306
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ +ARAVFD+MP + VSW ++ Y + E GL LF M + G++ D A + V+
Sbjct: 307 NLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLS 366
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
C +G T++ LE+ R M++ L G E +
Sbjct: 367 ACSHSGLTDKGLELFRAMKRE-------------------YKLEPGPEHY---------- 397
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ LV + + L+ + + MP + D W ++ A +H N A L F ++
Sbjct: 398 ----SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI 453
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANH----YSCMVDVFSR 355
+PN++ + ++S EG+ M R+ + + V +F
Sbjct: 454 E--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLA 511
Query: 356 AGRLDEAYKFIQRM 369
R E + + RM
Sbjct: 512 GDRSHEQTEEVHRM 525
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 152/336 (45%), Gaps = 46/336 (13%)
Query: 54 QGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALV 113
+ ++++ M +G P+A + IL +C+ L SG+ +H + G FV +AL+
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 114 SMYARCLSVKEARAVFDLMPHRDAVS--WNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
SMY +C V +AR VF+ P +S +N +++ Y N + +F RM GV D
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVD 155
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
+T+ ++P C++ E L +G+ +H
Sbjct: 156 S-----------------------------------VTMLGLVPLCTVPEYLWLGRSLHG 180
Query: 232 YGLRHRIGDLSSTTAL----VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGN 287
++ G L S A+ + MY KC + R +FD MP K ++ WN +I + +G
Sbjct: 181 QCVK---GGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGL 237
Query: 288 GKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYS 347
+ L L+E M SGV P+ T VLS C+H G ++ + + V P+ +
Sbjct: 238 AYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSN 296
Query: 348 CMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLG 383
+ +++R G L +A MP++ S W A++G
Sbjct: 297 ASISMYARCGNLAKARAVFDIMPVKSLVS-WTAMIG 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 5/211 (2%)
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
WN + ES+ + R M + G P+ + IL +C+ L G+++HC+
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 235 RHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD--VVAWNTMIIANAMHGNGKEA 291
+ + TAL+ MY KC + +R VF+ P+ V +N +I + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
+F M +GV +SVT G++ C+ + G + + L + + + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGL-DSEVAVLNSFIT 199
Query: 352 VFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
++ + G ++ + MP++ + W A++
Sbjct: 200 MYMKCGSVEAGRRLFDEMPVKGLIT-WNAVI 229
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 332/576 (57%), Gaps = 41/576 (7%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++N LI+ Y K + +RR F+D + +W+S+ SC+ LP L +M
Sbjct: 51 LVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAG 110
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
++P+ + S +C+ L + G+++H +++ G +VFV S+LV MYA+C + A
Sbjct: 111 NLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYA 170
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R +FD MP R+ V TW+ ++ G +
Sbjct: 171 RKMFDEMPQRNVV-----------------------------------TWSGMMYGYAQM 195
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT 245
G+ EE+L + ++ N+ + SS++ C+ L +G+++H GL + SS+
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIH--GLSIKSSFDSSSF 253
Query: 246 A---LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
LV +Y+KC + VF+ +P K++ WN M+ A A H + ++ + LF+ M SG
Sbjct: 254 VGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG 313
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+KPN +TF VL+ CSH+ LVDEG F+ M ++ +EP HY+ +VD+ RAGRL EA
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEA 372
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ I MP++PT S WGALL +C V KN ELA AA K+F++ P + G ++SL N +
Sbjct: 373 LEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAAD 432
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
+ +A++ R L++DRG K G SW++ N+VHTF G+R + S +IYE L ELG++M
Sbjct: 433 GRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEM 492
Query: 483 KLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCH 542
+ AGY DT YVL++VD +EK +++ HSE+LA+AFG++ IRV KNLR+CGDCH
Sbjct: 493 EKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCH 552
Query: 543 NAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
NAIK+MS IIVRD+ RFH F++G CSC D W
Sbjct: 553 NAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 114/212 (53%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+DVF+ ++L+ Y KC I AR++FD++ R+VV+W+ + Y G + L +F E
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ + N + SS++ C+ L G+ IHG +++ + FV S+LVS+Y++C
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ A VF+ +P ++ WN +L AY + +K + LF RM G+K + T+ V+ C
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
G +E +M++ +P + +S++
Sbjct: 329 SHAGLVDEGRYYFDQMKESRIEPTDKHYASLV 360
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 391 bits (1005), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/575 (36%), Positives = 315/575 (54%), Gaps = 41/575 (7%)
Query: 8 SNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGV 67
SN LI+ Y + + AR+VFD++ R + +W ++ + + +GL++F EM G
Sbjct: 28 SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
P+ T+ S+ + L+ ++ G+ IHG+ +++G+ ++ V S+L MY R +++
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
V MP R+ V+WN +I G +NG
Sbjct: 148 VIRSMPVRNLVAWN-----------------------------------TLIMGNAQNGC 172
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTA- 246
E L + + M+ G +PN+IT ++L +CS L G+++H ++ IG S
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK--IGASSVVAVV 230
Query: 247 --LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RSGV 303
L+ MY+KC L + F +D V W++MI A HG G EA+ LF M ++ +
Sbjct: 231 SSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNM 290
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+ N V F +L CSHS L D+GL++F+ M + +P HY+C+VD+ RAG LD+A
Sbjct: 291 EINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAE 350
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
I+ MP++ W LL AC + KN E+A+ K++ I+PN+ YV L N+ SAK
Sbjct: 351 AIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAK 410
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
W + S++R M+D+ + K G SW + VH F +GDRS + S +IY +L EL +MK
Sbjct: 411 RWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMK 470
Query: 484 LAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHN 543
L GYKPDT VL D+D+EEK L HSEKLAVAF ++ L + IR+ KNLR+C DCH
Sbjct: 471 LKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHV 530
Query: 544 AIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
A KY+S + I +RD RFHHF NG CSC D W
Sbjct: 531 AFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 117/218 (53%), Gaps = 5/218 (2%)
Query: 113 VSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+SMY++ A AV+ M ++ +S N ++ Y + +F M +
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL---- 56
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
TWNA+I G ++ EE L + R+M +GF P+E T+ S+ + L S+ +G+++H Y
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 233 GLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
+++ + DL ++L +MY + L V MP +++VAWNT+I+ NA +G +
Sbjct: 117 TIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETV 176
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
L L++ M SG +PN +TF VLS CS + +G QI
Sbjct: 177 LYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI 214
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 147/306 (48%), Gaps = 39/306 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ ++++L H Y + ++ V + R++V+W +L G P L ++ M
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G +PN +T ++L +CS+L G+ IH A++ G V V S+L+SMY++C +
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE-GVKADKATWNAVIGGC 182
+A F D V W+ +++AY + + ++ + LF+ M+ + ++ ++ + ++ C
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304
Query: 183 MENGQTEESLEMLRKM-QKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
+G ++ LE+ M +K GFKP GL+H
Sbjct: 305 SHSGLKDKGLELFDMMVEKYGFKP---------------------------GLKH----- 332
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
T +V + + L+ + + MP K D+V W T++ A +H N + A +F+ +L+
Sbjct: 333 --YTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 390
Query: 301 SGVKPN 306
+ PN
Sbjct: 391 --IDPN 394
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Query: 229 VHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG 288
V YG R R + S+ L+ Y + DL +R VFD MP + + WN MI
Sbjct: 14 VAVYG-RMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFN 72
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
+E L LF M G P+ T V SG + R V G QI + + +E D S
Sbjct: 73 EEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIK-YGLELDLVVNSS 131
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+ ++ R G+L + I+ MP+ AW L+
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLV-AWNTLI 164
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 389 bits (999), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/582 (35%), Positives = 319/582 (54%), Gaps = 48/582 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S+ + +++ Y KC + GA+RVFD + + V+ T L Y G R L +F
Sbjct: 215 LCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
++ GV+ ++ S +L AC+ L++LN GK IH + G+ V V + LV Y +C
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS 334
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S + A F +E + + +W+A+I
Sbjct: 335 SFESACRAF-----------------------------------QEIREPNDVSWSAIIS 359
Query: 181 GCMENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGL-RHRI 238
G + Q EE+++ + ++ K N T +SI ACS+L +G +VH + R I
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
G +AL+ MY+KC L+ + VF+ M D+VAW I +A +GN EAL LFE M
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
+ G+KPNSVTF VL+ CSH+ LV++G ++M R + V P +HY CM+D+++R+G
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
LDEA KF++ MP EP A +W L C KN+EL +IA ++L ++P + YV FN+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
A W EA+++ LM +R + K CSW+Q ++H F+VGD+ + + +IYE L E
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF 659
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQ--SSIRVFKNLR 536
M+ ++ + E+ E L +HSE+LA+AFG+++++G + I+VFKNLR
Sbjct: 660 DGFMEGDMFQ---------CNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLR 710
Query: 537 ICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
C DCH K++S V G I++RDS RFHHFK G CSC D W
Sbjct: 711 ACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 43/346 (12%)
Query: 54 QGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVEN--VFVCSA 111
+ EM GV ++ + + AC EL+ L+ G+ +H +R G +EN V + +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMG-IENPSVLLQNC 123
Query: 112 LVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
++ MY C S+++A +FD M +AVS +++AY +K + LFS M G
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD--- 180
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
KP +++L + +L G+++H
Sbjct: 181 --------------------------------KPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 232 YGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
+ +R + + S T +V MY KC L ++ VFD M K VA +++ G ++
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
AL LF +++ GV+ +S F+ VL C+ ++ G QI + + L E + + + +V
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGL-ESEVSVGTPLV 327
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALL-GACRVFKNVELAK 395
D + + + A + Q + EP +W A++ G C++ + E K
Sbjct: 328 DFYIKCSSFESACRAFQEIR-EPNDVSWSAIISGYCQMSQFEEAVK 372
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 388 bits (997), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/578 (35%), Positives = 318/578 (55%), Gaps = 40/578 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+ ++ + LI Y K ++ A + G+DVVSWT++ + Y + L F +M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G++ + V +++ + AC+ L+ L G+ IH A G ++ +ALV++Y+RC ++
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
E+ Y ++ E G D WNA++ G
Sbjct: 644 ES---------------------YLAFEQTEAG--------------DNIAWNALVSGFQ 668
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
++G EE+L + +M + G N T S + A S +++ GK+VH + + G S
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH--AVITKTGYDSE 726
Query: 244 T---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
T AL+ MYAKC ++ + F + K+ V+WN +I A + HG G EAL F+ M+
Sbjct: 727 TEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIH 786
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
S V+PN VT GVLS CSH LVD+G+ F SM ++ + P HY C+VD+ +RAG L
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLS 846
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
A +FIQ MP++P A W LL AC V KN+E+ + AA L ++EP + YV L N+
Sbjct: 847 RAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
+K W R MK++G+ K PG SW++V N +H+F VGD+++ +D+I+E+ +L +
Sbjct: 907 VSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTK 966
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
+ GY D +L ++ E+K + HSEKLA++FG+L+L I V KNLR+C D
Sbjct: 967 RASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCND 1026
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CH IK++S V IIVRD+ RFHHF+ G CSC+D W
Sbjct: 1027 CHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 178/397 (44%), Gaps = 40/397 (10%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N LI Y + ++ ARRVFD L +D SW ++ S + + +F +M G+
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P SS+L AC +++ L G+ +HG ++ G + +VC+ALVS+Y ++ A +
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F M RDAV++N ++ EK + LF RM +G++ D T +++ C +G
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTL 405
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALV 248
++ K+GF N AL+
Sbjct: 406 FRGQQLHAYTTKLGFASNN----------------------------------KIEGALL 431
Query: 249 YMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSV 308
+YAKC+D+ + + F ++VV WN M++A + + + + +F M + PN
Sbjct: 432 NLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQY 491
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC--MVDVFSRAGRLDEAYKFI 366
T+ +L C ++ G QI + + + + N Y C ++D++++ G+LD A+ +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 367 QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD 403
R + S W ++ + + A +++ D
Sbjct: 549 IRFAGKDVVS-WTTMIAGYTQYNFDDKALTTFRQMLD 584
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 180/398 (45%), Gaps = 44/398 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+SD ++ NAL+ Y + A +F ++ RD V++ +L + CG + + +F
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M +G++P++ T++S++ ACS L G+ +H + + G N + AL+++YA+C
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ A F + V WN +L AY + +F +M E + ++ T+ +++
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
C+ G E ++ ++ K F+ N CS+
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYV-------CSV--------------------- 530
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
L+ MYAK L+ + ++ KDVV+W TMI + +AL F ML
Sbjct: 531 ------LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD 584
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G++ + V T +S C+ + + EG QI ++ D + +V ++SR G+++
Sbjct: 585 RGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 361 EAYKFIQRMPLEPTAS----AWGALLGACRVFKNVELA 394
E+Y + E T + AW AL+ + N E A
Sbjct: 644 ESY-----LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 41/327 (12%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
LS L Y + GA +VFD++ R + +W + + L + +F M
Sbjct: 122 LSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN 181
Query: 67 VKPNAVTVSSILPACSELK-DLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
V PN T S +L AC + + IH + G+ ++ VC+ L+ +Y+R V A
Sbjct: 182 VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLA 241
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R VFD + +D SW A+I G +N
Sbjct: 242 RRVFDGLRLKDHSSW-----------------------------------VAMISGLSKN 266
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST- 244
E++ + M +G P SS+L AC +ESL +G+++H GL ++G S T
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLH--GLVLKLGFSSDTY 324
Query: 245 --TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
ALV +Y +L + ++F M ++D V +NT+I + G G++A+ LF+ M G
Sbjct: 325 VCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG 384
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQI 329
++P+S T ++ CS + G Q+
Sbjct: 385 LEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 33/285 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+SD+ NAL+ Y +C IE + F+ D ++W +L S + G + L +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M G+ N T S + A SE ++ GK +H + G VC+AL+SMYA+C
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S+ +A F + ++ VSWN ++ AY + + L F +M V+ + T V+
Sbjct: 742 SISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLS 801
Query: 181 GCMENGQTEESLEMLRKM---------------------------------QKMGFKPNE 207
C G ++ + M Q+M KP+
Sbjct: 802 ACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDA 861
Query: 208 ITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
+ ++L AC + +++ +G+ + L D ++ L +YA
Sbjct: 862 LVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYA 906
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 167/414 (40%), Gaps = 72/414 (17%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+S++ I +G + ++ R VF L G S+ ++S Y++ Q I + G
Sbjct: 23 VSSSFIFIHGVPRKLK-TRTVFPTLCGTRRASFAAIS-VYISEDESFQEKRI-DSVENRG 79
Query: 67 VKPNAVTVSSILPACSELK-DLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
++PN T+ +L C + L+ G+ +H ++ G+ N + L Y + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
VFD MP R +WN ++ + + LF RM E V ++ T++ V+ C
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST- 244
+ +E ++H L + D +
Sbjct: 200 SVAFDVVE----------------------------------QIHARILYQGLRDSTVVC 225
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
L+ +Y++ ++L+R VFD + KD +W MI + + EA+ LF +M G+
Sbjct: 226 NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIM 285
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIF--------------------------NSMGRDHL 338
P F+ VLS C ++ G Q+ N + +H+
Sbjct: 286 PTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHI 345
Query: 339 V----EPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGAC 385
+ DA Y+ +++ S+ G ++A + +RM LEP ++ +L+ AC
Sbjct: 346 FSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 143/352 (40%), Gaps = 73/352 (20%)
Query: 189 EESLEMLR--KMQKMGFKPNEITISSILPACSILE-SLRMGKEVHCYGLRHRI---GDLS 242
+ES + R ++ G +PN T+ +L C SL G+++H L+ + G LS
Sbjct: 64 DESFQEKRIDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLS 123
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
Y++ DL + VFD MP++ + WN MI A E LF M+
Sbjct: 124 EKLFDFYLFK--GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSEN 181
Query: 303 VKPNSVTFTGVLSGCS------------HSRLVDEGLQI----------------FNSMG 334
V PN TF+GVL C H+R++ +GL+ F +
Sbjct: 182 VTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLA 241
Query: 335 R---DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRVF 388
R D L D + + M+ S+ EA + M + PT A+ ++L AC+
Sbjct: 242 RRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI 301
Query: 389 KNVELAK----IAAKKLFDIEPNNPGNYVSLF----NILVSAKLWSEASQIRILMKDRGI 440
+++E+ + + K F + VSL+ N++ + ++S SQ + + I
Sbjct: 302 ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLI 361
Query: 441 TKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTD 492
C + G+++ EL ++M L G +PD++
Sbjct: 362 NGLSQCGY------------GEKAM-----------ELFKRMHLDGLEPDSN 390
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 387 bits (993), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/497 (39%), Positives = 295/497 (59%), Gaps = 37/497 (7%)
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
+ D+ G+ IH +R G ++V ++L+ +YA C V A VFD MP +D V+W
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW--- 57
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
N+VI G ENG+ EE+L + +M G
Sbjct: 58 --------------------------------NSVINGFAENGKPEEALALYTEMNSKGI 85
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRN 262
KP+ TI S+L AC+ + +L +GK VH Y ++ + +L S+ L+ +YA+C + ++
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 263 VFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS-GVKPNSVTFTGVLSGCSHSR 321
+FD M K+ V+W ++I+ A++G GKEA+ LF+ M + G+ P +TF G+L CSH
Sbjct: 146 LFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCG 205
Query: 322 LVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
+V EG + F M ++ +EP H+ CMVD+ +RAG++ +AY++I+ MP++P W L
Sbjct: 206 MVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTL 265
Query: 382 LGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGIT 441
LGAC V + +LA+ A ++ +EPN+ G+YV L N+ S + WS+ +IR M G+
Sbjct: 266 LGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVK 325
Query: 442 KTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQE 501
K PG S ++VGNRVH F++GD+S+ SD IY L E+ +++ GY P V DV++E
Sbjct: 326 KVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEE 385
Query: 502 EKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDS 561
EK ++ HSEK+A+AF +++ +S I V KNLR+C DCH AIK +S V I+VRD
Sbjct: 386 EKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDR 445
Query: 562 LRFHHFKNGNCSCQDLW 578
RFHHFKNG+CSCQD W
Sbjct: 446 SRFHHFKNGSCSCQDYW 462
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 142/287 (49%), Gaps = 35/287 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S +++ N+L+H Y C + A +VFD + +D+V+W S+ + + G P + LA++ EM
Sbjct: 21 SLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 80
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G+KP+ T+ S+L AC+++ L GK +H + ++ G+ N+ + L+ +YARC V
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM-SREGVKADKATWNAVIGG 181
+EA+ +FD M +++VSW ++ N ++ + LF M S EG+ + T+ ++
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
C G +E E R+M+ E ++ + +G
Sbjct: 201 CSHCGMVKEGFEYFRRMR---------------------EEYKIEPRIEHFG-------- 231
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGN 287
+V + A+ + + MP + +VV W T++ A +HG+
Sbjct: 232 ----CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 274
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 36/269 (13%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+T ++ SN L+ Y +C +E A+ +FD++V ++ VSWTSL G ++ + +F
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 61 EM-GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV--------FVCSA 111
M G+ P +T IL ACS + G GF M E F C
Sbjct: 180 YMESTEGLLPCEITFVGILYACS-----HCGMVKEGFEYFRRMREEYKIEPRIEHFGC-- 232
Query: 112 LVSMYARCLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+V + AR VK+A MP + + V W +L A + + + LA F+R+ ++
Sbjct: 233 MVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEP 290
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRK-MQKMGFKPNEITISSILPACSILESLRMGKEV 229
+ + ++ + Q ++ +RK M + G K +P S++E +G V
Sbjct: 291 NHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK--------VPGHSLVE---VGNRV 339
Query: 230 HCYGLRHRIGDLSSTTALVYMYAKCSDLN 258
H + +GD S + +YAK ++
Sbjct: 340 HEF----LMGDKSHPQSDA-IYAKLKEMT 363
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/579 (34%), Positives = 339/579 (58%), Gaps = 13/579 (2%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
L+N L++ YGKC A +VFD++ RD ++W S+ + L + L++F +G +
Sbjct: 40 LANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSS 99
Query: 67 -VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
++P+ S+++ AC+ L ++ G+ +H + + V S+LV MYA+C + A
Sbjct: 100 GLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSA 159
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+AVFD + ++ +SW +++ Y + E+ L LF + + + +W A+I G +++
Sbjct: 160 KAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY----SWTALISGFVQS 215
Query: 186 GQTEESLEMLRKMQKMGFKP-NEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS- 243
G+ E+ + +M++ + + +SSI+ AC+ L + G++VH GL +G S
Sbjct: 216 GKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVH--GLVIALGFDSCV 273
Query: 244 --TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ AL+ MYAKCSD+ ++++F M +DVV+W ++I+ A HG ++AL L+++M+
Sbjct: 274 FISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSH 333
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
GVKPN VTF G++ CSH V++G ++F SM +D+ + P HY+C++D+ R+G LDE
Sbjct: 334 GVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDE 393
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELA-KIAAKKLFDIEPNNPGNYVSLFNILV 420
A I MP P W ALL AC+ ++ +IA + + +P Y+ L NI
Sbjct: 394 AENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYA 453
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
SA LW + S+ R + + + K PG S ++V F G+ S+ + I+ L +L +
Sbjct: 454 SASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEE 513
Query: 481 KMKLA-GYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
+M++ GY PDT ++L D+D++EK + L HSE+ AVA+G+L + IR+ KNLR+CG
Sbjct: 514 EMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCG 573
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH +K++S + IIVRD+ R+HHFK G CSC D W
Sbjct: 574 DCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCNDFW 612
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 66/333 (19%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+D + ++L+ Y KC + A+ VFD + ++ +SWT++ S Y G + L +F
Sbjct: 137 ANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRI 196
Query: 62 M------GWNGVKP--------------------------NAVTVSSILPACSELKDLNS 89
+ W + + + +SSI+ AC+ L +
Sbjct: 197 LPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIA 256
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
G+ +HG + G VF+ +AL+ MYA+C V A+ +F M HRD VSW ++
Sbjct: 257 GRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ 316
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
+ + EK LAL+ M GVK ++ T+ +I C G E+ E+ + M K
Sbjct: 317 HGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKD-------- 368
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP- 268
YG+R L T L+ + + L+ + N+ MP
Sbjct: 369 ----------------------YGIR---PSLQHYTCLLDLLGRSGLLDEAENLIHTMPF 403
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
D W ++ A G G+ + + ++++ S
Sbjct: 404 PPDEPTWAALLSACKRQGRGQMGIRIADHLVSS 436
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 39/262 (14%)
Query: 78 LPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDA 137
L C+ + L + KA+H V+ G+V+ + + LV++Y +C + A VFD MPHRD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 138 VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRK 197
++W VLTA N+ G L S
Sbjct: 70 IAWASVLTAL--NQANLSGKTLSVFSS--------------------------------V 95
Query: 198 MQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSD 256
G +P++ S+++ AC+ L S+ G++VHC+ + D ++LV MYAKC
Sbjct: 96 GSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGL 155
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
LN ++ VFD + K+ ++W M+ A G +EAL LF + VK N ++T ++SG
Sbjct: 156 LNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL---PVK-NLYSWTALISG 211
Query: 317 CSHSRLVDEGLQIFNSMGRDHL 338
S E +F M R+ +
Sbjct: 212 FVQSGKGLEAFSVFTEMRRERV 233
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/587 (34%), Positives = 333/587 (56%), Gaps = 13/587 (2%)
Query: 1 MTSDVFLSNALI------HAYGKCKCIEG-ARRVFDDLVGRDVVSWTSLSSCYVNCGLPR 53
+ SDVF+++ L+ + K + G A +F + ++ + L C+ P
Sbjct: 40 LISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPS 99
Query: 54 QGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALV 113
+ + +M + + P+ +T ++ A SE++ + G+ H VR G +V+V ++LV
Sbjct: 100 KAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLV 159
Query: 114 SMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKA 173
MYA C + A +F M RD VSW ++ Y E +F M +
Sbjct: 160 HMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNL----F 215
Query: 174 TWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYG 233
TW+ +I G +N E+++++ M++ G NE + S++ +C+ L +L G+ + Y
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYV 275
Query: 234 LR-HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
++ H +L TALV M+ +C D+ + +VF+ +P+ D ++W+++I A+HG+ +A+
Sbjct: 276 VKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAM 335
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
F M+ G P VTFT VLS CSH LV++GL+I+ +M +DH +EP HY C+VD+
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNY 412
RAG+L EA FI +M ++P A GALLGAC+++KN E+A+ L ++P + G Y
Sbjct: 396 LGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYY 455
Query: 413 VSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVG-DRSNTGSDKI 471
V L NI A W + +R +MK++ + K PG S +++ +++ F +G D+ + KI
Sbjct: 456 VLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Query: 472 YEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRV 531
+E+ K++L GYK +T DVD+EEK S+ HSEKLA+A+G++ ++IR+
Sbjct: 516 RRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRI 575
Query: 532 FKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
KNLR+C DCH K +S V G +IVRD RFHHF+NG CSC+D W
Sbjct: 576 VKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 151/322 (46%), Gaps = 21/322 (6%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE-------ARAV 128
++L +CS DL K IHGF +R ++ +VFV S L+++ + + A +
Sbjct: 17 ALLQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F + + + +N ++ + T E K +++M + + D T+ +I E
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 189 EESLEMLRKMQKMGFKPN---EITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT 245
+ ++ + GF+ + E ++ + C + + G+ G R D+ S T
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAA--AGRIFGQMGFR----DVVSWT 187
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
++V Y KC + +R +FD MP +++ W+ MI A + ++A+ LFE M R GV
Sbjct: 188 SMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVA 247
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
N V+S C+H ++ G + + + + H+ + + +VD+F R G +++A
Sbjct: 248 NETVMVSVISSCAHLGALEFGERAYEYVVKSHMT-VNLILGTALVDMFWRCGDIEKAIHV 306
Query: 366 IQRMPLEPTASAWGALLGACRV 387
+ +P E + +W +++ V
Sbjct: 307 FEGLP-ETDSLSWSSIIKGLAV 327
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 381 bits (979), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/578 (34%), Positives = 334/578 (57%), Gaps = 40/578 (6%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++ N ++ + KC I ARR+FD++ R++ S+ S+ S +VN G + +F M
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEE 218
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
T + +L A + L + GK +H A++ G+V+N FV L+ MY++C +++A
Sbjct: 219 LSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDA 278
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R F+ MP + V+WN VI G +
Sbjct: 279 RCAFECMPEKTTVAWNN-----------------------------------VIAGYALH 303
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSST 244
G +EE+L +L M+ G ++ T+S ++ + L L + K+ H +R+ ++ +
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN 363
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
TALV Y+K ++ +R VFD +P+K++++WN ++ A HG G +A+ LFE M+ + V
Sbjct: 364 TALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVA 423
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
PN VTF VLS C++S L ++G +IF SM H ++P A HY+CM+++ R G LDEA
Sbjct: 424 PNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIA 483
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
FI+R PL+ T + W ALL ACR+ +N+EL ++ A+KL+ + P GNYV ++N+ S
Sbjct: 484 FIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGK 543
Query: 425 WSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDR----SNTGSDKIYEFLDELGQ 480
+EA+ + ++ +G++ P C+W++VG++ H+F+ GDR + T +IY+ +DEL +
Sbjct: 544 TAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQIYQKVDELME 603
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
++ GY + ++L DVD++E+ HSEKLA+A+G++N + +++ +N RIC +
Sbjct: 604 EISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQITQNHRICKN 663
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CH ++++S V G ++VRD+ RFHHFK G CSC W
Sbjct: 664 CHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 179/403 (44%), Gaps = 46/403 (11%)
Query: 22 EGARRVFDDL-VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN-GVKPNAVTVSSILP 79
E ++ DD + + V+ S V C R+ +F + K T +++
Sbjct: 72 ESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVE 131
Query: 80 ACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVS 139
AC LK + K ++GF + +G ++ + ++ M+ +C + +AR +FD +P R+ S
Sbjct: 132 ACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYS 191
Query: 140 WNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ 199
+ +++ + Y + LF M E + + +T MLR
Sbjct: 192 YYSIISGFVNFGNYVEAFELFKMMWEE----------------LSDCETHTFAVMLRASA 235
Query: 200 KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT-ALVYMYAKCSDLN 258
+G S+ +GK++H L+ + D + + L+ MY+KC D+
Sbjct: 236 GLG-------------------SIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIE 276
Query: 259 LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
+R F+ MP+K VAWN +I A+HG +EAL L +M SGV + T + ++ +
Sbjct: 277 DARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRIST 336
Query: 319 HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAW 378
++ Q S+ R+ E + + +VD +S+ GR+D A ++P + S W
Sbjct: 337 KLAKLELTKQAHASLIRNGF-ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIIS-W 394
Query: 379 GALLGACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFNIL 419
AL+G + N A KLF+ I N N+V+ +L
Sbjct: 395 NALMGG---YANHGRGTDAV-KLFEKMIAANVAPNHVTFLAVL 433
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 103/206 (50%), Gaps = 1/206 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ + F+S LI Y KC IE AR F+ + + V+W ++ + Y G + L + +
Sbjct: 255 VVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLY 314
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M +GV + T+S ++ ++L L K H +R+G + +ALV Y++
Sbjct: 315 DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWG 374
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
V AR VFD +P ++ +SWN ++ Y + + LF +M V + T+ AV+
Sbjct: 375 RVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLS 434
Query: 181 GCMENGQTEESLEMLRKMQKM-GFKP 205
C +G +E+ E+ M ++ G KP
Sbjct: 435 ACAYSGLSEQGWEIFLSMSEVHGIKP 460
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/531 (38%), Positives = 308/531 (58%), Gaps = 12/531 (2%)
Query: 56 LAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSM 115
++++ M + V P+ T +LP+ L G+ H + G+ ++ FV ++L++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
Y+ C ++ A+ VFD +D +WN V+ AY + LF M V +W
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNV----ISW 162
Query: 176 NAVIGGCMENGQTEESLEMLRKMQ-----KMGFKPNEITISSILPACSILESLRMGKEVH 230
+ +I G + G+ +E+L++ R+MQ + +PNE T+S++L AC L +L GK VH
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVH 222
Query: 231 CYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMM-PKKDVVAWNTMIIANAMHGNG 288
Y ++ + D+ TAL+ MYAKC L ++ VF+ + KKDV A++ MI AM+G
Sbjct: 223 AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLT 282
Query: 289 KEALLLFENMLRS-GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYS 347
E LF M S + PNSVTF G+L C H L++EG F M + + P HY
Sbjct: 283 DECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYG 342
Query: 348 CMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPN 407
CMVD++ R+G + EA FI MP+EP WG+LL R+ +++ + A K+L +++P
Sbjct: 343 CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPM 402
Query: 408 NPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTG 467
N G YV L N+ W E IR M+ +GI K PGCS+++V VH FVVGD S
Sbjct: 403 NSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQE 462
Query: 468 SDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQS 527
S++IY LDE+ Q+++ AGY DT VL D+++++K +L HSEKLA+AF ++ +
Sbjct: 463 SERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGT 522
Query: 528 SIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+R+ KNLRICGDCH +K +S + I+VRD RFHHF++G+CSC+D W
Sbjct: 523 PVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 117/213 (54%), Gaps = 8/213 (3%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+ D+ N++++AY K I+ AR++FD++ R+V+SW+ L + YV CG ++ L +F E
Sbjct: 125 SKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFRE 184
Query: 62 MGWNG-----VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
M V+PN T+S++L AC L L GK +H + ++ + ++ + +AL+ MY
Sbjct: 185 MQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMY 244
Query: 117 ARCLSVKEARAVFD-LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM-SREGVKADKAT 174
A+C S++ A+ VF+ L +D +++ ++ ++ LFS M + + + + T
Sbjct: 245 AKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVT 304
Query: 175 WNAVIGGCMENGQTEESLEMLRKM-QKMGFKPN 206
+ ++G C+ G E + M ++ G P+
Sbjct: 305 FVGILGACVHRGLINEGKSYFKMMIEEFGITPS 337
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/580 (36%), Positives = 325/580 (56%), Gaps = 44/580 (7%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S+VF+ +AL+ Y K A+ V D + +DVV T+L Y G + + F M
Sbjct: 199 SNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSM 258
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
V+PN T +S+L +C LKD+ +GK IHG V+ G + ++L++MY RC V
Sbjct: 259 LVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLV 318
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++ VF + + + VSW ++I G
Sbjct: 319 DDSLRVFKCIEYPNQVSWT-----------------------------------SLISGL 343
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG--- 239
++NG+ E +L RKM + KPN T+SS L CS L G+++H G+ + G
Sbjct: 344 VQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIH--GIVTKYGFDR 401
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D + + L+ +Y KC +++R VFD + + DV++ NTMI + A +G G+EAL LFE M+
Sbjct: 402 DKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMI 461
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
G++PN VT VL C++SRLV+EG ++F+S +D ++ + +HY+CMVD+ RAGRL
Sbjct: 462 NLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRAGRL 520
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
+EA + + + P W LL AC+V + VE+A+ +K+ +IEP + G + + N+
Sbjct: 521 EEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLY 579
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDR-SNTGSDKIYEFLDEL 478
S W+ +++ MKD + K P SW+++ HTF+ GD S+ S++I E L+EL
Sbjct: 580 ASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEEL 639
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
+K K GY D V QD+++ K SL HSEKLA+AF + N SIR+ KNLR+C
Sbjct: 640 IKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSEKLAIAFAVWR-NVGGSIRILKNLRVC 698
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH+ IK +S V+ II RDS RFHHF++G+CSC D W
Sbjct: 699 VDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 144/338 (42%), Gaps = 42/338 (12%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
S +L C + + ++ K I ++ G + S LV +C + AR VFD M
Sbjct: 69 SQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMSE 127
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
R V+WN L AY +++ +++E++EM
Sbjct: 128 RHIVTWNS-LIAYL----------------------------------IKHRRSKEAVEM 152
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYG--LRHRIGDLSSTTALVYMYA 252
R M P+E T+SS+ A S L + + H L + ++ +ALV MY
Sbjct: 153 YRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYV 212
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
K ++ V D + +KDVV +I+ + G EA+ F++ML V+PN T+
Sbjct: 213 KFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYAS 272
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
VL C + + + G I M + A+ S ++ ++ R +D++ + + +
Sbjct: 273 VLISCGNLKDIGNGKLIHGLMVKSGFESALASQTS-LLTMYLRCSLVDDSLRVFKCIEY- 330
Query: 373 PTASAWGALLGACRVFKNVELAKIAAKKLF--DIEPNN 408
P +W +L+ E+A I +K+ I+PN+
Sbjct: 331 PNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNS 368
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/611 (35%), Positives = 332/611 (54%), Gaps = 36/611 (5%)
Query: 2 TSDVFLSNALIH-AYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
T F ++H A + ARR+ D + +L Y P +A+F
Sbjct: 35 TDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFV 94
Query: 61 EMGWNG-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G V P++ + + ++ A + L +G +H A++HG+ ++FV + L+ MY C
Sbjct: 95 EMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGC 154
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM---------------- 163
V+ AR VFD M + V+WN V+TA F + +F +M
Sbjct: 155 GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYI 214
Query: 164 -----------SREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
E D +W+ +I G NG ES R++Q+ G PNE++++
Sbjct: 215 KAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTG 274
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIGD---LSSTTALVYMYAKCSDLNLSRNVFD-MMP 268
+L ACS S GK +H G + G +S AL+ MY++C ++ ++R VF+ M
Sbjct: 275 VLSACSQSGSFEFGKILH--GFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
K+ +V+W +MI AMHG G+EA+ LF M GV P+ ++F +L CSH+ L++EG
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVF 388
F+ M R + +EP+ HY CMVD++ R+G+L +AY FI +MP+ PTA W LLGAC
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSH 452
Query: 389 KNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSW 448
N+ELA+ ++L +++PNN G+ V L N +A W + + IR M + I KT S
Sbjct: 453 GNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSL 512
Query: 449 LQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK-LAGYKPDTDYVLQDVDQEEKAESL 507
++VG ++ F G++ + +E L E+ ++K AGY P+ L DV++EEK + +
Sbjct: 513 VEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEEEEKEDQV 572
Query: 508 CNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHF 567
HSEKLA+AF + L+ ++IR+ KNLRIC DCH +K S V GV I+VRD RFH F
Sbjct: 573 SKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSF 632
Query: 568 KNGNCSCQDLW 578
K+G+CSC+D W
Sbjct: 633 KDGSCSCRDYW 643
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 323/580 (55%), Gaps = 55/580 (9%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPR-----QGLAIFHEMG 63
N+++H Y + ++ A ++F + G++V+SWT++ CGL + + L +F M
Sbjct: 163 NSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMI-----CGLDQNERSGEALDLFKNML 217
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+K + + ++ AC+ + G +HG ++ G + +V ++L++ YA C +
Sbjct: 218 RCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIG 277
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
++R VFD E V A W A++ G
Sbjct: 278 DSRKVFD-----------------------------------EKVHEQVAVWTALLSGYS 302
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---D 240
N + E++L + M + PN+ T +S L +CS L +L GKE+H G+ ++G D
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMH--GVAVKLGLETD 360
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+LV MY+ ++N + +VF + KK +V+WN++I+ A HG GK A ++F M+R
Sbjct: 361 AFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM--GRDHLVEPDANHYSCMVDVFSRAGR 358
+P+ +TFTG+LS CSH +++G ++F M G +H ++ HY+CMVD+ R G+
Sbjct: 421 LNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHYTCMVDILGRCGK 479
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L EA + I+RM ++P W ALL ACR+ +V+ + AA +F+++ + YV L NI
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNI 539
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
SA WS S++R+ MK GI K PG SW+ + + H F GD+ + +IYE L+ L
Sbjct: 540 YASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFL 597
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
+K+K GY PD L DV+ E+K E L HSE+LA+AFG++N S++ V KNLR+C
Sbjct: 598 REKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVC 657
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH IK +S VVG I++RD +RFHHFKNG CSC D W
Sbjct: 658 EDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 174/384 (45%), Gaps = 50/384 (13%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V L +I Y + + A +FD++ RDVVSW S+ S V CG + +F EM
Sbjct: 66 VSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP- 124
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ + V+ ++++ C SGK V +
Sbjct: 125 ---ERSVVSWTAMVNGC-----FRSGK------------------------------VDQ 146
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +F MP +D +WN ++ Y + + L LF +M + V +W +I G +
Sbjct: 147 AERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV----ISWTTMICGLDQ 202
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS- 243
N ++ E+L++ + M + K + ++ AC+ + MG +VH GL ++G L
Sbjct: 203 NERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVH--GLIIKLGFLYEE 260
Query: 244 --TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ +L+ YA C + SR VFD + V W ++ +++ ++AL +F MLR+
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
+ PN TF L+ CS +D G ++ + L E DA + +V ++S +G +++
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL-ETDAFVGNSLVVMYSDSGNVND 379
Query: 362 AYKFIQRMPLEPTASAWGALLGAC 385
A ++ + + +W +++ C
Sbjct: 380 AVSVFIKI-FKKSIVSWNSIIVGC 402
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 167/389 (42%), Gaps = 86/389 (22%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++S +LI Y CK I +R+VFD+ V V WT+L S Y L+IF M N
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+ PN T +S L +CS L L+ GK +HG AV+ G+ + FV ++LV MY+ +V +A
Sbjct: 321 SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDA 380
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+VF + + VSWN ++I GC ++
Sbjct: 381 VSVFIKIFKKSIVSWN-----------------------------------SIIVGCAQH 405
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY---GLRHRIGDLS 242
G+ + + + +M ++ +P+EIT + +L ACS L G+++ Y G+ H +
Sbjct: 406 GRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQ 465
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
T +V + +C L KEA L E M+
Sbjct: 466 HYTCMVDILGRCGKL-------------------------------KEAEELIERMV--- 491
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQ----IFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
VKPN + + +LS C VD G + IFN L + Y + ++++ AGR
Sbjct: 492 VKPNEMVWLALLSACRMHSDVDRGEKAAAAIFN------LDSKSSAAYVLLSNIYASAGR 545
Query: 359 LDEAYKFIQRMP----LEPTASAWGALLG 383
K +M ++ S+W + G
Sbjct: 546 WSNVSKLRVKMKKNGIMKKPGSSWVVIRG 574
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 106 VFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR 165
V +C+ L+S + EAR VF+ +P + ++T Y + L LF M
Sbjct: 40 VLICNHLLSR-----RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPV 94
Query: 166 EGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRM 225
D +WN++I GC+E G ++++ +M + ++ ++++ C R
Sbjct: 95 R----DVVSWNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGC-----FRS 141
Query: 226 GKEVHCYGLRHR--IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANA 283
GK L ++ + D ++ ++V+ Y + ++ + +F MP K+V++W TMI
Sbjct: 142 GKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLD 201
Query: 284 MHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDA 343
+ EAL LF+NMLR +K S FT V++ C+++ G+Q+ + + + +
Sbjct: 202 QNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 344 NHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELA 394
S ++ ++ R+ ++ K E A W ALL + K E A
Sbjct: 262 VSAS-LITFYANCKRIGDSRKVFDEKVHEQVA-VWTALLSGYSLNKKHEDA 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +D F+ N+L+ Y + A VF + + +VSW S+ G + IF
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGF---AVRHGMVENVFVCSALVSMYA 117
+M +P+ +T + +L ACS L G+ + + + H + + + +V +
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH-IDRKIQHYTCMVDILG 475
Query: 118 RCLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKG 156
RC +KEA + + M + + + W +L+A + + ++G
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRG 515
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 216/616 (35%), Positives = 337/616 (54%), Gaps = 53/616 (8%)
Query: 9 NALIHAY---GKCKCIEGARRVFDDL-VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
N LI Y GKC + + + DV +WT++ S ++ G+ Q L +F +M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GV PNAVT+ S + ACS LK +N G +H AV+ G +++V V ++LV MY++C +++
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 125 ARAVFDLMPHRDAVSWNGVLTAY----FTNKEYE-------------------------- 154
AR VFD + ++D +WN ++T Y + K YE
Sbjct: 406 ARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIK 465
Query: 155 -----KGLALFSRMSREG-VKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
+ + LF RM ++G V+ + ATWN +I G ++NG+ +E+LE+ RKMQ F PN +
Sbjct: 466 NGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSV 525
Query: 209 TISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNLSRNVFDMM 267
TI S+LPAC+ L +M +E+H LR + + + AL YAK D+ SR +F M
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 268 PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL 327
KD++ WN++I +HG+ AL LF M G+ PN T + ++ VDEG
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 328 QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRV 387
++F S+ D+ + P H S MV ++ RA RL+EA +FIQ M ++ W + L CR+
Sbjct: 646 KVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRI 705
Query: 388 FKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL-VSAKLWS--EASQIRILMKDRGITKTP 444
++++A AA+ LF +EP N + I + AKL E ++ R +D + K
Sbjct: 706 HGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPL 762
Query: 445 GCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKA 504
G SW++V N +HTF GD+S +D +Y + +KM + D +++E +
Sbjct: 763 GQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV----EKMSRLDNRSDQYNGELWIEEEGRE 818
Query: 505 ESLCNHSEKLAVAFGILNLNGQS--SIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSL 562
E+ HSEK A+AFG+++ +G S +IR+ KNLR+C DCH+ KY+S G I++ D+
Sbjct: 819 ETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTR 878
Query: 563 RFHHFKNGNCSCQDLW 578
HHFKNG+CSC+D W
Sbjct: 879 CLHHFKNGDCSCKDYW 894
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 206/421 (48%), Gaps = 39/421 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DVF+ L+ Y KC CI AR+VFD + R++ +W+++ Y R+ +F M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+GV P+ IL C+ D+ +GK IH ++ GM + V ++++++YA+C +
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVK-------------- 169
A F M RD ++WN VL AY N ++E+ + L M +EG+
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYN 293
Query: 170 ---------------------ADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
AD TW A+I G + NG ++L+M RKM G PN +
Sbjct: 294 QLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAV 353
Query: 209 TISSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMM 267
TI S + ACS L+ + G EVH ++ I D+ +LV MY+KC L +R VFD +
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 268 PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL 327
KDV WN+MI G +A LF M + ++PN +T+ ++SG + E +
Sbjct: 414 KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAM 473
Query: 328 QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE---PTASAWGALLGA 384
+F M +D V+ + ++ ++ + + G+ DEA + ++M P + +LL A
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 385 C 385
C
Sbjct: 534 C 534
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC-YGLRHRIGDLSS 243
NG E+ + L + + G K T +L +C S+ +G+ +H +GL D+
Sbjct: 59 NGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE-PDVFV 117
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
T L+ MYAKC + +R VFD M ++++ W+ MI A + +E LF M++ GV
Sbjct: 118 ETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGV 177
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM------VDVFSRAG 357
P+ F +L GC++ V+ G I H V SC+ + V+++ G
Sbjct: 178 LPDDFLFPKILQGCANCGDVEAGKVI-------HSVVIKLGMSSCLRVSNSILAVYAKCG 230
Query: 358 RLDEAYKFIQRMPLEPTASAWGA-LLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
LD A KF +RM E AW + LL C+ K+ E ++ K + E +PG + +
Sbjct: 231 ELDFATKFFRRMR-ERDVIAWNSVLLAYCQNGKHEEAVELV--KEMEKEGISPG--LVTW 285
Query: 417 NILVSA--KLWSEASQIRIL--MKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIY 472
NIL+ +L + + ++ M+ GIT + +H G R Y
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHN---GMR--------Y 334
Query: 473 EFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSE--KLAVAFGILN--LNGQSS 528
+ LD + +KM LAG P+ ++ V + + SE +AV G ++ L G S
Sbjct: 335 QALD-MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 529 IRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNC 572
+ ++ CG +A K +V + +S+ + + G C
Sbjct: 394 VDMYSK---CGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYC 434
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 171/433 (39%), Gaps = 94/433 (21%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M+S + +SN+++ Y KC ++ A + F + RDV++W S+ Y G + + +
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS------ 114
EM G+ P VT + ++ ++L ++ + G+ +VF +A++S
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 115 MYARCLSVKEARAVFDLMPHR---------------------------------DAVSWN 141
M + L + + ++P+ D + N
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 142 GVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM 201
++ Y + E +F + + D TWN++I G + G ++ E+ +MQ
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDA 447
Query: 202 GFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSR 261
+PN IT ++++ Y K D +
Sbjct: 448 NLRPNIITWNTMISG----------------------------------YIKNGDEGEAM 473
Query: 262 NVFDMMPK-----KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
++F M K ++ WN +I +G EAL LF M S PNSVT +L
Sbjct: 474 DLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPA 533
Query: 317 CSH---SRLVDEGLQIFNSMGRDHLVEPDANH--YSCMVDVFSRAGRLDEAYKFIQRMPL 371
C++ +++V E I + R +L DA H + + D ++++G ++ + M
Sbjct: 534 CANLLGAKMVRE---IHGCVLRRNL---DAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 372 EPTASAWGALLGA 384
+ + W +L+G
Sbjct: 588 KDIIT-WNSLIGG 599
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+ NAL Y K IE +R +F + +D+++W SL YV G LA+F++M G
Sbjct: 561 VKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG 620
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+ PN T+SSI+ A + +++ GK + + A + ++ + CSA+V +Y R ++EA
Sbjct: 621 ITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEA 680
Query: 126 -RAVFDLMPHRDAVSWNGVLTA 146
+ + ++ + W LT
Sbjct: 681 LQFIQEMNIQSETPIWESFLTG 702
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 373 bits (958), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/558 (36%), Positives = 310/558 (55%), Gaps = 38/558 (6%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
AR+VFD++ + W +L YV LP + L ++ +M GV+P+ T ++ A S+
Sbjct: 62 ARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQ 121
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
L D + G A+H V++G V + LV MY + + A +F+ M +D V+W
Sbjct: 122 LGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAW--- 178
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
NA + C++ G + +LE KM
Sbjct: 179 --------------------------------NAFLAVCVQTGNSAIALEYFNKMCADAV 206
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRN 262
+ + T+ S+L AC L SL +G+E++ + I ++ A + M+ KC + +R
Sbjct: 207 QFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARV 266
Query: 263 VFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
+F+ M +++VV+W+TMI+ AM+G+ +EAL LF M G++PN VTF GVLS CSH+ L
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 323 VDEGLQIFNSM--GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGA 380
V+EG + F+ M D +EP HY+CMVD+ R+G L+EAY+FI++MP+EP WGA
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGA 386
Query: 381 LLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
LLGAC V +++ L + A L + P+ +V L NI +A W ++R M+ G
Sbjct: 387 LLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGT 446
Query: 441 TKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQ 500
K S ++ ++H F GD+S+ S IYE LDE+ +K++ GY PDT V DV+
Sbjct: 447 KKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEM 506
Query: 501 EEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRD 560
EEK SL +HSEKLA+AFG++ IRV KNLR C DCH K++S++ II+RD
Sbjct: 507 EEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRD 566
Query: 561 SLRFHHFKNGNCSCQDLW 578
RFHHF+NG CSC++ W
Sbjct: 567 KNRFHHFRNGVCSCKEFW 584
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 96/184 (52%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
++ L+ Y K + A +F+ + +D+V+W + + V G L F++M +
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADA 205
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
V+ ++ TV S+L AC +L L G+ I+ A + + N+ V +A + M+ +C + + AR
Sbjct: 206 VQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAAR 265
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
+F+ M R+ VSW+ ++ Y N + + L LF+ M EG++ + T+ V+ C G
Sbjct: 266 VLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAG 325
Query: 187 QTEE 190
E
Sbjct: 326 LVNE 329
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ + NA + + KC E AR +F+++ R+VVSW+++ Y G R+ L +F M
Sbjct: 244 NIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG-----MVENVFVCSALVSMYAR 118
G++PN VT +L ACS +N GK V+ + + C +V + R
Sbjct: 304 NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYAC--MVDLLGR 361
Query: 119 CLSVKEARAVFDLMP-HRDAVSWNGVLTA 146
++EA MP D W +L A
Sbjct: 362 SGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/645 (34%), Positives = 326/645 (50%), Gaps = 72/645 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D + N+LI+ Y KC+ AR++FD + R+VVSW ++ Y N G + L +F M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 64 WNG-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
++G +PN + + +CS + GK HG +++G++ + FV + LV MY+ C
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAY----------------------FTNKEYEKGLALF 160
EA V D +P+ D ++ L+ Y + N Y L LF
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLF 247
Query: 161 S-------------RMSREGVKADKATWNAVI---GGC---------------------- 182
S RM R G A+ A+I G C
Sbjct: 248 SNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNT 307
Query: 183 ------MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
++ EE+L + KM PNE T + +L + + L L+ G +H GL
Sbjct: 308 TIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLH--GLVL 365
Query: 237 RIGDLSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALL 293
+ G + ALV MYAK + +R F M +D+V WNTMI + HG G+EAL
Sbjct: 366 KSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALE 425
Query: 294 LFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
F+ M+ +G PN +TF GVL CSH V++GL FN + + V+PD HY+C+V +
Sbjct: 426 AFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Query: 354 SRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYV 413
S+AG +A F++ P+E AW LL AC V +N L K A+ + PN+ G YV
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYV 545
Query: 414 SLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYE 473
L NI ++ W +++R LM +RG+ K PG SW+ + N+ H F+ D + IY
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYA 605
Query: 474 FLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFK 533
+ E+ K+K GY PD DVD+E++ ++L HSEKLAVA+G++ +S + V K
Sbjct: 606 KVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTK 665
Query: 534 NLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
N+RIC DCH+AIK +S + I++RDS RFHHF +G CSC D W
Sbjct: 666 NVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 154/387 (39%), Gaps = 81/387 (20%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAV---RHGMVENVFVCSALVSMYARCLSVKEARAVFD 130
++ +L C+ L G++IH + + E+ + ++L+++Y +C AR +FD
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 131 LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAVIGGCMENGQTE 189
LMP R+ VSW ++ Y + + L LF M G + ++ V C +G+ E
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 190 ESLEMLRKMQKMGFKPNEITISSI-------------------LPACSI----------- 219
E + K G +E +++ LP C +
Sbjct: 154 EGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYL 213
Query: 220 ---------------------------LESLR---------MGKEVHCYGLRHRI-GDLS 242
L SLR + +VH +R ++
Sbjct: 214 ECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVE 273
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+ AL+ MY KC + ++ VFD +++ T++ A + +EAL LF M
Sbjct: 274 ACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKE 333
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGL----QIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
V PN TF +L+ + L+ +G + S R+H++ +A +V++++++G
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNA-----LVNMYAKSGS 388
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGAC 385
+++A K M + W ++ C
Sbjct: 389 IEDARKAFSGMTFRDIVT-WNTMISGC 414
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/580 (34%), Positives = 311/580 (53%), Gaps = 37/580 (6%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D + N ++ Y K + R +FD++ D VS+ + S Y L F
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM G +++L + L L G+ +H A+ + V ++LV MYA+C
Sbjct: 341 EMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCE 400
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+EA +F +P R VSW A+I
Sbjct: 401 MFEEAELIFKSLPQRTTVSWT-----------------------------------ALIS 425
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIG 239
G ++ G L++ KM+ + ++ T +++L A + SL +GK++H + +R +
Sbjct: 426 GYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE 485
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
++ S + LV MYAKC + + VF+ MP ++ V+WN +I A+A +G+G+ A+ F M+
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMI 545
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
SG++P+SV+ GVL+ CSH V++G + F +M + + P HY+CM+D+ R GR
Sbjct: 546 ESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRF 605
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEP-NNPGNYVSLFNI 418
EA K + MP EP W ++L ACR+ KN LA+ AA+KLF +E + YVS+ NI
Sbjct: 606 AEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNI 665
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
+A W + ++ M++RGI K P SW++V +++H F D+++ D+I ++EL
Sbjct: 666 YAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINEL 725
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
+++ GYKPDT V+QDVD++ K ESL HSE+LAVAF +++ I V KNLR C
Sbjct: 726 TAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRAC 785
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH AIK +S +V I VRD+ RFHHF G CSC D W
Sbjct: 786 RDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 195/419 (46%), Gaps = 46/419 (10%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+SN L+ +Y + + ++ A +F+++ +D V++ +L + Y GL + + +F +M +G
Sbjct: 186 VSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
+P+ T S +L A L D G+ +H +V G + V + ++ Y++ V E R
Sbjct: 246 HQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETR 305
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
+FD MP D VS+N V+++Y +YE L F
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFF-------------------------- 339
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTT 245
R+MQ MGF +++L + L SL+MG+++HC L L
Sbjct: 340 ---------REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGN 390
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMI---IANAMHGNGKEALLLFENMLRSG 302
+LV MYAKC + +F +P++ V+W +I + +HG G L LF M S
Sbjct: 391 SLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSN 447
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
++ + TF VL + + G Q+ + R +E + S +VD++++ G + +A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSIKDA 506
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
+ + MP + A +W AL+ A + E A A K+ IE + VS+ +L +
Sbjct: 507 VQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKM--IESGLQPDSVSILGVLTA 562
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 121/255 (47%), Gaps = 12/255 (4%)
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
V AR V+D MPH++ VS N +++ + + LF M V TW ++G
Sbjct: 64 VSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTV----VTWTILMGW 119
Query: 182 CMENGQTEESLEMLRKMQKMG--FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
N +E+ ++ R+M + P+ +T +++LP C+ +VH + ++
Sbjct: 120 YARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFD 179
Query: 240 D---LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
L+ + L+ Y + L+L+ +F+ +P+KD V +NT+I G E++ LF
Sbjct: 180 TNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFL 239
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL-QIFNSMGRDHLVEPDANHYSCMVDVFSR 355
M +SG +P+ TF+GVL L D L Q +++ DA+ + ++D +S+
Sbjct: 240 KMRQSGHQPSDFTFSGVLKAVVG--LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 356 AGRLDEAYKFIQRMP 370
R+ E MP
Sbjct: 298 HDRVLETRMLFDEMP 312
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/555 (36%), Positives = 312/555 (56%), Gaps = 47/555 (8%)
Query: 29 DDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLN 88
DD + V+ TS LP +A + M + V P+ T +S++ +C++L L
Sbjct: 71 DDFLFNSVIKSTS------KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALR 124
Query: 89 SGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYF 148
GK +H AV G + +V +ALV+ Y++C ++ AR VFD MP + V+
Sbjct: 125 IGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVA--------- 175
Query: 149 TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
WN+++ G +NG +E++++ +M++ GF+P+
Sbjct: 176 --------------------------WNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSA 209
Query: 209 TISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMM 267
T S+L AC+ ++ +G VH Y + + ++ TAL+ +Y++C D+ +R VFD M
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 268 PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS-GVKPNSVTFTGVLSGCSHSRLVDEG 326
+ +V AW MI A HG G++A+ LF M G PN+VTF VLS C+H+ LV+EG
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 327 LQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASA---WGALLG 383
++ M + + + P H+ CMVD+ RAG LDEAYKFI ++ A+A W A+LG
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLG 389
Query: 384 ACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKT 443
AC++ +N +L AK+L +EP+NPG++V L NI + E S IR M + K
Sbjct: 390 ACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQ 449
Query: 444 PGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEK 503
G S ++V N+ + F +GD S+ + +IY +L+ L + K GY P ++ V+ V++EEK
Sbjct: 450 VGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQVEEEEK 509
Query: 504 AESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLR 563
+L HSEKLAVAFG+L +I + KNLRIC DCH+A KY+S V I VRD LR
Sbjct: 510 EFALRYHSEKLAVAFGLLK-TVDVAITIVKNLRICEDCHSAFKYISIVSNRQITVRDKLR 568
Query: 564 FHHFKNGNCSCQDLW 578
FHHF+NG+CSC D W
Sbjct: 569 FHHFQNGSCSCLDYW 583
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 116/198 (58%), Gaps = 1/198 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D ++ AL+ Y KC +EGAR+VFD + + +V+W SL S + GL + + +F++M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G +P++ T S+L AC++ ++ G +H + + G+ NV + +AL+++Y+RC V
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE-GVKADKATWNAVIGGC 182
+AR VFD M + +W +++AY T+ ++ + LF++M + G + T+ AV+ C
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC 320
Query: 183 MENGQTEESLEMLRKMQK 200
G EE + ++M K
Sbjct: 321 AHAGLVEEGRSVYKRMTK 338
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/500 (37%), Positives = 292/500 (58%), Gaps = 17/500 (3%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDV++ +AL+ Y KC + A+RVFD++ R+VVSW SL +C+ G + L +F M
Sbjct: 185 SDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMM 244
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVEN-VFVCSALVSMYARCLS 121
+ V+P+ VT++S++ AC+ L + G+ +HG V++ + N + + +A V MYA+C
Sbjct: 245 LESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSR 304
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+KEAR +FD MP R+ ++ +++ Y + +F++M+ V +WNA+I G
Sbjct: 305 IKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV----VSWNALIAG 360
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--- 238
+NG+ EE+L + +++ P + ++IL AC+ L L +G + H + L+H
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQ 420
Query: 239 ----GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
D+ +L+ MY KC + VF M ++D V+WN MII A +G G EAL L
Sbjct: 421 SGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALEL 480
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F ML SG KP+ +T GVLS C H+ V+EG F+SM RD V P +HY+CMVD+
Sbjct: 481 FREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLG 540
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
RAG L+EA I+ MP++P + WG+LL AC+V +N+ L K A+KL ++EP+N G YV
Sbjct: 541 RAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVL 600
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEF 474
L N+ W + +R M+ G+TK PGCSW+++ H F+V D+S+ +I+
Sbjct: 601 LSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPRKKQIHSL 660
Query: 475 LDELGQKMKLAGYKPDTDYV 494
LD L +A +P+ D+
Sbjct: 661 LDIL-----IAEMRPEQDHT 675
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 153/282 (54%), Gaps = 5/282 (1%)
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
+ +H ++ G +F+ + L+ Y++C S+++ R VFD MP R+ +WN V+T
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
++ +LF M D+ TWN+++ G ++ + EE+L M K GF NE +
Sbjct: 100 GFLDEADSLFRSMPER----DQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSF 155
Query: 211 SSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
+S+L ACS L + G +VH + + D+ +ALV MY+KC ++N ++ VFD M
Sbjct: 156 ASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGD 215
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
++VV+WN++I +G EAL +F+ ML S V+P+ VT V+S C+ + G ++
Sbjct: 216 RNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEV 275
Query: 330 FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
+ ++ + D + VD++++ R+ EA MP+
Sbjct: 276 HGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPI 317
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 199/456 (43%), Gaps = 117/456 (25%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
++++F+ N LI AY KC +E R+VFD + R++ +W S+ + G + ++F
Sbjct: 52 SNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRS 111
Query: 62 M------GWN-------------------------GVKPNAVTVSSILPACSELKDLNSG 90
M WN G N + +S+L ACS L D+N G
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
+H + + +V++ SALV MY++C +V +A+ VFD M R+ VSWN ++T + N
Sbjct: 172 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
+ L +F M V+ D+ T +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVT-----------------------------------L 256
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRI--GDLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+S++ AC+ L ++++G+EVH +++ D+ + A V MYAKCS + +R +FD MP
Sbjct: 257 ASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMP 316
Query: 269 -------------------------------KKDVVAWNTMIIANAMHGNGKEALLLFEN 297
+++VV+WN +I +G +EAL LF
Sbjct: 317 IRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 298 MLRSGVKPNSVTFTGVLSGC-----------SHSRLVDEGLQIFNSMGRDHLVEPDANHY 346
+ R V P +F +L C +H ++ G + F S D + ++
Sbjct: 377 LKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK-FQSGEEDDIFVGNS--- 432
Query: 347 SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
++D++ + G ++E Y ++M +E +W A++
Sbjct: 433 --LIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMI 465
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 138/343 (40%), Gaps = 70/343 (20%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDD------------------------------ 30
+ +D+ LSNA + Y KC I+ AR +FD
Sbjct: 285 LRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFT 344
Query: 31 -LVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNS 89
+ R+VVSW +L + Y G + L++F + V P + ++IL AC++L +L+
Sbjct: 345 KMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHL 404
Query: 90 GKAI------HGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
G HGF + G +++FV ++L+ MY +C V+E VF M RD VSWN +
Sbjct: 405 GMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAM 464
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES------------ 191
+ + N + L LF M G K D T V+ C G EE
Sbjct: 465 IIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFG 524
Query: 192 --------------------LEMLRKM-QKMGFKPNEITISSILPACSILESLRMGKEVH 230
LE + M ++M +P+ + S+L AC + ++ +GK V
Sbjct: 525 VAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVA 584
Query: 231 CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV 273
L + L MYA+ NV M K+ V
Sbjct: 585 EKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVT 627
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 218/594 (36%), Positives = 323/594 (54%), Gaps = 53/594 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
SD F N L+ +Y K K I AR++FD++ +VVSWTS+ S Y + G P+ L++F
Sbjct: 60 FASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQ 119
Query: 61 EMGWN-GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M + V PN T +S+ ACS L + GK IH G+ N+ V S+LV MY +C
Sbjct: 120 KMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKC 179
Query: 120 LSVKEARAVFDLMPH--RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
V+ AR VFD M R+ VSW ++TAY
Sbjct: 180 NDVETARRVFDSMIGYGRNVVSWTSMITAY------------------------------ 209
Query: 178 VIGGCMENGQTEESLEMLRKMQK--MGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
+N + E++E+ R + N+ ++S++ ACS L L+ GK H GL
Sbjct: 210 -----AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH--GLV 262
Query: 236 HRIGDLSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
R G S+T T+L+ MYAKC L+ + +F + V+++ +MI+A A HG G+ A+
Sbjct: 263 TRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAV 322
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
LF+ M+ + PN VT GVL CSHS LV+EGL+ + M + V PD+ HY+C+VD+
Sbjct: 323 KLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDM 382
Query: 353 FSRAGRLDEAYKFIQRMPL--EPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPG 410
R GR+DEAY+ + + + E A WGALL A R+ VE+ A+K+L
Sbjct: 383 LGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTS 442
Query: 411 NYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDK 470
Y++L N + W ++ +R+ MK G K CSW++ + V+ F GD S S +
Sbjct: 443 AYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDESGE 502
Query: 471 IYEFLDELGQKMKLAGYK------PDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLN 524
I FL +L ++MK G++ + V DVD+E K E + H E+LA+A+G+L+L
Sbjct: 503 IERFLKDLEKRMKERGHRGSSSMITTSSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLP 562
Query: 525 GQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
S+IR+ NLR+C DCH A K +S +V I+VRD RFH FKNG+C+C+D W
Sbjct: 563 AGSTIRIMNNLRMCRDCHEAFKLISEIVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 143/341 (41%), Gaps = 61/341 (17%)
Query: 93 IHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKE 152
+H ++ G + F + LV Y + + AR +FD M + VSW V++ Y +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 153 YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ L++F +M + PNE T +S
Sbjct: 111 PQNALSMFQKMH----------------------------------EDRPVPPNEYTFAS 136
Query: 213 ILPACSILESLRMGKEVHCY----GLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+ ACS L R+GK +H GLR I +++LV MY KC+D+ +R VFD M
Sbjct: 137 VFKACSALAESRIGKNIHARLEISGLRRNI---VVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 269 --KKDVVAWNTMIIANAMHGNGKEALLLFE--NMLRSGVKPNSVTFTGVLSGCSHSRLVD 324
++VV+W +MI A A + G EA+ LF N + + N V+S CS +
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
G ++ + + E + + ++D++++ G L A K R+ S ++
Sbjct: 254 WG-KVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAK 312
Query: 385 CRVFKNVELAKIAAKKLFD------IEPNNPGNYVSLFNIL 419
+ AA KLFD I P NYV+L +L
Sbjct: 313 AK-----HGLGEAAVKLFDEMVAGRINP----NYVTLLGVL 344
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/583 (33%), Positives = 317/583 (54%), Gaps = 48/583 (8%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
T DV + +++ Y K + A R+F+ ++ R++V+W + CY G F +
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 62 MG-WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M NG++P+ +T ++LPA + L+ G+ IHG+A+R G + ++ + +AL+ MY C
Sbjct: 324 MSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+K A +FD M ++ +SWN ++ AY N
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQN------------------------------ 409
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-G 239
G+ +LE+ +++ P+ TI+SILPA + SL G+E+H Y ++ R
Sbjct: 410 -----GKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ +LV+MYA C DL +R F+ + KDVV+WN++I+A A+HG G+ ++ LF M+
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
S V PN TF +L+ CS S +VDEG + F SM R++ ++P HY CM+D+ R G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
A +F++ MP PTA WG+LL A R K++ +A+ AA+++F +E +N G YV L N+
Sbjct: 585 SAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMY 644
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
A W + ++I++LM+ +GI++T S ++ + H F GDRS+ ++KIYE LD +
Sbjct: 645 AEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
Query: 480 QKMKLAGYKPDTDYVLQDVDQEEKAESLCN----HSEKLAVAFGILNLNGQSSIRVFKNL 535
++ G + + + + E +S N HS +LA FG+++ + V N
Sbjct: 705 ---RMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNT 761
Query: 536 RICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
RIC CH ++ S + I+V DS FHHF NG CSC + W
Sbjct: 762 RICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 47/386 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+D L+ AL + + +E A ++FD++ D W + + +CGL + + + M
Sbjct: 63 NDPALTRAL-RGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM 121
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ GVK + T ++ + + + L GK IH ++ G V +V+VC++L+S+Y +
Sbjct: 122 VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCA 181
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+A VF+ MP RD VSWN +++ Y + L LF M + G K D+
Sbjct: 182 WDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDR---------- 231
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--GD 240
+ S L ACS + S +MGKE+HC+ +R RI GD
Sbjct: 232 -------------------------FSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGD 266
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML- 299
+ T+++ MY+K +++ + +F+ M ++++VAWN MI A +G +A L F+ M
Sbjct: 267 VMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSE 326
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN-SMGRDHLVEPDANHYSCMVDVFSRAGR 358
++G++P+ +T +L + + EG I +M R L P + ++D++ G+
Sbjct: 327 QNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFL--PHMVLETALIDMYGECGQ 380
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGA 384
L A RM E +W +++ A
Sbjct: 381 LKSAEVIFDRMA-EKNVISWNSIIAA 405
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 186/395 (47%), Gaps = 54/395 (13%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
SDV++ N+LI Y K C A +VF+++ RD+VSW S+ S Y+ G L +F
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARC 119
EM G KP+ + S L ACS + GK IH AVR + +V V ++++ MY++
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
V A +F+ M R+ V+WN ++ Y N F +MS +
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQN------------ 328
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-I 238
G +P+ IT ++LPA +ILE G+ +H Y +R +
Sbjct: 329 ----------------------GLQPDVITSINLLPASAILE----GRTIHGYAMRRGFL 362
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ TAL+ MY +C L + +FD M +K+V++WN++I A +G AL LF+ +
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYS------CMVDV 352
S + P+S T +L + S + EG +I H + ++S +V +
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGREI-------HAYIVKSRYWSNTIILNSLVHM 475
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRV 387
++ G L++A K + L+ S W +++ A V
Sbjct: 476 YAMCGDLEDARKCFNHILLKDVVS-WNSIIMAYAV 509
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 220/584 (37%), Positives = 315/584 (53%), Gaps = 46/584 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNC--GLPRQGLAIFHE 61
+V +SNAL+ Y + + R++F + D VSW S+ LP + + F
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP-EAVVCFLN 507
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
G K N +T SS+L A S L GK IHG A+++ + + +AL++ Y +C
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 567
Query: 122 VKEARAVFDLMPH-RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ +F M RD V+WN +++ Y N+ K L L M + G + D +
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMY----- 622
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-G 239
+++L A + + +L G EVH +R +
Sbjct: 623 ------------------------------ATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ +ALV MY+KC L+ + F+ MP ++ +WN+MI A HG G+EAL LFE M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 300 RSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
G P+ VTF GVLS CSH+ L++EG + F SM + + P H+SCM DV RAG
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGAC--RVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
LD+ FI++MP++P W +LGAC + EL K AA+ LF +EP N NYV L
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
N+ + W + + R MKD + K G SW+ + + VH FV GD+S+ +D IY+ L
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLK 892
Query: 477 ELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSS--IRVFKN 534
EL +KM+ AGY P T + L D++QE K E L HSEKLAVAF +L S+ IR+ KN
Sbjct: 893 ELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAF-VLAAQRSSTLPIRIMKN 951
Query: 535 LRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
LR+CGDCH+A KY+S + G II+RDS RFHHF++G CSC D W
Sbjct: 952 LRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 207/421 (49%), Gaps = 47/421 (11%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V + N L++ Y KC I ARRVF + +D VSW S+ + G + + + M
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ + P + T+ S L +C+ LK G+ IHG +++ G+ NV V +AL+++YA + E
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 468
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
R +F MP D VSWN ++ A +++++ AV+ C
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGAL--------------------ARSERSLPEAVV--CFL 506
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST 244
N Q+ G K N IT SS+L A S L +GK++H L++ I D ++T
Sbjct: 507 NA------------QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 245 -TALVYMYAKCSDLNLSRNVFD-MMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
AL+ Y KC +++ +F M ++D V WN+MI + +AL L ML++G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ +S + VLS + ++ G+++ R L E D S +VD++S+ GRLD A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACL-ESDVVVGSALVDMYSKCGRLDYA 673
Query: 363 YKFIQRMPLEPTASAWGALL-GACRVFKNVELAKIAAKKLFD---IEPNNPGNYVSLFNI 418
+F MP+ + S W +++ G R + E A KLF+ ++ P ++V+ +
Sbjct: 674 LRFFNTMPVRNSYS-WNSMISGYARHGQGEE-----ALKLFETMKLDGQTPPDHVTFVGV 727
Query: 419 L 419
L
Sbjct: 728 L 728
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 187/389 (48%), Gaps = 43/389 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +D+F+ + L+ A+ K + AR+VF+ + R+ V+ L V + +F
Sbjct: 239 LLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFM 298
Query: 61 EM-GWNGVKPNA-VTVSSILP--ACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSM 115
+M V P + V + S P + +E L G+ +HG + G+V+ V + + LV+M
Sbjct: 299 DMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNM 358
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
YA+C S+ +AR VF M +D+VSWN ++T
Sbjct: 359 YAKCGSIADARRVFYFMTDKDSVSWNSMIT------------------------------ 388
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
G +NG E++E + M++ P T+ S L +C+ L+ ++G+++H L+
Sbjct: 389 -----GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 236 HRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG-KEALL 293
I ++S + AL+ +YA+ LN R +F MP+ D V+WN++I A A EA++
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVV 503
Query: 294 LFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
F N R+G K N +TF+ VLS S + G QI ++++ + +A + ++ +
Sbjct: 504 CFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIAD-EATTENALIACY 562
Query: 354 SRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+ G +D K RM W +++
Sbjct: 563 GKCGEMDGCEKIFSRMAERRDNVTWNSMI 591
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 48/393 (12%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ DV+L N LI+AY + AR+VFD++ R+ VSW + S Y G ++ L
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLN--SGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+M G+ N S+L AC E+ + G+ IHG + + V + L+SMY +
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 119 CL-SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
C+ SV A F + +++VSWN +++ Y + +FS M
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSM-------------- 197
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL-PACSILE-SLRMGKEVHCYGLR 235
Q G +P E T S++ ACS+ E +R+ +++ C +
Sbjct: 198 ---------------------QYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 236 H-RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
+ DL + LV +AK L+ +R VF+ M ++ V N +++ G+EA L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDE-----GLQIFNSMGRDHLVEPDANHYSCM 349
F +M S + + ++ +LS L +E G ++ + LV+ + +
Sbjct: 297 FMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 350 VDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
V+++++ G + +A + M + + S W +++
Sbjct: 356 VNMYAKCGSIADARRVFYFMTDKDSVS-WNSMI 387
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 50/331 (15%)
Query: 89 SGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYF 148
+ + H ++ + ++V++C+ L++ Y AR VFD MP R+ VSW +++ Y
Sbjct: 19 AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYS 78
Query: 149 TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
N E+++ L M +EG+ +++ + +V+ C E G
Sbjct: 79 RNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV-------------------- 118
Query: 209 TISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKC-SDLNLSRNVF 264
+ G+++H GL ++ D + L+ MY KC + + F
Sbjct: 119 -------------GILFGRQIH--GLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAF 163
Query: 265 DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG-VLSGCSHS--- 320
+ K+ V+WN++I + G+ + A +F +M G +P TF V + CS +
Sbjct: 164 GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPD 223
Query: 321 -RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWG 379
RL++ QI ++ + L+ D S +V F+++G L A K +M + G
Sbjct: 224 VRLLE---QIMCTIQKSGLL-TDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG 279
Query: 380 ALLGACRVFKNVELAKI--AAKKLFDIEPNN 408
++G R E K+ + D+ P +
Sbjct: 280 LMVGLVRQKWGEEATKLFMDMNSMIDVSPES 310
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SDV + +AL+ Y KC ++ A R F+ + R+ SW S+ S Y G + L +F
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 61 EMGWNG-VKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYAR 118
M +G P+ VT +L ACS L G K + +G+ + S + + R
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 119 CLSVKEARAVFDLMPHR-DAVSWNGVLTA 146
+ + + MP + + + W VL A
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLIWRTVLGA 798
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/580 (33%), Positives = 315/580 (54%), Gaps = 47/580 (8%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+ NAL+ YGK + +RRV + RDVV+W +L Y P + LA F M
Sbjct: 398 IIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE 457
Query: 66 GVKPNAVTVSSILPACSELKDL-NSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GV N +TV S+L AC DL GK +H + V G + V ++L++MYA+C +
Sbjct: 458 GVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSS 517
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
++ +F+ + +R+ + TWNA++
Sbjct: 518 SQDLFNGLDNRNII-----------------------------------TWNAMLAANAH 542
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DL 241
+G EE L+++ KM+ G ++ + S L A + L L G+++H GL ++G D
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH--GLAVKLGFEHDS 600
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMP---KKDVVAWNTMIIANAMHGNGKEALLLFENM 298
A MY+KC ++ V M+P + + +WN +I A HG +E F M
Sbjct: 601 FIFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEM 657
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L G+KP VTF +L+ CSH LVD+GL ++ + RD +EP H C++D+ R+GR
Sbjct: 658 LEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGR 717
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L EA FI +MP++P W +LL +C++ N++ + AA+ L +EP + YV N+
Sbjct: 718 LAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNM 777
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
+ W + +R M + I K CSW+++ ++V +F +GDR++ + +IY L+++
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
+ +K +GY DT LQD D+E+K +L NHSE+LA+A+ +++ S++R+FKNLRIC
Sbjct: 838 KKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRIC 897
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCH+ K++S V+G I++RD RFHHF+ G CSC+D W
Sbjct: 898 SDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 186/388 (47%), Gaps = 47/388 (12%)
Query: 3 SDVFLSNALIHAY-GKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
S V + N L+ Y G + +E A VF + +D++SW SL + +VN G L +
Sbjct: 294 SVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M +G N VT +S L AC G+ +HG V G+ N + +ALVSMY +
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ E+R V MP RD V+WN ++ Y +++ +K LA F M EGV +
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS----------- 461
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL-ESLRMGKEVHCYGLRHRI-G 239
N IT+ S+L AC + + L GK +H Y +
Sbjct: 462 ------------------------NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 497
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D +L+ MYAKC DL+ S+++F+ + ++++ WN M+ ANA HG+G+E L L M
Sbjct: 498 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 557
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN---SMGRDHLVEPDANHYSCMVDVFSRA 356
GV + +F+ LS + +++EG Q+ +G +H D+ ++ D++S+
Sbjct: 558 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH----DSFIFNAAADMYSKC 613
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGA 384
G + E K + + + +W L+ A
Sbjct: 614 GEIGEVVKMLPP-SVNRSLPSWNILISA 640
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 54/427 (12%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SDV++S A++H YG + +R+VF+++ R+VVSWTSL Y + G P + + I+
Sbjct: 90 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 149
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M GV N ++S ++ +C LKD + G+ I G V+ G+ + V ++L+SM
Sbjct: 150 GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 209
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+V A +FD M RD +SWN + AY N E+ +FS M R
Sbjct: 210 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR--------------- 254
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
+ N T+S++L ++ + G+ +H GL ++G
Sbjct: 255 --------------------FHDEVNSTTVSTLLSVLGHVDHQKWGRGIH--GLVVKMGF 292
Query: 241 LSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
S L+ MYA + VF MP KD+++WN+++ + G +AL L +
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDE-----GLQIFNSMGRDHLVEPDANHYSCMVDV 352
M+ SG N VTFT L+ C ++ GL + + + + ++ + +V +
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------NALVSM 406
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNY 412
+ + G + E+ + + +MP AW AL+G ++ + A +AA + +E NY
Sbjct: 407 YGKIGEMSESRRVLLQMPRRDVV-AWNALIGGYAEDEDPDKA-LAAFQTMRVE-GVSSNY 463
Query: 413 VSLFNIL 419
+++ ++L
Sbjct: 464 ITVVSVL 470
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 181/375 (48%), Gaps = 45/375 (12%)
Query: 15 YGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTV 74
Y K ++ AR +FD + R+ VSW ++ S V GL +G+ F +M G+KP++ +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 75 SSILPACSELKDL-NSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
+S++ AC + G +HGF + G++ +V+V +A++ +Y V +R VF+ MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 134 HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLE 193
R+ VSW ++ Y E E+ + ++ M EGV GC EN
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV------------GCNEN-------- 161
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYA 252
++S ++ +C +L+ +G+++ ++ + L+ +L+ M
Sbjct: 162 ---------------SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLG 206
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+++ + +FD M ++D ++WN++ A A +G+ +E+ +F M R + NS T +
Sbjct: 207 SMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVST 266
Query: 313 VLSGCSHSRLVDEGLQIFN---SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+LS H G I MG D +V + ++ +++ AGR EA ++M
Sbjct: 267 LLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV----CNTLLRMYAGAGRSVEANLVFKQM 322
Query: 370 PLEPTASAWGALLGA 384
P + S W +L+ +
Sbjct: 323 PTKDLIS-WNSLMAS 336
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 33/259 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD + N+LI Y KC + ++ +F+ L R++++W ++ + + G + L + +M
Sbjct: 497 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 556
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
GV + + S L A ++L L G+ +HG AV+ G + F+ +A MY++C +
Sbjct: 557 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 616
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
E + +R SWN +++A + +E+ A F M G+K T+ +++ C
Sbjct: 617 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 676
Query: 183 MENGQTEESL---EMLRK------------------------------MQKMGFKPNEIT 209
G ++ L +M+ + + KM KPN++
Sbjct: 677 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 736
Query: 210 ISSILPACSILESLRMGKE 228
S+L +C I +L G++
Sbjct: 737 WRSLLASCKIHGNLDRGRK 755
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 39/272 (14%)
Query: 115 MYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
MY + VK AR +FD+MP R+ VSWN +++ Y +G+ F +M
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC---------- 50
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESL-RMGKEVHCYG 233
+G KP+ I+S++ AC S+ R G +VH +
Sbjct: 51 -------------------------DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 85
Query: 234 LRH-RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
+ + D+ +TA++++Y ++ SR VF+ MP ++VV+W ++++ + G +E +
Sbjct: 86 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVI 145
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
+++ M GV N + + V+S C + G QI + + L A S ++ +
Sbjct: 146 DIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS-LISM 204
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
G +D A +M T S W ++ A
Sbjct: 205 LGSMGNVDYANYIFDQMSERDTIS-WNSIAAA 235
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 19/256 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D F+ NA Y KC I ++ V R + SW L S G + A FHEM
Sbjct: 599 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 658
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR-HGMVENVFVCSALVSMYARCLSV 122
G+KP VT S+L ACS ++ G A + R G+ + C ++ + R +
Sbjct: 659 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 718
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
EA MP + + + W +L + + ++G +S+ ++ + + +
Sbjct: 719 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSK--LEPEDDSVYVLSSN 776
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
E +E +RK +MGFK + ACS +++ +V +G IGD
Sbjct: 777 MFATTGRWEDVENVRK--QMGFKNIKKK-----QACSW---VKLKDKVSSFG----IGDR 822
Query: 242 SSTTALVYMYAKCSDL 257
+ + +YAK D+
Sbjct: 823 THPQTM-EIYAKLEDI 837
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 202/592 (34%), Positives = 312/592 (52%), Gaps = 54/592 (9%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSL-SSCYVNCGLPRQGLAIFHEMG 63
+FL ++ + A RVFD + W +L +C + + ++ +M
Sbjct: 83 LFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKML 142
Query: 64 WNG-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G P+ T +L AC+ + + GK +H V+HG +V+V + L+ +Y C +
Sbjct: 143 ERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCL 202
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
AR VFD MP R VSWN ++I
Sbjct: 203 DLARKVFDEMPERSLVSWN-----------------------------------SMIDAL 227
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+ G+ + +L++ R+MQ+ F+P+ T+ S+L AC+ L SL +G H + LR D++
Sbjct: 228 VRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVA 286
Query: 243 STT----ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+L+ MY KC L ++ VF M K+D+ +WN MI+ A HG +EA+ F+ M
Sbjct: 287 MDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRM 346
Query: 299 L--RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+ R V+PNSVTF G+L C+H V++G Q F+ M RD+ +EP HY C+VD+ +RA
Sbjct: 347 VDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARA 406
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGAC-RVFKNVELAKIAAKKLFDIEPNN------- 408
G + EA + MP++P A W +LL AC + +VEL++ A+ + + +N
Sbjct: 407 GYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNC 466
Query: 409 PGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGS 468
G YV L + SA W++ +R LM + GI K PGCS +++ H F GD S+ +
Sbjct: 467 SGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQT 526
Query: 469 DKIYEFLDELGQKMKLAGYKPDTDY--VLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQ 526
+IY+ L + +++ GY PD ++ + K SL HSE+LA+AFG++NL Q
Sbjct: 527 KQIYQQLKVIDDRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQ 586
Query: 527 SSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+ IR+FKNLR+C DCH K +S V IIVRD +RFHHFK+G+CSC D W
Sbjct: 587 TPIRIFKNLRVCNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV+++N LIH YG C C++ AR+VFD++ R +VSW S+ V G L +F EM
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE---NVFVCSALVSMYARCL 120
+P+ T+ S+L AC+ L L+ G H F +R V+ +V V ++L+ MY +C
Sbjct: 245 -RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM--SREGVKADKATWNAV 178
S++ A VF M RD SWN ++ + T+ E+ + F RM RE V+ + T+ +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 179 IGGCMENG 186
+ C G
Sbjct: 364 LIACNHRG 371
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 360 bits (925), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/574 (33%), Positives = 324/574 (56%), Gaps = 39/574 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ + N+L Y A ++F + +D+VSWT++ S Y LP + + + M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ VKP+ +TV+++L AC+ L DL++G +H A++ ++ V V + L++MY++C +
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCID 450
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A +F +P ++ +S W ++I G
Sbjct: 451 KALDIFHNIPRKNVIS-----------------------------------WTSIIAGLR 475
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
N + E+L LR+M KM +PN IT+++ L AC+ + +L GKE+H + LR +G D
Sbjct: 476 LNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDF 534
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
AL+ MY +C +N + + F+ KKDV +WN ++ + G G + LF+ M++S
Sbjct: 535 LPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFDRMVKSR 593
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V+P+ +TF +L GCS S++V +GL F+ M D+ V P+ HY+C+VD+ RAG L EA
Sbjct: 594 VRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEA 652
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+KFIQ+MP+ P + WGALL ACR+ ++L +++A+ +F+++ + G Y+ L N+
Sbjct: 653 HKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADC 712
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
W E +++R +MK+ G+T GCSW++V +VH F+ D+ + + +I L+ +KM
Sbjct: 713 GKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKM 772
Query: 483 KLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCH 542
G ++ D + + E C HSE+ A+AFG++N I V KNL +C +CH
Sbjct: 773 SEVGLTKISESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCH 832
Query: 543 NAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQD 576
+ +K++S V I VRD+ FHHFK+G CSC D
Sbjct: 833 DTVKFISKTVRREISVRDAEHFHHFKDGECSCGD 866
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 192/408 (47%), Gaps = 44/408 (10%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V L NA + + + + A VF + R++ SW L Y G + + ++H M W
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 65 -NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
GVKP+ T +L C + DL GK +H VR+G ++ V +AL++MY +C VK
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR +FD MP RD +SWN +++ YF N +GL LF M G+ D
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAM--RGLSVD------------ 294
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
P+ +T++S++ AC +L R+G+++H Y + D+S
Sbjct: 295 ---------------------PDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS 333
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L MY + +F M +KD+V+W TMI + +A+ + M +
Sbjct: 334 VCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDS 393
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVE--PDANHYSCMVDVFSRAGRLD 360
VKP+ +T VLS C+ +D G+++ + L+ AN+ +++++S+ +D
Sbjct: 394 VKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANN---LINMYSKCKCID 450
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKL-FDIEPN 407
+A +P + S W +++ R+ A I +++ ++PN
Sbjct: 451 KALDIFHNIPRKNVIS-WTSIIAGLRLNNRCFEALIFLRQMKMTLQPN 497
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 187/385 (48%), Gaps = 50/385 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ + NALI Y KC ++ AR +FD + RD++SW ++ S Y G+ +GL +F M
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR 289
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
V P+ +T++S++ AC L D G+ IH + + G ++ VC++L MY S +
Sbjct: 290 GLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWR 349
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
EA +F M +D VSW +++ Y N +K + + M ++ VK D+ T AV
Sbjct: 350 EAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAV----- 404
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLS 242
L AC+ L L G E+H ++ R I +
Sbjct: 405 ------------------------------LSACATLGDLDTGVELHKLAIKARLISYVI 434
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
L+ MY+KC ++ + ++F +P+K+V++W ++I ++ EAL+ M +
Sbjct: 435 VANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMT 493
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIF-----NSMGRDHLVEPDANHYSCMVDVFSRAG 357
++PN++T T L+ C+ + G +I +G D + P+A ++D++ R G
Sbjct: 494 LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFL-PNA-----LLDMYVRCG 547
Query: 358 RLDEAYKFIQRMPLEPTASAWGALL 382
R++ A+ Q + ++W LL
Sbjct: 548 RMNTAWS--QFNSQKKDVTSWNILL 570
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 112/206 (54%), Gaps = 2/206 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S V ++N LI+ Y KCKCI+ A +F ++ ++V+SWTS+ + + L
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M ++PNA+T+++ L AC+ + L GK IH +R G+ + F+ +AL+ MY RC
Sbjct: 489 QMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCG 547
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ A + F+ +D SWN +LT Y + + LF RM + V+ D+ T+ +++
Sbjct: 548 RMNTAWSQFN-SQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLC 606
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPN 206
GC ++ + L KM+ G PN
Sbjct: 607 GCSKSQMVRQGLMYFSKMEDYGVTPN 632
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
G NG+ EE++++L MQ++ +E +++ C + G +V+ L
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIAL----SS 123
Query: 241 LSST-----TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+SS A + M+ + +L + VF M ++++ +WN ++ A G EA+ L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 296 ENML-RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
ML GVKP+ TF VL C + G ++ + R + E D + + ++ ++
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYV 242
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALL 382
+ G + A RMP S W A++
Sbjct: 243 KCGDVKSARLLFDRMPRRDIIS-WNAMI 269
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 358 bits (919), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 189/536 (35%), Positives = 303/536 (56%), Gaps = 39/536 (7%)
Query: 46 YVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVEN 105
YVN + L ++EM G +P+ T +L AC+ LK + GK IHG + G+ +
Sbjct: 107 YVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEAD 166
Query: 106 VFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR 165
VFV ++L++MY RC ++ + AVF+ + + A SW+ +++A
Sbjct: 167 VFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSA------------------- 207
Query: 166 EGVKADKATWNAVIGGCMENGQTEESLEMLRKM-QKMGFKPNEITISSILPACSILESLR 224
+A W+ E L + R M + K E + S L AC+ +L
Sbjct: 208 ---RAGMGMWS-------------ECLLLFRGMCSETNLKAEESGMVSALLACANTGALN 251
Query: 225 MGKEVHCYGLRHRIGDLS--STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIAN 282
+G +H + LR+ I +L+ T+LV MY KC L+ + ++F M K++ + ++ MI
Sbjct: 252 LGMSIHGFLLRN-ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGL 310
Query: 283 AMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPD 342
A+HG G+ AL +F M++ G++P+ V + VL+ CSHS LV EG ++F M ++ VEP
Sbjct: 311 ALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPT 370
Query: 343 ANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLF 402
A HY C+VD+ RAG L+EA + IQ +P+E W L CRV +N+EL +IAA++L
Sbjct: 371 AEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELL 430
Query: 403 DIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGD 462
+ +NPG+Y+ + N+ ++W + ++ R + +G+ +TPG S +++ + H FV D
Sbjct: 431 KLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQD 490
Query: 463 RSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILN 522
RS+ +IY+ L ++ ++K GY PD +L +VD+EEK E L HS+K+A+AFG+L
Sbjct: 491 RSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLKGHSQKVAIAFGLLY 550
Query: 523 LNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
S I++ +NLR+C DCH K +S + I+VRD RFH FK G CSC+D W
Sbjct: 551 TPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFKGGTCSCKDYW 606
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 1/203 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +DVF+ N+LI+ YG+C +E + VF+ L + SW+S+ S G+ + L +F
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 61 EM-GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M +K + S L AC+ LN G +IHGF +R+ N+ V ++LV MY +C
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKC 282
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ +A +F M R+ ++++ +++ + E E L +FS+M +EG++ D + +V+
Sbjct: 283 GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVL 342
Query: 180 GGCMENGQTEESLEMLRKMQKMG 202
C +G +E + +M K G
Sbjct: 343 NACSHSGLVKEGRRVFAEMLKEG 365
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
+N +I G + EE+L +M + G +P+ T +L AC+ L+S+R GK++H G
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIH--GQ 157
Query: 235 RHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
++G D+ +L+ MY +C ++ LS VF+ + K +W++M+ A A G E
Sbjct: 158 VFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSEC 217
Query: 292 LLLFENML-RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
LLLF M + +K L C+++ ++ G+ I + R+ + E + + +V
Sbjct: 218 LLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN-ISELNIIVQTSLV 276
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD--IEPNN 408
D++ + G LD+A Q+M + + A++ + E A K+ +EP++
Sbjct: 277 DMYVKCGCLDKALHIFQKMEKRNNLT-YSAMISGLALHGEGESALRMFSKMIKEGLEPDH 335
Query: 409 PGNYVSLFNILVSAKLWSEASQIRILMKDRG 439
YVS+ N + L E ++ M G
Sbjct: 336 V-VYVSVLNACSHSGLVKEGRRVFAEMLKEG 365
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ + +L+ Y KC C++ A +F + R+ ++++++ S G L +F +M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV---FVCSALVSMYARCL 120
G++P+ V S+L ACS + G+ + ++ G VE + C LV + R
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGC--LVDLLGRAG 385
Query: 121 SVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKG 156
++EA +P ++ V W L+ + E G
Sbjct: 386 LLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELG 422
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 197/571 (34%), Positives = 316/571 (55%), Gaps = 37/571 (6%)
Query: 10 ALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKP 69
L+ Y + + A +VF+++ DVV W+ + + + G + + +F M V P
Sbjct: 287 GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP 346
Query: 70 NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF 129
N T+SSIL C+ K G+ +HG V+ G +++V +AL+ +YA+C
Sbjct: 347 NEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKC---------- 396
Query: 130 DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
++ + + LF+ +S + ++ +WN VI G G+
Sbjct: 397 ---------------------EKMDTAVKLFAELSSK----NEVSWNTVIVGYENLGEGG 431
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIGDLSSTTALV 248
++ M R+ + E+T SS L AC+ L S+ +G +VH ++ + ++ + +L+
Sbjct: 432 KAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI 491
Query: 249 YMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSV 308
MYAKC D+ +++VF+ M DV +WN +I + HG G++AL + + M KPN +
Sbjct: 492 DMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGL 551
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQR 368
TF GVLSGCS++ L+D+G + F SM RDH +EP HY+CMV + R+G+LD+A K I+
Sbjct: 552 TFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEG 611
Query: 369 MPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEA 428
+P EP+ W A+L A N E A+ +A+++ I P + YV + N+ AK W+
Sbjct: 612 IPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWANV 671
Query: 429 SQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYK 488
+ IR MK+ G+ K PG SW++ VH F VG + I L+ L K AGY
Sbjct: 672 ASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGYV 731
Query: 489 PDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNL-NGQSSIRVFKNLRICGDCHNAIKY 547
PD + VL D+D EEK + L HSE+LA+A+G++ + + ++ I + KNLRIC DCH+A+K
Sbjct: 732 PDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKV 791
Query: 548 MSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+S++V +++RD RFHHF G CSC D W
Sbjct: 792 ISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 175/383 (45%), Gaps = 42/383 (10%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S+ F+ ALI+AY C ++ AR VF+ ++ +D+V W + SCYV G L + M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G PN T + L A L + K +HG ++ V + V L+ +Y + +
Sbjct: 239 RMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDM 298
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+A VF+ MP D V W+ ++ + N + + LF RM V ++ T
Sbjct: 299 SDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFT-------- 350
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG--- 239
+SSIL C+I + +G+++H GL ++G
Sbjct: 351 ---------------------------LSSILNGCAIGKCSGLGEQLH--GLVVKVGFDL 381
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ + AL+ +YAKC ++ + +F + K+ V+WNT+I+ G G +A +F L
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
R+ V VTF+ L C+ +D G+Q+ + + + A S ++D++++ G +
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS-LIDMYAKCGDI 500
Query: 360 DEAYKFIQRMPLEPTASAWGALL 382
A M AS W AL+
Sbjct: 501 KFAQSVFNEMETIDVAS-WNALI 522
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 55/374 (14%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+F +N L++AY K + A +FD++ R+ VS+ +L+ Y C P + ++ +
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA-CQDP---IGLYSRLH 138
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G + N +S L L +H V+ G N FV +AL++ Y+ C SV
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR VF+ + +D V W G+++ Y N +E L L S C
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLS--------------------C- 237
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH------CYGLRHR 237
M+ GF PN T + L A L + K VH CY L R
Sbjct: 238 --------------MRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
+G L+ +Y + D++ + VF+ MPK DVV W+ MI +G EA+ LF
Sbjct: 284 VG-----VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIR 338
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSR 355
M + V PN T + +L+GC+ + G Q+ + + V D + Y + ++DV+++
Sbjct: 339 MREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVK---VGFDLDIYVSNALIDVYAK 395
Query: 356 AGRLDEAYKFIQRM 369
++D A K +
Sbjct: 396 CEKMDTAVKLFAEL 409
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 1/203 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+++SNALI Y KC+ ++ A ++F +L ++ VSW ++ Y N G + ++F E
Sbjct: 382 DIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREAL 441
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
N V VT SS L AC+ L ++ G +HG A++ + V V ++L+ MYA+C +K
Sbjct: 442 RNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIK 501
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A++VF+ M D SWN +++ Y T+ + L + M K + T+ V+ GC
Sbjct: 502 FAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCS 561
Query: 184 ENGQTEESLEMLRKM-QKMGFKP 205
G ++ E M + G +P
Sbjct: 562 NAGLIDQGQECFESMIRDHGIEP 584
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V +SN+LI Y KC I+ A+ VF+++ DV SW +L S Y GL RQ L I M
Sbjct: 484 VAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKD 543
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR-HGMVENVFVCSALVSMYARCLSVK 123
KPN +T +L CS ++ G+ +R HG+ + + +V + R +
Sbjct: 544 RDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLD 603
Query: 124 EARAVFDLMPHRDAVS-WNGVLTAYFTNKEYEKGLALFSRMSREGV----KADKATWNAV 178
+A + + +P+ +V W +L+A E F+R S E + D+AT+ V
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEE-----FARRSAEEILKINPKDEATYVLV 658
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFK 204
Q + + M++MG K
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVK 684
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 292/501 (58%), Gaps = 13/501 (2%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDVF+ N +I Y KC IE AR+VFD++ RDVVSW S+ S Y G ++ M
Sbjct: 165 SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM 224
Query: 63 -GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
+ KPN VTV S+ AC + DL G +H + + + ++ +C+A++ YA+C S
Sbjct: 225 LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS 284
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ ARA+FD M +D+V++ +++ Y + ++ +ALFS M G+ +TWNA+I G
Sbjct: 285 LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGL----STWNAMISG 340
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GD 240
M+N EE + R+M + G +PN +T+SS+LP+ + +L+ GKE+H + +R+ +
Sbjct: 341 LMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNN 400
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ TT+++ YAK L ++ VFD + ++AW +I A A+HG+ A LF+ M
Sbjct: 401 IYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQC 460
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G KP+ VT T VLS +HS D IF+SM + +EP HY+CMV V SRAG+L
Sbjct: 461 LGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLS 520
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
+A +FI +MP++P A WGALL V ++E+A+ A +LF++EP N GNY + N+
Sbjct: 521 DAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYT 580
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
A W EA +R MK G+ K PG SW++ + +F+ D S S ++YE ++ L +
Sbjct: 581 QAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVE 640
Query: 481 KMKLAGYKPDTDYVL-QDVDQ 500
M D +Y+ Q++D+
Sbjct: 641 SM------SDKEYIRKQELDE 655
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 351 bits (900), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 191/571 (33%), Positives = 309/571 (54%), Gaps = 47/571 (8%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+ NAL+ YGK + +RRV + RDVV+W +L Y P + LA F M G
Sbjct: 382 IGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG 441
Query: 67 VKPNAVTVSSILPACSELKDL-NSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
V N +TV S+L AC DL GK +H + V G + V ++L++MYA+C + +
Sbjct: 442 VSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSS 501
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+ +F+ + +R+ + TWNA++ +
Sbjct: 502 QDLFNGLDNRNII-----------------------------------TWNAMLAANAHH 526
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLS 242
G EE L+++ KM+ G ++ + S L A + L L G+++H GL ++G D
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH--GLAVKLGFEHDSF 584
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMP---KKDVVAWNTMIIANAMHGNGKEALLLFENML 299
A MY+KC ++ V M+P + + +WN +I A HG +E F ML
Sbjct: 585 IFNAAADMYSKCGEIG---EVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
G+KP VTF +L+ CSH LVD+GL ++ + RD +EP H C++D+ R+GRL
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EA FI +MP++P W +LL +C++ N++ + AA+ L +EP + YV N+
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMF 761
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
+ W + +R M + I K CSW+++ ++V +F +GDR++ + +IY L+++
Sbjct: 762 ATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIK 821
Query: 480 QKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
+ +K +GY DT LQD D+E+K +L NHSE+LA+A+ +++ S++R+FKNLRIC
Sbjct: 822 KLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICS 881
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNG 570
DCH+ K++S V+G I++RD RFHHF+ G
Sbjct: 882 DCHSVYKFVSRVIGRRIVLRDQYRFHHFERG 912
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 186/388 (47%), Gaps = 47/388 (12%)
Query: 3 SDVFLSNALIHAY-GKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
S V + N L+ Y G + +E A VF + +D++SW SL + +VN G L +
Sbjct: 277 SVVCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 335
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M +G N VT +S L AC G+ +HG V G+ N + +ALVSMY +
Sbjct: 336 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 395
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ E+R V MP RD V+WN ++ Y +++ +K LA F M EGV +
Sbjct: 396 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS----------- 444
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL-ESLRMGKEVHCYGLRHRI-G 239
N IT+ S+L AC + + L GK +H Y +
Sbjct: 445 ------------------------NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFES 480
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D +L+ MYAKC DL+ S+++F+ + ++++ WN M+ ANA HG+G+E L L M
Sbjct: 481 DEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR 540
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN---SMGRDHLVEPDANHYSCMVDVFSRA 356
GV + +F+ LS + +++EG Q+ +G +H D+ ++ D++S+
Sbjct: 541 SFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEH----DSFIFNAAADMYSKC 596
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGA 384
G + E K + + + +W L+ A
Sbjct: 597 GEIGEVVKMLPP-SVNRSLPSWNILISA 623
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 203/427 (47%), Gaps = 54/427 (12%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SDV++S A++H YG + +R+VF+++ R+VVSWTSL Y + G P + + I+
Sbjct: 73 LLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK 132
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M GV N ++S ++ +C LKD + G+ I G V+ G+ + V ++L+SM
Sbjct: 133 GMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG 192
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+V A +FD M RD +SWN + AY N E+ +FS M R
Sbjct: 193 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRR--------------- 237
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
+ N T+S++L ++ + G+ +H GL ++G
Sbjct: 238 --------------------FHDEVNSTTVSTLLSVLGHVDHQKWGRGIH--GLVVKMGF 275
Query: 241 LSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
S L+ MYA + VF MP KD+++WN+++ + G +AL L +
Sbjct: 276 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 335
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDE-----GLQIFNSMGRDHLVEPDANHYSCMVDV 352
M+ SG N VTFT L+ C ++ GL + + + + ++ + +V +
Sbjct: 336 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------NALVSM 389
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNY 412
+ + G + E+ + + +MP AW AL+G ++ + A +AA + +E NY
Sbjct: 390 YGKIGEMSESRRVLLQMPRRDVV-AWNALIGGYAEDEDPDKA-LAAFQTMRVE-GVSSNY 446
Query: 413 VSLFNIL 419
+++ ++L
Sbjct: 447 ITVVSVL 453
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 171/356 (48%), Gaps = 45/356 (12%)
Query: 34 RDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDL-NSGKA 92
R+ VSW ++ S V GL +G+ F +M G+KP++ ++S++ AC + G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 93 IHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKE 152
+HGF + G++ +V+V +A++ +Y V +R VF+ MP R+ VSW ++ Y E
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 153 YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
E+ + ++ M EGV GC EN ++S
Sbjct: 124 PEEVIDIYKGMRGEGV------------GCNEN-----------------------SMSL 148
Query: 213 ILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
++ +C +L+ +G+++ ++ + L+ +L+ M +++ + +FD M ++D
Sbjct: 149 VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
++WN++ A A +G+ +E+ +F M R + NS T + +LS H G I
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268
Query: 332 ---SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
MG D +V + ++ +++ AGR EA ++MP + S W +L+ +
Sbjct: 269 LVVKMGFDSVVCV----CNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMAS 319
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 118/259 (45%), Gaps = 33/259 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD + N+LI Y KC + ++ +F+ L R++++W ++ + + G + L + +M
Sbjct: 480 SDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKM 539
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
GV + + S L A ++L L G+ +HG AV+ G + F+ +A MY++C +
Sbjct: 540 RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEI 599
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
E + +R SWN +++A + +E+ A F M G+K T+ +++ C
Sbjct: 600 GEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTAC 659
Query: 183 MENGQTEESL---EMLRK------------------------------MQKMGFKPNEIT 209
G ++ L +M+ + + KM KPN++
Sbjct: 660 SHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLV 719
Query: 210 ISSILPACSILESLRMGKE 228
S+L +C I +L G++
Sbjct: 720 WRSLLASCKIHGNLDRGRK 738
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 111/255 (43%), Gaps = 39/255 (15%)
Query: 132 MPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES 191
MP R+ VSWN +++ Y +G+ F +M
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC--------------------------- 33
Query: 192 LEMLRKMQKMGFKPNEITISSILPACSILESL-RMGKEVHCYGLRH-RIGDLSSTTALVY 249
+G KP+ I+S++ AC S+ R G +VH + + + D+ +TA+++
Sbjct: 34 --------DLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILH 85
Query: 250 MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVT 309
+Y ++ SR VF+ MP ++VV+W ++++ + G +E + +++ M GV N +
Sbjct: 86 LYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENS 145
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ V+S C + G QI + + L A S ++ + G +D A +M
Sbjct: 146 MSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS-LISMLGSMGNVDYANYIFDQM 204
Query: 370 PLEPTASAWGALLGA 384
T S W ++ A
Sbjct: 205 SERDTIS-WNSIAAA 218
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 19/256 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D F+ NA Y KC I ++ V R + SW L S G + A FHEM
Sbjct: 582 DSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEML 641
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR-HGMVENVFVCSALVSMYARCLSV 122
G+KP VT S+L ACS ++ G A + R G+ + C ++ + R +
Sbjct: 642 EMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRL 701
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
EA MP + + + W +L + + ++G +S+ ++ + + +
Sbjct: 702 AEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSK--LEPEDDSVYVLSSN 759
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
E +E +RK +MGFK + ACS +++ +V +G IGD
Sbjct: 760 MFATTGRWEDVENVRK--QMGFKNIKKK-----QACSW---VKLKDKVSSFG----IGDR 805
Query: 242 SSTTALVYMYAKCSDL 257
+ + +YAK D+
Sbjct: 806 THPQTM-EIYAKLEDI 820
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 348 bits (893), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 195/584 (33%), Positives = 309/584 (52%), Gaps = 46/584 (7%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V + N+L+ Y KC I A +VF +V R ++SW ++ + +V+ G + L F M
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 65 NGVK--PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM--VENVFVCSALVSMYARCL 120
+K P+ T++S+L ACS + +GK IHGF VR G + + +LV +Y +C
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ AR FD + + +SW+ ++I
Sbjct: 262 YLFSARKAFDQIKEKTMISWS-----------------------------------SLIL 286
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
G + G+ E++ + +++Q++ + + +SSI+ + LR GK++ ++ G
Sbjct: 287 GYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGL 346
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ S ++V MY KC ++ + F M KDV++W +I HG GK+++ +F ML
Sbjct: 347 ETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEML 406
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
R ++P+ V + VLS CSHS ++ EG ++F+ + H ++P HY+C+VD+ RAGRL
Sbjct: 407 RHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRL 466
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EA I MP++P W LL CRV ++EL K K L I+ NP NYV + N+
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLY 526
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
A W+E R L +G+ K G SW+++ VH F G+ S+ + I E L E
Sbjct: 527 GQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAE 586
Query: 480 QKMKLA-GYKPDTDYVLQDVDQEEKAESLCNHSEKLAV----AFGILNLNGQSSIRVFKN 534
++++ GY + L D+D E K E+L HSEKLA+ A G LN G+ +IRVFKN
Sbjct: 587 RRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGK-TIRVFKN 645
Query: 535 LRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
LR+C DCH IK +S + + +VRD++RFH F++G CSC D W
Sbjct: 646 LRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 180/376 (47%), Gaps = 37/376 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ SN LI Y KC+ A +VFD + R+VVSW++L S +V G + L++F EMG
Sbjct: 40 NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMG 99
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+ PN T S+ L AC L L G IHGF ++ G V V ++LV MY++C +
Sbjct: 100 RQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRIN 159
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
EA VF + R +SWN ++ + K L F M +K
Sbjct: 160 EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE------------- 206
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR---HRIGD 240
+P+E T++S+L ACS + GK++H + +R H
Sbjct: 207 --------------------RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ T +LV +Y KC L +R FD + +K +++W+++I+ A G EA+ LF+ +
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+ +S + ++ + L+ +G Q+ ++ + + + +VD++ + G +D
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQM-QALAVKLPSGLETSVLNSVVDMYLKCGLVD 365
Query: 361 EAYKFIQRMPLEPTAS 376
EA K M L+ S
Sbjct: 366 EAEKCFAEMQLKDVIS 381
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 143/313 (45%), Gaps = 44/313 (14%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR 135
SIL C+ + G +H + ++ G N+ + L+ MY +C A VFD MP R
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
+ VSW+ +++ + N + + L+LFS M R+G+
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI--------------------------- 103
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYA 252
PNE T S+ L AC +L +L G ++H + L +IG + +LV MY+
Sbjct: 104 --------YPNEFTFSTNLKACGLLNALEKGLQIHGFCL--KIGFEMMVEVGNSLVDMYS 153
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK--PNSVTF 310
KC +N + VF + + +++WN MI G G +AL F M + +K P+ T
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP-DANHYSCMVDVFSRAGRLDEAYKFIQRM 369
T +L CS + ++ G QI + R P A +VD++ + G L A K ++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 370 PLEPTASAWGALL 382
E T +W +L+
Sbjct: 274 K-EKTMISWSSLI 285
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S ++ +L+ Y KC + AR+ FD + + ++SW+SL Y G + + +F +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ ++ +SSI+ ++ L GK + AV+ V +++V MY +C V
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
EA F M +D +SW V+T Y + +K + +F M R ++ D+ + AV+ C
Sbjct: 365 DEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSAC 424
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+G +E E+ K+ + +G++ R+
Sbjct: 425 SHSGMIKEGEELFSKL------------------------------LETHGIKPRV---E 451
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGN---GKE 290
+V + + L ++++ D MP K +V W T++ +HG+ GKE
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKE 503
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 281/488 (57%), Gaps = 37/488 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+FL++ALI AY KC+ + A+ +F DVV +T++ S Y++ GL L +F +
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ PN +T+ SILP L L G+ +HGF ++ G + A++ MYA+C +
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMN 493
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +F+ + RD VS WN++I C
Sbjct: 494 LAYEIFERLSKRDIVS-----------------------------------WNSMITRCA 518
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
++ ++++ R+M G + ++IS+ L AC+ L S GK +H + ++H + D+
Sbjct: 519 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 578
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RS 301
S + L+ MYAKC +L + NVF M +K++V+WN++I A HG K++L LF M+ +S
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G++P+ +TF ++S C H VDEG++ F SM D+ ++P HY+C+VD+F RAGRL E
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
AY+ ++ MP P A WG LLGACR+ KNVELA++A+ KL D++P+N G YV + N +
Sbjct: 699 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 758
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
A+ W +++R LMK+R + K PG SW+++ R H FV GD ++ S IY L+ L +
Sbjct: 759 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 818
Query: 482 MKLAGYKP 489
++L GY P
Sbjct: 819 LRLEGYIP 826
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 116/380 (30%), Positives = 193/380 (50%), Gaps = 38/380 (10%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+ N+L+ Y KC + A ++F + D V+W + S YV GL + L F+EM +G
Sbjct: 276 IKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
V P+A+T SS+LP+ S+ ++L K IH + +RH + ++F+ SAL+ Y +C V A+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
+F N V FT A+I G + NG
Sbjct: 396 NIFS--------QCNSVDVVVFT---------------------------AMISGYLHNG 420
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-T 245
+SLEM R + K+ PNEIT+ SILP IL +L++G+E+H + ++ + +
Sbjct: 421 LYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGC 480
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
A++ MYAKC +NL+ +F+ + K+D+V+WN+MI A N A+ +F M SG+
Sbjct: 481 AVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICY 540
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ V+ + LS C++ G I M + H + D S ++D++++ G L A
Sbjct: 541 DCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKCGNLKAAMNV 599
Query: 366 IQRMPLEPTASAWGALLGAC 385
+ M E +W +++ AC
Sbjct: 600 FKTMK-EKNIVSWNSIIAAC 618
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 185/386 (47%), Gaps = 38/386 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M + F++++LI AY + I+ ++FD ++ +D V W + + Y CG + F
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M + + PNAVT +L C+ ++ G +HG V G+ + ++L+SMY++C
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG 288
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+A +F +M +AD TWN +I
Sbjct: 289 RFDDASKLFRMMS-----------------------------------RADTVTWNCMIS 313
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
G +++G EESL +M G P+ IT SS+LP+ S E+L K++HCY +RH I
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISL 373
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ T+AL+ Y KC +++++N+F DVV + MI +G ++L +F ++
Sbjct: 374 DIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV 433
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ + PN +T +L + G ++ + + + N ++D++++ GR+
Sbjct: 434 KVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF-DNRCNIGCAVIDMYAKCGRM 492
Query: 360 DEAYKFIQRMPLEPTASAWGALLGAC 385
+ AY+ +R+ S W +++ C
Sbjct: 493 NLAYEIFERLSKRDIVS-WNSMITRC 517
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 134/311 (43%), Gaps = 38/311 (12%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
+S +L ACS L GK +H F + + + + + ++ MYA C S + +F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 134 HRDAV--SWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES 191
R + WN +++++ N + LA + +M GV D +T+ ++ C+ +
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 192 LEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMY 251
+ + +G NE SS++ A Y
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKA----------------------------------Y 183
Query: 252 AKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
+ +++ +FD + +KD V WN M+ A G + F M + PN+VTF
Sbjct: 184 LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFD 243
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
VLS C+ L+D G+Q+ + + V+ + + + ++ ++S+ GR D+A K + M
Sbjct: 244 CVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSR 302
Query: 372 EPTASAWGALL 382
T + W ++
Sbjct: 303 ADTVT-WNCMI 312
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 5/203 (2%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SDV+ + LI Y KC ++ A VF + +++VSW S+ + N G + L +FH
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFH 632
Query: 61 EM-GWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYAR 118
EM +G++P+ +T I+ +C + D++ G + +G+ + +V ++ R
Sbjct: 633 EMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGR 692
Query: 119 CLSVKEARAVFDLMPH-RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
+ EA MP DA W +L A +K E LA + + + +
Sbjct: 693 AGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVE--LAEVASSKLMDLDPSNSGYYV 750
Query: 178 VIGGCMENGQTEESLEMLRKMQK 200
+I N + ES+ +R + K
Sbjct: 751 LISNAHANAREWESVTKVRSLMK 773
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 194/537 (36%), Positives = 292/537 (54%), Gaps = 48/537 (8%)
Query: 52 PRQGLAIFHEMGWNGVKP-NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCS 110
P +G +F + N P N ++ S L C + DL G IHG G + + + +
Sbjct: 93 PCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMT 152
Query: 111 ALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
L+ +Y+ C + +A VFD +P RD VS
Sbjct: 153 TLMDLYSTCENSTDACKVFDEIPKRDTVS------------------------------- 181
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQK---MGFKPNEITISSILPACSILESLRMGK 227
WN + + N +T + L + KM+ KP+ +T L AC+ L +L GK
Sbjct: 182 ----WNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGK 237
Query: 228 EVHCY----GLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANA 283
+VH + GL G L+ + LV MY++C ++ + VF M +++VV+W +I A
Sbjct: 238 QVHDFIDENGLS---GALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLA 294
Query: 284 MHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHL-VEPD 342
M+G GKEA+ F ML+ G+ P T TG+LS CSHS LV EG+ F+ M ++P+
Sbjct: 295 MNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN 354
Query: 343 ANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLF 402
+HY C+VD+ RA LD+AY I+ M ++P ++ W LLGACRV +VEL + L
Sbjct: 355 LHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLI 414
Query: 403 DIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGD 462
+++ G+YV L N + W + +++R LMK++ I PGCS +++ VH F+V D
Sbjct: 415 ELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDD 474
Query: 463 RSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVD-QEEKAESLCNHSEKLAVAFGIL 521
S+ ++IY+ L E+ Q++K+AGY + L +++ +EEK +L HSEKLA+AFGIL
Sbjct: 475 VSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGIL 534
Query: 522 NLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
++IRV KNLR C DCHN K++S+V +IVRD RFHHFK G+CSC D W
Sbjct: 535 VTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD L L+ Y C+ A +VFD++ RD VSW L SCY+ R L +F +M
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 63 GWN---GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+ VKP+ VT L AC+ L L+ GK +H F +G+ + + + LVSMY+RC
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRC 265
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
S+ +A VF M R+ VSW +++ N ++ + F+ M + G+ ++ T ++
Sbjct: 266 GSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLL 325
Query: 180 GGCMENGQTEESLEMLRKMQKMGF--KPN 206
C +G E + +M+ F KPN
Sbjct: 326 SACSHSGLVAEGMMFFDRMRSGEFKIKPN 354
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/428 (42%), Positives = 254/428 (59%), Gaps = 9/428 (2%)
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM-GFKPNEITISS 212
E GLA ++ R + TWN +IGG + N Q EE+L+ L+ M KPN+ + +S
Sbjct: 113 ESGLA--KKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIGDLSS--TTALVYMYAKCSDLNLSRNVFDMMPKK 270
L AC+ L L K VH + I +L++ ++ALV +YAKC D+ SR VF + +
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGI-ELNAILSSALVDVYAKCGDIGTSREVFYSVKRN 229
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
DV WN MI A HG EA+ +F M V P+S+TF G+L+ CSH L++EG + F
Sbjct: 230 DVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYF 289
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKN 390
M R ++P HY MVD+ RAGR+ EAY+ I+ MP+EP W +LL + R +KN
Sbjct: 290 GLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKN 349
Query: 391 VELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
EL +IA + L G+YV L NI S K W A ++R LM GI K G SWL+
Sbjct: 350 PELGEIAIQNL---SKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Query: 451 VGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNH 510
G +H F GD S+ + IY+ L+ L QK K G+ DTD VL DV +EEK E+L H
Sbjct: 407 FGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYH 466
Query: 511 SEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNG 570
SEKLA+A+ IL + + IR+ KN+R+C DCHN IK +S ++ II+RD +RFH F++G
Sbjct: 467 SEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDG 526
Query: 571 NCSCQDLW 578
CSC+D W
Sbjct: 527 LCSCRDYW 534
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGL-AIFHEMGWNGVKPNAVTVSSILPACS 82
A++V + ++V++W + YV + L A+ + + + +KPN + +S L AC+
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 83 ELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNG 142
L DL+ K +H + G+ N + SALV +YA+C + +R VF + D WN
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 143 VLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMG 202
++T + T+ + + +FS M E V D T+ ++ C G EE E M +
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR- 295
Query: 203 FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRN 262
SI P ++ YG A+V + + + +
Sbjct: 296 --------FSIQP------------KLEHYG------------AMVDLLGRAGRVKEAYE 323
Query: 263 VFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ + MP + DVV W +++ ++ + N + + +N+ ++
Sbjct: 324 LIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKA 363
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+ LS+AL+ Y KC I +R VF + DV W ++ + + GL + + +F EM
Sbjct: 199 NAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEME 258
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSV 122
V P+++T +L CS L GK G R ++ + A+V + R V
Sbjct: 259 AEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRV 318
Query: 123 KEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR 165
KEA + + MP D V W +L++ T K E G +S+
Sbjct: 319 KEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSK 362
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/559 (33%), Positives = 297/559 (53%), Gaps = 39/559 (6%)
Query: 24 ARRVFDDLVGRDVVS-WTSLSSCYVNCGLPRQGLAIFHEMGWNGV-KPNAVTVSSILPAC 81
A+ +FD S W L + N P + ++ M + V +P+ T + L +C
Sbjct: 58 AQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSC 117
Query: 82 SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWN 141
+K + IHG +R G +++ V ++LV Y+ SV+ A VFD MP RD VSWN
Sbjct: 118 ERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWN 177
Query: 142 GVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM 201
++ + + + L+++ RM EGV D
Sbjct: 178 VMICCFSHVGLHNQALSMYKRMGNEGVCGD------------------------------ 207
Query: 202 GFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLS 260
T+ ++L +C+ + +L MG +H R + + AL+ MYAKC L +
Sbjct: 208 -----SYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENA 262
Query: 261 RNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHS 320
VF+ M K+DV+ WN+MII +HG+G EA+ F M+ SGV+PN++TF G+L GCSH
Sbjct: 263 IGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQ 322
Query: 321 RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGA 380
LV EG++ F M + P+ HY CMVD++ RAG+L+ + + I W
Sbjct: 323 GLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRT 382
Query: 381 LLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
LLG+C++ +N+EL ++A KKL +E N G+YV + +I +A + +R L++ +
Sbjct: 383 LLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDL 442
Query: 441 TKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKP-DTDYVLQDVD 499
PG SW+++G++VH FVV D+ + S IY L E+ + LAGYKP D++ +
Sbjct: 443 QTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLS 502
Query: 500 QEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVR 559
+ +HSEKLA+A+G++ +++R+ KNLR+C DCH+ KY+S IIVR
Sbjct: 503 DRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVR 562
Query: 560 DSLRFHHFKNGNCSCQDLW 578
D +RFHHF +G CSC D W
Sbjct: 563 DRVRFHHFADGICSCNDYW 581
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 1/204 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D ++ +L+ Y +E A +VFD++ RD+VSW + C+ + GL Q L+++ MG
Sbjct: 141 DAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG 200
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
GV ++ T+ ++L +C+ + LN G +H A VFV +AL+ MYA+C S++
Sbjct: 201 NEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLE 260
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A VF+ M RD ++WN ++ Y + + ++ F +M GV+ + T+ ++ GC
Sbjct: 261 NAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCS 320
Query: 184 ENGQTEESLEMLRKM-QKMGFKPN 206
G +E +E M + PN
Sbjct: 321 HQGLVKEGVEHFEIMSSQFHLTPN 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 3/206 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S VF+SNALI Y KC +E A VF+ + RDV++W S+ Y G + ++ F +M
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
+GV+PNA+T +L CS + G + + + + NV +V +Y R
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 122 VKEA-RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKG-LALFSRMSREGVKADKATWNAVI 179
++ + ++ H D V W +L + ++ E G +A+ + E A I
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKP 205
+ Q S+ L + + P
Sbjct: 421 YSAANDAQAFASMRKLIRSHDLQTVP 446
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 290/516 (56%), Gaps = 45/516 (8%)
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
+ +A+T S L AC+ ++ +H R G+ + +C+ L+ Y++ + A
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
+FD MP RD A+WNA+I G + +
Sbjct: 166 LFDEMPVRDV-----------------------------------ASWNALIAGLVSGNR 190
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV-HCYGLRHRIGDLSSTTA 246
E++E+ ++M+ G + +E+T+ + L ACS L ++ G+ + H Y + I + A
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVI----VSNA 246
Query: 247 LVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
+ MY+KC ++ + VF+ KK VV WNTMI A+HG AL +F+ + +G+KP
Sbjct: 247 AIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKP 306
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ V++ L+ C H+ LV+ GL +FN+M VE + HY C+VD+ SRAGRL EA+
Sbjct: 307 DDVSYLAALTACRHAGLVEYGLSVFNNMACKG-VERNMKHYGCVVDLLSRAGRLREAHDI 365
Query: 366 IQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLW 425
I M + P W +LLGA ++ +VE+A+IA++++ ++ NN G++V L N+ + W
Sbjct: 366 ICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRW 425
Query: 426 SEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLA 485
+ ++R M+ + + K PG S+++ +H F D+S+ +IYE +DE+ K++
Sbjct: 426 KDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIRED 485
Query: 486 GYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNG---QSSIRVFKNLRICGDCH 542
GY T VL D+ +EEK +LC HSEKLAVA+G++ ++G +S +RV NLRICGDCH
Sbjct: 486 GYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLRICGDCH 545
Query: 543 NAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
K++S + IIVRD +RFH FK+G+CSC+D W
Sbjct: 546 VVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 115/233 (49%), Gaps = 7/233 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+++D L L+ AY K + A ++FD++ RDV SW +L + V+ + + ++
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYK 199
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARC 119
M G++ + VTV + L ACS L D+ G+ I HG++ +NV V +A + MY++C
Sbjct: 200 RMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSKC 254
Query: 120 LSVKEARAVFD-LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
V +A VF+ + V+WN ++T + + E + L +F ++ G+K D ++ A
Sbjct: 255 GFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAA 314
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
+ C G E L + M G + N ++ S LR ++ C
Sbjct: 315 LTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIIC 367
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 330 bits (847), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 276/496 (55%), Gaps = 5/496 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S++++ NAL+ Y C ++ AR VFD DV SW + S Y + + +
Sbjct: 166 LGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLV 225
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM N V P +VT+ +L ACS++KD + K +H + ++ + +ALV+ YA C
Sbjct: 226 EMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ A +F M RD +SW ++ Y + F +M D+ +W +I
Sbjct: 286 EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMID 341
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-G 239
G + G ESLE+ R+MQ G P+E T+ S+L AC+ L SL +G+ + Y +++I
Sbjct: 342 GYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKN 401
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ AL+ MY KC ++ VF M ++D W M++ A +G G+EA+ +F M
Sbjct: 402 DVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQ 461
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
++P+ +T+ GVLS C+HS +VD+ + F M DH +EP HY CMVD+ RAG +
Sbjct: 462 DMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLV 521
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EAY+ +++MP+ P + WGALLGA R+ + +A++AAKK+ ++EP+N Y L NI
Sbjct: 522 KEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIY 581
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
K W + ++R + D I KTPG S ++V H FV GD+S+ S++IY L+EL
Sbjct: 582 AGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELA 641
Query: 480 QKMKLAGYKPDTDYVL 495
Q+ A Y PDT +L
Sbjct: 642 QESTFAAYLPDTSELL 657
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 165/351 (47%), Gaps = 13/351 (3%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACS- 82
A ++F + DVV W ++ + +G+ ++ M GV P++ T +L
Sbjct: 87 AYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKR 146
Query: 83 ELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNG 142
+ L GK +H V+ G+ N++V +ALV MY+ C + AR VFD D SWN
Sbjct: 147 DGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNL 206
Query: 143 VLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMG 202
+++ Y KEYE+ + L M R V T V+ C + + + + +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 203 FKPN---EITISSILPACSILE-SLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLN 258
+P+ E + + AC ++ ++R+ + + + D+ S T++V Y + +L
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSM-------KARDVISWTSIVKGYVERGNLK 319
Query: 259 LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
L+R FD MP +D ++W MI G E+L +F M +G+ P+ T VL+ C+
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 319 HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
H ++ G I + ++ ++ D + ++D++ + G ++A K M
Sbjct: 380 HLGSLEIGEWIKTYIDKNK-IKNDVVVGNALIDMYFKCGCSEKAQKVFHDM 429
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 282/504 (55%), Gaps = 45/504 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SD F+ N+LI Y + A R+FD +DVV+WT++ +V G + + F
Sbjct: 134 LDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARC 119
EM GV N +TV S+L A +++D+ G+++HG + G V+ +VF+ S+LV MY +C
Sbjct: 194 EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+A+ VFD MP R+ V TW A+I
Sbjct: 254 SCYDDAQKVFDEMPSRNVV-----------------------------------TWTALI 278
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
G +++ ++ + + +M K PNE T+SS+L AC+ + +L G+ VHCY +++ I
Sbjct: 279 AGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIE 338
Query: 240 -DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ ++ T L+ +Y KC L + VF+ + +K+V W MI A HG ++A LF M
Sbjct: 339 INTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM 398
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L S V PN VTF VLS C+H LV+EG ++F SM +EP A+HY+CMVD+F R G
Sbjct: 399 LSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGL 458
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L+EA I+RMP+EPT WGAL G+C + K+ EL K AA ++ ++P++ G Y L N+
Sbjct: 459 LEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANL 518
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVV-GDRSNTGSDKIYEFLDE 477
++ W E +++R MKD+ + K+PG SW++V ++ F+ D+ SD +Y+ LD
Sbjct: 519 YSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDT 578
Query: 478 LGQKMKLAGYKPDTDYVLQDVDQE 501
+G +M+L PD L+DV E
Sbjct: 579 VGVQMRL----PDE---LEDVTAE 595
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 170/386 (44%), Gaps = 48/386 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLP---RQGLAIFH 60
D+FLS L ARR+ L + W SL + + G+ R +
Sbjct: 35 DLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIG-HFSGGITLNRRLSFLAYR 93
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M NGV P+ T +L A +L+D N + H V+ G+ + FV ++L+S Y+
Sbjct: 94 HMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSSSG 152
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
A +FD +D V+W ++ + N + + F M + GV A
Sbjct: 153 LFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA---------- 202
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
NE+T+ S+L A +E +R G+ VH GL G
Sbjct: 203 -------------------------NEMTVVSVLKAAGKVEDVRFGRSVH--GLYLETGR 235
Query: 240 ---DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
D+ ++LV MY KCS + ++ VFD MP ++VV W +I + +L+FE
Sbjct: 236 VKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFE 295
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
ML+S V PN T + VLS C+H + G ++ M ++ +E + + ++D++ +
Sbjct: 296 EMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS-IEINTTAGTTLIDLYVKC 354
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALL 382
G L+EA +R+ E W A++
Sbjct: 355 GCLEEAILVFERLH-EKNVYTWTAMI 379
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 184/549 (33%), Positives = 293/549 (53%), Gaps = 40/549 (7%)
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
GVKP+ +T +L + S+L G+A+H +++ + + FV +LV MYA+ +K A
Sbjct: 121 GVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHA 180
Query: 126 RAVFD-----------------------------------LMPHRDAVSWNGVLTAYFTN 150
VF+ MP R++ SW+ ++ Y +
Sbjct: 181 FQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS 240
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
E + LF M + V +W +I G + G E ++ +M + G KPNE TI
Sbjct: 241 GELNRAKQLFELMPEKNV----VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
+++L ACS +L G +H Y L + I D + TALV MYAKC +L+ + VF M
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
KD+++W MI A+HG +A+ F M+ SG KP+ V F VL+ C +S VD GL
Sbjct: 357 KDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNF 416
Query: 330 FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFK 389
F+SM D+ +EP HY +VD+ RAG+L+EA++ ++ MP+ P + W AL AC+ K
Sbjct: 417 FDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHK 476
Query: 390 NVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWL 449
A+ ++ L +++P G+Y+ L S + + R+ ++ R ++ G S++
Sbjct: 477 GYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYI 536
Query: 450 QVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCN 509
++ +++ F GD S+ + +I LDE+ GY P D+ + D+++EEK
Sbjct: 537 ELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKENVTGI 596
Query: 510 HSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKN 569
HSEKLA+ G L ++IR+ KNLRICGDCH+ +KY+S + I++RD+ +FHHFK+
Sbjct: 597 HSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQFHHFKD 656
Query: 570 GNCSCQDLW 578
G CSC D W
Sbjct: 657 GRCSCGDYW 665
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 103/191 (53%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
+ LI Y + A+++F+ + ++VVSWT+L + + G ++ + EM G+K
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
PN T++++L ACS+ L SG IHG+ + +G+ + + +ALV MYA+C + A V
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATV 350
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F M H+D +SW ++ + + + + + F +M G K D+ + AV+ C+ + +
Sbjct: 351 FSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEV 410
Query: 189 EESLEMLRKMQ 199
+ L M+
Sbjct: 411 DLGLNFFDSMR 421
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 17/218 (7%)
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
NA+I G EN + E S+ M ++G KP+ +T +L + S L +G+ +H L+
Sbjct: 95 NALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLK 154
Query: 236 HRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKE 290
+ + D +LV MYAK L + VF+ P K+ ++ WN +I +
Sbjct: 155 NFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHM 214
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
A LF RS + NS +++ ++ G S ++ Q+F M ++V ++ ++
Sbjct: 215 ATTLF----RSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS-----WTTLI 265
Query: 351 DVFSRAGRLDEA---YKFIQRMPLEPTASAWGALLGAC 385
+ FS+ G + A Y + L+P A+L AC
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSAC 303
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D + AL+ Y KC ++ A VF ++ +D++SWT++ + G Q + F +M
Sbjct: 327 DRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMM 386
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIH-----GFAVRHGMVENVFVCSALVSMYAR 118
++G KP+ V ++L AC +++ G +A+ + V V V + R
Sbjct: 387 YSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGR 442
Query: 119 CLSVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKG 156
+ EA + + MP + D +W + A +K Y +
Sbjct: 443 AGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRA 481
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 118/259 (45%), Gaps = 29/259 (11%)
Query: 205 PNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDL----NLS 260
P+E S++ AC SLR VH LR G LSS A CS L + S
Sbjct: 27 PDESHFISLIHACKDTASLR---HVHAQILRR--GVLSSRVAA--QLVSCSSLLKSPDYS 79
Query: 261 RNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHS 320
++F +++ N +I + + ++ F MLR GVKP+ +TF VL S+S
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLK--SNS 137
Query: 321 RLVDEGL-QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTAS 376
+L L + ++ + V+ D+ +VD++++ G+L A++ + P + +
Sbjct: 138 KLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 377 AWGALL-GACRVFKNVELAKIAAKKLFDIEPN-NPGNYVSLFNILVSAKLWSEASQIRIL 434
W L+ G CR K++ +A LF P N G++ +L V + + A Q+ L
Sbjct: 198 IWNVLINGYCRA-KDMHMATT----LFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFEL 252
Query: 435 MKDRGITKTPGCSWLQVGN 453
M ++ + SW + N
Sbjct: 253 MPEKNVV-----SWTTLIN 266
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 325 bits (832), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 278/476 (58%), Gaps = 5/476 (1%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
NA IH + C +E AR+VFD+ RD+VSW L + Y G + + ++ M GVK
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ VT+ ++ +CS L DLN GK + + +G+ + + +AL+ M+++C + EAR +
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
FD + R VSW +++ Y + LF M + D WNA+IGG ++ +
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRG 370
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTAL 247
+++L + ++MQ KP+EIT+ L ACS L +L +G +H Y ++ + +++ T+L
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
V MYAKC +++ + +VF + ++ + + +I A+HG+ A+ F M+ +G+ P+
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDE 490
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ 367
+TF G+LS C H ++ G F+ M + P HYS MVD+ RAG L+EA + ++
Sbjct: 491 ITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLME 550
Query: 368 RMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSE 427
MP+E A+ WGALL CR+ NVEL + AAKKL +++P++ G YV L + A +W +
Sbjct: 551 SMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWED 610
Query: 428 ASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
A + R +M +RG+ K PGCS ++V V F+V D+S S+KIY+ L LG+ M+
Sbjct: 611 AKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMR 666
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 174/364 (47%), Gaps = 9/364 (2%)
Query: 4 DVFLSNALIH--AYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
D F S+ LI A + + ++ + ++ + ++ SW + P++ ++ +
Sbjct: 84 DPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQ 143
Query: 62 MGWNGV---KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
M +G +P+ T + C++L+ + G I G ++ + V +A + M+A
Sbjct: 144 MLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFAS 203
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
C ++ AR VFD P RD VSWN ++ Y E EK + ++ M EGVK D T +
Sbjct: 204 CGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGL 263
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
+ C G E +++ G + +++++ S + + + L R
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF-DNLEKRT 322
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ S T ++ YA+C L++SR +FD M +KDVV WN MI + G++AL LF+ M
Sbjct: 323 --IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEM 380
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
S KP+ +T LS CS +D G+ I + + + + + + +VD++++ G
Sbjct: 381 QTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGN 439
Query: 359 LDEA 362
+ EA
Sbjct: 440 ISEA 443
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 103/253 (40%), Gaps = 13/253 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ +V L +L+ Y KC I A VF + R+ +++T++ G ++ F+
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGK-AIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G+ P+ +T +L AC + +G+ R + + S +V + R
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 120 LSVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
++EA + + MP DA W +L + E G ++ E +D + +
Sbjct: 540 GLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKL-LELDPSDSGIYVLL 598
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKP---------NEITISSILPACSILESLRMGKEV 229
G E E++ R M + G + N I I+ S ES ++ +
Sbjct: 599 DGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRL 658
Query: 230 HCYGLRHRIGDLS 242
HC G RH LS
Sbjct: 659 HCLG-RHMRSSLS 670
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 165/450 (36%), Positives = 257/450 (57%), Gaps = 40/450 (8%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+ NAL++ Y KC ++ AR VFD + RDV++WT + + Y G L + M + G
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
V+PNAVT++S++ C + +N GK +HG+AVR + ++ + ++L+SMYA+C
Sbjct: 315 VRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC------- 367
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
K + L R+ K W+A+I GC++N
Sbjct: 368 ----------------------------KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNE 399
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTT 245
++L + ++M++ +PN T++S+LPA + L LR +HCY + + L + T
Sbjct: 400 LVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAAT 459
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
LV++Y+KC L + +F+ + +K DVV W +I MHG+G AL +F M+RS
Sbjct: 460 GLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRS 519
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
GV PN +TFT L+ CSHS LV+EGL +F M + +NHY+C+VD+ RAGRLDE
Sbjct: 520 GVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDE 579
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
AY I +P EPT++ WGALL AC +NV+L ++AA KLF++EP N GNYV L NI +
Sbjct: 580 AYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAA 639
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQV 451
W + ++R +M++ G+ K PG S +++
Sbjct: 640 LGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 183/399 (45%), Gaps = 42/399 (10%)
Query: 14 AYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK--PNA 71
Y C I AR++F+++ ++S+ + YV GL +++F M GVK P+
Sbjct: 58 TYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDG 117
Query: 72 VTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDL 131
T + A ELK + G +HG +R + +V +AL++MY V+ AR VFD+
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 132 MPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES 191
M +RD +SWN +++ Y+ N L +F M E V D A
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHA------------------ 219
Query: 192 LEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYM 250
TI S+LP C L+ L MG+ VH R+GD + ALV M
Sbjct: 220 -----------------TIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNM 262
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTF 310
Y KC ++ +R VFD M ++DV+ W MI G+ + AL L M GV+PN+VT
Sbjct: 263 YLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTI 322
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
++S C + V++G + + V D + ++ ++++ R+D ++
Sbjct: 323 ASLVSVCGDALKVNDG-KCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 371 LEPTASAWGALLGACRVFKNVELAKIAAKKLF--DIEPN 407
T W A++ C + V A K++ D+EPN
Sbjct: 382 KYHTG-PWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 174/384 (45%), Gaps = 42/384 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D ++ NAL+ Y +E AR VFD + RDV+SW ++ S Y G L +F M
Sbjct: 151 DKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMV 210
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
V + T+ S+LP C LKDL G+ +H + + + V +ALV+MY +C +
Sbjct: 211 NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMD 270
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
EAR VFD M RD ++W ++ Y + + E L L M EGV
Sbjct: 271 EARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGV--------------- 315
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
+PN +TI+S++ C + GK +H + +R ++ D+
Sbjct: 316 --------------------RPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDII 355
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
T+L+ MYAKC ++L VF K W+ +I + +AL LF+ M R
Sbjct: 356 IETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED 415
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP-DANHYSCMVDVFSRAGRLDE 361
V+PN T +L + + + + I + + + DA + +V V+S+ G L+
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA--TGLVHVYSKCGTLES 473
Query: 362 AYKF---IQRMPLEPTASAWGALL 382
A+K IQ WGAL+
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALI 497
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 99/200 (49%), Gaps = 4/200 (2%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+ + +LI Y KCK ++ RVF W+++ + V L L +F M
Sbjct: 352 SDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRM 411
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
V+PN T++S+LPA + L DL IH + + G + ++ + LV +Y++C ++
Sbjct: 412 RREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTL 471
Query: 123 KEARAVFDLMPH----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
+ A +F+ + +D V W +++ Y + + L +F M R GV ++ T+ +
Sbjct: 472 ESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSA 531
Query: 179 IGGCMENGQTEESLEMLRKM 198
+ C +G EE L + R M
Sbjct: 532 LNACSHSGLVEEGLTLFRFM 551
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 186/583 (31%), Positives = 299/583 (51%), Gaps = 38/583 (6%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M D +I AY ++ A +F ++ ++ +++ +L + + G + L +F
Sbjct: 347 MAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFT 406
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M GV+ +++S + AC + + + IHGF ++ G N + +AL+ M RC
Sbjct: 407 DMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE 466
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ +A +FD P + + KAT ++IG
Sbjct: 467 RMADAEEMFDQWP--------------------------------SNLDSSKAT-TSIIG 493
Query: 181 GCMENGQTEESLEML-RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RI 238
G NG ++++ + R + + +E++++ IL C L MG ++HCY L+
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYF 553
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
D+S +L+ MYAKC D + + +F+ M + DV++WN++I + NG EAL L+ M
Sbjct: 554 SDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM 613
Query: 299 LRSGVKPNSVTFTGVLSGC--SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+KP+ +T T V+S + S + +F SM + +EP HY+ V V
Sbjct: 614 NEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHW 673
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
G L+EA I MP++P S ALL +CR+ N +AK AK + +P P Y+
Sbjct: 674 GLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKS 733
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
NI ++ W + IR M++RG K P SW+ N++H+F D S+ IY L+
Sbjct: 734 NIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLE 793
Query: 477 ELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQ-SSIRVFKNL 535
L + GY+P+T+YVLQ+VD+ K L +HS KLAV +GIL+ N + +RV KN+
Sbjct: 794 ILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNV 853
Query: 536 RICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+CGDCH KY+S VV I++RDS FHHF NG CSC+DLW
Sbjct: 854 MLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 152/334 (45%), Gaps = 48/334 (14%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
L NALI Y K A VF L VVS+T+L S + L + L +F M G
Sbjct: 116 LGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAG 175
Query: 67 -VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR--CLSVK 123
V+PN T +IL AC + + G IHG V+ G + +VFV ++L+S+Y + S
Sbjct: 176 LVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCD 235
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR-EGVKADKATWNAVIGGC 182
+ +FD +P RD SWN V+++ + K LF M+R EG D
Sbjct: 236 DVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDS---------- 285
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG--- 239
T+S++L +C+ L G+E+H G RIG
Sbjct: 286 -------------------------FTLSTLLSSCTDSSVLLRGRELH--GRAIRIGLMQ 318
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+LS AL+ Y+K D+ ++++MM +D V + MI A G A+ +F N+
Sbjct: 319 ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV- 377
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
+ N++T+ +++G + + L++F M
Sbjct: 378 ---TEKNTITYNALMAGFCRNGHGLKALKLFTDM 408
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 322 bits (824), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 278/490 (56%), Gaps = 13/490 (2%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D F+ LI ++ A VF + +V +T++ +V+ G G++++H M
Sbjct: 60 DAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMI 119
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
N V P+ ++S+L AC DL + IH ++ G + V ++ +Y + +
Sbjct: 120 HNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELV 175
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVK-ADKATWNAVIGGC 182
A+ +FD MP RD V+ ++ Y ++ L LF + VK D W A+I G
Sbjct: 176 NAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF-----QDVKIKDTVCWTAMIDGL 230
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+ N + ++LE+ R+MQ NE T +L ACS L +L +G+ VH + R+ +LS
Sbjct: 231 VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRM-ELS 289
Query: 243 STT--ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ AL+ MY++C D+N +R VF +M KDV+++NTMI AMHG EA+ F +M+
Sbjct: 290 NFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVN 349
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G +PN VT +L+ CSH L+D GL++FNSM R VEP HY C+VD+ R GRL+
Sbjct: 350 RGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLE 409
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EAY+FI+ +P+EP G LL AC++ N+EL + AK+LF+ E + G YV L N+
Sbjct: 410 EAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYA 469
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
S+ W E+++IR M+D GI K PGCS ++V N++H F+VGD ++ + IY+ L EL +
Sbjct: 470 SSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNR 529
Query: 481 KMKLAGYKPD 490
++ + D
Sbjct: 530 ILRFKENQID 539
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 197/593 (33%), Positives = 314/593 (52%), Gaps = 58/593 (9%)
Query: 5 VFLSNALIHAYGKCK---CIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
++++NA+I YG+C A VF+ + +++V+W S+ + + C L ++ + +F
Sbjct: 192 IYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMR 251
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKA------IHGFAVRHGMVENVFVCSALVSM 115
M +GV + T+ +I + + DL + +H V+ G+V V +AL+ +
Sbjct: 252 MHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKV 311
Query: 116 YARCLS-VKEARAVFDLMPH-RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKA 173
Y+ L + +F M H RD V+WNG++TA F + E+ + LF
Sbjct: 312 YSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITA-FAVYDPERAIHLF------------- 357
Query: 174 TWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYG 233
GQ +++ P+ T SS+L AC+ L + R +H
Sbjct: 358 ------------GQ----------LRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395
Query: 234 LRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
++ + D +L++ YAKC L+L VFD M +DVV+WN+M+ A ++HG L
Sbjct: 396 IKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSIL 455
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
+F+ M + P+S TF +LS CSH+ V+EGL+IF SM P NHY+C++D+
Sbjct: 456 PVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDM 512
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD-IEPNNPGN 411
SRA R EA + I++MP++P A W ALLG+CR N L K+AA KL + +EP N +
Sbjct: 513 LSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMS 572
Query: 412 YVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKI 471
Y+ + NI + ++EA+ M+ + K P SW ++GN+VH F G R + +
Sbjct: 573 YIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAV 632
Query: 472 YEFLDELGQKMKLAGYKPDTDYV-LQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSS-- 528
Y L L +K GY P+ D+E++ ++L +HSEKLA+AF ++ S
Sbjct: 633 YRELKRLISWLKEMGYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCG 692
Query: 529 ---IRVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
I++ KN RIC DCHN +K S ++G I++RDS RFHHFK+ +CSC D W
Sbjct: 693 VNLIQIMKNTRICIDCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 114/250 (45%), Gaps = 50/250 (20%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMV--ENVFVCSALVSMYARCLSVKEARAVFDLM 132
+++ AC+E ++L G +H + H +NV + + L++MYA+C ++ AR VFD M
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P R+ VSW ++T Y ++G LFS M + C
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSM---------------LSHCF--------- 158
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVY 249
PNE T+SS+L +C GK+VH GL ++G + A++
Sbjct: 159 ------------PNEFTLSSVLTSC----RYEPGKQVH--GLALKLGLHCSIYVANAVIS 200
Query: 250 MYAKCSDLNLSR---NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
MY +C D + VF+ + K++V WN+MI A GK+A+ +F M GV +
Sbjct: 201 MYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFD 260
Query: 307 SVTFTGVLSG 316
T + S
Sbjct: 261 RATLLNICSS 270
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+D L+N+LIHAY KC ++ RVFDD+ RDVVSW S+ Y G L +F +M
Sbjct: 402 ADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE--------NVFVCSALVS 114
N P++ T ++L ACS ++G+ G + M E N + C ++
Sbjct: 462 DIN---PDSATFIALLSACS-----HAGRVEEGLRIFRSMFEKPETLPQLNHYAC--VID 511
Query: 115 MYARCLSVKEARAVFDLMP-HRDAVSWNGVL 144
M +R EA V MP DAV W +L
Sbjct: 512 MLSRAERFAEAEEVIKQMPMDPDAVVWIALL 542
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 168/482 (34%), Positives = 268/482 (55%), Gaps = 40/482 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLP---RQGLA 57
+ +D +++N+LI Y KC C+ AR+VFD DVV + ++ Y G + L
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 58 IFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
IF +M + ++P+ +T S+L A + L L K IHG ++G+ ++F SAL+ +Y+
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYS 500
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
C +K++R VFD M +D V WN+
Sbjct: 501 NCYCLKDSRLVFDEMKVKDLV-----------------------------------IWNS 525
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR 237
+ G ++ + EE+L + ++Q +P+E T ++++ A L S+++G+E HC L+
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 238 IG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+ + T AL+ MYAKC + FD +DVV WN++I + A HG GK+AL + E
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
M+ G++PN +TF GVLS CSH+ LV++GL+ F M R +EP+ HY CMV + RA
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRA 704
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
GRL++A + I++MP +P A W +LL C NVELA+ AA+ +P + G++ L
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
NI S +W+EA ++R MK G+ K PG SW+ + VH F+ D+S+ +++IYE LD
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Query: 477 EL 478
+L
Sbjct: 825 DL 826
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/466 (26%), Positives = 215/466 (46%), Gaps = 73/466 (15%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L N LI +Y KC + A ++F+ + ++++SWT+L S Y L ++ + +F M
Sbjct: 283 DASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS 342
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+KP+ SSIL +C+ L L G +H + ++ + + +V ++L+ MYA+C +
Sbjct: 343 KFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLT 402
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+AR VFD+ D V +N ++ Y SR G + W
Sbjct: 403 DARKVFDIFAAADVVLFNAMIEGY----------------SRLGTQ-----W-------- 433
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---D 240
+ E+L + R M+ +P+ +T S+L A + L SL + K++H GL + G D
Sbjct: 434 ---ELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH--GLMFKYGLNLD 488
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ + +AL+ +Y+ C L SR VFD M KD+V WN+M +EAL LF +
Sbjct: 489 IFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQL 548
Query: 301 SGVKPNSVTFTGVLSGCS-----------HSRLVDEGLQ----IFNSM------------ 333
S +P+ TF +++ H +L+ GL+ I N++
Sbjct: 549 SRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 334 ---GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRV 387
D D ++ ++ ++ G +A + +++M +EP + +L AC
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 388 FKNVE--LAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQI 431
VE L + F IEP +YV + ++L A ++A ++
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETE-HYVCMVSLLGRAGRLNKAREL 713
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 172/355 (48%), Gaps = 40/355 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV++ LI Y K I+ AR VFD L + V+WT++ S V G L +F+++
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLM 241
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ V P+ +S++L ACS L L GK IH +R+G+ + + + L+ Y +C V
Sbjct: 242 EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVI 301
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +F+ MP+++ +SW +L+ Y N +++ + LF+ MS+ G+
Sbjct: 302 AAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL--------------- 346
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
KP+ SSIL +C+ L +L G +VH Y ++ +G D
Sbjct: 347 --------------------KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG---KEALLLFENML 299
T +L+ MYAKC L +R VFD+ DVV +N MI + G EAL +F +M
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
++P+ +TF +L + + QI M + L D S ++DV+S
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL-NLDIFAGSALIDVYS 500
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 181/368 (49%), Gaps = 46/368 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D +LSN LI+ Y + + AR+VF+ + R++VSW+++ S + G+ + L +F E
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEF- 136
Query: 64 WNGVK--PNAVTVSSILPACSELKDLNSGK----AIHGFAVRHGMVENVFVCSALVSMYA 117
W K PN +SS + ACS L G+ + F V+ G +V+V + L+ Y
Sbjct: 137 WRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYL 194
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
+ ++ AR VFD +P + V+W
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTW-----------------------------------TT 219
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR 237
+I GC++ G++ SL++ ++ + P+ +S++L ACSIL L GK++H + LR+
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 238 IG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+ D S L+ Y KC + + +F+ MP K++++W T++ + KEA+ LF
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFT 339
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+M + G+KP+ + +L+ C+ + G Q+ + +L D+ + ++D++++
Sbjct: 340 SMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN-DSYVTNSLIDMYAKC 398
Query: 357 GRLDEAYK 364
L +A K
Sbjct: 399 DCLTDARK 406
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 133/304 (43%), Gaps = 41/304 (13%)
Query: 87 LNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTA 146
L+ +HG + G+ + ++ + L+++Y+R + AR VF+ MP R+ VSW+ +++A
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 147 YFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM-GFKP 205
C +G EESL + + + P
Sbjct: 120 -----------------------------------CNHHGIYEESLVVFLEFWRTRKDSP 144
Query: 206 NEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRN 262
NE +SS + ACS L+ + G D+ T L+ Y K +++ +R
Sbjct: 145 NEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARL 204
Query: 263 VFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
VFD +P+K V W TMI G +L LF ++ V P+ + VLS CS
Sbjct: 205 VFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPF 264
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
++ G QI + R L E DA+ + ++D + + GR+ A+K MP + S W LL
Sbjct: 265 LEGGKQIHAHILRYGL-EMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS-WTTLL 322
Query: 383 GACR 386
+
Sbjct: 323 SGYK 326
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 266/472 (56%), Gaps = 8/472 (1%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
AR++FD + L Y P + + +++ + ++G++P+ T + I A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
+ +H R G + F C+ L++ YA+ ++ AR VFD M RD WN +
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK-MG 202
+T Y + + + LF M R+ V +W VI G +NG E+L+M M+K
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEKDKS 210
Query: 203 FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLSR 261
KPN IT+ S+LPAC+ L L +G+ + Y + D + A + MY+KC +++++
Sbjct: 211 VKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAK 270
Query: 262 NVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHS 320
+F+ + ++++ +WN+MI + A HG EAL LF MLR G KP++VTF G+L C H
Sbjct: 271 RLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHG 330
Query: 321 RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGA 380
+V +G ++F SM H + P HY CM+D+ R G+L EAY I+ MP++P A WG
Sbjct: 331 GMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 381 LLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
LLGAC NVE+A+IA++ LF +EP NPGN V + NI + + W ++R LMK +
Sbjct: 391 LLGACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETM 450
Query: 441 TKTPGCSW-LQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDT 491
TK G S+ ++VG VH F V D+S+ S +IY+ L+E+ ++MKL + D+
Sbjct: 451 TKAAGYSYFVEVGVDVHKFTVEDKSHPRSYEIYQVLEEIFRRMKLEKSRFDS 502
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 67/332 (20%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD F LI AY K + ARRVFD++ RDV W ++ + Y G + + +F M
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 63 ------GW---------NG-----------------VKPNAVTVSSILPACSELKDLNSG 90
W NG VKPN +TV S+LPAC+ L +L G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF-DLMPHRDAVSWNGVLTAYFT 149
+ + G+A +G +N++VC+A + MY++C + A+ +F +L R+ SWN ++ + T
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
+ ++++ L LF++M REG K D T+ ++ C+ G + E+ + M+
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSME---------- 344
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP- 268
E ++ ++ YG ++ + + L + ++ MP
Sbjct: 345 -----------EVHKISPKLEHYG------------CMIDLLGRVGKLQEAYDLIKTMPM 381
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
K D V W T++ A + HGN + A + E + +
Sbjct: 382 KPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/485 (34%), Positives = 272/485 (56%), Gaps = 18/485 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ DV ++NA I YGKC+ + A RVFD++ RD VSW ++ + + G + L +F
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M + ++P+ T SIL AC+ L G IH V+ GM N V +L+ MY++C
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCG 531
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++EA + R VS T +E EK M + ++ +WN++I
Sbjct: 532 MIEEAEKIHSRFFQRANVSG--------TMEELEK-------MHNKRLQEMCVSWNSIIS 576
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-G 239
G + Q+E++ + +M +MG P++ T +++L C+ L S +GK++H ++ +
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ + LV MY+KC DL+ SR +F+ ++D V WN MI A HG G+EA+ LFE M+
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+KPN VTF +L C+H L+D+GL+ F M RD+ ++P HYS MVD+ ++G++
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFK-NVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
A + I+ MP E W LLG C + + NVE+A+ A L ++P + Y L N+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
A +W + S +R M+ + K PGCSW+++ + +H F+VGD+++ ++IYE L +
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLI 876
Query: 479 GQKMK 483
+MK
Sbjct: 877 YSEMK 881
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 187/382 (48%), Gaps = 38/382 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV N +I+ Y K + A F+ + RDVVSW S+ S Y+ G + + +F +MG
Sbjct: 113 DVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMG 172
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G++ + T + IL CS L+D + G IHG VR G +V SAL+ MYA+
Sbjct: 173 REGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFV 232
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
E+ VF +P +++VS W+A+I GC+
Sbjct: 233 ESLRVFQGIPEKNSVS-----------------------------------WSAIIAGCV 257
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
+N +L+ ++MQK+ ++ +S+L +C+ L LR+G ++H + L+ D
Sbjct: 258 QNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGI 317
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
TA + MYAKC ++ ++ +FD + ++N MI + +G +ALLLF ++ SG
Sbjct: 318 VRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG 377
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ + ++ +GV C+ + + EGLQI+ + L D + +D++ + L EA
Sbjct: 378 LGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL-SLDVCVANAAIDMYGKCQALAEA 436
Query: 363 YKFIQRMPLEPTASAWGALLGA 384
++ M A +W A++ A
Sbjct: 437 FRVFDEMR-RRDAVSWNAIIAA 457
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 185/377 (49%), Gaps = 42/377 (11%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+DV ++AL+ Y K K + RVF + ++ VSW+++ + V L L F EM
Sbjct: 213 TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM 272
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ +S+L +C+ L +L G +H A++ + V +A + MYA+C ++
Sbjct: 273 QKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNM 332
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++A+ +FD + + S+N ++T Y + K L LF R+ G
Sbjct: 333 QDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSG--------------- 377
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
+GF +EI++S + AC++++ L G +++ ++ + D+
Sbjct: 378 ------------------LGF--DEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
A + MY KC L + VFD M ++D V+WN +I A+ +G G E L LF +MLRS
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
++P+ TF +L C+ L G++I +S+ + + + S ++D++S+ G ++E
Sbjct: 478 RIEPDEFTFGSILKACTGGSL-GYGMEIHSSIVKSGMASNSSVGCS-LIDMYSKCGMIEE 535
Query: 362 AYK----FIQRMPLEPT 374
A K F QR + T
Sbjct: 536 AEKIHSRFFQRANVSGT 552
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 199/420 (47%), Gaps = 23/420 (5%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+D + A + Y KC ++ A+ +FD+ + S+ ++ + Y + L +FH
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
+ +G+ + +++S + AC+ +K L+ G I+G A++ + +V V +A + MY +C +
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ EA VFD M RDAVSWN ++ A+ N + + L LF M R ++ D+ T+ +++
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
C G +E+ + K G N S++ S + +++H R
Sbjct: 493 CT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS-----RFFQR 546
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
++ + + K + L ++ V+WN++I M ++A +LF M+
Sbjct: 547 ANVSGTMEELEKMHNKRL---------QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G+ P+ T+ VL C++ G QI + + L + D S +VD++S+ G L +
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKEL-QSDVYICSTLVDMYSKCGDLHD 656
Query: 362 AYKFIQRMPLEPTASAWGALL-GACRVFKNVELAKIAAKKLFD-IEPNNPGNYVSLFNIL 419
+ ++ L W A++ G K E ++ + + + I+P N+V+ +IL
Sbjct: 657 SRLMFEK-SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKP----NHVTFISIL 711
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 133/294 (45%), Gaps = 10/294 (3%)
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
R VS+N LT + + + F+ + ++ V C + G E +
Sbjct: 12 RSVVSFNRCLTEKISYRRV-PSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKC 254
M GF+P ++ +L + V + + D+ S ++ Y+K
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFD---KMPLRDVVSWNKMINGYSKS 127
Query: 255 SDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVL 314
+D+ + + F+MMP +DVV+WN+M+ +G +++ +F +M R G++ + TF +L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 315 SGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPT 374
CS G+QI + R + D S ++D++++ R E+ + Q +P E
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVG-CDTDVVAASALLDMYAKGKRFVESLRVFQGIP-EKN 245
Query: 375 ASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF-NILVSAKLWSE 427
+ +W A++ C V N L +A K +++ N G S++ ++L S SE
Sbjct: 246 SVSWSAIIAGC-VQNN--LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 170/494 (34%), Positives = 268/494 (54%), Gaps = 47/494 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ DV ++++LI Y KC + AR++FD++ RD VSW S+ S Y G + + +F
Sbjct: 163 LERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M G +P+ T+ S+L ACS L DL +G+ + A+ + + F+ S L+SMY +C
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG 282
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ AR VF+ M +K D+ W A+I
Sbjct: 283 DLDSARRVFNQM-----------------------------------IKKDRVAWTAMIT 307
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYG----LRH 236
+NG++ E+ ++ +M+K G P+ T+S++L AC + +L +GK++ + L+H
Sbjct: 308 VYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH 367
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
I T LV MY KC + + VF+ MP K+ WN MI A A G+ KEALLLF+
Sbjct: 368 NI---YVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
M V P+ +TF GVLS C H+ LV +G + F+ M + P HY+ ++D+ SRA
Sbjct: 425 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDI-EPNNPGNYVSL 415
G LDEA++F++R P +P A+LGAC K+V + + A + L ++ E N GNYV
Sbjct: 482 GMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVIS 541
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVG-DRSNTGSDKIYEF 474
N+L K+W E++++R LM+DRG+ KTPGCSW+++ + F+ G D G +
Sbjct: 542 SNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSL 601
Query: 475 LDELGQKMKLAGYK 488
D L ++MK Y+
Sbjct: 602 FDLLVEEMKRERYE 615
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/336 (30%), Positives = 170/336 (50%), Gaps = 48/336 (14%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
L+++ M ++G+KP+ T + + AC++L+++ G+++H + G+ +V + +L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 115 MYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
MYA+C V AR +FD + RD VSWN +++ Y + + LF +M EG + D+ T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
+ S+L ACS L LR G+ + +
Sbjct: 236 -----------------------------------LVSMLGACSHLGDLRTGRLLEEMAI 260
Query: 235 RHRIGDLSS--TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
+IG LS+ + L+ MY KC DL+ +R VF+ M KKD VAW MI + +G EA
Sbjct: 261 TKKIG-LSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAF 319
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANH----YSC 348
LF M ++GV P++ T + VLS C ++ G QI H E H +
Sbjct: 320 KLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQI-----ETHASELSLQHNIYVATG 374
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+VD++ + GR++EA + + MP++ A+ W A++ A
Sbjct: 375 LVDMYGKCGRVEEALRVFEAMPVKNEAT-WNAMITA 409
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 50/335 (14%)
Query: 99 RHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLA 158
R G +E F+ + +C+SV + R + M N ++ ++
Sbjct: 32 RRGDLERDFLF-----LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFNYSSF 86
Query: 159 LFSRMSREGVKADKATWNAVIGGCMEN-GQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
LFS + + ++N +I G E +L + R+M+ G KP++ T + + AC
Sbjct: 87 LFSVTE----EPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIAC 142
Query: 218 SILESLRMGKEVHC----YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV 273
+ LE + +G+ VH GL D+ +L+ MYAKC + +R +FD + ++D V
Sbjct: 143 AKLEEIGVGRSVHSSLFKVGLER---DVHINHSLIMMYAKCGQVGYARKLFDEITERDTV 199
Query: 274 AWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH------SRLVDE-- 325
+WN+MI + G K+A+ LF M G +P+ T +L CSH RL++E
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 326 -----GLQIF---------------NSMGR--DHLVEPDANHYSCMVDVFSRAGRLDEAY 363
GL F +S R + +++ D ++ M+ V+S+ G+ EA+
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAF 319
Query: 364 KF---IQRMPLEPTASAWGALLGACRVFKNVELAK 395
K +++ + P A +L AC +EL K
Sbjct: 320 KLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGK 354
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 284/539 (52%), Gaps = 80/539 (14%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S +++ NALI Y + + + ARR+FD + RD VSW ++ +CY + G+ + +F +M
Sbjct: 177 SSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKM 236
Query: 63 GWNGVKPNAVTVSSI-----------------------------------LPACSELKDL 87
++GV+ + +T + I L ACS + +
Sbjct: 237 WFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAI 296
Query: 88 NSGKAIHGFAVR--HGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLT 145
GK IHG A+ + ++NV + L++MY++C ++ A VF
Sbjct: 297 RLGKEIHGLAIHSSYDGIDNVR--NTLITMYSKCKDLRHALIVF---------------- 338
Query: 146 AYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKP 205
R+ + TWN++I G + ++EE+ +LR+M GF+P
Sbjct: 339 -------------------RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQP 379
Query: 206 NEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLSST-TALVYMYAKCSDLNLSRNV 263
N IT++SILP C+ + +L+ GKE HCY LR + D + +LV +YAK + ++ V
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Query: 264 FDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLV 323
D+M K+D V + ++I G G AL LF+ M RSG+KP+ VT VLS CSHS+LV
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 324 DEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLG 383
EG ++F M ++ + P H+SCMVD++ RAG L +A I MP +P+ + W LL
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 384 ACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKT 443
AC + N ++ K AA+KL +++P NPG YV + N+ +A WS+ +++R +M+D G+ K
Sbjct: 560 ACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Query: 444 PGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKL-AGYKPDTDYVLQDVDQE 501
PGC+W+ + F VGD S+ + Y LD L Q MK AGY + +Q D+E
Sbjct: 620 PGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYAINK---VQSSDEE 675
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 168/327 (51%), Gaps = 1/327 (0%)
Query: 37 VSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGF 96
+ W L + Y L + +A + M G++P+A T S+L AC E D+ G+ +HG
Sbjct: 110 LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGS 169
Query: 97 AVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKG 156
+++VC+AL+SMY R ++ AR +FD M RDAVSWN V+ Y + + +
Sbjct: 170 IEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEA 229
Query: 157 LALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPA 216
LF +M GV+ TWN + GGC++ G +L ++ +M+ + + + L A
Sbjct: 230 FELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKA 289
Query: 217 CSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
CS++ ++R+GKE+H + + + L+ MY+KC DL + VF + + W
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTW 349
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
N++I A +EA L ML +G +PNS+T +L C+ + G + + R
Sbjct: 350 NSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILR 409
Query: 336 DHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ ++ +VDV++++G++ A
Sbjct: 410 RKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 34/245 (13%)
Query: 73 TVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM 132
+ +S+L AC +++ +G +H + G+ + + LV+ Y+ EA+++ +
Sbjct: 45 SAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENS 104
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
+ WN ++ +Y N+ +E+ +A + RM +G++ D T+ +V+ C E
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGET------- 157
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
+ + SI EV Y L AL+ MY
Sbjct: 158 --------LDVAFGRVVHGSI--------------EVSSYK-----SSLYVCNALISMYK 190
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ ++ ++R +FD M ++D V+WN +I A G EA LF+ M SGV+ + +T+
Sbjct: 191 RFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNI 250
Query: 313 VLSGC 317
+ GC
Sbjct: 251 ISGGC 255
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 164/417 (39%), Positives = 246/417 (58%), Gaps = 8/417 (1%)
Query: 36 VVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKP-NAVTVSSILPACSELKDLNSGKAIH 94
++S T S Y N G Q L +F +M + P +A S L +C+ G ++H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE 154
+V+ + N FV AL+ MY +CLSV AR +FD +P R+AV WN +++ Y + +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCM--ENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ + L+ M V +++++NA+I G + E+G + ++E RKM + FKPN IT+ +
Sbjct: 132 EAVELYEAMD---VMPNESSFNAIIKGLVGTEDG-SYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIGDLSS-TTALVYMYAKCSDLNLSRNVFDMMPKKD 271
++ ACS + + R+ KE+H Y R+ I + LV Y +C + + VFD M +D
Sbjct: 188 LVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRD 247
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
VVAW+++I A A+HG+ + AL F+ M + V P+ + F VL CSH+ L DE L F
Sbjct: 248 VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFK 307
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNV 391
M D+ + +HYSC+VDV SR GR +EAYK IQ MP +PTA WGALLGACR + +
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEI 367
Query: 392 ELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSW 448
ELA+IAA++L +EP NP NYV L I +S EA ++R+ MK+ G+ +PG SW
Sbjct: 368 ELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 33/230 (14%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S+ F+ AL+ YGKC + AR++FD++ R+ V W ++ S Y +CG ++ + ++ M
Sbjct: 81 SNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM 140
Query: 63 -------GWNGV--------------------------KPNAVTVSSILPACSELKDLNS 89
+N + KPN +T+ +++ ACS +
Sbjct: 141 DVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRL 200
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
K IH +A R+ + + + S LV Y RC S+ + VFD M RD V+W+ +++AY
Sbjct: 201 IKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYAL 260
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ 199
+ + E L F M V D + V+ C G +E+L ++MQ
Sbjct: 261 HGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 11/204 (5%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
L + L+ AYG+C I + VFD + RDVV+W+SL S Y G L F EM
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK 278
Query: 67 VKPNAVTVSSILPACSE--LKD--LNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
V P+ + ++L ACS L D L K + G +G+ + S LV + +R
Sbjct: 279 VTPDDIAFLNVLKACSHAGLADEALVYFKRMQG---DYGLRASKDHYSCLVDVLSRVGRF 335
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+EA V MP + A +W +L A E E LA + V+ + ++G
Sbjct: 336 EEAYKVIQAMPEKPTAKTWGALLGACRNYGEIE--LAEIAARELLMVEPENPANYVLLGK 393
Query: 182 C-MENGQTEESLEMLRKMQKMGFK 204
M G+ EE+ + KM++ G K
Sbjct: 394 IYMSVGRQEEAERLRLKMKESGVK 417
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/514 (32%), Positives = 272/514 (52%), Gaps = 39/514 (7%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M D L +L++ Y K IE A VFD + +DVV+W + S YV GL + +
Sbjct: 305 MELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQ 364
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M +K + VT+++++ A + ++L GK + + +RH ++ + S ++ MYA+C
Sbjct: 365 LMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S+ +A+ VFD +D + WN +L AY + + L LF M EGV + TWN +I
Sbjct: 425 SIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIIL 484
Query: 181 GCMENGQTEESLEM-----------------------------------LRKMQKMGFKP 205
+ NGQ +E+ +M LRKMQ+ G +P
Sbjct: 485 SLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRP 544
Query: 206 NEITISSILPACSILESLRMGKEVHCYGLR--HRIGDLSSTTALVYMYAKCSDLNLSRNV 263
N +I+ L AC+ L SL +G+ +H Y +R +S T+LV MYAKC D+N + V
Sbjct: 545 NAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKV 604
Query: 264 FDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLV 323
F ++ N MI A A++GN KEA+ L+ ++ G+KP+++T T VLS C+H+ +
Sbjct: 605 FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDI 664
Query: 324 DEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLG 383
++ ++IF + ++P HY MVD+ + AG ++A + I+ MP +P A +L+
Sbjct: 665 NQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVA 724
Query: 384 ACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKT 443
+C + EL ++KL + EP N GNYV++ N W E ++R +MK +G+ K
Sbjct: 725 SCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK 784
Query: 444 PGCSWLQVGNR--VHTFVVGDRSNTGSDKIYEFL 475
PGCSW+Q+ VH FV D+++T ++I L
Sbjct: 785 PGCSWIQITGEEGVHVFVANDKTHTRINEIQMML 818
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 197/385 (51%), Gaps = 40/385 (10%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
VF++++L YGKC ++ A +VFD++ R+ V+W +L YV G + + +F +M
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GV+P VTVS+ L A + + + GK H A+ +GM + + ++L++ Y + ++
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A VFD M +D V+WN +++ Y ++
Sbjct: 328 AEMVFDRMFEKDVVTWNLIISGY-----------------------------------VQ 352
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSS 243
G E+++ M + M+ K + +T+++++ A + E+L++GKEV CY +RH D+
Sbjct: 353 QGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVL 412
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+ ++ MYAKC + ++ VFD +KD++ WNT++ A A G EAL LF M GV
Sbjct: 413 ASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGV 472
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
PN +T+ ++ + VDE +F M ++ P+ ++ M++ + G +EA
Sbjct: 473 PPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGII-PNLISWTTMMNGMVQNGCSEEAI 531
Query: 364 KFIQRMP---LEPTASAWGALLGAC 385
F+++M L P A + L AC
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSAC 556
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 242/555 (43%), Gaps = 73/555 (13%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++ L+ Y KC +E A +F L R+V SW ++ GL L F EM N
Sbjct: 108 YIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLEN 167
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+ P+ V ++ AC LK G+ +HG+ V+ G+ + VFV S+L MY +C + +A
Sbjct: 168 EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
VFD +P R+AV+WN ++ Y N + E+ + LFS M ++GV
Sbjct: 228 SKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGV----------------- 270
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSST 244
+P +T+S+ L A + + + GK+ H + + + D
Sbjct: 271 ------------------EPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
T+L+ Y K + + VFD M +KDVV WN +I G ++A+ + + M +K
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
+ VT ++S + + + G ++ R H E D S ++D++++ G + +A K
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKCGSIVDAKK 431
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
+E W LL A + L+ A + + ++ V +N+++ + L
Sbjct: 432 VFDS-TVEKDLILWNTLLAA---YAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 425 WS----EASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
+ EA + + M+ GI SW + N G N S++ FL +
Sbjct: 488 RNGQVDEAKDMFLQMQSSGIIPNL-ISWTTMMN-------GMVQNGCSEEAILFL----R 535
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAV-----AFGILNLNGQSSIRVFKNL 535
KM+ +G +P+ + A S C H L + + I NL S + + +L
Sbjct: 536 KMQESGLRPNAFSI-------TVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSL 588
Query: 536 ----RICGDCHNAIK 546
CGD + A K
Sbjct: 589 VDMYAKCGDINKAEK 603
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 156/341 (45%), Gaps = 50/341 (14%)
Query: 50 GLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG--MVENVF 107
G ++ L++ EM + ++ IL C +DL++GK IH +++G N +
Sbjct: 49 GEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEY 108
Query: 108 VCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG 167
+ + LV YA+C +++ A +F + R+ SW ++ G
Sbjct: 109 IETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII----------------------G 146
Query: 168 VKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGK 227
VK IG C E +L +M + P+ + ++ AC L+ R G+
Sbjct: 147 VKCR-------IGLC------EGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGR 193
Query: 228 EVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHG 286
VH Y ++ + D + ++L MY KC L+ + VFD +P ++ VAWN +++ +G
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 287 NGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ-----IFNSMGRDHLVEP 341
+EA+ LF +M + GV+P VT + LS ++ V+EG Q I N M D+++
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG- 312
Query: 342 DANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+ +++ + + G ++ A RM E W ++
Sbjct: 313 -----TSLLNFYCKVGLIEYAEMVFDRM-FEKDVVTWNLII 347
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 10/219 (4%)
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
+NG+ +E+L ++ +M + IL C L GK++H L++ GD +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKN--GDFYA 104
Query: 244 -----TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
T LV YAKC L ++ +F + ++V +W +I G + AL+ F M
Sbjct: 105 RNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEM 164
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L + + P++ V C + G + + + L E S + D++ + G
Sbjct: 165 LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGL-EDCVFVASSLADMYGKCGV 223
Query: 359 LDEAYKFIQRMPLEPTASAWGALL-GACRVFKNVELAKI 396
LD+A K +P + A AW AL+ G + KN E ++
Sbjct: 224 LDDASKVFDEIP-DRNAVAWNALMVGYVQNGKNEEAIRL 261
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 258/474 (54%), Gaps = 35/474 (7%)
Query: 10 ALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKP 69
+L Y +C + ARRVFD + D SW + + N G + +++F +M +G P
Sbjct: 310 SLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIP 369
Query: 70 NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF 129
+A+++ S+L A ++ L+ G IH + ++ G + ++ VC++L++MY C + F
Sbjct: 370 DAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFC---SDLYCCF 426
Query: 130 DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
+L F N AD +WN ++ C+++ Q
Sbjct: 427 NLFED-------------FRNN------------------ADSVSWNTILTACLQHEQPV 455
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALV 248
E L + + M +P+ IT+ ++L C + SL++G +VHCY L+ + + L+
Sbjct: 456 EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLI 515
Query: 249 YMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSV 308
MYAKC L +R +FD M +DVV+W+T+I+ A G G+EAL+LF+ M +G++PN V
Sbjct: 516 DMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHV 575
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQR 368
TF GVL+ CSH LV+EGL+++ +M +H + P H SC+VD+ +RAGRL+EA +FI
Sbjct: 576 TFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDE 635
Query: 369 MPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEA 428
M LEP W LL AC+ NV LA+ AA+ + I+P N +V L ++ S+ W A
Sbjct: 636 MKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENA 695
Query: 429 SQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
+ +R MK + K PG SW+++ +++H F D + D IY L + +M
Sbjct: 696 ALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/459 (24%), Positives = 204/459 (44%), Gaps = 65/459 (14%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L+N ++ YGKC + AR VFD + R++VS+TS+ + Y G + + ++ +M
Sbjct: 101 DTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKML 160
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ P+ SI+ AC+ D+ GK +H ++ ++ +AL++MY R +
Sbjct: 161 QEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMS 220
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A VF +P +D +SW +++I G
Sbjct: 221 DASRVFYGIPMKDLISW-----------------------------------SSIIAGFS 245
Query: 184 ENGQTEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDL 241
+ G E+L L++M G F PNE S L ACS L G ++H ++ + G+
Sbjct: 246 QLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNA 305
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ +L MYA+C LN +R VFD + + D +WN +I A +G EA+ +F M S
Sbjct: 306 IAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSS 365
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G P++++ +L + + +G+QI + + + + D + ++ +++ L
Sbjct: 366 GFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL-ADLTVCNSLLTMYTFCSDLYC 424
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
+ + + +W +L AC ++ P + LF ++
Sbjct: 425 CFNLFEDFRNNADSVSWNTILTAC------------------LQHEQPVEMLRLFKLM-- 464
Query: 422 AKLWSEASQIRILMKD--RGITKTPGCSWLQVGNRVHTF 458
L SE I M + RG + S L++G++VH +
Sbjct: 465 --LVSECEPDHITMGNLLRGCVEI---SSLKLGSQVHCY 498
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 172/390 (44%), Gaps = 62/390 (15%)
Query: 73 TVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM 132
T S++ ACS + L G+ IH + + + + ++SMY +C S+++AR VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P R+ VS+ V+T Y N + + + L+ +M +E + D
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPD--------------------- 167
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIGDLSSTTALVYMY 251
+ SI+ AC+ + +GK++H ++ L + AL+ MY
Sbjct: 168 --------------QFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMY 213
Query: 252 AKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV-KPNSVTF 310
+ + ++ + VF +P KD+++W+++I + G EAL + ML GV PN F
Sbjct: 214 VRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIF 273
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
L CS D G QI + L +A + D+++R G L+ A + ++
Sbjct: 274 GSSLKACSSLLRPDYGSQIHGLCIKSELA-GNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 371 LEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQ 430
P ++W NV +A +A D VS+F+ + S+ +A
Sbjct: 333 -RPDTASW-----------NVIIAGLANNGYAD-------EAVSVFSQMRSSGFIPDAIS 373
Query: 431 IRILMKDRGITKTPGCSWLQVGNRVHTFVV 460
+R L+ + TK L G ++H++++
Sbjct: 374 LRSLLCAQ--TKPMA---LSQGMQIHSYII 398
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ + F+ N LI Y KC + ARR+FD + RDVVSW++L Y G + L +F
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFK 563
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHG-FAVRHGMVENVFVCSALVSMYARC 119
EM G++PN VT +L ACS + + G ++ HG+ CS +V + AR
Sbjct: 564 EMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARA 623
Query: 120 LSVKEARAVFDLMP-HRDAVSWNGVLTA 146
+ EA D M D V W +L+A
Sbjct: 624 GRLNEAERFIDEMKLEPDVVVWKTLLSA 651
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 12/200 (6%)
Query: 190 ESLEMLRKMQK-MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTAL 247
E+LE QK FK T S++ ACS SL G+++H + L D +
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 108
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ MY KC L +R VFD MP++++V++ ++I + +G G EA+ L+ ML+ + P+
Sbjct: 109 LSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQ 168
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSM----GRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
F ++ C+ S V G Q+ + HL+ +A ++ ++ R ++ +A
Sbjct: 169 FAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNA-----LIAMYVRFNQMSDAS 223
Query: 364 KFIQRMPLEPTASAWGALLG 383
+ +P++ S W +++
Sbjct: 224 RVFYGIPMKDLIS-WSSIIA 242
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 301 bits (770), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 164/482 (34%), Positives = 261/482 (54%), Gaps = 37/482 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D ++++AL+ YGKC C+E AR VF + + +V+W S+ YV G + + I + M
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G +P+ T++SIL ACS ++L GK IHG+ +R + +++V +L+ +Y +C
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A VF + +K +A +WN +I +
Sbjct: 362 LAETVFS---------------------KTQKDVA--------------ESWNVMISSYI 386
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
G +++E+ +M +G KP+ +T +S+LPACS L +L GK++H R+ D
Sbjct: 387 SVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDEL 446
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+AL+ MY+KC + + +F+ +PKKDVV+W MI A HG +EAL F+ M + G
Sbjct: 447 LLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG 506
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+KP+ VT VLS C H+ L+DEGL+ F+ M + +EP HYSCM+D+ RAGRL EA
Sbjct: 507 LKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEA 566
Query: 363 YKFIQRMP-LEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
Y+ IQ+ P A L AC + L A+ L + P++ Y+ LFN+ S
Sbjct: 567 YEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYAS 626
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
+ W A ++R+ MK+ G+ K PGCSW+++ ++V F DRS+ ++ +YE L L
Sbjct: 627 GESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYECLALLSGH 686
Query: 482 MK 483
M+
Sbjct: 687 ME 688
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 193/382 (50%), Gaps = 38/382 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV ++++L+ Y K E + +VFD++ RDV SW ++ SC+ G + L +F M
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G +PN+V+++ + ACS L L GK IH V+ G + +V SALV MY +C ++
Sbjct: 201 SSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLE 260
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR VF MP + V+WN ++ Y + + + + +RM EG +
Sbjct: 261 VAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTR-------------- 306
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
P++ T++SIL ACS +L GK +H Y +R + D+
Sbjct: 307 ---------------------PSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIY 345
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L+ +Y KC + NL+ VF K +WN MI + GN +A+ +++ M+ G
Sbjct: 346 VNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVG 405
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
VKP+ VTFT VL CS +++G QI S+ L E D S ++D++S+ G EA
Sbjct: 406 VKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRL-ETDELLLSALLDMYSKCGNEKEA 464
Query: 363 YKFIQRMPLEPTASAWGALLGA 384
++ +P + S W ++ A
Sbjct: 465 FRIFNSIPKKDVVS-WTVMISA 485
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 171/383 (44%), Gaps = 38/383 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL-VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
DV L +LI+ Y CK AR VF++ + DV W SL S Y + L +F +
Sbjct: 38 DVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRL 97
Query: 63 -GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
+ P++ T +++ A L G+ IH V+ G V +V V S+LV MYA+
Sbjct: 98 LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNL 157
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ + VFD MP RD SWN V++ ++ + E EK L LF RM G + + + I
Sbjct: 158 FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISA 217
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
C E E+ RK K GF+ +E
Sbjct: 218 CSRLLWLERGKEIHRKCVKKGFELDEYV-------------------------------- 245
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ALV MY KC L ++R VF MP+K +VAWN+MI G+ K + + M+
Sbjct: 246 --NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE 303
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G +P+ T T +L CS SR + G I + R +V D ++D++ + G +
Sbjct: 304 GTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRS-VVNADIYVNCSLIDLYFKCGEANL 362
Query: 362 AYKFIQRMPLEPTASAWGALLGA 384
A + + A +W ++ +
Sbjct: 363 AETVFSKTQ-KDVAESWNVMISS 384
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 1/206 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +D++++ +LI Y KC A VF SW + S Y++ G + + ++
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M GVKP+ VT +S+LPACS+L L GK IH + + + SAL+ MY++C
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCG 459
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ KEA +F+ +P +D VSW +++AY ++ + + L F M + G+K D T AV+
Sbjct: 460 NEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLS 519
Query: 181 GCMENGQTEESLEMLRKMQ-KMGFKP 205
C G +E L+ +M+ K G +P
Sbjct: 520 ACGHAGLIDEGLKFFSQMRSKYGIEP 545
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 270/541 (49%), Gaps = 63/541 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D+ ++ LI A C+ A RVF+ + +V SL + P Q +F
Sbjct: 47 LHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFS 106
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM G+ + T +L ACS L K +H + G+ +++V +AL+ Y+RC
Sbjct: 107 EMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCG 166
Query: 121 ---------------------------------SVKEARAVFDLMPHRDAVSWNGVLTAY 147
+++AR +FD MP RD +SWN +L Y
Sbjct: 167 GLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGY 226
Query: 148 FTNKEYEKGLALFSRM---------------SREG------VKADK--------ATWNAV 178
+E K LF +M S+ G V DK TW +
Sbjct: 227 ARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
I G E G +E+ ++ +M G K + + SIL AC+ L +G +H R +
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNL 346
Query: 239 GDLSST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
G + AL+ MYAKC +L + +VF+ +PKKD+V+WNTM+ +HG+GKEA+ LF
Sbjct: 347 GSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
M R G++P+ VTF VL C+H+ L+DEG+ F SM + + + P HY C+VD+ R G
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVG 466
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFN 417
RL EA K +Q MP+EP WGALLGACR+ V++AK L ++P +PGNY L N
Sbjct: 467 RLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSN 526
Query: 418 ILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDE 477
I +A+ W + IR MK G+ K G S +++ + +H F V D+S+ SD+IY+ L
Sbjct: 527 IYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGS 586
Query: 478 L 478
L
Sbjct: 587 L 587
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 158/371 (42%), Gaps = 74/371 (19%)
Query: 78 LPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDA 137
LP C+ +LN K +H +R + E++ + L+S + C A VF+ + +
Sbjct: 26 LPKCA---NLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 138 VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRK 197
N ++ A+ N + + +FS M R G+ AD T+ ++ C M
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 198 MQKMGFKPNEITISSILPAC-------------SILESLR----------MGKEVHCYGL 234
++K+G ++I + + L C + E + +G V L
Sbjct: 143 IEKLGLS-SDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGEL 201
Query: 235 R--HRI------GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHG 286
R R+ DL S ++ YA+C +++ + +F+ MP+++ V+W+TM++ + G
Sbjct: 202 RDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAG 261
Query: 287 NG---------------------------------KEALLLFENMLRSGVKPNSVTFTGV 313
+ KEA L + M+ SG+K ++ +
Sbjct: 262 DMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISI 321
Query: 314 LSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLDEAYKFIQRMPL 371
L+ C+ S L+ G++I + + R +L +N Y + ++D++++ G L +A+ +P
Sbjct: 322 LAACTESGLLSLGMRIHSILKRSNL---GSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 372 EPTASAWGALL 382
+ S W +L
Sbjct: 379 KDLVS-WNTML 388
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 164/498 (32%), Positives = 270/498 (54%), Gaps = 17/498 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ F+ ++ K + ++ A R+F+ + +V + S+ Y + L + I+
Sbjct: 38 LSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYK 97
Query: 61 EMGWNGVK-PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
++ + P+ T + +C+ L GK +HG + G +V +AL+ MY +
Sbjct: 98 QLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKF 157
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ +A VFD M RD +SWN +L+ Y + +K LF M + + +W A+I
Sbjct: 158 DDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTI----VSWTAMI 213
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
G G E+++ R+MQ G +P+EI++ S+LP+C+ L SL +GK +H Y R G
Sbjct: 214 SGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERR--G 271
Query: 240 DLSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
L T AL+ MY+KC ++ + +F M KDV++W+TMI A HGN A+ F
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFN 331
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
M R+ VKPN +TF G+LS CSH + EGL+ F+ M +D+ +EP HY C++DV +RA
Sbjct: 332 EMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA 391
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
G+L+ A + + MP++P + WG+LL +CR N+++A +A L ++EP + GNYV L
Sbjct: 392 GKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLA 451
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
NI W + S++R ++++ + KTPG S ++V N V FV GD S F
Sbjct: 452 NIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKP-------FWT 504
Query: 477 ELGQKMKLAGYKPDTDYV 494
E+ ++L D D +
Sbjct: 505 EISIVLQLFTSHQDQDVI 522
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 188/613 (30%), Positives = 293/613 (47%), Gaps = 102/613 (16%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVG-RDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
DV + N L+ Y +CK I A +F+ + G ++ V+WTS+ + Y G + + F ++
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL 218
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G + N T S+L AC+ + G +H V+ G N++V SAL+ MYA+C +
Sbjct: 219 RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREM 278
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ ARA+ + M D VSWN ++ + L++F RM +K D T +++ C
Sbjct: 279 ESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL-NC 337
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+TE +++ HC ++
Sbjct: 338 FALSRTE---------------------------------MKIASSAHCLIVKTGYATYK 364
Query: 243 -STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
ALV MYAK ++ + VF+ M +KDV++W ++ N +G+ EAL LF NM
Sbjct: 365 LVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG 424
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQ--------------------------------- 328
G+ P+ + VLS + L++ G Q
Sbjct: 425 GITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Query: 329 --IFNSM---------------GRDHLVE----------------PDANHYSCMVDVFSR 355
IFNSM ++ L+E P HY+CM+D+F R
Sbjct: 485 NVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGR 544
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSL 415
+G + + + +M +EP A+ W A+L A R N+E + AAK L ++EPNN YV L
Sbjct: 545 SGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQL 604
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL 475
N+ +A EA+ +R LMK R I+K PGCSW++ +VH+F+ DR + +IY +
Sbjct: 605 SNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKV 664
Query: 476 DELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNL 535
DE+ +K AGY D + L D+D+E K L HSEKLAVAFG+L + + IR+ KNL
Sbjct: 665 DEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGAPIRIIKNL 724
Query: 536 RICGDCHNAIKYM 548
R+CGDCH+A+K +
Sbjct: 725 RVCGDCHSAMKLL 737
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 150/300 (50%), Gaps = 17/300 (5%)
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
G IH +A R + N+ L+ ++ V EAR +FD MP RD +WN ++ AY
Sbjct: 17 GSCIHSYADRTKLHSNL-----LLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
++ LF R + +WNA+I G ++G E+ + +MQ G KPNE T
Sbjct: 72 SRRLSDAEKLF----RSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYT 127
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+ S+L C+ L L G+++H + ++ D++ L+ MYA+C ++ + +F+ M
Sbjct: 128 LGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETME 187
Query: 269 -KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL 327
+K+ V W +M+ + +G +A+ F ++ R G + N TF VL+ C+ G+
Sbjct: 188 GEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGV 247
Query: 328 QIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGAC 385
Q+ + + N Y S ++D++++ ++ A ++ M ++ S W +++ C
Sbjct: 248 QVHCCIVKSGF---KTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGC 303
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 273/487 (56%), Gaps = 8/487 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D + NALI Y + A F + +D++SW ++ + + Q L + H
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLH 421
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMV---ENVFVCSALVSMYA 117
+ + ++VT+ S+L C ++ + K +HG++V+ G++ E + +AL+ YA
Sbjct: 422 HLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 118 RCLSVKEARAVF-DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+C +V+ A +F L R VS+N +L+ Y + ++ LF+ MS D TW+
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMS----TTDLTTWS 537
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
++ E+ E++ + R++Q G +PN +TI ++LP C+ L SL + ++ H Y +R
Sbjct: 538 LMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG 597
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+GD+ L+ +YAKC L + +VF ++D+V + M+ A+HG GKEAL+++
Sbjct: 598 GLGDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+M S +KP+ V T +L+ C H+ L+ +GLQI++S+ H ++P Y+C VD+ +R
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
GRLD+AY F+ +MP+EP A+ WG LL AC + ++L A L E ++ GN+V +
Sbjct: 718 GRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLIS 777
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
N+ + W ++R LMK + + K GCSWL+V + + FV GD S+ D I++ ++
Sbjct: 778 NMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVN 837
Query: 477 ELGQKMK 483
L +MK
Sbjct: 838 ALYLQMK 844
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 182/391 (46%), Gaps = 43/391 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCI-EGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+ D + NAL+ Y K I A FD + +DVVSW ++ + + + F
Sbjct: 153 LEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSF 212
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKD---LNSGKAIHGFAVRHGMVE-NVFVCSALVSM 115
M +PN T++++LP C+ + SG+ IH + V+ ++ +VFVC++LVS
Sbjct: 213 CLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSF 272
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
Y R ++EA ++F M +D VSWN V+ Y +N E+ K LF + +G
Sbjct: 273 YLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKG-------- 324
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
P+ +TI SILP C+ L L GKE+H Y LR
Sbjct: 325 --------------------------DVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 236 HR--IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALL 293
H + D S AL+ YA+ D + + F +M KD+++WN ++ A A + L
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 294 LFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLV--EPDANHYSCMVD 351
L ++L + +SVT +L C + + + + ++ + L+ E + + ++D
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLD 478
Query: 352 VFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+++ G ++ A+K + T ++ +LL
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 180/387 (46%), Gaps = 47/387 (12%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWT-SLSSCYVNCGLPRQGLAIFHEMGW- 64
+S ++++ Y KC+ ++ +++F + D V W L+ V+CG R+ + F M +
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFA 115
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC-LSVK 123
+ KP++VT + +LP C L D +GK++H + ++ G+ ++ V +ALVSMYA+
Sbjct: 116 DEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFP 175
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A FD + +D VSWN ++ + N F M +E
Sbjct: 176 DAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPT--------------- 220
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE---SLRMGKEVHCYGLRHR--I 238
+PN TI+++LP C+ ++ + R G+++H Y ++
Sbjct: 221 --------------------EPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ +LV Y + + + ++F M KD+V+WN +I A + +A LF N+
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL 320
Query: 299 LRSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
+ G V P+SVT +L C+ + G +I + + R + D + + ++ ++R G
Sbjct: 321 VHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFG 380
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGA 384
AY M + S W A+L A
Sbjct: 381 DTSAAYWAFSLMSTKDIIS-WNAILDA 406
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 165/500 (33%), Positives = 276/500 (55%), Gaps = 9/500 (1%)
Query: 9 NALIHAYGKCKCIEGARRVFD----DLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
N +I + + E A ++F+ + D V+WTS+ SC+ CG L FH M
Sbjct: 228 NVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRM 287
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+G + ++ C+EL+ L+ + +HG+ ++ G E + +AL+ +Y + VK+
Sbjct: 288 SGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKD 347
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG----VKADKATWNAVIG 180
A +F + ++ SWN ++T++ + ++ L+LFS + VKA+ TW +VI
Sbjct: 348 AEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIK 407
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
GC G+ ++SLE R+MQ N +TI IL C+ L +L +G+E+H + +R + +
Sbjct: 408 GCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE 467
Query: 241 -LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ ALV MYAKC L+ VF+ + KD+++WN++I MHG ++AL +F+ M+
Sbjct: 468 NILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMI 527
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
SG P+ + VLS CSH+ LV++G +IF SM + +EP HY+C+VD+ R G L
Sbjct: 528 SSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFL 587
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EA + ++ MP+EP GALL +CR+ KNV++A+ A +L +EP G+Y+ L NI
Sbjct: 588 KEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIY 647
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELG 479
+ W E++ +R L K + + K G SW++V + + F G + + IY L++L
Sbjct: 648 SAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLV 707
Query: 480 QKMKLAGYKPDTDYVLQDVD 499
M G D + D+D
Sbjct: 708 SHMLKKGPTHDGNNYEDDLD 727
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 163/335 (48%), Gaps = 8/335 (2%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDL---VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
L+ LI Y + + AR VF+ + + D+ W S+ V+ GL L ++ M
Sbjct: 91 LAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMR 150
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+ + + IL AC L +A H ++ G+ EN+ V + L+++Y + +
Sbjct: 151 QRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMG 210
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A +F MP R+ +SWN ++ + + E + +F M RE K D+ TW +V+
Sbjct: 211 DAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHS 270
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LS 242
+ G+ E+ L+ M+ G + ++ C+ LE+L + ++VH Y ++ + L
Sbjct: 271 QCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLP 330
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR-- 300
S AL+++Y K + + ++F + K + +WN++I + G EAL LF +
Sbjct: 331 SRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMN 390
Query: 301 --SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
VK N VT+T V+ GC+ D+ L+ F M
Sbjct: 391 HVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M+ ++ + NAL++ Y KC + VF+ + +D++SW S+ Y G + L++F
Sbjct: 465 MSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFD 524
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARC 119
M +G P+ + + ++L ACS + G+ I + + R G+ + +V + R
Sbjct: 525 RMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRV 584
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVL 144
+KEA + MP V G L
Sbjct: 585 GFLKEASEIVKNMPMEPKVCVLGAL 609
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 260/493 (52%), Gaps = 36/493 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ + N LI +Y KC C R VFD + R+V++ T++ S + L GL +F M
Sbjct: 189 EISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMR 248
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
V PN+VT S L ACS + + G+ IH ++G+ + + SAL+ MY++C S++
Sbjct: 249 RGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIE 308
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A +F+ D VS +L G
Sbjct: 309 DAWTIFESTTEVDEVSMTVILV-----------------------------------GLA 333
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
+NG EE+++ +M + G + + +S++L I SL +GK++H ++ + G+
Sbjct: 334 QNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTF 393
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
L+ MY+KC DL S+ VF MPK++ V+WN+MI A A HG+G AL L+E M
Sbjct: 394 VNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLE 453
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
VKP VTF +L CSH L+D+G ++ N M H +EP HY+C++D+ RAG L EA
Sbjct: 454 VKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEA 513
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
FI +PL+P W ALLGAC + E+ + AA++LF P++ ++ + NI S
Sbjct: 514 KSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSR 573
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
W E ++ MK G+TK G S +++ ++ H+FVV D+ + ++ IY+ L L M
Sbjct: 574 GKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVM 633
Query: 483 KLAGYKPDTDYVL 495
GY+PD ++L
Sbjct: 634 VDEGYRPDKRFIL 646
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 173/380 (45%), Gaps = 45/380 (11%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N+L+ Y KC + A ++FD++ RDV+S + ++ G + M +G
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
+A T++ +L C + K IH A+ G + + V + L++ Y +C R V
Sbjct: 154 DHA-TLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGV 212
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
FD M HR+ ++ V++ N+ +E GL LFS M R V
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLV-------------------- 252
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTAL 247
PN +T S L ACS + + G+++H ++ I +L +AL
Sbjct: 253 ---------------HPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESAL 297
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ MY+KC + + +F+ + D V+ +++ A +G+ +EA+ F ML++GV+ ++
Sbjct: 298 MDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDA 357
Query: 308 VTFTGVLSGCSHSRLVDEGLQI---FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
+ VL G S +D L + +S+ + + +++++S+ G L ++
Sbjct: 358 NVVSAVL-GVS---FIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQT 413
Query: 365 FIQRMPLEPTASAWGALLGA 384
+RMP S W +++ A
Sbjct: 414 VFRRMPKRNYVS-WNSMIAA 432
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 34/308 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S++ + +AL+ Y KC IE A +F+ D VS T + G + + F
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M GV+ +A VS++L L GK +H ++ N FV + L++MY++C
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCG 406
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ +++ VF MP R+ VSWN ++ A+ + L L+ M+ VK T+ +++
Sbjct: 407 DLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLH 466
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
C G ++ E+L +M KEVH G+ R
Sbjct: 467 ACSHVGLIDKGRELLNEM----------------------------KEVH--GIEPRT-- 494
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENML 299
T ++ M + L +++ D +P K D W ++ A + HG+ + E +
Sbjct: 495 -EHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLF 553
Query: 300 RSGVKPNS 307
++ +S
Sbjct: 554 QTAPDSSS 561
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 44/266 (16%)
Query: 106 VFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR 165
+ V ++L+S+YA+C + +A +FD MP RD +S N V + N+E E G L RM
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 166 EGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRM 225
G GF +TI +L C E +
Sbjct: 150 SG----------------------------------GFDHATLTI--VLSVCDTPEFCLV 173
Query: 226 GKEVHCYG-LRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMI---IA 281
K +H L ++S L+ Y KC R VFD M ++V+ +I I
Sbjct: 174 TKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIE 233
Query: 282 NAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP 341
N +H +G L LF M R V PNSVT+ L+ CS S+ + EG QI +++ + +E
Sbjct: 234 NELHEDG---LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIES 289
Query: 342 DANHYSCMVDVFSRAGRLDEAYKFIQ 367
+ S ++D++S+ G +++A+ +
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIFE 315
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ + F++N LI+ Y KC + ++ VF + R+ VSW S+ + + G L ++
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKA-IHGFAVRHGMVENVFVCSALVSMYARC 119
EM VKP VT S+L ACS + ++ G+ ++ HG+ + ++ M R
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 120 LSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
+KEA++ D +P + D W +L A + + E G ++ + D ++ + +
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTA--PDSSSAHIL 565
Query: 179 IGGCMEN-GQTEESLEMLRKMQKMGFKPNEITISSI 213
I + G+ +E + +++M+ MG E ISSI
Sbjct: 566 IANIYSSRGKWKERAKTIKRMKAMGVT-KETGISSI 600
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 280/527 (53%), Gaps = 39/527 (7%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D L N I A K ++ A + +V + +L +V C P + L ++
Sbjct: 801 LNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYV 860
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M + V P++ T SS++ A S G+++ + G +V + + L+ Y+
Sbjct: 861 RMLRDSVSPSSYTYSSLVKASSFASRF--GESLQAHIWKFGFGFHVKIQTTLIDFYSATG 918
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAY-----------FTNKEYEKGLA----------- 158
++EAR VFD MP RD ++W +++AY N+ EK A
Sbjct: 919 RIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMG 978
Query: 159 ---------LFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
LF++M VK D +W +I G +N + E++ + KM + G P+E+T
Sbjct: 979 LGNLEQAESLFNQMP---VK-DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVT 1034
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+S+++ AC+ L L +GKEVH Y L++ + D+ +ALV MY+KC L + VF +P
Sbjct: 1035 MSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLP 1094
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
KK++ WN++I A HG +EAL +F M VKPN+VTF V + C+H+ LVDEG +
Sbjct: 1095 KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRR 1154
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVF 388
I+ SM D+ + + HY MV +FS+AG + EA + I M EP A WGALL CR+
Sbjct: 1155 IYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIH 1214
Query: 389 KNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKT-PGCS 447
KN+ +A+IA KL +EP N G Y L ++ W + ++IR M++ GI K PG S
Sbjct: 1215 KNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTS 1274
Query: 448 WLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYV 494
+++ R H F D+S++ SD++ LDE+ +M LAGY +T+ V
Sbjct: 1275 SIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQETENV 1321
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 253/486 (52%), Gaps = 38/486 (7%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++D+ L N+L++ Y K + + A +F + +DV+SW+++ +CYV G + L +F+
Sbjct: 194 FSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFN 253
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M +G +PN TV +L AC+ DL G+ H A+R G+ V V +ALV MY +C
Sbjct: 254 DMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCF 313
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S +EA AVF +P + D +W A+I
Sbjct: 314 SPEEAYAVFSRIPRK-----------------------------------DVVSWVALIS 338
Query: 181 GCMENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
G NG S+E M + +P+ I + +L +CS L L K H Y +++
Sbjct: 339 GFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD 398
Query: 240 DLSSTTA-LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
A LV +Y++C L + VF+ + KD V W ++I +HG G +AL F +M
Sbjct: 399 SNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHM 458
Query: 299 LRSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
++S VKPN VTF +LS CSH+ L+ EGL+IF M D+ + P+ HY+ +VD+ R G
Sbjct: 459 VKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVG 518
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFN 417
LD A + +RMP PT G LLGACR+ +N E+A+ AKKLF++E N+ G Y+ + N
Sbjct: 519 DLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSN 578
Query: 418 ILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDE 477
+ W ++R +K RGI K S +++ +VH FV D + + +Y L E
Sbjct: 579 VYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKE 638
Query: 478 LGQKMK 483
L MK
Sbjct: 639 LDLHMK 644
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 191/385 (49%), Gaps = 40/385 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SD+++ ++LI+ Y KC + A R+FD+L D+V+W+S+ S + G P Q + F
Sbjct: 92 LGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFR 151
Query: 61 EMGW-NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M + V P+ VT+ +++ AC++L + G+ +HGF +R G ++ + ++L++ YA+
Sbjct: 152 RMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKS 211
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ KEA +F ++ +D +SW+ V+ Y N + L +F+ M +G
Sbjct: 212 RAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGT----------- 260
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI- 238
+PN T+ +L AC+ L G++ H +R +
Sbjct: 261 ------------------------EPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLE 296
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
++ +TALV MY KC + VF +P+KDVV+W +I ++G ++ F M
Sbjct: 297 TEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIM 356
Query: 299 -LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
L + +P+++ VL CS +++ + F+S + + + + +V+++SR G
Sbjct: 357 LLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCG 415
Query: 358 RLDEAYKFIQRMPLEPTASAWGALL 382
L A K + L+ T W +L+
Sbjct: 416 SLGNASKVFNGIALKDTV-VWTSLI 439
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 174/361 (48%), Gaps = 38/361 (10%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
AR++F ++ R + W +L + L F M + KP+ T+ L AC E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 84 LKDLNSGKAIHGFAVRH-GMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNG 142
L+++N G+ IHGF + + +++V S+L+ MY +C + EA +FD + D V+W+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 143 VLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMG 202
+++ + N + + F RM V A T
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRM----VMASDVT---------------------------- 160
Query: 203 FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSR 261
P+ +T+ +++ AC+ L + R+G+ VH + +R DLS +L+ YAK +
Sbjct: 161 --PDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAV 218
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSR 321
N+F M+ +KDV++W+T+I +G EALL+F +M+ G +PN T VL C+ +
Sbjct: 219 NLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAH 278
Query: 322 LVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
+++G + R L E + + +VD++ + +EAY R+P + S W AL
Sbjct: 279 DLEQGRKTHELAIRKGL-ETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVS-WVAL 336
Query: 382 L 382
+
Sbjct: 337 I 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
+R +F M K+ + WNT++ + + +E L F +M R KP++ T L C
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWG 379
R V+ G I + +D + D S ++ ++ + GR+ EA + + +P W
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE-KPDIVTWS 131
Query: 380 ALLGACRVFKNVELAKIAAKKLFDIEPN-NPGNYVSLFNILVSAKLWSEASQIRILMKDR 438
+++ E N +P V F +V A S+ + R+ +
Sbjct: 132 SMVSG-------------------FEKNGSPYQAVEFFRRMVMA---SDVTPDRVTL--- 166
Query: 439 GITKTPGCSWL---QVGNRVHTFVV 460
IT C+ L ++G VH FV+
Sbjct: 167 -ITLVSACTKLSNSRLGRCVHGFVI 190
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/479 (35%), Positives = 258/479 (53%), Gaps = 38/479 (7%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM--GW 64
+ +AL+ Y KC C A VF + +D+V+W SL S G ++ L +F +M
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ +KP++ ++S+ AC+ L+ L G +HG ++ G+V NVFV S+L+ +Y++C
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCG---- 525
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
+P E L +F+ MS E + A WN++I
Sbjct: 526 -------LP--------------------EMALKVFTSMSTENMVA----WNSMISCYSR 554
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSS 243
N E S+++ M G P+ ++I+S+L A S SL GK +H Y LR I D
Sbjct: 555 NNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHL 614
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
AL+ MY KC + N+F M K ++ WN MI HG+ AL LF+ M ++G
Sbjct: 615 KNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE 674
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
P+ VTF ++S C+HS V+EG IF M +D+ +EP+ HY+ MVD+ RAG L+EAY
Sbjct: 675 SPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAY 734
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
FI+ MP+E +S W LL A R NVEL ++A+KL +EP YV L N+ + A
Sbjct: 735 SFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAG 794
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
L +EA+++ LMK++G+ K PGCSW++V +R + F G S+ +I+ L+ L M
Sbjct: 795 LKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNM 853
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 195/437 (44%), Gaps = 63/437 (14%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR-DVVSWTSLSSCYVNCGLPRQGLAIF 59
+ +D FL ALI Y K A RVF ++ + +VV W + + G+ L ++
Sbjct: 201 LDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLY 260
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
N VK + + + L ACS+ ++ G+ IH V+ G+ + +VC++L+SMY++C
Sbjct: 261 MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
V EA VF + + WN ++ AY N L LF M ++ V D
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPD-------- 372
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
T+S+++ CS+L GK VH + I
Sbjct: 373 ---------------------------SFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQ 405
Query: 240 DLSST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
S+ +AL+ +Y+KC + VF M +KD+VAW ++I +G KEAL +F +M
Sbjct: 406 STSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDM 465
Query: 299 L--RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFS 354
+KP+S T V + C+ + GLQ+ SM + LV N + S ++D++S
Sbjct: 466 KDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLV---LNVFVGSSLIDLYS 522
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
+ G + A K M E AW +++ +C N+ P +
Sbjct: 523 KCGLPEMALKVFTSMSTENMV-AWNSMI-SCYSRNNL-----------------PELSID 563
Query: 415 LFNILVSAKLWSEASQI 431
LFN+++S ++ ++ I
Sbjct: 564 LFNLMLSQGIFPDSVSI 580
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 112/204 (54%), Gaps = 1/204 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+VF+ ++LI Y KC E A +VF + ++V+W S+ SCY LP + +F+ M
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+ P++V+++S+L A S L GK++HG+ +R G+ + + +AL+ MY +C K
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSK 629
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +F M H+ ++WN ++ Y ++ + L+LF M + G D T+ ++I C
Sbjct: 630 YAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACN 689
Query: 184 ENGQTEESLEMLRKM-QKMGFKPN 206
+G EE + M Q G +PN
Sbjct: 690 HSGFVEEGKNIFEFMKQDYGIEPN 713
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 184/405 (45%), Gaps = 49/405 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDD-------LVGRDVVSWTSLSSCYVNCGLPRQGL 56
D F++ +L++ Y KC ++ A +VFD + RDV W S+ Y ++G+
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV 153
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDL--NSGKAIHGFAVRHGMVENVFVCSALVS 114
F M GV+P+A ++S ++ + + GK IHGF +R+ + + F+ +AL+
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 115 MYARC-LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKA 173
MY + LS+ R ++ + V WN ++ +
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF-------------------------- 247
Query: 174 TWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYG 233
GG +G E SL++ + K + + L ACS E+ G+++HC
Sbjct: 248 ------GG---SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDV 298
Query: 234 LRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
++ + D T+L+ MY+KC + + VF + K + WN M+ A A + G AL
Sbjct: 299 VKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSAL 358
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
LF M + V P+S T + V+S CS L + G + + + ++ + S ++ +
Sbjct: 359 DLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTL 417
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALL-GACRVFKNVELAKI 396
+S+ G +AY + M E AWG+L+ G C+ K E K+
Sbjct: 418 YSKCGCDPDAYLVFKSME-EKDMVAWGSLISGLCKNGKFKEALKV 461
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 176/370 (47%), Gaps = 35/370 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +D ++ +L+ Y KC + A VF +V + + W ++ + Y L +F
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M V P++ T+S+++ CS L N GK++H + + + SAL+++Y++C
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+A VF M +D V+W +++ N ++++ L +F M +
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD-------------- 468
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIG 239
++SL KP+ ++S+ AC+ LE+LR G +VH ++ +
Sbjct: 469 --------DDSL-----------KPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVL 509
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
++ ++L+ +Y+KC ++ VF M +++VAWN+MI + + + ++ LF ML
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLML 569
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
G+ P+SV+ T VL S + + +G + R + D + + ++D++ + G
Sbjct: 570 SQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG-IPSDTHLKNALIDMYVKCGFS 628
Query: 360 DEAYKFIQRM 369
A ++M
Sbjct: 629 KYAENIFKKM 638
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 143/321 (44%), Gaps = 44/321 (13%)
Query: 73 TVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD-- 130
T S+L ACS L +L+ GK IHG V G + F+ ++LV+MY +C + A VFD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 131 -----LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+ RD WN ++ YF + +++G+ F RM GV+ D + + V+ +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSST 244
G F+ E GK++H + LR+ + D
Sbjct: 182 GN---------------FRREE------------------GKQIHGFMLRNSLDTDSFLK 208
Query: 245 TALVYMYAKCS-DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
TAL+ MY K ++ R ++ K +VV WN MI+ G + +L L+ + V
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSV 268
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
K S +FTG L CS S G QI + + L D + ++ ++S+ G + EA
Sbjct: 269 KLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGL-HNDPYVCTSLLSMYSKCGMVGEA- 326
Query: 364 KFIQRMPLEPTASAWGALLGA 384
+ + ++ W A++ A
Sbjct: 327 ETVFSCVVDKRLEIWNAMVAA 347
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/480 (33%), Positives = 253/480 (52%), Gaps = 8/480 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+++ N ++ Y K + AR VFD + RDVVSW ++ Y G + L + E
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G+K N + + +L AC + + L + HG + G + NV + +++ YA+C ++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A+ FD M +D W +++ Y + E LF M + + +W A+I G +
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYV 287
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
G +L++ RKM +G KP + T SS L A + + SLR GKE+H Y +R + +
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
++L+ MY+K L S VF + K D V WNTMI A A HG G +AL + ++M++
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
V+PN T +L+ CSHS LV+EGL+ F SM H + PD HY+C++D+ RAG E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
+ I+ MP EP W A+LG CR+ N EL K AA +L ++P + Y+ L +I
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDK--IYEFLDELG 479
W ++R +MK R + K SW+++ +V F V D S+ + K IY L L
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLA 587
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 163/366 (44%), Gaps = 42/366 (11%)
Query: 54 QGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH------GFAVRHGMV---- 103
Q ++ + G++ ++S+L C + K L GK IH GF + ++
Sbjct: 29 QAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHL 88
Query: 104 ----------------------ENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWN 141
N++ + +VS Y + + AR VFD MP RD VSWN
Sbjct: 89 IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWN 148
Query: 142 GVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM 201
++ Y + + L + R G+K ++ ++ ++ C+++ Q + + + ++
Sbjct: 149 TMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 202 GFKPNEITISSILPA---CSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLN 258
GF N + SI+ A C +ES + C+ + D+ T L+ YAK D+
Sbjct: 209 GFLSNVVLSCSIIDAYAKCGQMESAK-----RCFD-EMTVKDIHIWTTLISGYAKLGDME 262
Query: 259 LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
+ +F MP+K+ V+W +I G+G AL LF M+ GVKP TF+ L +
Sbjct: 263 AAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASA 322
Query: 319 HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAW 378
+ G +I M R + V P+A S ++D++S++G L+ + + + + W
Sbjct: 323 SIASLRHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 379 GALLGA 384
++ A
Sbjct: 382 NTMISA 387
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 19/279 (6%)
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
L+ + T E + ++ ++++G++ +++ C + ++ + R ++ GF
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGL--RHRIGDLSSTTALVYMYAKCSDLNLSR 261
K +S+ L I ++ GK + + + + +L S +V Y K L +R
Sbjct: 78 KRPNTLLSNHL----IGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRAR 133
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSR 321
VFD MP++DVV+WNTM+I A GN EAL ++ RSG+K N +F G+L+ C SR
Sbjct: 134 VVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSR 193
Query: 322 LVDEGLQIFNSMGRDHLVEPDANH--YSC-MVDVFSRAGRLDEAYKFIQRMPLEPTASAW 378
LQ+ LV ++ SC ++D +++ G+++ A + M ++ W
Sbjct: 194 ----QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI-HIW 248
Query: 379 GALLGACRVFKNVELAKIAAKKLF-DIEPNNPGNYVSLF 416
L+ ++E AA+KLF ++ NP ++ +L
Sbjct: 249 TTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTALI 283
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 262/502 (52%), Gaps = 38/502 (7%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V LSNAL+ Y KC+ + A ++FD R+ ++W+++ + Y G + + +F M
Sbjct: 256 VALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS 315
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+KP+ T+ +L ACS++ L GK +H F ++ G ++F +ALV MYA+ + +
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
AR FD + RD A W ++I G ++
Sbjct: 376 ARKGFDCLQERDV-----------------------------------ALWTSLISGYVQ 400
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSS 243
N EE+L + R+M+ G PN+ T++S+L ACS L +L +GK+VH + ++H G ++
Sbjct: 401 NSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPI 460
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+AL MY+KC L VF P KDVV+WN MI + +G G EAL LFE ML G+
Sbjct: 461 GSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM 520
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+P+ VTF ++S CSH V+ G FN M ++P +HY+CMVD+ SRAG+L EA
Sbjct: 521 EPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
+FI+ ++ W LL AC+ EL A +KL + YV L I +
Sbjct: 581 EFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALG 640
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
+ ++ M+ G++K GCSW+++ N+ H FVVGD + ++ + + + ++M
Sbjct: 641 RMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMI 700
Query: 484 LAGYKPDTDYVLQDVDQEEKAE 505
G+ D V++EE +
Sbjct: 701 EEGFVTVLDSSF--VEEEEGTQ 720
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 196/412 (47%), Gaps = 49/412 (11%)
Query: 8 SNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQG---LAIFHEMGW 64
+N L++ Y KC + A +F+ ++ +DVVSW SL + Y G + +F EM
Sbjct: 52 ANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRA 111
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ PNA T++ I A S L+ G+ H V+ +++V ++LV MY + V++
Sbjct: 112 QDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
VF MP R+ +W+ +++ Y T E+ + +F+ RE + + +
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDY--------- 222
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIGDLSS 243
+++L + + + +G+++HC +++ +G ++
Sbjct: 223 ------------------------VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVAL 258
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+ ALV MY+KC LN + +FD ++ + W+ M+ + +G EA+ LF M +G+
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGI 318
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR----DHLVEPDANHYSCMVDVFSRAGRL 359
KP+ T GVL+ CS ++EG Q+ + + + HL A +VD++++AG L
Sbjct: 319 KPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA-----LVDMYAKAGCL 373
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKL--FDIEPNNP 409
+A K + E + W +L+ + E A I +++ I PN+P
Sbjct: 374 ADARKGFDCLQ-ERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDP 424
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 182/382 (47%), Gaps = 40/382 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH--- 60
D+++ +L+ Y K +E +VF + R+ +W+++ S Y G + + +F+
Sbjct: 152 DIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFL 211
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
G + V +++L + + + G+ IH +++G++ V + +ALV+MY++C
Sbjct: 212 REKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCE 270
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
S+ EA +FD R++++W+ ++T Y N E + + LFSRM G+K + T V+
Sbjct: 271 SLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLN 330
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
C + EE ++ + K+GF+ RH
Sbjct: 331 ACSDICYLEEGKQLHSFLLKLGFE------------------------------RH---- 356
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
L +TTALV MYAK L +R FD + ++DV W ++I + + +EAL+L+ M
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+G+ PN T VL CS ++ G Q+ + H + S + ++S+ G L+
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK-HGFGLEVPIGSALSTMYSKCGSLE 475
Query: 361 EAYKFIQRMPLEPTASAWGALL 382
+ +R P + S W A++
Sbjct: 476 DGNLVFRRTPNKDVVS-WNAMI 496
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 36/303 (11%)
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
+ P+ T+ L S+ ++L +G+A+HG +R G + + LV+ YA+C + +A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
++F+ + +D VSWN ++T Y N GG
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQN-----------------------------GGI---S 97
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIGDLSSTT 245
+ +++ R+M+ PN T++ I A S L+S +G++ H ++ GD+ T
Sbjct: 98 SSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDT 157
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK- 304
+LV MY K + VF MP+++ W+TM+ A G +EA+ +F LR +
Sbjct: 158 SLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEG 217
Query: 305 -PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+ FT VLS + + V G QI ++ L+ A + +V ++S+ L+EA
Sbjct: 218 SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALS-NALVTMYSKCESLNEAC 276
Query: 364 KFI 366
K
Sbjct: 277 KMF 279
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 19/222 (8%)
Query: 203 FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSSTTALVYMYAKCSDLNLSR 261
P+ T+ L S +L G+ VH +R + LV YAKC L +
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHG---NGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
++F+ + KDVV+WN++I + +G + + LF M + PN+ T G+ S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 319 HSRLVDEGLQI------FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
+ G Q +S G D V+ + +V ++ +AG +++ K MP E
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFG-DIYVD------TSLVGMYCKAGLVEDGLKVFAYMP-E 181
Query: 373 PTASAWGALLGACRVFKNVELA-KIAAKKLFDIEPNNPGNYV 413
W ++ VE A K+ L + E + +YV
Sbjct: 182 RNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV 223
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+V + +AL Y KC +E VF +DVVSW ++ S + G + L +F EM
Sbjct: 457 EVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEML 516
Query: 64 WNGVKPNAVTVSSILPACS 82
G++P+ VT +I+ ACS
Sbjct: 517 AEGMEPDDVTFVNIISACS 535
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/457 (36%), Positives = 252/457 (55%), Gaps = 44/457 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++D+ + ++ Y K KCI ARRVFD ++ V+W+++ YV + ++ +F
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 61 EMGWNG----VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+M N V P V + IL C+ DL+ G+ +H +AV+ G + ++ V + ++S Y
Sbjct: 296 QMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFY 353
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
A+ S+ +A F + S G+K D ++N
Sbjct: 354 AKYGSLCDA----------------------------------FRQFSEIGLK-DVISYN 378
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
++I GC+ N + EES + +M+ G +P+ T+ +L ACS L +L G H Y + H
Sbjct: 379 SLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVH 438
Query: 237 RIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+ S AL+ MY KC L++++ VFD M K+D+V+WNTM+ +HG GKEAL LF
Sbjct: 439 GYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLF 498
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR-DHLVEPDANHYSCMVDVFS 354
+M +GV P+ VT +LS CSHS LVDEG Q+FNSM R D V P +HY+CM D+ +
Sbjct: 499 NSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLA 558
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
RAG LDEAY F+ +MP EP G LL AC +KN EL +KK+ + + V
Sbjct: 559 RAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTE-SLVL 617
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQV 451
L N +A+ W +A++IR++ K RG+ KTPG SW+ V
Sbjct: 618 LSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 196/454 (43%), Gaps = 75/454 (16%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDV--VSWTSLSSCYVNCGLPRQGLAI 58
++S L N L Y C +E AR VFD++ + ++W + Y + + L +
Sbjct: 32 LSSSTVLVN-LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDL 90
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+++M +GV+P T +L AC+ L+ ++ GK IH +++VC+ALV YA+
Sbjct: 91 YYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK 150
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR-EGVKADKATW-- 175
C ++ A VFD MP RD V+WN +++ + + + LF M R +G+ + +T
Sbjct: 151 CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 176 --------------NAVIGGCMENGQTEE---------------SLEMLRKMQKMGFKPN 206
AV G C G + + + R++ + FK N
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKN 270
Query: 207 EITISS-------------------------------------ILPACSILESLRMGKEV 229
E+T S+ IL C+ L G+ V
Sbjct: 271 EVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCV 330
Query: 230 HCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG 288
HCY ++ I DL+ ++ YAK L + F + KDV+++N++I ++
Sbjct: 331 HCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRP 390
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
+E+ LF M SG++P+ T GVL+ CSH + G + H + + +
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSC-HGYCVVHGYAVNTSICNA 449
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
++D++++ G+LD A + M S W +L
Sbjct: 450 LMDMYTKCGKLDVAKRVFDTMHKRDIVS-WNTML 482
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 41/336 (12%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
S+L C ++L G+ IH ++ + + + V L +YA C V+ AR VFD +PH
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
+ + W+ +I N E++L++
Sbjct: 64 P---------------------------------RINPIAWDLMIRAYASNDFAEKALDL 90
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY-GLRHRIGDLSSTTALVYMYAK 253
KM G +P + T +L AC+ L ++ GK +H + D+ TALV YAK
Sbjct: 91 YYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAK 150
Query: 254 CSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR-SGVKPNSVTFTG 312
C +L ++ VFD MPK+D+VAWN MI ++H + + LF +M R G+ PN T G
Sbjct: 151 CGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVG 210
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
+ + + EG + R D + ++DV++++ + A + + +
Sbjct: 211 MFPALGRAGALREGKAVHGYCTRMGF-SNDLVVKTGILDVYAKSKCIIYARRVFD-LDFK 268
Query: 373 PTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNN 408
W A++G + E+ K A + F + N+
Sbjct: 269 KNEVTWSAMIGG---YVENEMIKEAGEVFFQMLVND 301
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 274/483 (56%), Gaps = 38/483 (7%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+ + N+L+ Y +C + + VF + RDVVSW ++ S +V GL +GL + +EM
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G K + +TV+++L A S L++ GK H F +R G ++ + S L+ MY++ ++
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMNSYLIDMYSKSGLIRI 471
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
++ +F+ G A + D+ATWN++I G +
Sbjct: 472 SQKLFE-----------------------GSGYA----------ERDQATWNSMISGYTQ 498
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSS 243
NG TE++ + RKM + +PN +T++SILPACS + S+ +GK++H + +R + ++
Sbjct: 499 NGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFV 558
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+ALV MY+K + + ++F +++ V + TMI+ HG G+ A+ LF +M SG+
Sbjct: 559 ASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGI 618
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KP+++TF VLS CS+S L+DEGL+IF M + ++P + HY C+ D+ R GR++EAY
Sbjct: 619 KPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAY 678
Query: 364 KFIQRMPLEPT-ASAWGALLGACRVFKNVELAKIAAKKL--FDIEPNNPGNYVSLFNILV 420
+F++ + E A WG+LLG+C++ +ELA+ +++L FD N G V L N+
Sbjct: 679 EFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYA 738
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
+ W ++R M+++G+ K G S +++ V+ FV D+ + S +IY+ +D L +
Sbjct: 739 EEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAK 798
Query: 481 KMK 483
M+
Sbjct: 799 DMR 801
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 43/364 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE-M 62
D+F+ ++ I Y + IE +RRVFD V R++ W ++ YV + + +F E +
Sbjct: 250 DLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAI 309
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G + + VT A S L+ + G+ HGF ++ + + ++L+ MY+RC SV
Sbjct: 310 GSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSV 369
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++ VF M RD VSWN +++A+ N ++GL L M ++G
Sbjct: 370 HKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG--------------- 414
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
FK + IT++++L A S L + +GK+ H + +R I
Sbjct: 415 --------------------FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG 454
Query: 243 STTALVYMYAKCSDLNLSRNVFD--MMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ L+ MY+K + +S+ +F+ ++D WN+MI +G+ ++ L+F ML
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGR 358
++PN+VT +L CS VD G Q+ R +L D N + S +VD++S+AG
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL---DQNVFVASALVDMYSKAGA 571
Query: 359 LDEA 362
+ A
Sbjct: 572 IKYA 575
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 197/424 (46%), Gaps = 54/424 (12%)
Query: 9 NALIHAYGKC----KCIEG--ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
N+L++ Y C C E R+VFD++ ++VV+W +L S YV G + F M
Sbjct: 146 NSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIM 205
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG--MVENVFVCSALVSMYARCL 120
VKP+ V+ ++ PA S + + +G ++ G V+++FV S+ +SMYA
Sbjct: 206 MRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELG 265
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ +R VFD R+ WN ++ Y N
Sbjct: 266 DIESSRRVFDSCVERNIEVWNTMIGVYVQND----------------------------- 296
Query: 181 GCMENGQTEESLEMLRKMQKMGFK---PNEITISSILPACSILESLRMGKEVHCYGLRH- 236
C+ ES+E+ ++ +G K +E+T A S L+ + +G++ H + ++
Sbjct: 297 -CL-----VESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
R + +L+ MY++C ++ S VF M ++DVV+WNTMI A +G E L+L
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
M + G K + +T T +LS S+ R + G Q + R + N Y ++D++S++
Sbjct: 409 EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKS 466
Query: 357 GRLDEAYKFIQRMPL-EPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSL 415
G + + K + E + W +++ + E + +K+ +E N N V++
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM--LEQNIRPNAVTV 524
Query: 416 FNIL 419
+IL
Sbjct: 525 ASIL 528
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 166/375 (44%), Gaps = 53/375 (14%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPN--AVTVSSILPAC 81
AR++FD + V W ++ ++ LP + L + M N A T SS L AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 82 SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE------ARAVFDLMPHR 135
+E K+L +GKA+H +R + V ++L++MY CL+ + R VFD M +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
+ V+WN +++ Y ++ G+ E+
Sbjct: 178 NVVAWNTLISWY-----------------------------------VKTGRNAEACRQF 202
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-----DLSSTTALVYM 250
M +M KP+ ++ ++ PA SI S++ K YGL ++G DL ++ + M
Sbjct: 203 GIMMRMEVKPSPVSFVNVFPAVSISRSIK--KANVFYGLMLKLGDEYVKDLFVVSSAISM 260
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF-ENMLRSGVKPNSVT 309
YA+ D+ SR VFD ++++ WNTMI + E++ LF E + + + VT
Sbjct: 261 YAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVT 320
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ S S + V+ G Q + ++ P S MV ++SR G + +++ M
Sbjct: 321 YLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMV-MYSRCGSVHKSFGVFLSM 379
Query: 370 PLEPTASAWGALLGA 384
E +W ++ A
Sbjct: 380 R-ERDVVSWNTMISA 393
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +VF+++AL+ Y K I+ A +F R+ V++T++ Y G+ + +++F
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 61 EMGWNGVKPNAVTVSSILPACS 82
M +G+KP+A+T ++L ACS
Sbjct: 612 SMQESGIKPDAITFVAVLSACS 633
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 268/510 (52%), Gaps = 29/510 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+V ++++H Y K I AR +FD + R+V++WT++ Y G G +F M
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 64 WNG-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G VK N+ T++ + AC + G IHG R + ++F+ ++L+SMY++ +
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV-------------- 168
EA+AVF +M ++D+VSWN ++T K+ + LF +M + +
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKG 386
Query: 169 -------------KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
+ D TW A+I + NG EE+L KM + PN T SS+L
Sbjct: 387 EISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLS 446
Query: 216 ACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVA 274
A + L L G ++H ++ I DLS +LV MY KC + N + +F + + ++V+
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 275 WNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMG 334
+NTMI + +G GK+AL LF + SG +PN VTF +LS C H VD G + F SM
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 335 RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELA 394
+ +EP +HY+CMVD+ R+G LD+A I MP +P + WG+LL A + V+LA
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 395 KIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNR 454
++AAKKL ++EP++ YV L + + +I + K + I K PG SW+ +
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGE 686
Query: 455 VHTFVVGDRSNTGSDKIYEFLDELGQKMKL 484
VH F+ GD S ++I L + ++M+L
Sbjct: 687 VHNFLAGDESQLNLEEIGFTLKMIRKEMEL 716
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 123/552 (22%), Positives = 221/552 (40%), Gaps = 123/552 (22%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
++ +F N+ I + + ++ A +F + R +VSW ++ S Y G + +F E
Sbjct: 47 STAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDE 106
Query: 62 M------GWNGV----------------------KPNAVTVSSILPACSELKDLNSGKAI 93
M +N + + NAV+ ++++ + + +
Sbjct: 107 MPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFL 166
Query: 94 H------------------GF--------AVR--HGM-VENVFVCSALVSMYARCLSVKE 124
+ G+ AVR GM V+ V CS++V Y + + +
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVD 226
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAVIGGCM 183
AR++FD M R+ ++W ++ YF +E G LF RM +EG VK + T + C
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV-------------- 229
+ + E ++ + +M + + +S++ S L + K V
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 230 ------------HCYGLRHRI--GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
Y L ++ D+ S T ++ ++ +++ +F MMP+KD + W
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
MI A +G +EAL F ML+ V PNS TF+ VLS + + EGLQI + +
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVK 466
Query: 336 DHLV------------------------------EPDANHYSCMVDVFSRAGRLDEAYKF 365
++V EP+ Y+ M+ +S G +A K
Sbjct: 467 MNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKL 526
Query: 366 IQRMP---LEPTASAWGALLGACRVFKNVELAKIAAKKL---FDIEPNNPGNYVSLFNIL 419
+ EP + ALL AC V+L K + ++IEP P +Y + ++L
Sbjct: 527 FSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEP-GPDHYACMVDLL 585
Query: 420 VSAKLWSEASQI 431
+ L +AS +
Sbjct: 586 GRSGLLDDASNL 597
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/456 (34%), Positives = 255/456 (55%), Gaps = 9/456 (1%)
Query: 36 VVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNS--GKAI 93
VSWTS + G + F +M GV+PN +T ++L C + + G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 94 HGFAVRHGMVEN-VFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKE 152
HG+A + G+ N V V +A++ MY++ K+AR VFD M +++V+WN ++ Y + +
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 153 YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ +F +M D +W A+I G ++ G EE+L R+MQ G KP+ + I +
Sbjct: 156 VDNAAKMFDKMPER----DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 213 ILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
L AC+ L +L G VH Y L ++ + +L+ +Y +C + +R VF M K+
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
VV+WN++I+ A +GN E+L+ F M G KP++VTFTG L+ CSH LV+EGL+ F
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQ 331
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVF-KN 390
M D+ + P HY C+VD++SRAGRL++A K +Q MP++P G+LL AC N
Sbjct: 332 IMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNN 391
Query: 391 VELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
+ LA+ K L D+ + NYV L N+ + W AS++R MK G+ K PG S ++
Sbjct: 392 IVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIE 451
Query: 451 VGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAG 486
+ + +H F+ GD ++ + I E L+ + ++L G
Sbjct: 452 IDDCMHVFMAGDNAHVETTYIREVLELISSDLRLQG 487
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 33/243 (13%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N +I Y + ++ A ++FD + RD++SWT++ + +V G + L F EM +GVK
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ V + + L AC+ L L+ G +H + + NV V ++L+ +Y RC V+ AR V
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F M R VSWN V+ + N + L F +M +G K D T+ + C G
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 189 EESL---------------------------------EMLRKMQKMGFKPNEITISSILP 215
EE L + L+ +Q M KPNE+ I S+L
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 216 ACS 218
ACS
Sbjct: 384 ACS 386
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 6/206 (2%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
++V +SN+LI Y +C C+E AR+VF ++ R VVSW S+ + G + L F +M
Sbjct: 239 NNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKM 298
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
G KP+AVT + L ACS + + G + + + + LV +Y+R
Sbjct: 299 QEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGR 358
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD-KATWNAVIG 180
+++A + MP + G L A +N + + L R+ + + K+ N VI
Sbjct: 359 LEDALKLVQSMPMKPNEVVIGSLLAACSN--HGNNIVLAERLMKHLTDLNVKSHSNYVIL 416
Query: 181 GCM--ENGQTEESLEMLRKMQKMGFK 204
M +G+ E + +M RKM+ +G K
Sbjct: 417 SNMYAADGKWEGASKMRRKMKGLGLK 442
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 250/449 (55%), Gaps = 43/449 (9%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
L +L+ Y KC I ARRVF++ D+V WT++ Y + G + L++F +M
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
+KPN VT++S+L C +++L G+++HG +++ G + + V +ALV MYA+C ++A+
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAK 397
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
VF++ +D V+W N++I G +NG
Sbjct: 398 YVFEMESEKDIVAW-----------------------------------NSIISGFSQNG 422
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-- 244
E+L + +M PN +T++S+ AC+ L SL +G +H Y ++ +G L+S+
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVK--LGFLASSSV 480
Query: 245 ---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
TAL+ YAKC D +R +FD + +K+ + W+ MI G+ +L LFE ML+
Sbjct: 481 HVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKK 540
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
KPN TFT +LS C H+ +V+EG + F+SM +D+ P HY+CMVD+ +RAG L++
Sbjct: 541 QQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A I++MP++P +GA L C + +L +I KK+ D+ P++ YV + N+ S
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQ 450
W++A ++R LMK RG++K G S ++
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 182/383 (47%), Gaps = 39/383 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D + L+ Y KC I+ A +VF+D+ R+VV WTS+ + YV L +GL +F+ M
Sbjct: 175 DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR 234
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
N V N T +++ AC++L L+ GK HG V+ G+ + + ++L+ MY +C +
Sbjct: 235 ENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDIS 294
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR VF+ H D V W ++ Y N + L+LF +M +K + T +V+ G
Sbjct: 295 NARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSG-- 352
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
C ++E+L +G+ VH ++ I D +
Sbjct: 353 ---------------------------------CGLIENLELGRSVHGLSIKVGIWDTNV 379
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
ALV+MYAKC ++ VF+M +KD+VAWN++I + +G+ EAL LF M V
Sbjct: 380 ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESV 439
Query: 304 KPNSVTFTGVLSGCSH--SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
PN VT + S C+ S V L + S+ L + + ++D +++ G
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAY-SVKLGFLASSSVHVGTALLDFYAKCGDPQS 498
Query: 362 AYKFIQRMPLEPTASAWGALLGA 384
A + I E W A++G
Sbjct: 499 A-RLIFDTIEEKNTITWSAMIGG 520
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 188/386 (48%), Gaps = 46/386 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D+ ++ L+ YG + AR VFD + D W + CY + + ++
Sbjct: 72 LMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD 131
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+ +G + + + S L AC+EL+DL++GK IH V+ +NV V + L+ MYA+C
Sbjct: 132 LLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV-VLTGLLDMYAKCG 190
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+K A VF+ + R+ V W ++ Y N E+GL LF+RM RE N V+G
Sbjct: 191 EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRM-RE---------NNVLG 240
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
NE T +++ AC+ L +L GK H ++ I +
Sbjct: 241 -------------------------NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGI-E 274
Query: 241 LSS--TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
LSS T+L+ MY KC D++ +R VF+ D+V W MI+ +G+ EAL LF+ M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM-GRDHLVEP-DANHYSCMVDVFSRA 356
+KPN VT VLSGC + E L++ S+ G V D N + +V ++++
Sbjct: 335 KGVEIKPNCVTIASVLSGCG----LIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKC 390
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALL 382
+ +A K++ M E AW +++
Sbjct: 391 YQNRDA-KYVFEMESEKDIVAWNSII 415
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 123/243 (50%), Gaps = 13/243 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D ++NAL+H Y KC A+ VF+ +D+V+W S+ S + G + L +FH M
Sbjct: 376 DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMV--ENVFVCSALVSMYARCLS 121
V PN VTV+S+ AC+ L L G ++H ++V+ G + +V V +AL+ YA+C
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ AR +FD + ++ ++W+ ++ Y + L LF M ++ K +++T+ +++
Sbjct: 496 PQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSA 555
Query: 182 CMENGQTEESLEMLRKMQK-MGFKPNEITISSIL----------PACSILESLRMGKEVH 230
C G E + M K F P+ + ++ A I+E + + +V
Sbjct: 556 CGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVR 615
Query: 231 CYG 233
C+G
Sbjct: 616 CFG 618
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 151/347 (43%), Gaps = 68/347 (19%)
Query: 82 SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWN 141
S+ +++S + HG +G++ ++ + + LVS+Y K+AR VFD +P D W
Sbjct: 52 SKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWK 111
Query: 142 GVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM 201
+L Y NKE + E +++ + K
Sbjct: 112 VMLRCYCLNKE-----------------------------------SVEVVKLYDLLMKH 136
Query: 202 GFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSR 261
GF+ ++I S L AC+ L+ L GK++HC ++ D T L+ MYAKC ++ +
Sbjct: 137 GFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAH 196
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS--- 318
VF+ + ++VV W +MI + +E L+LF M + V N T+ ++ C+
Sbjct: 197 KVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLS 256
Query: 319 --------HSRLVDEGLQIFNSMGRDHL--------------VEPDANH-----YSCMVD 351
H LV G+++ + + L V + +H ++ M+
Sbjct: 257 ALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIV 316
Query: 352 VFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRVFKNVELAK 395
++ G ++EA Q+M ++P ++L C + +N+EL +
Sbjct: 317 GYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR 363
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+S V + AL+ Y KC + AR +FD + ++ ++W+++ Y G L +F E
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR-HGMVENVFVCSALVSMYARCL 120
M KPN T +SIL AC +N GK + + + + +V M AR
Sbjct: 537 MLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAG 596
Query: 121 SVKEARAVFDLMP 133
+++A + + MP
Sbjct: 597 ELEQALDIIEKMP 609
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 213 ILPACSILESLRMGKEVHC-YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
+L C+ ++SLR V GL +GD+S T LV +Y +R VFD +P+ D
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGL---MGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
W M+ ++ E + L++ +++ G + + + F+ L C+ + +D G +I
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ + + D + ++D++++ G + A+K + L W +++
Sbjct: 167 QLVK--VPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVV-CWTSMIAG 216
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 262/487 (53%), Gaps = 40/487 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D+ ++LI Y KC I+ AR+VF L VVS +L + Y L + + +F
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQ 618
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMV-ENVFVCSALVSMYARC 119
EM GV P+ +T ++I+ AC + + L G HG + G E ++ +L+ MY
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ EA A+F + ++ W ++
Sbjct: 679 RGMTEACALFSELSSPKSI----------------------------------VLWTGMM 704
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC--YGLRHR 237
G +NG EE+L+ ++M+ G P++ T ++L CS+L SLR G+ +H + L H
Sbjct: 705 SGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHD 764
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK-DVVAWNTMIIANAMHGNGKEALLLFE 296
+ +L+S T L+ MYAKC D+ S VFD M ++ +VV+WN++I A +G ++AL +F+
Sbjct: 765 LDELTSNT-LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFD 823
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+M +S + P+ +TF GVL+ CSH+ V +G +IF M + +E +H +CMVD+ R
Sbjct: 824 SMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRW 883
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
G L EA FI+ L+P A W +LLGACR+ + +I+A+KL ++EP N YV L
Sbjct: 884 GYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
NI S W +A+ +R +M+DRG+ K PG SW+ V R H F GD+S++ KI FL+
Sbjct: 944 NIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLE 1003
Query: 477 ELGQKMK 483
+L MK
Sbjct: 1004 DLYDLMK 1010
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 195/410 (47%), Gaps = 35/410 (8%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
L NA++ Y KC + A + FD + +DV +W S+ S Y + G P + L F + N
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQ 155
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
+ PN T S +L C+ ++ G+ IH ++ G+ N + ALV MYA+C + +AR
Sbjct: 156 IFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDAR 215
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK-------------- 172
VF+ + + V W + + Y E+ + +F RM EG + D
Sbjct: 216 RVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLG 275
Query: 173 -----------------ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
WN +I G + G ++E M+K K T+ S+L
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 216 ACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVA 274
A I+ +L +G VH ++ + ++ ++LV MY+KC + + VF+ + +K+ V
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 275 WNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMG 334
WN MI A +G + + LF +M SG + TFT +LS C+ S ++ G Q F+S+
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSII 454
Query: 335 RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ + + +VD++++ G L++A + +RM + W ++G+
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 173/336 (51%), Gaps = 37/336 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S++++ ++L+ Y KC+ +E A +VF+ L ++ V W ++ Y + G + + +F
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M +G + T +S+L C+ DL G H ++ + +N+FV +ALV MYA+C
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++++AR +F+ M RD V+WN ++ +Y ++ + LF RM+ G+ +D G
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD--------G 529
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
C+ +S L AC+ + L GK+VHC ++ +
Sbjct: 530 ACL---------------------------ASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
DL + ++L+ MY+KC + +R VF +P+ VV+ N + IA N +EA++LF+ ML
Sbjct: 563 DLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNAL-IAGYSQNNLEEAVVLFQEML 621
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
GV P+ +TF ++ C + G Q + +
Sbjct: 622 TRGVNPSEITFATIVEACHKPESLTLGTQFHGQITK 657
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 167/362 (46%), Gaps = 37/362 (10%)
Query: 10 ALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKP 69
+I+ Y + ++ AR +F ++ DVV+W + S + G + F M + VK
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 70 NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF 129
T+ S+L A + +L+ G +H A++ G+ N++V S+LVSMY++C ++ A VF
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 130 DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
+ + ++ V WN ++ Y N E K + LF M G D T+
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF-------------- 431
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALV 248
+S+L C+ L MG + H ++ ++ +L ALV
Sbjct: 432 ---------------------TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 249 YMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSV 308
MYAKC L +R +F+ M +D V WNT+I + N EA LF+ M G+ +
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQR 368
L C+H + +G Q+ + + ++ D + S ++D++S+ G + +A K
Sbjct: 531 CLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSS 589
Query: 369 MP 370
+P
Sbjct: 590 LP 591
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 138/314 (43%), Gaps = 45/314 (14%)
Query: 87 LNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTA 146
L GKA+H ++ G+ + +A+V +YA+C V A FD + +D +WN +L+
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 147 YFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPN 206
Y + IG + G+ S L + Q PN
Sbjct: 135 Y-----------------------------SSIG---KPGKVLRSFVSLFENQIF---PN 159
Query: 207 EITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNLSRNVFD 265
+ T S +L C+ ++ G+++HC ++ + S ALV MYAKC ++ +R VF+
Sbjct: 160 KFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE 219
Query: 266 MMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDE 325
+ + V W + G +EA+L+FE M G +P+ + F V++ + +
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 326 GLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF---IQRMPLEPTASAWGALL 382
+F M PD ++ M+ + G A ++ +++ ++ T S G++L
Sbjct: 280 ARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVL 334
Query: 383 GACRVFKNVELAKI 396
A + N++L +
Sbjct: 335 SAIGIVANLDLGLV 348
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 18/169 (10%)
Query: 222 SLRMGKEVHCYGL------RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
+LR+GK VH L R+G+ A+V +YAKC+ ++ + FD + +KDV AW
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGN-----AIVDLYAKCAQVSYAEKQFDFL-EKDVTAW 128
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
N+M+ + G + L F ++ + + PN TF+ VLS C+ V+ G QI SM +
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 336 DHLVEPDANHY--SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
L + N Y +VD++++ R+ +A + + + ++P W L
Sbjct: 189 MGL---ERNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLF 233
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 151/481 (31%), Positives = 258/481 (53%), Gaps = 35/481 (7%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+DVF+ +++++ Y KC ++ A +F + RDV+ WT++ + + G + + + EM
Sbjct: 149 NDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREM 208
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G + V + +L A +L D G+++HG+ R G+ NV V ++LV MYA+ +
Sbjct: 209 QNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ A VF M + AVSW ++I G
Sbjct: 269 EVASRVFSRMMFKTAVSWG-----------------------------------SLISGF 293
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+NG ++ E + +MQ +GF+P+ +T+ +L ACS + SL+ G+ VHCY L+ + D
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV 353
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+ TAL+ MY+KC L+ SR +F+ + +KD+V WNTMI +HGNG+E + LF M S
Sbjct: 354 TATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN 413
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
++P+ TF +LS SHS LV++G F+ M + ++P HY C++D+ +RAGR++EA
Sbjct: 414 IEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEA 473
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
I L+ W ALL C +N+ + IAA K+ + P++ G + N +A
Sbjct: 474 LDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATA 533
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
W E +++R LM++ + K PG S ++V + TF++ D S+ + + L L ++
Sbjct: 534 NKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQVLRNLKTEI 593
Query: 483 K 483
+
Sbjct: 594 R 594
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 162/364 (44%), Gaps = 38/364 (10%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+S LI + G+ I AR+VFD+L R V + S+ Y P + L ++ +M
Sbjct: 52 ISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
++P++ T + + AC L G+A+ AV G +VFVCS+++++Y +C + EA
Sbjct: 112 IQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
+F M RD + W ++T + + K + + M E
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE-------------------- 211
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTT 245
GF + + + +L A L +MG+ VH Y R + ++ T
Sbjct: 212 ---------------GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVET 256
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
+LV MYAK + ++ VF M K V+W ++I A +G +A M G +P
Sbjct: 257 SLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQP 316
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ VT GVL CS + G + + + H++ D + ++D++S+ G L + +
Sbjct: 317 DLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVL--DRVTATALMDMYSKCGALSSSREI 374
Query: 366 IQRM 369
+ +
Sbjct: 375 FEHV 378
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 273/481 (56%), Gaps = 20/481 (4%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N +I Y + I+ A +FD++ R++VSW S+ V G + + +F M +
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----R 199
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSVKEARA 127
+ V+ ++++ ++ +GK + M E N+ +A+++ YA+ + EA
Sbjct: 200 RDVVSWTAMVDGLAK-----NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
+F +MP RD SWN ++T + N+E K LF RM + V +W +I G +EN +
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKE 310
Query: 188 TEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCYGLR--HRIGDLSST 244
EE+L + KM + G KPN T SIL ACS L L G+++H + H+ ++ T
Sbjct: 311 NEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIV-T 369
Query: 245 TALVYMYAKCSDLNLSRNVFD--MMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+AL+ MY+K +L +R +FD ++ ++D+++WN+MI A HG+GKEA+ ++ M + G
Sbjct: 370 SALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
KP++VT+ +L CSH+ LV++G++ F + RD + HY+C+VD+ RAGRL +
Sbjct: 430 FKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDV 489
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
FI + S +GA+L AC V V +AK KK+ + ++ G YV + NI +
Sbjct: 490 TNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAAN 549
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
EA+++R+ MK++G+ K PGCSW++VG + H FVVGD+S+ + + L +L KM
Sbjct: 550 GKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFEALDSILSDLRNKM 609
Query: 483 K 483
+
Sbjct: 610 R 610
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 171/357 (47%), Gaps = 20/357 (5%)
Query: 11 LIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPN 70
LI K I AR++FD L RDVV+WT + + Y+ G R+ +F + + N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV---DSRKN 108
Query: 71 AVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD 130
VT ++++ K L +I + NV + ++ YA+ + +A +FD
Sbjct: 109 VVTWTAMVSGYLRSKQL----SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFD 164
Query: 131 LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEE 190
MP R+ VSWN ++ A ++ + LF RM R D +W A++ G +NG+ +E
Sbjct: 165 EMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDE 220
Query: 191 SLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYM 250
+ + M P IS ++ R+ + + + D +S ++
Sbjct: 221 ARRLFDCM------PERNIISWNAMITGYAQNNRIDEADQLFQVMPE-RDFASWNTMITG 273
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG-VKPNSVT 309
+ + ++N + +FD MP+K+V++W TMI + +EAL +F MLR G VKPN T
Sbjct: 274 FIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGT 333
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFI 366
+ +LS CS + EG QI + + + + + S +++++S++G L A K
Sbjct: 334 YVSILSACSDLAGLVEGQQIHQLISKS-VHQKNEIVTSALLNMYSKSGELIAARKMF 389
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 26/318 (8%)
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRM-SREGVKADKATWNAVIG 180
+ EAR +FD +P RD V+W V+T Y + + LF R+ SR+ V TW A++
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV----VTWTAMVS 117
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
G + + Q + + ++M + I + I ++L + E+ +
Sbjct: 118 GYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPER-------N 170
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ S ++V + ++ + N+F+ MP++DVV+W M+ A +G EA LF+ M
Sbjct: 171 IVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCM-- 228
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+ N +++ +++G + + +DE Q+F M E D ++ M+ F R ++
Sbjct: 229 --PERNIISWNAMITGYAQNNRIDEADQLFQVMP-----ERDFASWNTMITGFIRNREMN 281
Query: 361 EAYKFIQRMPLEPTASAWGALL-GACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFN 417
+A RMP E +W ++ G +N E + +K L D ++P N G YVS+ +
Sbjct: 282 KACGLFDRMP-EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKP-NVGTYVSILS 339
Query: 418 ILVSAKLWSEASQIRILM 435
E QI L+
Sbjct: 340 ACSDLAGLVEGQQIHQLI 357
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 251/444 (56%), Gaps = 12/444 (2%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
+ALI Y C + +R +FD R V+ W S+ S Y+ + + L +F+EM N +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETR 315
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
++ T+++++ AC L L +GK +H A + G+++++ V S L+ MY++C S EA +
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F + D + N ++ YF+ + +F R+ + + +WN++ G +NG T
Sbjct: 376 FSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSL----ISWNSMTNGFSQNGCT 431
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS----T 244
E+LE +M K+ +E+++SS++ AC+ + SL +G++V R I L S +
Sbjct: 432 VETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA---RATIVGLDSDQVVS 488
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
++L+ +Y KC + R VFD M K D V WN+MI A +G G EA+ LF+ M +G++
Sbjct: 489 SSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P +TF VL+ C++ LV+EG ++F SM DH PD H+SCMVD+ +RAG ++EA
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
++ MP + S W ++L C + K AA+K+ ++EP N YV L I ++
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGD 668
Query: 425 WSEASQIRILMKDRGITKTPGCSW 448
W ++ +R LM++ +TK PG SW
Sbjct: 669 WESSALVRKLMRENNVTKNPGSSW 692
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 205/458 (44%), Gaps = 60/458 (13%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D + N ++ + K + ARR+F+ + +DVV+ SL Y+ G + L +F E+
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM---------VENVFV------ 108
++ +A+T++++L AC+EL+ L GK IH + G+ + NV+
Sbjct: 183 FSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLR 239
Query: 109 ----------------CSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKE 152
SAL+S YA C V E+R +FD +R + WN +++ Y N
Sbjct: 240 MASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNM 299
Query: 153 YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ L LF+ M E + D T AVI C+ G E +M K G + + S+
Sbjct: 300 KMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 213 IL---PAC-SILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+L C S +E+ ++ EV Y D +++ +Y C ++ ++ VF+ +
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESY-------DTILLNSMIKVYFSCGRIDDAKRVFERIE 411
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
K +++WN+M + +G E L F M + + + V+ + V+S C+ ++ G Q
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 329 IFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLDEAYKFIQRM------PLEPTASAW-- 378
+F R +V D++ S ++D++ + G ++ + M P S +
Sbjct: 472 VF---ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Query: 379 -GALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSL 415
G A +FK + +A I ++ + NY L
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGL 566
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 110/205 (53%), Gaps = 1/205 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L N++I Y C I+ A+RVF+ + + ++SW S+++ + G + L FH+M
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ + V++SS++ AC+ + L G+ + A G+ + V S+L+ +Y +C V+
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
R VFD M D V WN +++ Y TN + + + LF +MS G++ + T+ V+ C
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 184 ENGQTEESLEMLRKMQ-KMGFKPNE 207
G EE ++ M+ GF P++
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDK 587
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 171/388 (44%), Gaps = 80/388 (20%)
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVEN-VFVCSALVSMYARCLSVKEARAVFDLMPHR 135
+L +CS + +G ++ G + + V V + L+ MY+R + AR +FD MP R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRM-SREGV-------------------------- 168
+ SWN ++ Y + E L F M R+G
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
+ D T N+++ G + NG EE+ LR +++ F + IT++++L AC+ LE+L+ GK+
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEA---LRLFKELNFSADAITLTTVLKACAELEALKCGKQ 208
Query: 229 VH------------------------CYGLRH--------RIGDLSSTTALVYMYAKCSD 256
+H C LR R D S +AL+ YA C
Sbjct: 209 IHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGR 268
Query: 257 LNLSRNVFDMMPKKDVVAWNTMI---IANAMHGNGKEALLLFENMLRSGVKPNSVTFTGV 313
+N SR +FD + V+ WN+MI IAN M EAL+LF N +R+ + +S T V
Sbjct: 269 VNESRGLFDRKSNRCVILWNSMISGYIANNMK---MEALVLF-NEMRNETREDSRTLAAV 324
Query: 314 LSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEP 373
++ C ++ G Q+ + L++ D S ++D++S+ G EA K +
Sbjct: 325 INACIGLGFLETGKQMHCHACKFGLID-DIVVASTLLDMYSKCGSPMEACKLFSEVESYD 383
Query: 374 TA---------SAWGALLGACRVFKNVE 392
T + G + A RVF+ +E
Sbjct: 384 TILLNSMIKVYFSCGRIDDAKRVFERIE 411
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SD +S++LI Y KC +E RRVFD +V D V W S+ S Y G + + +F
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M G++P +T +L AC+ + G K V HG V + S +V + AR
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 120 LSVKEARAVFDLMPHR-DAVSWNGVLTAYFTN 150
V+EA + + MP D W+ +L N
Sbjct: 601 GYVEEAINLVEEMPFDVDGSMWSSILRGCVAN 632
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 233 GLRHRIGDLSSTTA----LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG 288
GL + G LSS L+ MY++ + ++RN+FD MP ++ +WNTMI G
Sbjct: 50 GLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEK 109
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
+L F+ M + + ++ V+SG + + + ++FN+M E D +
Sbjct: 110 GTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVARRLFNAMP-----EKDVVTLNS 160
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAK 395
++ + G +EA + + + A +L AC + ++ K
Sbjct: 161 LLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGK 207
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/481 (32%), Positives = 262/481 (54%), Gaps = 45/481 (9%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRD-VVSWTSLSSCYVNCGLPRQGLAIFHE 61
SD ++ + L+ +Y K +E A++VFD+L RD V W +L + Y L +F +
Sbjct: 193 SDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSK 252
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M GV + T++S+L A + D+++G++IHG AV+ G ++ V +AL+ MY +
Sbjct: 253 MREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKW 312
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
++EA ++F+ M RD LF TWN+V+
Sbjct: 313 LEEANSIFEAMDERD----------------------LF-------------TWNSVL-- 335
Query: 182 CMEN--GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
C+ + G + +L + +M G +P+ +T++++LP C L SLR G+E+H Y + +
Sbjct: 336 CVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLL 395
Query: 240 DLSSTTALVY-----MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
+ S+ ++ MY KC DL +R VFD M KD +WN MI + G+ AL +
Sbjct: 396 NRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDM 455
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M R+GVKP+ +TF G+L CSHS ++EG M + + P ++HY+C++D+
Sbjct: 456 FSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLG 515
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
RA +L+EAY+ P+ W ++L +CR+ N +LA +A K+L ++EP + G YV
Sbjct: 516 RADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVL 575
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEF 474
+ N+ V A + E +R M+ + + KTPGCSW+ + N VHTF G++++ I+++
Sbjct: 576 MSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDW 635
Query: 475 L 475
L
Sbjct: 636 L 636
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 189/391 (48%), Gaps = 43/391 (10%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
+L++ Y KC + A VF RDV + +L S +V G P + + EM NG+
Sbjct: 100 TSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGIL 158
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ T S+L S+ +L+ K +HG A + G + +V S LV+ Y++ +SV++A+ V
Sbjct: 159 PDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKV 217
Query: 129 FDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
FD +P R D+V WN ++ Y +E L +FS+M EGV +
Sbjct: 218 FDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRH-------------- 263
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTA 246
TI+S+L A ++ + G+ +H ++ G D+ + A
Sbjct: 264 ---------------------TITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
L+ MY K L + ++F+ M ++D+ WN+++ + G+ L LFE ML SG++P+
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANH---YSCMVDVFSRAGRLDEAY 363
VT T VL C + +G +I M L+ +++ ++ ++D++ + G L +A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELA 394
M ++ +AS W ++ V ELA
Sbjct: 423 MVFDSMRVKDSAS-WNIMINGYGVQSCGELA 452
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 142/320 (44%), Gaps = 50/320 (15%)
Query: 70 NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV-FVCSALVSMYARCLSVKEARAV 128
N T + L C++ KD SG+ IHGF VR G +++ ++LV+MYA+C ++ A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F RD +N +++ + N + + M G+ DK T+ +++ G
Sbjct: 119 FG-GSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL-----KGSD 172
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALV 248
L ++K+ + FK +G + CY +G + LV
Sbjct: 173 AMELSDVKKVHGLAFK--------------------LGFDSDCY-----VG-----SGLV 202
Query: 249 YMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
Y+K + ++ VFD +P + D V WN ++ + ++ALL+F M GV +
Sbjct: 203 TSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSR 262
Query: 308 VTFTGVLSGCSHSRLVD-----EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
T T VLS + S +D GL + G D +V + ++D++ ++ L+EA
Sbjct: 263 HTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVS------NALIDMYGKSKWLEEA 316
Query: 363 YKFIQRMPLEPTASAWGALL 382
+ M E W ++L
Sbjct: 317 NSIFEAMD-ERDLFTWNSVL 335
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 98/225 (43%), Gaps = 23/225 (10%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCY--VNCGLPRQGLAIF 59
+S+ F+ N+L+ Y KC + AR VFD + +D SW + + Y +CG L +F
Sbjct: 399 SSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCG--ELALDMF 456
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCS----ALVSM 115
M GVKP+ +T +L ACS LN G+ F + V N+ S ++ M
Sbjct: 457 SCMCRAGVKPDEITFVGLLQACSHSGFLNEGR---NFLAQMETVYNILPTSDHYACVIDM 513
Query: 116 YARCLSVKEARAVFDLMPHRD-AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
R ++EA + P D V W +L++ K LAL + ++ +
Sbjct: 514 LGRADKLEEAYELAISKPICDNPVVWRSILSS--CRLHGNKDLALVAGKRLHELEPEHCG 571
Query: 175 WNAVIGGC-MENGQTEESLEMLRKMQKMGFKPNEITISSILPACS 218
++ +E G+ EE L++ M++ K P CS
Sbjct: 572 GYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKT--------PGCS 608
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/501 (29%), Positives = 275/501 (54%), Gaps = 40/501 (7%)
Query: 1 MTSDVFLSNALIHAYGKCKC-IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
M +++ NA+++ Y C +E A +F D+ ++ V+WT+L + + + G GL ++
Sbjct: 142 MEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMY 201
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M + ++ + A + + + +GK IH ++ G N+ V ++++ +Y RC
Sbjct: 202 KQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRC 261
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ EA+ F M +D ++WN +++
Sbjct: 262 GYLSEAKHYFHEMEDKDLITWNTLISE--------------------------------- 288
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
+E + E+L M ++ + GF PN T +S++ AC+ + +L G+++H R
Sbjct: 289 ---LERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 240 -DLSSTTALVYMYAKCSDLNLSRNVF-DMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
++ AL+ MYAKC ++ S+ VF +++ ++++V+W +M+I HG G EA+ LF+
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
M+ SG++P+ + F VLS C H+ LV++GL+ FN M ++ + PD + Y+C+VD+ RAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGACRVFK-NVELAKIAAKKLFDIEPNNPGNYVSLF 416
++ EAY+ ++RMP +P S WGA+LGAC+ K N ++++AA+K+ +++P G YV L
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
I + W + +++R +M+ G K G SW+ V N+V +F V D+ + +Y L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Query: 477 ELGQKMKLAGYKPDTDYVLQD 497
L ++ + AGY P+ D ++ D
Sbjct: 586 LLIEETREAGYVPELDSLVND 606
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 188/379 (49%), Gaps = 39/379 (10%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
L+ LI +Y + +E AR +FD++ RDVV+WT++ + Y + + FHEM
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC-LSVKE 124
G PN T+SS+L +C +K L G +HG V+ GM +++V +A+++MYA C ++++
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +F + ++ V+W ++T + + GL ++ +M +E
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM------------------LLE 207
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSS 243
N + P ITI+ + A + ++S+ GK++H ++ +L
Sbjct: 208 NAEV---------------TPYCITIA--VRASASIDSVTTGKQIHASVIKRGFQSNLPV 250
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+++ +Y +C L+ +++ F M KD++ WNT+ I+ + EALL+F+ G
Sbjct: 251 MNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL-ISELERSDSSEALLMFQRFESQGF 309
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
PN TFT +++ C++ ++ G Q+ + R + + ++D++++ G + ++
Sbjct: 310 VPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGF-NKNVELANALIDMYAKCGNIPDSQ 368
Query: 364 KFIQRMPLEPTASAWGALL 382
+ + +W +++
Sbjct: 369 RVFGEIVDRRNLVSWTSMM 387
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 267/473 (56%), Gaps = 16/473 (3%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPA 80
I A +VFD++ DV+S T++ +V + F + G++PN T +++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 81 CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSW 140
+ +D+ GK +H +A++ G+ NVFV SA+++ Y + ++ +AR FD + VS
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
+++ Y E+E+ L+LF M V TWNAVIGG + G+ EE++ M +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLR 218
Query: 201 MGFK-PNEITISSILPACSILESLRMGKEVHCYGLRH--RIGDLSSTTALVYMYAKCSDL 257
G PNE T + A S + S GK +H ++ + ++ +L+ Y+KC ++
Sbjct: 219 EGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 258 NLSRNVFDMMP--KKDVVAWNTMIIANAMHGNGKEALLLFENMLR-SGVKPNSVTFTGVL 314
S F+ + ++++V+WN+MI A +G G+EA+ +FE M++ + ++PN+VT GVL
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 315 SGCSHSRLVDEGLQIFNSMGRDH----LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
C+H+ L+ EG FN D+ L+E + HY+CMVD+ SR+GR EA + I+ MP
Sbjct: 339 FACNHAGLIQEGYMYFNKAVNDYDDPNLLELE--HYACMVDMLSRSGRFKEAEELIKSMP 396
Query: 371 LEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQ 430
L+P W ALLG C++ N LAK+AA K+ +++P + +YV L N + + W S
Sbjct: 397 LDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSL 456
Query: 431 IRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
IR MK+ G+ + GCSW++V +++ FV D++N D++Y L + Q ++
Sbjct: 457 IRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLE 509
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 107/226 (47%), Gaps = 36/226 (15%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S+VF+ +A+++ Y K + ARR FDD +VVS T+L S Y+ + L++F
Sbjct: 124 LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFR 183
Query: 61 EM------GWNG--------------------------VKPNAVTVSSILPACSELKDLN 88
M WN V PN T + A S +
Sbjct: 184 AMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHG 243
Query: 89 SGKAIHGFAVRH-GMVENVFVCSALVSMYARCLSVKEARAVFDLM--PHRDAVSWNGVLT 145
+GK+IH A++ G NVFV ++L+S Y++C +++++ F+ + R+ VSWN ++
Sbjct: 244 AGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIW 303
Query: 146 AYFTNKEYEKGLALFSRMSRE-GVKADKATWNAVIGGCMENGQTEE 190
Y N E+ +A+F +M ++ ++ + T V+ C G +E
Sbjct: 304 GYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQE 349
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 259/507 (51%), Gaps = 49/507 (9%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFD--DLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
V ++N I YGKC ++ A+ VF+ D R VVSW S+ Y G ++ M
Sbjct: 188 VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
KP+ T ++ +C + L G+ IH A+ G +++ + +SMY++
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
AR +FD+M R VSW +I G
Sbjct: 308 CSARLLFDIMTSRTCVSWT-----------------------------------VMISGY 332
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC----YGLRHRI 238
E G +E+L + M K G KP+ +T+ S++ C SL GK + YG +
Sbjct: 333 AEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKR-- 390
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
++ AL+ MY+KC ++ +R++FD P+K VV W TMI A++G EAL LF M
Sbjct: 391 DNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKM 450
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
+ KPN +TF VL C+HS +++G + F+ M + + + P +HYSCMVD+ R G+
Sbjct: 451 IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGK 510
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L+EA + I+ M +P A WGALL AC++ +NV++A+ AA+ LF++EP YV + NI
Sbjct: 511 LEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANI 570
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
+A +W ++IR +MK R I K PG S +QV + H+F VG+ + ++ IY L+
Sbjct: 571 YAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLN-- 628
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAE 505
L+ + D + +DV +E+ E
Sbjct: 629 ----GLSLFAKDKHVLYKDVYKEQSYE 651
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 188/423 (44%), Gaps = 65/423 (15%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDVF+ A + + KC ++ A +VF+ + RD +W ++ S + G + ++F EM
Sbjct: 85 SDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREM 144
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
N + P++VTV +++ + S K L +A+H +R G+ V V + +S Y +C +
Sbjct: 145 RLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDL 204
Query: 123 KEARAVFDLMPH--RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
A+ VF+ + R VSWN + AY E L+ M RE
Sbjct: 205 DSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE-------------- 250
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
FKP+ T ++ +C E+L G+ +H + +
Sbjct: 251 ---------------------EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQ 289
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+ + + MY+K D +R +FD+M + V+W MI A G+ EAL LF M+
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 349
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC----------M 349
+SG KP+ VT ++SGC F S+ ++ A+ Y C +
Sbjct: 350 KSGEKPDLVTLLSLISGCGK----------FGSLETGKWIDARADIYGCKRDNVMICNAL 399
Query: 350 VDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACR---VFKNVELAKIAAKKL-FDIE 405
+D++S+ G + EA P E T W ++ +F +E K+ +K + D +
Sbjct: 400 IDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIAGYALNGIF--LEALKLFSKMIDLDYK 456
Query: 406 PNN 408
PN+
Sbjct: 457 PNH 459
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 39/299 (13%)
Query: 47 VNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV 106
VN P + L +F EM G +PN T + AC+ L D+ + +H ++ +V
Sbjct: 28 VNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDV 87
Query: 107 FVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE 166
FV +A V M+ +C SV A VF+ MP RDA +WN +L+ + + +K +LF M
Sbjct: 88 FVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLN 147
Query: 167 GVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMG 226
+ D T +I ++ E+SL++L M +G +R+G
Sbjct: 148 EITPDSVTVMTLI----QSASFEKSLKLLEAMHAVG--------------------IRLG 183
Query: 227 KEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD--VVAWNTMIIANAM 284
+V ++ + Y KC DL+ ++ VF+ + + D VV+WN+M A ++
Sbjct: 184 VDVQ----------VTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSV 233
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN---SMGRDHLVE 340
G +A L+ MLR KP+ TF + + C + + +G I + +G D +E
Sbjct: 234 FGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIE 292
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 1/199 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ N I Y K + AR +FD + R VSWT + S Y G + LA+FH M
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 349
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG-MVENVFVCSALVSMYARCLSV 122
+G KP+ VT+ S++ C + L +GK I A +G +NV +C+AL+ MY++C S+
Sbjct: 350 KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
EAR +FD P + V+W ++ Y N + + L LFS+M K + T+ AV+ C
Sbjct: 410 HEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 469
Query: 183 MENGQTEESLEMLRKMQKM 201
+G E+ E M+++
Sbjct: 470 AHSGSLEKGWEYFHIMKQV 488
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
WN I + ESL + R+M++ GF+PN T + AC+ L + + VH + +
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 235 RHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALL 293
+ D+ TA V M+ KC+ ++ + VF+ MP++D WN M+ G+ +A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 294 LFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
LF M + + P+SVT ++ S + + + L+ +++G V+ + + +
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRLGVDVQVTVANTWISTY 198
Query: 354 SRAGRLDEA---YKFIQRMPLEPTASAWGALLGACRVF 388
+ G LD A ++ I R + T +W ++ A VF
Sbjct: 199 GKCGDLDSAKLVFEAIDRG--DRTVVSWNSMFKAYSVF 234
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 259 LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
+ R ++ + V AWN I + E+LLLF M R G +PN+ TF V C
Sbjct: 4 IHRRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKAC- 62
Query: 319 HSRLVDEGLQIFNSMGRDHLVE----PDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPT 374
+RL D G M HL++ D + VD+F + +D A K +RMP E
Sbjct: 63 -ARLADVGC---CEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ERD 117
Query: 375 ASAWGALL-GACR 386
A+ W A+L G C+
Sbjct: 118 ATTWNAMLSGFCQ 130
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 237/447 (53%), Gaps = 40/447 (8%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ + ++L Y KC +E + ++F + +D W S+ S + G R+ + +F EM
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G P+ T++++L CS L GK IHG+ +R G+ + + + SALV+MY++C S+K
Sbjct: 544 DDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR V+D +P D VS + +++ Y
Sbjct: 604 LARQVYDRLPELDPVSCSSLISGY-----------------------------------S 628
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---D 240
++G ++ + R M GF + ISSIL A ++ + +G +VH Y +IG +
Sbjct: 629 QHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAY--ITKIGLCTE 686
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
S ++L+ MY+K ++ F + D++AW +I + A HG EAL ++ M
Sbjct: 687 PSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKE 746
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G KP+ VTF GVLS CSH LV+E NSM +D+ +EP+ HY CMVD R+GRL
Sbjct: 747 KGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLR 806
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA FI M ++P A WG LL AC++ VEL K+AAKK ++EP++ G Y+SL NIL
Sbjct: 807 EAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILA 866
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCS 447
W E + R LMK G+ K PG S
Sbjct: 867 EVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 177/375 (47%), Gaps = 42/375 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DVF+ A++ Y KC + A VF + VVSWT + S Y L IF EM
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+GV+ N TV+S++ AC + +H + + G + V +AL+SMY++ +
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 124 EARAVF-DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ VF DL + N ++T++ +K+ K + LF+RM +EG++ D
Sbjct: 404 LSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTD----------- 452
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIGDL 241
E ++ S+L S+L+ L +GK+VH Y L+ + DL
Sbjct: 453 ------------------------EFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+ ++L +Y+KC L S +F +P KD W +MI +G +EA+ LF ML
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G P+ T VL+ CS + G +I R ++ + S +V+++S+ G L
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG-IDKGMDLGSALVNMYSKCGSLKL 604
Query: 362 AYKFIQRMP-LEPTA 375
A + R+P L+P +
Sbjct: 605 ARQVYDRLPELDPVS 619
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 188/387 (48%), Gaps = 50/387 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL--VGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
D ++ ALI Y K I+ + +VF+DL + R + ++S + P + + +F
Sbjct: 385 DSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITS-FSQSKKPGKAIRLFTR 443
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M G++ + +V S+L S L LN GK +HG+ ++ G+V ++ V S+L ++Y++C S
Sbjct: 444 MLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGS 500
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
++E+ +F +P +D W +++ + + + LFS M +G D
Sbjct: 501 LEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPD---------- 550
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-- 239
E T++++L CS SL GKE+H Y LR I
Sbjct: 551 -------------------------ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 240 -DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
DL S ALV MY+KC L L+R V+D +P+ D V+ +++I + HG ++ LLF +M
Sbjct: 586 MDLGS--ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHL-VEPDANHYSCMVDVFSRAG 357
+ SG +S + +L + S G Q+ + + L EP S ++ ++S+ G
Sbjct: 644 VMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVG--SSLLTMYSKFG 701
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGA 384
+D+ K ++ P AW AL+ +
Sbjct: 702 SIDDCCKAFSQIN-GPDLIAWTALIAS 727
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 53/383 (13%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLA----IFHEM 62
+ +ALI + K E A +VF D + +V W ++ + L Q +FHEM
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTI----IAGALRNQNYGAVFDLFHEM 242
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
KP++ T SS+L AC+ L+ L GK + ++ G E+VFVC+A+V +YA+C +
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHM 301
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
EA VF +P+ VSW +L+ Y + + L +F M GV+ + T +VI C
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
E+ ++ + K GF D S
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYL----------------------------------DSS 387
Query: 243 STTALVYMYAKCSDLNLSRNVF---DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
AL+ MY+K D++LS VF D + ++++V N MI + + +A+ LF ML
Sbjct: 388 VAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRML 445
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ G++ + + +LS L G Q+ + LV D S + ++S+ G L
Sbjct: 446 QEGLRTDEFSVCSLLSVLDCLNL---GKQVHGYTLKSGLV-LDLTVGSSLFTLYSKCGSL 501
Query: 360 DEAYKFIQRMPLEPTASAWGALL 382
+E+YK Q +P + A W +++
Sbjct: 502 EESYKLFQGIPFKDNA-CWASMI 523
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 38/358 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DVFL+ +L+ Y + A ++FD + DVVS + S Y L + L F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ G + N ++ S++ ACS L+ + + ++ G V SAL+ ++++ L +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFE 202
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A VF R+ + A+ WN +I G +
Sbjct: 203 DAYKVF-----------------------------------RDSLSANVYCWNTIIAGAL 227
Query: 184 ENGQTEESLEMLRKMQKMGF-KPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
N ++ +M +GF KP+ T SS+L AC+ LE LR GK V ++ D+
Sbjct: 228 RNQNYGAVFDLFHEMC-VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVF 286
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
TA+V +YAKC + + VF +P VV+W M+ + AL +F+ M SG
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
V+ N+ T T V+S C +V E Q+ + + D++ + ++ ++S++G +D
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFY-LDSSVAAALISMYSKSGDID 403
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 137/306 (44%), Gaps = 46/306 (15%)
Query: 82 SELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSW 140
S L +L + K + +R ++ +VF+ +L+S Y+ S+ +A +FD +P D VS
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
N +++ Y ++ +E ESL KM
Sbjct: 119 NIMISGYKQHRLFE-----------------------------------ESLRFFSKMHF 143
Query: 201 MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNL 259
+GF+ NEI+ S++ ACS L++ + V C+ ++ +AL+ +++K
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
+ VF +V WNT+I + N LF M KP+S T++ VL+ C+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHY---SCMVDVFSRAGRLDEAYKFIQRMPLEPTAS 376
E L+ F + + +++ A + +VD++++ G + EA + R+P P+
Sbjct: 264 L----EKLR-FGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVV 317
Query: 377 AWGALL 382
+W +L
Sbjct: 318 SWTVML 323
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 17/178 (9%)
Query: 218 SILESLRMGKEVHCYGLRHRI--GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
S L +LR K + + LR + D+ T +L+ Y+ + + +FD +P+ DVV+
Sbjct: 59 SRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSC 118
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ--IFNSM 333
N MI H +E+L F M G + N +++ V+S CS LQ +F+ +
Sbjct: 119 NIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACS-------ALQAPLFSEL 171
Query: 334 GRDHLVEPDANHY----SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL-GACR 386
H ++ Y S ++DVFS+ R ++AYK + R L W ++ GA R
Sbjct: 172 VCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYK-VFRDSLSANVYCWNTIIAGALR 228
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 254/463 (54%), Gaps = 14/463 (3%)
Query: 39 WTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAV 98
W + + N P + ++++ +M G+ P+ +T ++ + S L + G ++H V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 99 RHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLA 158
+ G+ ++F+C+ L+ MY AR +FD MPH++ V+WN +L AY + +
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 159 LFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF-KPNEITISSILPAC 217
+F MS D TW+++I G ++ G+ ++LE+ +M +MG K NE+T+ S++ AC
Sbjct: 196 VFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICAC 251
Query: 218 SILESLRMGKEVHCYGLR-HRIGDLSSTTALVYMYAKCSDLNLSRNVF--DMMPKKDVVA 274
+ L +L GK VH Y L H + T+L+ MYAKC + + +VF + + D +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 275 WNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMG 334
WN +I A HG +E+L LF M S + P+ +TF +L+ CSH LV E F S+
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL- 370
Query: 335 RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELA 394
++ EP + HY+CMVDV SRAG + +A+ FI MP++PT S GALL C N+ELA
Sbjct: 371 KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 395 KIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNR 454
+ KKL +++P+N G YV L N+ K + A +R M+ +G+ K G S L +
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGT 490
Query: 455 VHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQD 497
H F+ D+++ SDKIY L G M L D DY QD
Sbjct: 491 RHRFIAHDKTHFHSDKIYAVLQLTGAWMNL-----DVDYDDQD 528
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 112/236 (47%), Gaps = 34/236 (14%)
Query: 4 DVFLSNALIHAYG-------------------------------KCKCIEGARRVFDDLV 32
D+F+ N LIH YG K + AR VFD++
Sbjct: 142 DLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMS 201
Query: 33 GRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG-VKPNAVTVSSILPACSELKDLNSGK 91
RDVV+W+S+ YV G + L IF +M G K N VT+ S++ AC+ L LN GK
Sbjct: 202 ERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGK 261
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF--DLMPHRDAVSWNGVLTAYFT 149
+H + + + V + ++L+ MYA+C S+ +A +VF + DA+ WN ++ +
Sbjct: 262 TVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLAS 321
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKP 205
+ + L LF +M + D+ T+ ++ C G +E+ + +++ G +P
Sbjct: 322 HGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEP 377
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 258/453 (56%), Gaps = 12/453 (2%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ +S L+ + KC C+ AR+VFD+L + ++ + S Y+ GL ++ L + M
Sbjct: 68 DLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMS 127
Query: 64 WNGVKPNAVTVSSILPACSE-----LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
++G K + T+S +L A + + + + +H ++ + + + +ALV Y +
Sbjct: 128 YSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVK 187
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
++ AR VF+ M + V +++ Y E +F+ + D +NA+
Sbjct: 188 SGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK----DIVVYNAM 243
Query: 179 IGGCMENGQT-EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR 237
+ G +G+T + S++M MQ+ GF PN T +S++ ACS+L S +G++VH ++
Sbjct: 244 VEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSG 303
Query: 238 I-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+ + ++L+ MYAKC +N +R VFD M +K+V +W +MI +GN +EAL LF
Sbjct: 304 VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFT 363
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
M ++PN VTF G LS CSHS LVD+G +IF SM RD+ ++P HY+C+VD+ RA
Sbjct: 364 RMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRA 423
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNN-PGNYVSL 415
G L++A++F + MP P + W ALL +C + NVELA IAA +LF + + PG Y++L
Sbjct: 424 GDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLAL 483
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSW 448
N+ S W S+IR +MK R I+KT G SW
Sbjct: 484 SNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 149/347 (42%), Gaps = 33/347 (9%)
Query: 89 SGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYF 148
+GK IH ++ G ++ + L+ ++ +C + AR VFD +P ++N +++ Y
Sbjct: 52 AGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 149 TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
+ ++ L L RMS G KAD T + V+ G T L ++ ++
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 209 TISSILPACSILESLRMGKEVHCYGLRHRIGD--LSSTTALVYMYAKCSDLNLSRNVFDM 266
+ +L + ++ GK + + D + T+++ Y + + +F+
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 267 MPKKDVVAWNTMIIANAMHG-NGKEALLLFENMLRSGVKPNSVTFTGVLSGCS------- 318
KD+V +N M+ + G K ++ ++ +M R+G PN TF V+ CS
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 319 ----HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPT 374
H++++ G+ MG S ++D++++ G +++A + +M E
Sbjct: 292 GQQVHAQIMKSGVYTHIKMG------------SSLLDMYAKCGGINDARRVFDQMQ-EKN 338
Query: 375 ASAWGALLGACRVFKNVE--LAKIAAKKLFDIEPNNPGNYVSLFNIL 419
+W +++ N E L K F IEP NYV+ L
Sbjct: 339 VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP----NYVTFLGAL 381
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 244/418 (58%), Gaps = 5/418 (1%)
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
KP+ T +L + D+ G+ IHG V G +V V + L+ MY C + +AR
Sbjct: 113 KPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
+FD M +D WN +L Y E ++ +L M ++ +W VI G ++G+
Sbjct: 173 MFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMP--CWVRNEVSWTCVISGYAKSGR 230
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD--LSSTT 245
E++E+ ++M +P+E+T+ ++L AC+ L SL +G+ + C + HR + +S
Sbjct: 231 ASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERI-CSYVDHRGMNRAVSLNN 289
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
A++ MYAK ++ + +VF+ + +++VV W T+I A HG+G EAL +F M+++GV+P
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRP 349
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
N VTF +LS CSH VD G ++FNSM + + P+ HY CM+D+ RAG+L EA +
Sbjct: 350 NDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Query: 366 IQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLW 425
I+ MP + A+ WG+LL A V ++EL + A +L +EPNN GNY+ L N+ + W
Sbjct: 410 IKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRW 469
Query: 426 SEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
E+ +R +MK G+ K G S ++V NRV+ F+ GD ++ ++I+E L E+ +++
Sbjct: 470 DESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLV--GRDVVSWTSLSSCYVNCGLPRQGLAI 58
+ DV + NAL+ YGK ++ AR + + + R+ VSWT + S Y G + + +
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
F M V+P+ VT+ ++L AC++L L G+ I + GM V + +A++ MYA+
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
++ +A VF+ + R+ V+W ++ T+ + LA+F+RM + GV+ + T+ A+
Sbjct: 298 SGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 179 IGGCMENGQTEESLEMLRKMQ-KMGFKPN 206
+ C G + + M+ K G PN
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPN 386
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 191 SLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH----CYGLRHRIGDLSSTTA 246
++ + RK+ + KP+ T +L + + G+++H +G + T
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSV---HVVTG 156
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
L+ MY C L +R +FD M KDV WN ++ G EA L E M+ V+ N
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLE-MMPCWVR-N 214
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPD 342
V++T V+SG + S E +++F M ++ VEPD
Sbjct: 215 EVSWTCVISGYAKSGRASEAIEVFQRMLMEN-VEPD 249
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/466 (34%), Positives = 249/466 (53%), Gaps = 46/466 (9%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
A ++FD++ DV + P + ++++ EM GV P+ T + +L ACS+
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALV------------------------------ 113
L+ ++G A HG VRHG V N +V +AL+
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 114 -SMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
S YA+ + EA +FD MP++D V+WN ++T KE + LF R + + D
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK----DV 240
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
TWNA+I G + G +E+L + ++M+ G P+ +TI S+L AC++L L GK +H Y
Sbjct: 241 VTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 233 GLRHRIGDLSST--------TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAM 284
L +SS+ AL+ MYAKC ++ + VF + +D+ WNT+I+ A+
Sbjct: 301 ILE--TASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL 358
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDAN 344
H + + ++ +FE M R V PN VTF GV+ CSHS VDEG + F+ M + +EP+
Sbjct: 359 H-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIK 417
Query: 345 HYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDI 404
HY CMVD+ RAG+L+EA+ F++ M +EP A W LLGAC+++ NVEL K A +KL +
Sbjct: 418 HYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSM 477
Query: 405 EPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
+ G+YV L NI S W ++R + D + K G S ++
Sbjct: 478 RKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 136/298 (45%), Gaps = 42/298 (14%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N +I KCK ++ AR +FD +DVV+W ++ S YVNCG P++ L IF EM G
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVF-----VCSALVSMYARCLSVK 123
P+ VT+ S+L AC+ L DL +GK +H + + V + + +AL+ MYA+C S+
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A VF + RD +WN ++ + E + +F M R V ++ T+ VI C
Sbjct: 333 RAIEVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILACS 391
Query: 184 ENGQTEES---LEMLRKM------------------------------QKMGFKPNEITI 210
+G+ +E ++R M + M +PN I
Sbjct: 392 HSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVW 451
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSD---LNLSRNVFD 265
++L AC I ++ +GK + L R + L +YA + R +FD
Sbjct: 452 RTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFD 509
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/407 (20%), Positives = 163/407 (40%), Gaps = 99/407 (24%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++ NALI + C + A +FDD V+W+S++S Y G + + +F EM +
Sbjct: 148 YVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK 207
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+ V + ++ C + K+++S + + ++V +A++S Y C KEA
Sbjct: 208 ----DQVAWNVMITGCLKCKEMDSARELFDRFTE----KDVVTWNAMISGYVNCGYPKEA 259
Query: 126 RAVFDLM----PHRDAVS----------------------------------------WN 141
+F M H D V+ WN
Sbjct: 260 LGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWN 319
Query: 142 GVLTAYFTNKEYEKGLALFSRMSREGVK-ADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
++ Y ++ + +F GVK D +TWN +I G + E S+EM +MQ+
Sbjct: 320 ALIDMYAKCGSIDRAIEVF-----RGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQR 373
Query: 201 MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLS 260
+ PNE+T ++ ACS + G++ +L
Sbjct: 374 LKVWPNEVTFIGVILACSHSGRVDEGRKY---------------------------FSLM 406
Query: 261 RNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHS 320
R+++++ P ++ + M+ G +EA + E+M ++PN++ + +L C
Sbjct: 407 RDMYNIEP--NIKHYGCMVDMLGRAGQLEEAFMFVESM---KIEPNAIVWRTLLGACKIY 461
Query: 321 RLVDEGL---QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
V+ G + SM +D ++ Y + ++++ G+ D K
Sbjct: 462 GNVELGKYANEKLLSMRKD-----ESGDYVLLSNIYASTGQWDGVQK 503
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 107/255 (41%), Gaps = 49/255 (19%)
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
L + +FD +PK DV N ++ +A ++ + L+ M + GV P+ TFT VL
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 317 CS-----------HSRLVDEGLQIFNSMGRDHLVEPDAN--------------------H 345
CS H ++V G + N ++ L+ AN
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGF-VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVA 180
Query: 346 YSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD-I 404
+S M +++ G++DEA + MP + AW ++ C K ++ +A++LFD
Sbjct: 181 WSSMTSGYAKRGKIDEAMRLFDEMPYKDQV-AWNVMITGCLKCKEMD----SARELFDRF 235
Query: 405 EPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRG--------ITKTPGCSW---LQVGN 453
+ + ++ + V+ EA I M+D G ++ C+ L+ G
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGK 295
Query: 454 RVHTFVVGDRSNTGS 468
R+H +++ S + S
Sbjct: 296 RLHIYILETASVSSS 310
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 261/485 (53%), Gaps = 11/485 (2%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+L N+L+ Y + A +VF + DV S+ + Y G + L ++ +M +
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMV--ENVFVCSALVSMYARCLSVK 123
G++P+ TV S+L C L D+ GK +HG+ R G V N+ + +AL+ MY +C
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A+ FD M +D SWN ++ + + E A+F +M K D +WN+++ G
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP----KRDLVSWNSLLFGYS 342
Query: 184 ENGQTEESL-EMLRKMQKM-GFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GD 240
+ G + ++ E+ +M + KP+ +T+ S++ + L G+ VH +R ++ GD
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
++AL+ MY KC + + VF +KDV W +MI A HGNG++AL LF M
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
GV PN+VT VL+ CSHS LV+EGL +FN M +P+ HY +VD+ RAGR++
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 361 EAYKFIQ-RMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EA +Q +MP+ P+ S WG++L ACR +++E A++A +L +EP G YV L NI
Sbjct: 523 EAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIY 582
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGS-DKIYEFLDEL 478
+ W + + R M++RG+ KT G S + +H FV ++ N +I L L
Sbjct: 583 ATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Query: 479 GQKMK 483
+MK
Sbjct: 643 YNEMK 647
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 110/238 (46%), Gaps = 34/238 (14%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+S++ LSNAL+ Y KCK A+R FD + +D+ SW ++ +V G A+F +
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 62 M------GWNG---------------------------VKPNAVTVSSILPACSELKDLN 88
M WN VKP+ VT+ S++ + +L+
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 89 SGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYF 148
G+ +HG +R + + F+ SAL+ MY +C ++ A VF +D W ++T
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 149 TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ-KMGFKP 205
+ ++ L LF RM EGV + T AV+ C +G EE L + M+ K GF P
Sbjct: 446 FHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D FLS+ALI Y KC IE A VF +DV WTS+ + G +Q L +F
Sbjct: 399 LKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFG 458
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAV------RHGMVENVFVCSALVS 114
M GV PN VT+ ++L ACS +SG G V + G +LV
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACS-----HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVD 513
Query: 115 MYARCLSVKEARAVFD-LMPHRDAVS-WNGVLTAYFTNKEYEKG-LALFSRM----SREG 167
+ R V+EA+ + MP R + S W +L+A ++ E LAL + +EG
Sbjct: 514 LLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEG 573
Query: 168 VKADKATWNAVIGGCMENGQTEESLE 193
+ A +G + +T E++E
Sbjct: 574 GYVLLSNIYATVGRWGYSDKTREAME 599
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 167/488 (34%), Positives = 261/488 (53%), Gaps = 14/488 (2%)
Query: 10 ALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKP 69
+L+ AY + E A VF ++ R +W + S + +CG L++F EM + KP
Sbjct: 143 SLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKP 202
Query: 70 NAVTVSSILPACS-ELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
+ T SS++ ACS + ++ G+ +H +++G V ++++S Y + S +A
Sbjct: 203 DCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRE 262
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
+ + VSWN ++ A E EK L +F + + TW +I G NG
Sbjct: 263 LESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNI----VTWTTMITGYGRNGDG 318
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH-CYGLRHRIGDLSSTTAL 247
E++L +M K G + ++L ACS L L GK +H C G AL
Sbjct: 319 EQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL 378
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
V +YAKC D+ + F + KD+V+WNTM+ A +HG +AL L++NM+ SG+KP++
Sbjct: 379 VNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE----AY 363
VTF G+L+ CSHS LV+EG IF SM +D+ + + +H +CM+D+F R G L E A
Sbjct: 439 VTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLAT 498
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
+ + S+W LLGAC + EL + +K L EP+ ++V L N+ S
Sbjct: 499 TYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTG 558
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
W E +R M +RG+ KTPGCSW++VGN+V TFVVGD S+ +++ E L+ L +M+
Sbjct: 559 RWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQHEMR 618
Query: 484 LAGYKPDT 491
P+T
Sbjct: 619 ----NPET 622
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 123/475 (25%), Positives = 215/475 (45%), Gaps = 61/475 (12%)
Query: 12 IHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNA 71
I + K I AR+VFD + D V+W ++ + Y GL ++ +A+F ++ ++ KP+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 72 VTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDL 131
+ ++IL C+ L ++ G+ I +R G ++ V ++L+ MY +C A VF
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 132 M--PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
M R+ V+W +L AY +++E L +F M + A WN +I G G+ E
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFA----WNIMISGHAHCGKLE 186
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILES-LRMGKEVHCYGLRH------------ 236
L + ++M + FKP+ T SS++ ACS S + G+ VH L++
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 237 -----RIG-------DLSSTTALVYMY--------AKCSDLNLSRNVFDMMPKKDVVAWN 276
++G +L S L + K + + VF + P+K++V W
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWT 306
Query: 277 TMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRD 336
TMI +G+G++AL F M++SGV + + VL CS L+ G I
Sbjct: 307 TMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGC---- 362
Query: 337 HLVEPDANHYS----CMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVE 392
L+ Y+ +V+++++ G + EA + + + S W +L A V +
Sbjct: 363 -LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVS-WNTMLFAFGVHGLAD 420
Query: 393 LAKIAAKKLFD------IEPNNPGNYVSLFNILVSAKLWSEASQI-RILMKDRGI 440
A KL+D I+P+N ++ L + L E I ++KD I
Sbjct: 421 ----QALKLYDNMIASGIKPDNV-TFIGLLTTCSHSGLVEEGCMIFESMVKDYRI 470
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N++I A K E A VF +++V+WT++ + Y G Q L F EM +GV
Sbjct: 275 NSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVD 334
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
+ ++L ACS L L GK IHG + G +V +ALV++YA+C +KEA
Sbjct: 335 SDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRA 394
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F + ++D VSWN +L A+ + ++ L L+ M G+K D T+ ++ C +G
Sbjct: 395 FGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLV 454
Query: 189 EESLEMLRKMQKMGFKPNEI 208
EE + M K P E+
Sbjct: 455 EEGCMIFESMVKDYRIPLEV 474
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 105/227 (46%), Gaps = 25/227 (11%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
++ NAL++ Y KC I+ A R F D+ +D+VSW ++ + GL Q L ++ M +
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFV------CSALVSMYARC 119
G+KP+ VT +L CS +SG G + MV++ + + ++ M+ R
Sbjct: 433 GIKPDNVTFIGLLTTCS-----HSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRG 487
Query: 120 LSVKEARAVFD-----LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
+ EA+ + + + SW +L A T+ E G + S++ + +++ +
Sbjct: 488 GHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREV-SKVLKIAEPSEEMS 546
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE 221
+ + G+ +E ++ R+M + G K P CS +E
Sbjct: 547 FVLLSNLYCSTGRWKEGEDVRREMVERGMKKT--------PGCSWIE 585
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
T+ + AK + +R VFD MP+ D VAWNTM+ + + G +EA+ LF + S K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P+ +FT +LS C+ V G +I + + R + S ++D++ + A K
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNS-LIDMYGKCSDTLSANK 126
Query: 365 FIQRMPLEP-TASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ M + W +LL A + N E + A D+ P +NI++S
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAA----LDVFVEMPKRVAFAWNIMISG 178
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 278 bits (712), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 160/460 (34%), Positives = 253/460 (55%), Gaps = 11/460 (2%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM--GWNGVKPNAVTVSSILPAC 81
A VF + ++ W ++ + P ++IF +M VKP +T S+ A
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAY 136
Query: 82 SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWN 141
L G+ +HG ++ G+ ++ F+ + ++ MY C + EA +F M D V+WN
Sbjct: 137 GRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWN 196
Query: 142 GVLTAYFTNKEYEKGLALFSRM-SREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
++ + ++ LF M R GV +WN++I G + NG+ +++L+M R+MQ+
Sbjct: 197 SMIMGFAKCGLIDQAQNLFDEMPQRNGV-----SWNSMISGFVRNGRFKDALDMFREMQE 251
Query: 201 MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS--TTALVYMYAKCSDLN 258
KP+ T+ S+L AC+ L + G+ +H Y +R+R +L+S TAL+ MY KC +
Sbjct: 252 KDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRF-ELNSIVVTALIDMYCKCGCIE 310
Query: 259 LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
NVF+ PKK + WN+MI+ A +G + A+ LF + RSG++P+SV+F GVL+ C+
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Query: 319 HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAW 378
HS V + F M +++EP HY+ MV+V AG L+EA I+ MP+E W
Sbjct: 371 HSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIW 430
Query: 379 GALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDR 438
+LL ACR NVE+AK AAK L ++P+ YV L N S L+ EA + R+LMK+R
Sbjct: 431 SSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKER 490
Query: 439 GITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
+ K GCS ++V VH F+ ++ S +IY LD L
Sbjct: 491 QMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV N++I + KC I+ A+ +FD++ R+ VSW S+ S +V G + L +F EM
Sbjct: 191 DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ 250
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
VKP+ T+ S+L AC+ L G+ IH + VR+ N V +AL+ MY +C ++
Sbjct: 251 EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIE 310
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
E VF+ P + WN ++ N E+ + LFS + R G++ D ++ V+ C
Sbjct: 311 EGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACA 370
Query: 184 ENGQTEESLEMLRKMQK 200
+G+ + E R M++
Sbjct: 371 HSGEVHRADEFFRLMKE 387
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 179/397 (45%), Gaps = 60/397 (15%)
Query: 81 CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS-VKEARAVFDLMPHRDAVS 139
CS +++L K IH ++ G++ + S +++ S + A VF + H++
Sbjct: 35 CSTMREL---KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFV 91
Query: 140 WNGVLTAYFTNKEYEKGLALFSRM--SREGVKADKATWNAVIGGCMENGQTEESLEMLRK 197
WN ++ + + E +++F M S VK + T+ +V GQ + ++
Sbjct: 92 WNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGM 151
Query: 198 MQKMGFKPNEITISSIL---PACS-ILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYA 252
+ K G + + +++L C ++E+ R+ IG D+ + +++ +A
Sbjct: 152 VIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRI--------FLGMIGFDVVAWNSMIMGFA 203
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
KC ++ ++N+FD MP+++ V+WN+MI +G K+AL +F M VKP+ T
Sbjct: 204 KCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA---------- 362
+L+ C++ ++G I + R+ E ++ + ++D++ + G ++E
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNRF-ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKK 322
Query: 363 ------------------------YKFIQRMPLEPTASAWGALLGAC----RVFKNVELA 394
+ ++R LEP + ++ +L AC V + E
Sbjct: 323 QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF 382
Query: 395 KIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQI 431
++ +K + IEP+ +Y + N+L A L EA +
Sbjct: 383 RLMKEK-YMIEPSIK-HYTLMVNVLGGAGLLEEAEAL 417
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 256/464 (55%), Gaps = 10/464 (2%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D ++SN+L+ Y IE +VFD++ RDVVSW L S YV G + +F M
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 64 W-NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ +K + T+ S L ACS LK+L G+ I+ F V + +V + +ALV M+ +C +
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEM-SVRIGNALVDMFCKCGCL 198
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ARAVFD M ++ W ++ Y + ++ LF R + D W A++ G
Sbjct: 199 DKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVK----DVVLWTAMMNGY 254
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
++ + +E+LE+ R MQ G +P+ + S+L C+ +L GK +H Y +R+ D
Sbjct: 255 VQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDK 314
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
TALV MYAKC + + VF + ++D +W ++I AM+G AL L+ M
Sbjct: 315 VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENV 374
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
GV+ +++TF VL+ C+H V EG +IF+SM H V+P + H SC++D+ RAG LDE
Sbjct: 375 GVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDE 434
Query: 362 AYKFIQRMPLEPTAS---AWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
A + I +M E + + +LL A R + NV++A+ A+KL +E ++ + L ++
Sbjct: 435 AEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASV 494
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGD 462
SA W + + +R MKD GI K PGCS +++ H F+VGD
Sbjct: 495 YASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGD 538
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 164/358 (45%), Gaps = 67/358 (18%)
Query: 56 LAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSM 115
LA+F E+ G+ P+ T+ +L + L+ + G+ +HG+AV+ G+ + +V ++L+ M
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
YA ++ VFD MP RD VSWNG++++Y N +E + +F RMS+E
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQES-------- 142
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
K +E TI S L ACS L++L +G+ ++ + +
Sbjct: 143 --------------------------NLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT 176
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMM---------------------------- 267
+ ALV M+ KC L+ +R VFD M
Sbjct: 177 EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 268 ---PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVD 324
P KDVV W M+ EAL LF M +G++P++ +L+GC+ + ++
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+G I + + V D + +VD++++ G ++ A + + TAS W +L+
Sbjct: 297 QGKWIHGYINENR-VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLI 352
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 12/232 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+T D + AL+ Y KC CIE A VF ++ RD SWTSL G+ + L +++
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAI-HGFAVRHGMVENVFVCSALVSMYARC 119
EM GV+ +A+T ++L AC+ + G+ I H RH + CS L+ + R
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR--EGVKADKATWNA 177
+ EA + D M + V + + + + R++ E V+ ++ +
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHT 489
Query: 178 VIGGCMENGQT-EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
++ + E+ + RKM+ +G + P CS +E +G E
Sbjct: 490 LLASVYASANRWEDVTNVRRKMKDLGIRK--------FPGCSSIEIDGVGHE 533
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/454 (34%), Positives = 248/454 (54%), Gaps = 37/454 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D +++ +L+ Y + +E A++VFD++ R+ V W L Y+ + +F
Sbjct: 140 LDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFC 199
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV-FVCSALVSMYARC 119
M G+ +A+T+ ++ AC + GK +HG ++R ++ ++ ++++ MY +C
Sbjct: 200 LMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKC 259
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ AR +F+ R+ V W +++ + K ++A
Sbjct: 260 RLLDNARKLFETSVDRNVVMWTTLISGF--------------------AKCERAV----- 294
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
E+ ++ R+M + PN+ T+++IL +CS L SLR GK VH Y +R+ I
Sbjct: 295 ----------EAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIE 344
Query: 240 -DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
D + T+ + MYA+C ++ ++R VFDMMP+++V++W++MI A ++G +EAL F M
Sbjct: 345 MDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKM 404
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
V PNSVTF +LS CSHS V EG + F SM RD+ V P+ HY+CMVD+ RAG
Sbjct: 405 KSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGE 464
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
+ EA FI MP++P ASAWGALL ACR+ K V+LA A+KL +EP YV L NI
Sbjct: 465 IGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNI 524
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVG 452
A +W + +R M +G K G S +VG
Sbjct: 525 YADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 174/387 (44%), Gaps = 43/387 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLV--GRDVVSWTSLSSCYVNCGL--PRQGLAIF 59
+V L ++L +AY + ++ A F+ + R+ SW ++ S Y L ++
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+ M + ++ + + AC L L +G IHG A+++G+ ++ +V +LV MYA+
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+++ A+ VFD +P R++V W ++ Y + + LF M G+ D
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDA------- 210
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
+T+ ++ AC + + ++GK VH +R
Sbjct: 211 ----------------------------LTLICLVKACGNVFAGKVGKCVHGVSIRRSFI 242
Query: 240 DLSS--TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
D S +++ MY KC L+ +R +F+ ++VV W T+I A EA LF
Sbjct: 243 DQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQ 302
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
MLR + PN T +L CS + G + M R+ +E DA +++ +D+++R G
Sbjct: 303 MLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG-IEMDAVNFTSFIDMYARCG 361
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGA 384
+ A MP E +W +++ A
Sbjct: 362 NIQMARTVFDMMP-ERNVISWSSMINA 387
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 138/352 (39%), Gaps = 45/352 (12%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP-- 133
++L S+ K LN + +H + HG + V + S+L + Y + + A + F+ +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 134 HRDAVSWNGVLTAYFTNKE--YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES 191
R+ SWN +L+ Y +K Y L L++RM R D I C+ G E
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 192 LEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMY 251
+ + K G ++ S LV MY
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPS----------------------------------LVEMY 154
Query: 252 AKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
A+ + ++ VFD +P ++ V W ++ + E LF M +G+ +++T
Sbjct: 155 AQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLI 214
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
++ C + G + R ++ + ++D++ + LD A K + +
Sbjct: 215 CLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFE-TSV 273
Query: 372 EPTASAWGALL-GACRVFKNVELAKIAAKKLFD-IEPNNPGNYVSLFNILVS 421
+ W L+ G + + VE + + L + I PN +L ILVS
Sbjct: 274 DRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQ----CTLAAILVS 321
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 256/482 (53%), Gaps = 37/482 (7%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S++ + N LI Y KC R F + +D++SWT++ + Y + L +F ++
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDV 478
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
++ + + + SIL A S LK + K IH +R G+++ V + + LV +Y +C ++
Sbjct: 479 AKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNM 537
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A VF+ + +D VSW ++I
Sbjct: 538 GYATRVFESIKGKDVVSWT-----------------------------------SMISSS 562
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
NG E++E+ R+M + G + + + IL A + L +L G+E+HCY LR +
Sbjct: 563 ALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEG 622
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
S A+V MYA C DL ++ VFD + +K ++ + +MI A MHG GK A+ LF+ M
Sbjct: 623 SIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHE 682
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
V P+ ++F +L CSH+ L+DEG M ++ +EP HY C+VD+ RA + E
Sbjct: 683 NVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVE 742
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A++F++ M EPTA W ALL ACR E+ +IAA++L ++EP NPGN V + N+
Sbjct: 743 AFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQK 481
W++ ++R MK G+ K PGCSW+++ +VH F D+S+ S +IYE L E+ +K
Sbjct: 803 QGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRK 862
Query: 482 MK 483
++
Sbjct: 863 LE 864
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 150/313 (47%), Gaps = 36/313 (11%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
FL+ L+ YGKC ++ A +VFD++ R +W ++ YV+ G P LA++ M
Sbjct: 117 FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE 176
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
GV + ++L AC++L+D+ SG +H V+ G F+ +ALVSMYA+ + A
Sbjct: 177 GVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAA 236
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R +FD EKG D WN+++ +
Sbjct: 237 RRLFDGFQ--------------------EKG--------------DAVLWNSILSSYSTS 262
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--GDLSS 243
G++ E+LE+ R+M G PN TI S L AC ++GKE+H L+ +L
Sbjct: 263 GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYV 322
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
AL+ MY +C + + + M DVV WN++I + KEAL F +M+ +G
Sbjct: 323 CNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGH 382
Query: 304 KPNSVTFTGVLSG 316
K + V+ T +++
Sbjct: 383 KSDEVSMTSIIAA 395
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 220/472 (46%), Gaps = 74/472 (15%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+S++++ NALI Y +C + A R+ + DVV+W SL YV + ++ L F +
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 376
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC-L 120
M G K + V+++SI+ A L +L +G +H + ++HG N+ V + L+ MY++C L
Sbjct: 377 MIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNL 436
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ RA F M +D +SW V+ Y N + + L LF ++++ ++ D
Sbjct: 437 TCYMGRA-FLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEID--------- 486
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
E+ + SIL A S+L+S+ + KE+HC+ LR + D
Sbjct: 487 --------------------------EMILGSILRASSVLKSMLIVKEIHCHILRKGLLD 520
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
LV +Y KC ++ + VF+ + KDVV+W +MI ++A++GN EA+ LF M+
Sbjct: 521 TVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR------------------------- 335
+G+ +SV +LS + +++G +I + R
Sbjct: 581 TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQS 640
Query: 336 -----DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE---PTASAWGALLGACRV 387
D + Y+ M++ + G A + +M E P ++ ALL AC
Sbjct: 641 AKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSH 700
Query: 388 FKNVELAKIAAKKL---FDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMK 436
++ + K + +++EP P +YV L ++L A EA + +MK
Sbjct: 701 AGLLDEGRGFLKIMEHEYELEP-WPEHYVCLVDMLGRANCVVEAFEFVKMMK 751
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 131/298 (43%), Gaps = 42/298 (14%)
Query: 77 ILPACSELKDLNSGKAIHGFAVR-HGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR 135
+L C + + ++ G+ +H + E F+ LV MY +C S+ +A VFD MP R
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDR 145
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
A +WN +IG + NG+ +L +
Sbjct: 146 TAFAWN-----------------------------------TMIGAYVSNGEPASALALY 170
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR---HRIGDLSSTTALVYMYA 252
M+ G + ++L AC+ L +R G E+H ++ H G + ALV MYA
Sbjct: 171 WNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFI--VNALVSMYA 228
Query: 253 KCSDLNLSRNVFD-MMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
K DL+ +R +FD K D V WN+++ + + G E L LF M +G PNS T
Sbjct: 229 KNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIV 288
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
L+ C G +I S+ + + + ++ +++R G++ +A + +++M
Sbjct: 289 SALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 252/484 (52%), Gaps = 37/484 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ L ALI Y KC E + RV + + +DVV WT + S + G + L +F EM
Sbjct: 279 DMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G ++ ++S++ +C++L + G ++HG+ +RHG + ++L++MYA+C +
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
++ +F+ M RD VSWN +++ Y N + K L LF M + V+
Sbjct: 399 KSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ-------------- 444
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
+ + T+ S+L ACS +L +GK +HC +R I S
Sbjct: 445 --------------------QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSL 484
Query: 244 T-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
TALV MY+KC L ++ FD + KDVV+W +I HG G AL ++ L SG
Sbjct: 485 VDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG 544
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
++PN V F VLS CSH+ +V +GL+IF+SM RD VEP+ H +C+VD+ RA R+++A
Sbjct: 545 MEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+KF + P+ G +L ACR E+ I + + +++P + G+YV L + +
Sbjct: 605 FKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAM 664
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKM 482
K W + S+ M+ G+ K PG S +++ + TF + S+ SD L L ++M
Sbjct: 665 KRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLSREM 722
Query: 483 KLAG 486
G
Sbjct: 723 MQFG 726
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 193/395 (48%), Gaps = 43/395 (10%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+SD ++S++L++ Y K + AR+VF+++ RDVV WT++ CY G+ + ++ +E
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M + G+KP VT+ +L E+ L + +H FAV +G ++ V ++++++Y +C
Sbjct: 138 MRFQGIKPGPVTLLEMLSGVLEITQL---QCLHDFAVIYGFDCDIAVMNSMLNLYCKCDH 194
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
V +A+ +FD M RD VSWN +++ Y + + L L RM +G++ D+ T+ A
Sbjct: 195 VGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS--- 251
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-D 240
L + L MG+ +HC ++ D
Sbjct: 252 --------------------------------LSVSGTMCDLEMGRMLHCQIVKTGFDVD 279
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ TAL+ MY KC S V + +P KDVV W MI G ++AL++F ML+
Sbjct: 280 MHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ 339
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
SG +S V++ C+ D G + + R H D + ++ ++++ G LD
Sbjct: 340 SGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HGYTLDTPALNSLITMYAKCGHLD 398
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAK 395
++ +RM E +W A++ +NV+L K
Sbjct: 399 KSLVIFERMN-ERDLVSWNAIISG--YAQNVDLCK 430
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 154/333 (46%), Gaps = 62/333 (18%)
Query: 50 GLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVC 109
G +Q L+ F M N + P+ T S+L AC+ L+ L+ G +IH + +G + ++
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 110 SALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVK 169
S+LV++YA+ + AR VF+ M RD V W ++ Y SR G+
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCY----------------SRAGIV 128
Query: 170 ADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV 229
E+ ++ +M+ G KP +T+ +L +LE ++ + +
Sbjct: 129 G-------------------EACSLVNEMRFQGIKPGPVTLLEMLSG--VLEITQL-QCL 166
Query: 230 HCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNG 288
H + + + D++ +++ +Y KC + ++++FD M ++D+V+WNTMI A GN
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNM 226
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCS-----------HSRLVDEGLQIFNSMGRDH 337
E L L M G++P+ TF LS H ++V G +
Sbjct: 227 SEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV-------- 278
Query: 338 LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
D + + ++ ++ + G+ + +Y+ ++ +P
Sbjct: 279 ----DMHLKTALITMYLKCGKEEASYRVLETIP 307
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
+N+ I +G ++ L M P+ T S+L AC+ L+ L G +H L
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 235 RHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALL 293
+ D +++LV +YAK L +R VF+ M ++DVV W MI + G EA
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 294 LFENMLRSGVKPNSVTFTGVLSG--------CSHSRLVDEG----LQIFNSMGR------ 335
L M G+KP VT +LSG C H V G + + NSM
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCD 193
Query: 336 ---------DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLG 383
D + + D ++ M+ ++ G + E K + RM L P +GA L
Sbjct: 194 HVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLS 253
Query: 384 ACRVFKNVELAKI----AAKKLFDIEPNNPGNYVSLF 416
++E+ ++ K FD++ + ++++
Sbjct: 254 VSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMY 290
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 161/472 (34%), Positives = 244/472 (51%), Gaps = 37/472 (7%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
LS AL+ Y +C + V + R++V+W SL S Y + G+ Q L +F +M
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
+KP+A T++S + AC + GK IHG +R V + FV ++L+ MY++ SV A
Sbjct: 401 IKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNSLIDMYSKSGSVDSAS 459
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
VF+ + HR V TWN+++ G +NG
Sbjct: 460 TVFNQIKHRSVV-----------------------------------TWNSMLCGFSQNG 484
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTA 246
+ E++ + M + NE+T +++ ACS + SL GK VH + + DL + TA
Sbjct: 485 NSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTA 544
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
L+ MYAKC DLN + VF M + +V+W++MI A MHG A+ F M+ SG KPN
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFI 366
V F VLS C HS V+EG FN M + V P++ H++C +D+ SR+G L EAY+ I
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKEAYRTI 663
Query: 367 QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWS 426
+ MP AS WG+L+ CR+ + +++ K L DI ++ G Y L NI W
Sbjct: 664 KEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWE 723
Query: 427 EASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
E ++R MK + K PG S +++ +V F G+ + +D+IY FL L
Sbjct: 724 EFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 202/405 (49%), Gaps = 50/405 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D + +L+ YG+ + A +VFD + RD+V+W++L S + G + L +F M
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+GV+P+AVT+ S++ C+EL L +++HG R + +C++L++MY++C +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+ +F+ + ++AVSW ++++Y + EK L FS M + G+
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGI--------------- 299
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD--L 241
+PN +T+ S+L +C ++ +R GK VH + +R +
Sbjct: 300 --------------------EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE 339
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
S + ALV +YA+C L+ V ++ +++VAWN++I A G +AL LF M+
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANH---YSCMVDVFSRAGR 358
+KP++ T +S C ++ LV G QI H++ D + + ++D++S++G
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQI-----HGHVIRTDVSDEFVQNSLIDMYSKSGS 454
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD 403
+D A ++ + W ++L C +N + A LFD
Sbjct: 455 VDSASTVFNQIK-HRSVVTWNSML--CGFSQNGN--SVEAISLFD 494
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 178/376 (47%), Gaps = 42/376 (11%)
Query: 11 LIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPN 70
LI +Y + +R VF+ D + L C V C L + ++H + + +
Sbjct: 40 LIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQIS 99
Query: 71 AVTVSSILPACSELKD-LNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF 129
S+L AC+ ++ L+ G +HG ++ G+ ++ + ++L+ MY + ++ +A VF
Sbjct: 100 KFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVF 159
Query: 130 DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
D MP RD V+W+ ++++ N E K L +F M +GV+ D T +V+ GC E G
Sbjct: 160 DGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELG--- 216
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST--TAL 247
LR+ + VH R ++ DL T +L
Sbjct: 217 --------------------------------CLRIARSVHGQITR-KMFDLDETLCNSL 243
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ MY+KC DL S +F+ + KK+ V+W MI + ++AL F M++SG++PN
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYS-CMVDVFSRAGRLDEAYKFI 366
VT VLS C L+ EG + R L +P+ S +V++++ G+L + + +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRREL-DPNYESLSLALVELYAECGKLSDC-ETV 361
Query: 367 QRMPLEPTASAWGALL 382
R+ + AW +L+
Sbjct: 362 LRVVSDRNIVAWNSLI 377
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD F+ N+LI Y K ++ A VF+ + R VV+W S+ + G + +++F M
Sbjct: 437 SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ ++ N VT +++ ACS + L GK +H + G+ +++F +AL+ MYA+C +
Sbjct: 497 YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDL 555
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A VF M R VSW+ ++ AY + ++ F++M G K ++ + V+ C
Sbjct: 556 NAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSAC 615
Query: 183 MENGQTEESLEMLRKMQKMGFKPN 206
+G EE M+ G PN
Sbjct: 616 GHSGSVEEGKYYFNLMKSFGVSPN 639
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 2/202 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+F ALI Y KC + A VF + R +VSW+S+ + Y G ++ F++M
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMV 597
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G KPN V ++L AC + GK G+ N + + + +R +K
Sbjct: 598 ESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLK 657
Query: 124 EARAVFDLMPH-RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
EA MP DA W ++ +++ + A+ + +S + V D + +
Sbjct: 658 EAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLS-DIVTDDTGYYTLLSNIY 716
Query: 183 MENGQTEESLEMLRKMQKMGFK 204
E G+ EE + M+ K
Sbjct: 717 AEEGEWEEFRRLRSAMKSSNLK 738
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/488 (30%), Positives = 256/488 (52%), Gaps = 40/488 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVG-RDVVSWTSLSSCYVNCGLPRQGLAIF 59
+ ++ + NA+I +Y C + A+RVFD L G +D++SW S+ + + L +F
Sbjct: 234 LQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELF 293
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M + V+ + T + +L ACS + GK++HG ++ G+ + +AL+SMY +
Sbjct: 294 IQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ- 352
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
F E L+LF + + D +WN++I
Sbjct: 353 ----------------------------FPTGTMEDALSLFESLKSK----DLISWNSII 380
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
G + G +E++++ ++ K ++ S++L +CS L +L++G+++H L + G
Sbjct: 381 TGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH--ALATKSG 438
Query: 240 DLSS---TTALVYMYAKCSDLNLSRNVFDMMPKK-DVVAWNTMIIANAMHGNGKEALLLF 295
+S+ ++L+ MY+KC + +R F + K VAWN MI+ A HG G+ +L LF
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
M VK + VTFT +L+ CSH+ L+ EGL++ N M + ++P HY+ VD+ R
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSL 415
AG +++A + I+ MPL P LG CR +E+A A L +IEP + YVSL
Sbjct: 559 AGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSL 618
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL 475
++ K W E + ++ +MK+RG+ K PG SW+++ N+V F DRSN IY +
Sbjct: 619 SHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMI 678
Query: 476 DELGQKMK 483
+L Q+M+
Sbjct: 679 KDLTQEMQ 686
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 191/434 (44%), Gaps = 79/434 (18%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+++SN ++ +Y K + A +FD++ RD VSW ++ S Y +CG +F M
Sbjct: 33 SDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCM 92
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+G + + S +L + +K + G+ +HG ++ G NV+V S+LV MYA+C V
Sbjct: 93 KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERV 152
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMS-REGVKADKATWNAVIGG 181
++A F + ++VSWN ++ + ++ + L M + V D T
Sbjct: 153 EDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGT------- 205
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC----YGLRHR 237
F P +T+ C++L K+VH GL+H
Sbjct: 206 ---------------------FAP-LLTLLDDPMFCNLL------KQVHAKVLKLGLQHE 237
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFD-MMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
I + A++ YA C ++ ++ VFD + KD+++WN+MI + H + A LF
Sbjct: 238 I---TICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFI 294
Query: 297 NMLRSGVKPNSVTFTGVLSGCS-----------HSRLVDEGLQIFNSMGR---------- 335
M R V+ + T+TG+LS CS H ++ +GL+ S
Sbjct: 295 QMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFP 354
Query: 336 -----------DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGAL 381
+ L D ++ ++ F++ G ++A KF + ++ A+ AL
Sbjct: 355 TGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSAL 414
Query: 382 LGACRVFKNVELAK 395
L +C ++L +
Sbjct: 415 LRSCSDLATLQLGQ 428
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 141/334 (42%), Gaps = 83/334 (24%)
Query: 94 HGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEY 153
H +A++ G + +++V + ++ Y + + A +FD MP RD+VSWN +++ Y + +
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSI 213
E LF+ M R G D +++ ++ G I+S+
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKG----------------------------IASV 114
Query: 214 LPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
+ +G++VH GL + G ++ ++LV MYAKC + + F + +
Sbjct: 115 -------KRFDLGEQVH--GLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEP 165
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENM-LRSGVKPNSVTFTGVLS------GCS----- 318
+ V+WN +I + K A L M +++ V ++ TF +L+ C+
Sbjct: 166 NSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQV 225
Query: 319 HSRLVDEGLQ------------------------IFNSMGRDHLVEPDANHYSCMVDVFS 354
H++++ GLQ +F+ +G D ++ M+ FS
Sbjct: 226 HAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG----SKDLISWNSMIAGFS 281
Query: 355 RAGRLDEAYKF---IQRMPLEPTASAWGALLGAC 385
+ + A++ +QR +E + LL AC
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSAC 315
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 241/476 (50%), Gaps = 43/476 (9%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+FL N LI Y KC C+ +R++FD + RD VS+ S+ YV CGL +F M
Sbjct: 154 SDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM 213
Query: 63 --------GWNGV------KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFV 108
WN + + V ++S L A KDL S ++ V+HG +E+
Sbjct: 214 PMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIED--- 270
Query: 109 CSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
A+ +FD+MP RD V+W ++ Y LF +M V
Sbjct: 271 ----------------AKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGK 227
A +N+++ G ++N E+LE+ M+K P++ T+ +LPA + L L
Sbjct: 315 VA----YNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAI 370
Query: 228 EVHCYGLRHRI---GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAM 284
++H Y + + G L AL+ MY+KC + + VF+ + K + WN MI A+
Sbjct: 371 DMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAI 428
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDAN 344
HG G+ A + + R +KP+ +TF GVL+ CSHS LV EGL F M R H +EP
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 345 HYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDI 404
HY CMVD+ SR+G ++ A I+ MP+EP W L AC K E ++ AK L
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 405 EPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVV 460
NP +YV L N+ S +W + ++R +MK+R I K PGCSW+++ RVH F V
Sbjct: 549 AGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 148/329 (44%), Gaps = 43/329 (13%)
Query: 34 RDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAI 93
D W ++ + + PRQ L + M NGV + ++S +L ACS L + G I
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 94 HGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEY 153
HGF + G+ ++F+ + L+ +Y +C + +R +FD MP RD+VS+N ++ Y
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSI 213
LF M E + +WN++I G QT + +++ K+ P +
Sbjct: 204 VSARELFDLMPME--MKNLISWNSMISG---YAQTSDGVDIASKL--FADMPEK------ 250
Query: 214 LPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV 273
DL S +++ Y K + ++ +FD+MP++DVV
Sbjct: 251 --------------------------DLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVV 284
Query: 274 AWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
W TMI A G A LF+ M V V + +++G ++ E L+IF+ M
Sbjct: 285 TWATMIDGYAKLGFVHHAKTLFDQMPHRDV----VAYNSMMAGYVQNKYHMEALEIFSDM 340
Query: 334 GRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
++ + PD ++ ++ GRL +A
Sbjct: 341 EKESHLLPDDTTLVIVLPAIAQLGRLSKA 369
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 154/370 (41%), Gaps = 66/370 (17%)
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALV-----------SMYARCLSVKEA 125
+L +C D+N IHG ++ G+++N + + +V + +ARC+ +
Sbjct: 18 VLGSCKTSDDVNQ---IHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYH 74
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
F D WN V+ ++ K+ + L L M GV DK
Sbjct: 75 VCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDK------------- 121
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLS 242
++S +L ACS L ++ G ++H G + G DL
Sbjct: 122 ----------------------FSLSLVLKACSRLGFVKGGMQIH--GFLKKTGLWSDLF 157
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
L+ +Y KC L LSR +FD MPK+D V++N+MI G A LF+ M
Sbjct: 158 LQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME- 216
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
N +++ ++SG + + +G+ I + + D + E D ++ M+D + + GR+++A
Sbjct: 217 -MKNLISWNSMISGYAQT---SDGVDIASKLFAD-MPEKDLISWNSMIDGYVKHGRIEDA 271
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPN-NPGNYVSLFNILVS 421
MP + W ++ V AK LFD P+ + Y S+ V
Sbjct: 272 KGLFDVMPRRDVVT-WATMIDGYAKLGFVH----HAKTLFDQMPHRDVVAYNSMMAGYVQ 326
Query: 422 AKLWSEASQI 431
K EA +I
Sbjct: 327 NKYHMEALEI 336
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 148/427 (34%), Positives = 236/427 (55%), Gaps = 7/427 (1%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
A RVF + +V+ + ++ CY G P + L+ F M G+ + T + +L +CS
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
L DL GK +HG +R G + +V +Y + +A+ VFD M R+ V WN +
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
+ + + + E+GL LF +MS + +WN++I + G+ E+LE+ +M GF
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREALELFCEMIDQGF 230
Query: 204 KPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD--LSSTTALVYMYAKCSDLNLSR 261
P+E T+ ++LP + L L GK +H + ++ ALV Y K DL +
Sbjct: 231 DPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAAT 290
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG-VKPNSVTFTGVLSGCSHS 320
+F M +++VV+WNT+I +A++G G+ + LF+ M+ G V PN TF GVL+ CS++
Sbjct: 291 AIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYT 350
Query: 321 RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGA 380
V+ G ++F M +E HY MVD+ SR+GR+ EA+KF++ MP+ A+ WG+
Sbjct: 351 GQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGS 410
Query: 381 LLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
LL ACR +V+LA++AA +L IEP N GNYV L N+ W + ++R LMK +
Sbjct: 411 LLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRL 470
Query: 441 TKTPGCS 447
K+ G S
Sbjct: 471 RKSTGQS 477
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 2/199 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+V + N +I + +E +F + R +VSW S+ S CG R+ L +F EM
Sbjct: 167 NVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMI 226
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVEN-VFVCSALVSMYARCLSV 122
G P+ TV ++LP + L L++GK IH A G+ ++ + V +ALV Y + +
Sbjct: 227 DQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDL 286
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAVIGG 181
+ A A+F M R+ VSWN +++ N + E G+ LF M EG V ++AT+ V+
Sbjct: 287 EAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLAC 346
Query: 182 CMENGQTEESLEMLRKMQK 200
C GQ E E+ M +
Sbjct: 347 CSYTGQVERGEELFGLMME 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 124/329 (37%), Gaps = 72/329 (21%)
Query: 93 IHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKE 152
IH +RH + + + + +S+ + A VF + + + + +N ++ Y
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGP 82
Query: 153 YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ L+ FS M G+ AD E T +
Sbjct: 83 PLESLSFFSSMKSRGIWAD-----------------------------------EYTYAP 107
Query: 213 ILPACSILESLRMGKEVHCYGLR---HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
+L +CS L LR GK VH +R HR+G + +V +Y + ++ VFD M +
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIR--IGVVELYTSGGRMGDAQKVFDEMSE 165
Query: 270 KDVVAWNTMI--------IANAMH-----------------------GNGKEALLLFENM 298
++VV WN MI + +H G +EAL LF M
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
+ G P+ T VL + ++D G I ++ L + + +VD + ++G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRV 387
L+ A ++M S W L+ V
Sbjct: 286 LEAATAIFRKMQRRNVVS-WNTLISGSAV 313
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 252/444 (56%), Gaps = 45/444 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRD--VVSWTSLSSCYVNCGLPRQGLAI 58
+ +++ +S+ L+ Y C E A VFD + RD +W SL S Y G +A+
Sbjct: 123 LRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMAL 182
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+ +M +GVKP+ T +L AC + + G+AIH V+ G +V+V +ALV MYA+
Sbjct: 183 YFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAK 242
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
C + +AR VFD++PH+D VSW N++
Sbjct: 243 CGDIVKARNVFDMIPHKDYVSW-----------------------------------NSM 267
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
+ G + +G E+L++ R M + G +P+++ ISS+L + + S + G+++H + +R +
Sbjct: 268 LTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGM 324
Query: 239 G-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
+LS AL+ +Y+K L + +FD M ++D V+WN +I A++ + NG L FE
Sbjct: 325 EWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQ 381
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
M R+ KP+ +TF VLS C+++ +V++G ++F+ M +++ ++P HY+CMV+++ RAG
Sbjct: 382 MHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Query: 358 RLDEAYKFI-QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
++EAY I Q M LE + WGALL AC + N ++ ++AA++LF++EP+N N+ L
Sbjct: 442 MMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLI 501
Query: 417 NILVSAKLWSEASQIRILMKDRGI 440
I AK + ++R +M DRG+
Sbjct: 502 RIYSKAKRAEDVERVRQMMVDRGL 525
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 156/316 (49%), Gaps = 49/316 (15%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
+S+L C L+ ++ G +H + + N+ + S LV +YA C + A VFD M
Sbjct: 96 ASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSK 155
Query: 135 RDA--VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
RD+ +WN +++ Y +YE +AL+ +M+ +GVK D+ T+ V
Sbjct: 156 RDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRV-------------- 201
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMY 251
L AC + S+++G+ +H ++ G D+ ALV MY
Sbjct: 202 ---------------------LKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMY 240
Query: 252 AKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
AKC D+ +RNVFDM+P KD V+WN+M+ HG EAL +F M+++G++P+ V +
Sbjct: 241 AKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS 300
Query: 312 GVLS---GCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQR 368
VL+ H R + G I M E + + + ++ ++S+ G+L +A +
Sbjct: 301 SVLARVLSFKHGRQL-HGWVIRRGM------EWELSVANALIVLYSKRGQLGQACFIFDQ 353
Query: 369 MPLEPTASAWGALLGA 384
M LE +W A++ A
Sbjct: 354 M-LERDTVSWNAIISA 368
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 251/480 (52%), Gaps = 36/480 (7%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
++ L+ Y +C + AR+VFD++ RD+ + G ++ L F EM +G
Sbjct: 53 IAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDG 112
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
+K +A V S+L A L D GK IH ++ + F+ S+L+ MY++ V AR
Sbjct: 113 LKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNAR 172
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG----- 181
VF + +D V +N +++ Y N + ++ L L M G+K D TWNA+I G
Sbjct: 173 KVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMR 232
Query: 182 ------------CME------------------NGQTEESLEMLRKMQKMGFKPNEITIS 211
C++ N Q E++ + ++M G PN TI
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 212 SILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNLSRNVFDMMPKK 270
++LPAC+ L ++ GKE+H Y + + D +AL+ MY KC ++ + +F PKK
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
V +N+MI A HG +A+ LF+ M +G K + +TFT +L+ CSH+ L D G +F
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF 412
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKN 390
M + + P HY+CMVD+ RAG+L EAY+ I+ M +EP WGALL ACR N
Sbjct: 413 LLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGN 472
Query: 391 VELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
+ELA+IAAK L ++EP N GN + L ++ +A W +++ ++K + + G SW++
Sbjct: 473 MELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVE 532
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFD----DLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV NALI + + E + + D DVVSWTS+ S V+ + F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M +G+ PN+ T+ ++LPAC+ L + GK IHG++V G+ ++ FV SAL+ MY +C
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ EA +F P + V++N ++ Y + +K + LF +M G K D T+ A++
Sbjct: 337 GFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAIL 396
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP--ACSILESLRMGKEVHCY 232
C G T+ + MQ N+ I L AC + R GK V Y
Sbjct: 397 TACSHAGLTDLGQNLFLLMQ------NKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 132/300 (44%), Gaps = 40/300 (13%)
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
G+ +H V G+ + + LV+ Y C V +AR VFD MP RD ++ A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
N Y++ L F M ++G+K D
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDA-----------------------------------FI 119
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMP 268
+ S+L A L GK +HC L+ D ++L+ MY+K ++ +R VF +
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
++D+V +N MI A + EAL L ++M G+KP+ +T+ ++SG SH R ++ +
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGAC 385
I M D +PD ++ ++ + ++A+ ++M L P ++ LL AC
Sbjct: 240 ILELMCLDG-YKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPAC 298
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 167/561 (29%), Positives = 282/561 (50%), Gaps = 81/561 (14%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQG----- 55
+ SD+ + N+ I Y + GARRVFD++ +D++SW SL S GL ++G
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLS-----GLSQEGTFGFE 259
Query: 56 -LAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
+ IF +M GV+ + V+ +S++ C DL + IHG ++ G + V + L+S
Sbjct: 260 AVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMS 319
Query: 115 MYARCLSVKEARAVFDLMPHRDAVSWN------------------------------GVL 144
Y++C ++ ++VF M R+ VSW G++
Sbjct: 320 RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
Query: 145 TAYFTNKEYEKGLALFSRMSREGV---------------------KADKA---------- 173
A N++ ++GL + + G A KA
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 174 TWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE--SLRMGKEVHC 231
+WNA+I G +NG + E+L+M PNE T S+L A + E S++ G+ H
Sbjct: 440 SWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 232 YGLRHRIGDLSS-TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
+ L+ + ++AL+ MYAK +++ S VF+ M +K+ W ++I A + HG+ +
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFET 558
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
+ LF M++ V P+ VTF VL+ C+ +VD+G +IFN M + +EP HYSCMV
Sbjct: 559 VMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMV 618
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPG 410
D+ RAGRL EA + + +P P S ++LG+CR+ NV++ A+ +++P G
Sbjct: 619 DMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSG 678
Query: 411 NYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGN-----RVHTFVVGDRSN 465
+YV ++NI + W +A++IR M+ + ++K G SW+ VG+ + F GD+S+
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 738
Query: 466 TGSDKIYEFLDELGQKMKLAG 486
SD+IY ++ +G +M L G
Sbjct: 739 PKSDEIYRMVEIIGLEMNLEG 759
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 47/384 (12%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
TS V +SNA++ Y K + A +F++LV DVVSW ++ S + + + L
Sbjct: 107 FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVV 163
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M GV +A T S+ L C + G + V+ G+ ++ V ++ ++MY+R
Sbjct: 164 RMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSG 223
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE-KGLALFSRMSREGVKADKATWNAVI 179
S + AR VFD M +D +SWN +L+ + + + +F M REGV+ D ++ +VI
Sbjct: 224 SFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVI 283
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
C E L++ R++ + K S+L +IL S
Sbjct: 284 TTCCH----ETDLKLARQIHGLCIKRG---YESLLEVGNILMS----------------- 319
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
Y+KC L ++VF M +++VV+W TMI +N +A+ +F NM
Sbjct: 320 ----------RYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNK-----DDAVSIFLNMR 364
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLV-EPDANHYSCMVDVFSRAGR 358
GV PN VTF G+++ + + EGL+I + V EP + + ++++
Sbjct: 365 FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN--SFITLYAKFEA 422
Query: 359 LDEAYKFIQRMPLEPTASAWGALL 382
L++A K + + S W A++
Sbjct: 423 LEDAKKAFEDITFREIIS-WNAMI 445
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 177/434 (40%), Gaps = 70/434 (16%)
Query: 52 PRQGLAIFHE---MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFV 108
P + L+IF E +G+ G + VT+ L AC DL G IHGF+ G V V
Sbjct: 56 PARALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCV 113
Query: 109 CSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
+A++ MY + A +F+ + D VSWN +L+ + N + L RM GV
Sbjct: 114 SNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGV 170
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
D T++ + C+ + L++ + K G LES
Sbjct: 171 VFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG-----------------LES------ 207
Query: 229 VHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGN- 287
DL + + MY++ +R VFD M KD+++WN+++ + G
Sbjct: 208 -----------DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTF 256
Query: 288 GKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN---SMGRDHLVEPDAN 344
G EA+++F +M+R GV+ + V+FT V++ C H + QI G + L+E
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG-- 314
Query: 345 HYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLG-----ACRVFKNVELAKIAAK 399
+ ++ +S+ G L+ +M E +W ++ A +F N+
Sbjct: 315 --NILMSRYSKCGVLEAVKSVFHQMS-ERNVVSWTTMISSNKDDAVSIFLNMR------- 364
Query: 400 KLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFV 459
FD N +V L N + + E +I L G P VGN T
Sbjct: 365 --FDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP-----SVGNSFITLY 417
Query: 460 VGDRSNTGSDKIYE 473
+ + K +E
Sbjct: 418 AKFEALEDAKKAFE 431
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 157/454 (34%), Positives = 230/454 (50%), Gaps = 45/454 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++++S L+H Y C + RVF+D+ +VV+W SL S +VN + F EM
Sbjct: 141 NMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQ 200
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE--------NVFVCSALVSM 115
NGVK N + +L AC KD+ +GK HGF G NV + ++L+ M
Sbjct: 201 SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDM 260
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
YA+C ++ AR +FD MP R VSWN
Sbjct: 261 YAKCGDLRTARYLFDGMPERTLVSWN---------------------------------- 286
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
++I G +NG EE+L M M +G P+++T S++ A I ++G+ +H Y +
Sbjct: 287 -SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSK 345
Query: 236 HR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
+ D + ALV MYAK D ++ F+ + KKD +AW +II A HG+G EAL +
Sbjct: 346 TGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSI 405
Query: 295 FENMLRSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
F+ M G P+ +T+ GVL CSH LV+EG + F M H +EP HY CMVD+
Sbjct: 406 FQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDIL 465
Query: 354 SRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYV 413
SRAGR +EA + ++ MP++P + WGALL C + +N+EL + + E G YV
Sbjct: 466 SRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYV 525
Query: 414 SLFNILVSAKLWSEASQIRILMKDRGITKTPGCS 447
L NI A W++ IR MK + + K G S
Sbjct: 526 LLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHS 559
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 173/373 (46%), Gaps = 56/373 (15%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
AR VF+ + V W S+ Y N P + L + EM G P+ T +L ACS
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
L+D+ G +HGF V+ G N++V + L+ MY C V VF+ +P + V+W +
Sbjct: 120 LRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSL 179
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
++ + N + + F M GVKA
Sbjct: 180 ISGFVNNNRFSDAIEAFREMQSNGVKA--------------------------------- 206
Query: 204 KPNEITISSILPACSILESLRMGKEVHCY--GL------RHRIG-DLSSTTALVYMYAKC 254
NE + +L AC + + GK H + GL + ++G ++ T+L+ MYAKC
Sbjct: 207 --NETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKC 264
Query: 255 SDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGV- 313
DL +R +FD MP++ +V+WN++I + +G+ +EAL +F +ML G+ P+ VTF V
Sbjct: 265 GDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVI 324
Query: 314 ----LSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ GCS G I + + V+ DA +V+++++ G + A K + +
Sbjct: 325 RASMIQGCSQL-----GQSIHAYVSKTGFVK-DAAIVCALVNMYAKTGDAESAKKAFEDL 378
Query: 370 PLEPTASAWGALL 382
+ T AW ++
Sbjct: 379 EKKDTI-AWTVVI 390
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 134/327 (40%), Gaps = 50/327 (15%)
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC---LSVK 123
+K + + S L C L +LN +HG ++ ++ NV S L+ C +++
Sbjct: 2 MKKHYKPILSQLENCRSLVELNQ---LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLS 58
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR+VF+ + WN ++ Y + +K L + M R+G
Sbjct: 59 YARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKG---------------- 102
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
+ P+ T +L ACS L ++ G VH + ++ ++
Sbjct: 103 -------------------YSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMY 143
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+T L++MY C ++N VF+ +P+ +VVAW ++I + +A+ F M +G
Sbjct: 144 VSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNG 203
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGL---QIFNSMGRDHLVEPDANH----YSCMVDVFSR 355
VK N +L C + + G +G D + + ++D++++
Sbjct: 204 VKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAK 263
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALL 382
G L A MP E T +W +++
Sbjct: 264 CGDLRTARYLFDGMP-ERTLVSWNSII 289
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 249/484 (51%), Gaps = 41/484 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCG-----LPRQG 55
M D+ + AL+ Y K ++ A ++F + ++VV++ ++ S ++ +
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 56 LAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSM 115
+F +M G++P+ T S +L ACS K L G+ IH ++ + F+ SAL+ +
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
YA S E G+ F+ S++ D A+W
Sbjct: 403 YALMGST-------------------------------EDGMQCFASTSKQ----DIASW 427
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
++I ++N Q E + ++ R++ +P E T+S ++ AC+ +L G+++ Y ++
Sbjct: 428 TSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIK 487
Query: 236 HRIGDLSST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
I +S T+ + MYAK ++ L+ VF + DV ++ MI + A HG+ EAL +
Sbjct: 488 SGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNI 547
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
FE+M G+KPN F GVL C H LV +GL+ F M D+ + P+ H++C+VD+
Sbjct: 548 FESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLG 607
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
R GRL +A I + W ALL +CRV+K+ + K A++L ++EP G+YV
Sbjct: 608 RTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVL 667
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEF 474
L NI + + S A ++R LM+DRG+ K P SW+ +GN+ H+F V D S+ S IY
Sbjct: 668 LHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTM 727
Query: 475 LDEL 478
L+ +
Sbjct: 728 LETM 731
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 179/374 (47%), Gaps = 40/374 (10%)
Query: 15 YGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTV 74
Y KC+ + AR++FD + R+++S+ SL S Y G Q + +F E +K + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
+ L C E DL+ G+ +HG V +G+ + VF+ + L+ MY++C + +A ++FD
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
RD VSWN +++ Y E+ L L ++M R+G+ +V+ C N
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE------ 265
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAK 253
GF + G +HCY + + D+ TAL+ MYAK
Sbjct: 266 -------GF-------------------IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAK 299
Query: 254 CSDLNLSRNVFDMMPKKDVVAWNTMI-----IANAMHGNGKEALLLFENMLRSGVKPNSV 308
L + +F +MP K+VV +N MI + EA LF +M R G++P+
Sbjct: 300 NGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPS 359
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQR 368
TF+ VL CS ++ ++ G QI + +++ + D S ++++++ G ++ +
Sbjct: 360 TFSVVLKACSAAKTLEYGRQIHALICKNNF-QSDEFIGSALIELYALMGSTEDGMQCFAS 418
Query: 369 MPLEPTASAWGALL 382
+ AS W +++
Sbjct: 419 TSKQDIAS-WTSMI 431
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 182/427 (42%), Gaps = 77/427 (18%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ VFL N LI Y KC ++ A +FD RD VSW SL S YV G + L +
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 61 EMGWNGVKPNAVTVSSILPACS-ELKD--LNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
+M +G+ + S+L AC L + + G AIH + + GM ++ V +AL+ MYA
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYA 298
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYF-----TNKEYEKGLALFSRMSREGVKADK 172
+ S+KEA +F LMP ++ V++N +++ + T++ + LF M R G++
Sbjct: 299 KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSP 358
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
+T+ S +L ACS ++L G+++H
Sbjct: 359 STF-----------------------------------SVVLKACSAAKTLEYGRQIHAL 383
Query: 233 GLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
++ D +AL+ +YA F K+D+ +W +MI + + + A
Sbjct: 384 ICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA 443
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI-----------FNS-------- 332
LF + S ++P T + ++S C+ + G QI F S
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISM 503
Query: 333 --------MGRDHLVE---PDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAW 378
+ +E PD YS M+ ++ G +EA + M ++P A+
Sbjct: 504 YAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
Query: 379 GALLGAC 385
+L AC
Sbjct: 564 LGVLIAC 570
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 155/355 (43%), Gaps = 45/355 (12%)
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
GK HG ++ + +++ + L++MY +C + AR +FD MP R+ +S+N +++ Y
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
YE+ + LF +K DK T+ +G C E ++
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERC--------------------DLD 165
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
+ +L ++ GL ++ ++ L+ MY+KC L+ + ++FD +
Sbjct: 166 LGELLHGLVVVN-----------GLSQQVFLIN---VLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS---HSRLVDEG 326
+D V+WN++I G +E L L M R G+ + VL C + +++G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 327 LQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACR 386
+ I + + E D + ++D++++ G L EA K MP + + + G +
Sbjct: 272 MAIHCYTAKLGM-EFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 387 VFKNVELAKIAAKKLF------DIEPNNPGNYVSLFNILVSAKLWSEASQIRILM 435
+ + + A A KLF +EP +P + + +AK QI L+
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEP-SPSTFSVVLKACSAAKTLEYGRQIHALI 384
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 285/574 (49%), Gaps = 54/574 (9%)
Query: 7 LSNALIHAYGKCKCIE-GARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+ NAL+ Y KC E A RVF +V +VVSWT+L V+ G + + EM
Sbjct: 362 VGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKR 421
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
V+PN VT+S +L ACS+L+ + IH + +R + + V ++LV YA V A
Sbjct: 422 EVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYA 481
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
V M RD +++ ++T + E
Sbjct: 482 WNVIRSMKRRDNITYTSLVTRF-----------------------------------NEL 506
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSST 244
G+ E +L ++ M G + +++++ + A + L +L GK +HCY ++ G S
Sbjct: 507 GKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL 566
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
+LV MY+KC L ++ VF+ + DVV+WN ++ A +G AL FE M +
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P+SVTF +LS CS+ RL D GL+ F M + + +EP HY +V + RAGRL+EA
Sbjct: 627 PDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATG 686
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
++ M L+P A + LL ACR N+ L + A K + P++P Y+ L ++ +
Sbjct: 687 VVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGK 746
Query: 425 WSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTG-SDKIYEFLDELGQKMK 483
A + R LM ++ ++K G S ++V +VH+FV D + ++ IY ++ + +++K
Sbjct: 747 PELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIK 806
Query: 484 LAG--YKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDC 541
G Y+ + E+ HS K AV +G + + ++ + V KN +C DC
Sbjct: 807 RFGSPYRGN--------------ENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Query: 542 HNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQ 575
H + ++ +V I VRD + H FKNG CSC+
Sbjct: 853 HEFVSILTRLVDKKITVRDGNQVHIFKNGECSCK 886
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 40/378 (10%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
L N L+ Y K I AR++FD++ R V +WT + S + L++F EM +G
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASG 119
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
PN T SS++ +C+ L+D++ G +HG ++ G N V S+L +Y++C KEA
Sbjct: 120 THPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEAC 179
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
+F + + D +SW ++++ +++ + L +S M + GV
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGV------------------ 221
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTT 245
PNE T +L A S L L GK +H + I ++ T
Sbjct: 222 -----------------PPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKT 263
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
+LV Y++ S + + V + ++DV W +++ + KEA+ F M G++P
Sbjct: 264 SLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQP 323
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD-EAYK 364
N+ T++ +LS CS R +D G QI + + E + + +VD++ + + EA +
Sbjct: 324 NNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGF-EDSTDVGNALVDMYMKCSASEVEASR 382
Query: 365 FIQRMPLEPTASAWGALL 382
M + P +W L+
Sbjct: 383 VFGAM-VSPNVVSWTTLI 399
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 195/423 (46%), Gaps = 46/423 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
+V L +L+ Y + +E A RV + +DV WTS+ S +V ++ + F EM
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC-LSV 122
G++PN T S+IL CS ++ L+ GK IH ++ G ++ V +ALV MY +C S
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
EA VF M + VS W +I G
Sbjct: 378 VEASRVFGAMVSPNVVS-----------------------------------WTTLILGL 402
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDL 241
+++G ++ +L +M K +PN +T+S +L ACS L +R E+H Y LR + G++
Sbjct: 403 VDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEM 462
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
+LV YA ++ + NV M ++D + + +++ G + AL + M
Sbjct: 463 VVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD 522
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
G++ + ++ G +S ++ ++ G + + A+ + +VD++S+ G L++
Sbjct: 523 GIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGF-SGAASVLNSLVDMYSKCGSLED 581
Query: 362 AYKFIQRMPLEPTASAWGALLG--ACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
A K + + P +W L+ A F + L+ ++ + EP++ F IL
Sbjct: 582 AKKVFEEIA-TPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSV-----TFLIL 635
Query: 420 VSA 422
+SA
Sbjct: 636 LSA 638
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 167/366 (45%), Gaps = 41/366 (11%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+ ++L Y KC + A +F L D +SWT + S V R+ L + EM G
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
V PN T +L A S L L GK IH + G+ NV + ++LV Y++ +++A
Sbjct: 221 VPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
V + +D W V++ + N ++ + F M G++ + T++A
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA--------- 330
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-T 245
IL CS + SL GK++H ++ D +
Sbjct: 331 --------------------------ILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 246 ALVYMYAKC--SDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
ALV MY KC S++ SR VF M +VV+W T+I+ HG ++ L M++ V
Sbjct: 365 ALVDMYMKCSASEVEASR-VFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+PN VT +GVL CS R V L+I + R H V+ + + +VD ++ + ++D A+
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH-VDGEMVVGNSLVDAYASSRKVDYAW 482
Query: 364 KFIQRM 369
I+ M
Sbjct: 483 NVIRSM 488
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 138/300 (46%), Gaps = 33/300 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ + N+L+ AY + ++ A V + RD +++TSL + + G L++ + M
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY 520
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G++ + +++ + A + L L +GK +H ++V+ G V ++LV MY++C S++
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLE 580
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A+ VF+ + D VSWNG+++ +N L+ F M + + D T+ ++ C
Sbjct: 581 DAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 184 ENGQTEESLEMLRKMQK---------------------------------MGFKPNEITI 210
T+ LE + M+K M KPN +
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIF 700
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
++L AC +L +G+++ GL D + L +Y + L++ ++M +K
Sbjct: 701 KTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEK 760
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 231/449 (51%), Gaps = 52/449 (11%)
Query: 38 SWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFA 97
+W LS Y + P + + ++ EM G+KPN +T +L AC+ L +G+ I
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 98 VRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGL 157
++HG +V+V + L+ +Y C +AR VFD M R+ VS
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS------------------ 181
Query: 158 ALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
WN+++ +ENG+ E +M F P+E T+ +L AC
Sbjct: 182 -----------------WNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSAC 224
Query: 218 SILESLRMGKEVHC------YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
+L +GK VH L R+G TALV MYAK L +R VF+ M K+
Sbjct: 225 G--GNLSLGKLVHSQVMVRELELNCRLG-----TALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLR-SGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
V W+ MI+ A +G +EAL LF M++ S V+PN VTF GVL CSH+ LVD+G + F
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYF 337
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKN 390
+ M + H ++P HY MVD+ RAGRL+EAY FI++MP EP A W LL AC + +
Sbjct: 338 HEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
Query: 391 VE---LAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCS 447
+ + + K+L ++EP GN V + N A++W+EA+++R +MK+ + K G S
Sbjct: 398 EDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
Query: 448 WLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
L++G H F G + IYE LD
Sbjct: 458 CLELGGSFHRFFSGYDPRSEYVSIYELLD 486
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 37/284 (13%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV++ N LIH YG CK AR+VFD++ R+VVSW S+ + V G F EM
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
P+ T+ +L AC +L+ GK +H + + N + +ALV MYA+ ++
Sbjct: 207 GKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLE 264
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE-GVKADKATWNAVIGGC 182
AR VF+ M ++ +W+ ++ E+ L LFS+M +E V+ + T+ V+ C
Sbjct: 265 YARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCAC 324
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
G ++ + +M+K I I P +H YG
Sbjct: 325 SHTGLVDDGYKYFHEMEK---------IHKIKPMM-----------IH-YG--------- 354
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMH 285
A+V + + LN + + MP + D V W T++ A ++H
Sbjct: 355 ---AMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 28/277 (10%)
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
K LA + + +TWN + G + ES+ + +M++ G KPN++T +L
Sbjct: 61 KDLAFARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLL 120
Query: 215 PACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV 273
AC+ L G+++ L+H D+ L+++Y C + +R VFD M +++VV
Sbjct: 121 KACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVV 180
Query: 274 AWNTMIIANAMHGNGKEALLL--FENMLRSGVKPNSVTFTGVLSGCS---------HSRL 322
+WN+ I A+ NGK L+ F M+ P+ T +LS C HS++
Sbjct: 181 SWNS--IMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQV 238
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+ L++ +G + +VD+++++G L+ A +RM ++ W A++
Sbjct: 239 MVRELELNCRLG------------TALVDMYAKSGGLEYARLVFERM-VDKNVWTWSAMI 285
Query: 383 GACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
+ E A K+ P NYV+ +L
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRP-NYVTFLGVL 321
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 235/424 (55%), Gaps = 15/424 (3%)
Query: 58 IFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
+F EM V+ N V +S++ KDL S + + +V + + ++S Y
Sbjct: 50 VFCEM----VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIV----LWNTMISGYI 101
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
++ EAR++FD MP RD +SWN VL Y + E +F M V +WN
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNV----FSWNG 157
Query: 178 VIGGCMENGQTEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCYG--L 234
+I G +NG+ E L ++M G PN+ T++ +L AC+ L + GK VH YG L
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 235 RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
+ D++ AL+ MY KC + ++ VF + ++D+++WNTMI A HG+G EAL L
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M SG+ P+ VTF GVL C H LV++GL FNSM D + P+ H C+VD+ S
Sbjct: 278 FHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLS 337
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
RAG L +A +FI +MP++ A W LLGA +V+K V++ ++A ++L +EP NP N+V
Sbjct: 338 RAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVM 397
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEF 474
L NI A + +A+++++ M+D G K G SW++ + + F + ++++
Sbjct: 398 LSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRI 457
Query: 475 LDEL 478
L EL
Sbjct: 458 LREL 461
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 122/285 (42%), Gaps = 36/285 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV N ++ Y +E RVFDD+ R+V SW L Y G + L F M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 64 WNG-VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLS 121
G V PN T++ +L AC++L + GK +H + G + +V V +AL+ MY +C +
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
++ A VF + RD +SWN ++ + + L LF M G+ DK T+ V+
Sbjct: 240 IEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCA 299
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL 241
C G E+ L M T SI+P HC
Sbjct: 300 CKHMGLVEDGLAYFNSM---------FTDFSIMPEIE-----------HC---------- 329
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMH 285
+V + ++ L + + MP K D V W T++ A+ ++
Sbjct: 330 ---GCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVY 371
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV + NALI YGKC IE A VF + RD++SW ++ + G + L +FHEM
Sbjct: 223 DVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMK 282
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKA-IHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+G+ P+ VT +L AC + + G A + ++ + C +V + +R +
Sbjct: 283 NSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFL 342
Query: 123 KEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKG 156
+A + MP + DAV W +L A K+ + G
Sbjct: 343 TQAVEFINKMPVKADAVIWATLLGASKVYKKVDIG 377
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 248/465 (53%), Gaps = 15/465 (3%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLP---RQGLAIFHEMGWNGV-KPNAVTVSSILP 79
AR +FD + + ++ + Y + LP + F M V +PN +L
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLK 134
Query: 80 ACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS-VKEARAVFDLMPHRDAV 138
+ L S +H + G V V +AL+ YA +S + AR +FD M R+ V
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 139 SWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKM 198
SW +L+ Y + + +ALF M D +WNA++ C +NG E++ + R+M
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPER----DVPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 199 -QKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSD 256
+ +PNE+T+ +L AC+ +L++ K +H + R + D+ + +LV +Y KC +
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR---SGVKPNSVTFTGV 313
L + +VF M KK + AWN+MI A+HG +EA+ +FE M++ + +KP+ +TF G+
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGL 370
Query: 314 LSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEP 373
L+ C+H LV +G F+ M +EP HY C++D+ RAGR DEA + + M ++
Sbjct: 371 LNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA 430
Query: 374 TASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRI 433
+ WG+LL AC++ +++LA++A K L + PNN G + N+ W EA + R
Sbjct: 431 DEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARK 490
Query: 434 LMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDEL 478
++K + K PG S +++ N VH F D+S+ +++IY LD L
Sbjct: 491 MIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 5 VFLSNALIHAYGK-CKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM- 62
V + AL+H+Y I AR++FD++ R+VVSWT++ S Y G +A+F +M
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 63 -----GWNGV--------------------------KPNAVTVSSILPACSELKDLNSGK 91
WN + +PN VTV +L AC++ L K
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNK 151
IH FA R + +VFV ++LV +Y +C +++EA +VF + + +WN ++ + +
Sbjct: 281 GIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHG 340
Query: 152 EYEKGLALFSRMSR---EGVKADKATWNAVIGGCMENG 186
E+ +A+F M + +K D T+ ++ C G
Sbjct: 341 RSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 87/197 (44%), Gaps = 46/197 (23%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++SDVF+SN+L+ YGKC +E A VF + + +W S+ +C+ G + +A+F
Sbjct: 291 LSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFE 350
Query: 61 EM---GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
EM N +KP+ +T +L AC+ HG +
Sbjct: 351 EMMKLNINDIKPDHITFIGLLNACT-----------------HGGL-------------- 379
Query: 118 RCLSVKEARAVFDLMPHRDAVS-----WNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
V + R FDLM +R + + ++ +++ L + S M +KAD+
Sbjct: 380 ----VSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK---MKADE 432
Query: 173 ATWNAVIGGCMENGQTE 189
A W +++ C +G +
Sbjct: 433 AIWGSLLNACKIHGHLD 449
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/485 (31%), Positives = 244/485 (50%), Gaps = 63/485 (12%)
Query: 27 VFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGV-KPNAVTVSSILPACSELK 85
VF+ + W L Y N L + ++I M G+ +P+ T ++ CS
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 86 DLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLT 145
+ G ++HG +R G ++V V ++ V Y +C + AR VF MP R+AVSW ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 146 AYFTNKEYEK---------------------GLA----------LFSRMSR--------- 165
AY + E E+ GL LF M +
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 166 ------------------EGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNE 207
E D W+A+I G +NGQ E+ ++ +M KP+E
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 208 ITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS---TTALVYMYAKCSDLNLSRNVF 264
+ ++ ACS + + ++V Y L R+ SS AL+ M AKC ++ + +F
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSY-LHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLF 363
Query: 265 DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVD 324
+ MP++D+V++ +M+ A+HG G EA+ LFE M+ G+ P+ V FT +L C SRLV+
Sbjct: 364 EEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVE 423
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
EGL+ F M + + + +HYSC+V++ SR G+L EAY+ I+ MP E ASAWG+LLG
Sbjct: 424 EGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGG 483
Query: 385 CRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTP 444
C + N E+A++ A+ LF++EP + G+YV L NI + W++ + +R M + GITK
Sbjct: 484 CSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKIC 543
Query: 445 GCSWL 449
G SW+
Sbjct: 544 GRSWI 548
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 1/198 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ ++I Y K + AR +F++ G DV +W++L Y G P + +F EM
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFA-VRHGMVENVFVCSALVSMYARCLSV 122
VKP+ + ++ ACS++ + + + R + +V AL+ M A+C +
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHM 356
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A +F+ MP RD VS+ ++ + + + LF +M EG+ D+ + ++ C
Sbjct: 357 DRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVC 416
Query: 183 MENGQTEESLEMLRKMQK 200
++ EE L M+K
Sbjct: 417 GQSRLVEEGLRYFELMRK 434
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 136/319 (42%), Gaps = 55/319 (17%)
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENV-FVCSALVSMYARCLSVKEARA 127
P+ +++ ++ C LN IH +R G+ ++ + + S + S+ + +
Sbjct: 8 PSLLSLETLFKLCKSEIHLNQ---IHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSS 64
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV-KADKATWNAVIGGCMENG 186
VF+ +P WN ++ Y + + +++ RM R G+ + D+ T+ V+ C NG
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSS 243
Q +R+G VH GL RIG D+
Sbjct: 125 Q-----------------------------------VRVGSSVH--GLVLRIGFDKDVVV 147
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
T+ V Y KC DL +R VF MP+++ V+W +++A G +EA +F+ M
Sbjct: 148 GTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLM----P 203
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+ N ++ ++ G S + ++F+ M + ++ Y+ M+D +++ G + A
Sbjct: 204 ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS-----YTSMIDGYAKGGDMVSAR 258
Query: 364 KFIQRMPLEPTASAWGALL 382
+ AW AL+
Sbjct: 259 DLFEE-ARGVDVRAWSALI 276
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 79/188 (42%), Gaps = 35/188 (18%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S ++ ALI KC ++ A ++F+++ RD+VS+ S+ G + + +F +M
Sbjct: 338 SSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM 397
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
G+ P+ V + IL C + + + G + ++ ++ + S +V++ +R
Sbjct: 398 VDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGK 457
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+KEA + MP +A + W +++GG
Sbjct: 458 LKEAYELIKSMP----------------------------------FEAHASAWGSLLGG 483
Query: 182 CMENGQTE 189
C +G TE
Sbjct: 484 CSLHGNTE 491
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/437 (33%), Positives = 236/437 (54%), Gaps = 40/437 (9%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPA 80
+E RR+F + V +W ++ S Y N + ++ F +M + +KP+ T+S IL +
Sbjct: 366 VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 81 CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSW 140
C+ L+ L GK IHG +R + +N + S L+++Y+ C ++ + +FD D ++
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFD-----DCIN- 479
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
+ D A WN++I G N ++L + R+M +
Sbjct: 480 ----------------------------ELDIACWNSMISGFRHNMLDTKALILFRRMHQ 511
Query: 201 MG-FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST---TALVYMYAKCSD 256
PNE + +++L +CS L SL G++ H GL + G +S + TAL MY KC +
Sbjct: 512 TAVLCPNETSFATVLSSCSRLCSLLHGRQFH--GLVVKSGYVSDSFVETALTDMYCKCGE 569
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
++ +R FD + +K+ V WN MI +G G EA+ L+ M+ SG KP+ +TF VL+
Sbjct: 570 IDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTA 629
Query: 317 CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTAS 376
CSHS LV+ GL+I +SM R H +EP+ +HY C+VD RAGRL++A K + P + ++
Sbjct: 630 CSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSV 689
Query: 377 AWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMK 436
W LL +CRV +V LA+ A+KL ++P + YV L N S + W +++ ++ LM
Sbjct: 690 LWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMN 749
Query: 437 DRGITKTPGCSWLQVGN 453
+ KTPG SW GN
Sbjct: 750 KNRVHKTPGQSWTTYGN 766
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 206/439 (46%), Gaps = 83/439 (18%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL-----------------VG---------- 33
M SD +L N L+ Y +C + AR+VFD++ VG
Sbjct: 37 MKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFD 96
Query: 34 ----RDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNS 89
RDVVSW ++ S V G + L ++ M +G P+ T++S+L ACS++ D
Sbjct: 97 GMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVF 156
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
G HG AV+ G+ +N+FV +AL+SMYA+C G + Y
Sbjct: 157 GMRCHGVAVKTGLDKNIFVGNALLSMYAKC----------------------GFIVDY-- 192
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
G+ +F +S + ++ ++ AVIGG + E+++M R M + G + + +
Sbjct: 193 ------GVRVFESLS----QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVC 242
Query: 210 ISSILP------ACSILESL---RMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNL 259
+S+IL C L + +GK++HC LR GDL +L+ +YAK D+N
Sbjct: 243 LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNG 302
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
+ +F MP+ +VV+WN MI+ +++ M SG +PN VT VL C
Sbjct: 303 AELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFR 362
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA---YKFIQRMPLEPTAS 376
S V+ G +IF+S + +P + ++ M+ +S +EA ++ +Q L+P +
Sbjct: 363 SGDVETGRRIFSS-----IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 377 AWGALLGACRVFKNVELAK 395
+L +C + +E K
Sbjct: 418 TLSVILSSCARLRFLEGGK 436
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 197/432 (45%), Gaps = 58/432 (13%)
Query: 1 MTSDVFLSNALIHAYGKCKCI-EGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+ ++F+ NAL+ Y KC I + RVF+ L + VS+T++ + + +F
Sbjct: 169 LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 60 HEMGWNGVKPNAVTVSSILP------ACSELKDLNS---GKAIHGFAVRHGMVENVFVCS 110
M GV+ ++V +S+IL C L ++ GK IH A+R G ++ + +
Sbjct: 229 RLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNN 288
Query: 111 ALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+L+ +YA+ + A +F MP + VSWN ++ + +K + +RM G +
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 171 DKATWNAVIGGCMENGQTE-------------------------------ESLEMLRKMQ 199
++ T +V+G C +G E E++ R+MQ
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 200 KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS-TTALVYMYAKCSDLN 258
KP++ T+S IL +C+ L L GK++H +R I S + L+ +Y++C +
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 259 LSRNVF-DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK-PNSVTFTGVLSG 316
+S +F D + + D+ WN+MI + +AL+LF M ++ V PN +F VLS
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 317 CS------HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
CS H R GL + + D VE + + D++ + G +D A +F +
Sbjct: 529 CSRLCSLLHGRQF-HGLVVKSGYVSDSFVE------TALTDMYCKCGEIDSARQFFDAV- 580
Query: 371 LEPTASAWGALL 382
L W ++
Sbjct: 581 LRKNTVIWNEMI 592
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 3/200 (1%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGR-DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGV 67
+ LI Y +C+ +E + +FDD + D+ W S+ S + + L + L +F M V
Sbjct: 455 SGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 68 K-PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
PN + +++L +CS L L G+ HG V+ G V + FV +AL MY +C + AR
Sbjct: 515 LCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSAR 574
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
FD + ++ V WN ++ Y N ++ + L+ +M G K D T+ +V+ C +G
Sbjct: 575 QFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSG 634
Query: 187 QTEESLEMLRKMQKM-GFKP 205
E LE+L MQ++ G +P
Sbjct: 635 LVETGLEILSSMQRIHGIEP 654
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 171/380 (45%), Gaps = 59/380 (15%)
Query: 89 SGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYF 148
SGK IHGF VR GM + ++C+ L+ +Y C AR VFD M RD SWN LT
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 149 TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
+ + +F M D +WN +I + G E++L + ++M GF P+
Sbjct: 84 KVGDLGEACEVFDGMPER----DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRF 139
Query: 209 TISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDL-NLSRNVF 264
T++S+L ACS + G + C+G+ + G ++ AL+ MYAKC + + VF
Sbjct: 140 TLASVLSACSKVLDGVFG--MRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVF 197
Query: 265 DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVD 324
+ + + + V++ +I A EA+ +F M GV+ +SV + +LS + D
Sbjct: 198 ESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 325 EGLQIF-NSMGR------------------DHLVE------------------PDAN--H 345
+I+ N +G+ + L+E P+ N
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 346 YSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGACRVFKNVELAKIAAKKLF 402
++ M+ F + R D++ +F+ RM +P ++LGAC +VE +++F
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE----TGRRIF 373
Query: 403 DIEPNNPGNYVSLFNILVSA 422
P VS +N ++S
Sbjct: 374 SSIPQPS---VSAWNAMLSG 390
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 6/149 (4%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
SD F+ AL Y KC I+ AR+ FD ++ ++ V W + Y + G + + ++ +
Sbjct: 551 VSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRK 610
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR-HGMVENV--FVCSALVSMYAR 118
M +G KP+ +T S+L ACS + +G I R HG+ + ++C +V R
Sbjct: 611 MISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYIC--IVDCLGR 668
Query: 119 CLSVKEARAVFDLMPHR-DAVSWNGVLTA 146
+++A + + P++ +V W +L++
Sbjct: 669 AGRLEDAEKLAEATPYKSSSVLWEILLSS 697
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/449 (32%), Positives = 247/449 (55%), Gaps = 46/449 (10%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG-W 64
F+S+ L + YG + ARRVFD++ DV+ WT++ S + L + L +F+ M
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRG 258
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+ P+ T ++L AC L+ L GK IHG + +G+ NV V S+L+ MY +C SV+E
Sbjct: 259 KGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVRE 318
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
AR VF+ M +++VSW+ A++GG +
Sbjct: 319 ARQVFNGMSKKNSVSWS-----------------------------------ALLGGYCQ 343
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC-YGLRHRIGDLSS 243
NG+ E+++E+ R+M++ + ++L AC+ L ++R+GKE+H Y R G++
Sbjct: 344 NGEHEKAIEIFREMEE----KDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIV 399
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+AL+ +Y K ++ + V+ M ++++ WN M+ A A +G G+EA+ F +M++ G+
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGI 459
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KP+ ++F +L+ C H+ +VDEG F M + + ++P HYSCM+D+ RAG +EA
Sbjct: 460 KPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAE 519
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIA---AKKLFDIEPNNPGNYVSLFNILV 420
++R AS WG LLG C N + +++A AK++ ++EP +YV L N+
Sbjct: 520 NLLERAECRNDASLWGVLLGPCAA--NADASRVAERIAKRMMELEPKYHMSYVLLSNMYK 577
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWL 449
+ +A IR LM RG+ KT G SW+
Sbjct: 578 AIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/392 (28%), Positives = 184/392 (46%), Gaps = 54/392 (13%)
Query: 1 MTSDVFLSNALIHAYGKC-KCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+ +D + N+L+ Y K + RRVFD +D +SWTS+ S YV + L +F
Sbjct: 92 LETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVF 151
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G+ N T+SS + ACSEL ++ G+ HG + HG N F+ S L +Y
Sbjct: 152 VEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVN 211
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR-EGVKADKATWNAV 178
+AR VFD MP D + W VL+A+ N YE+ L LF M R +G+ D +T+
Sbjct: 212 REPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFG-- 269
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
++L AC L L+ GKE+H + + I
Sbjct: 270 ---------------------------------TVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 239 G-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
G ++ ++L+ MY KC + +R VF+ M KK+ V+W+ ++ +G ++A+ +F
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR-----DHLVEPDANHYSCMVDV 352
M + + F VL C+ V G +I R + +VE S ++D+
Sbjct: 357 M----EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE------SALIDL 406
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ ++G +D A + +M + + W A+L A
Sbjct: 407 YGKSGCIDSASRVYSKMSIRNMIT-WNAMLSA 437
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 151/320 (47%), Gaps = 54/320 (16%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC-LSVKEARAVFDLMP 133
+S+L C+++ G H V+ G+ + V ++L+S+Y + ++E R VFD
Sbjct: 65 ASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRF 124
Query: 134 HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLE 193
+DA+SW +++ Y T KE+ K L +F M G+ A++ T
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFT------------------- 165
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI---GDLSSTTALVYM 250
+SS + ACS L +R+G+ H + H +SST L Y+
Sbjct: 166 ----------------LSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISST--LAYL 207
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS-GVKPNSVT 309
Y + +R VFD MP+ DV+ W ++ A + + +EAL LF M R G+ P+ T
Sbjct: 208 YGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGST 267
Query: 310 FTGVLSGCSHSRLVDEGLQIF-----NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
F VL+ C + R + +G +I N +G + +VE S ++D++ + G + EA +
Sbjct: 268 FGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE------SSLLDMYGKCGSVREARQ 321
Query: 365 FIQRMPLEPTASAWGALLGA 384
M + + S W ALLG
Sbjct: 322 VFNGMSKKNSVS-WSALLGG 340
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/403 (35%), Positives = 219/403 (54%), Gaps = 38/403 (9%)
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+G +A +SS + +C +D +G H A++ G + +V++ S+LV +Y V+
Sbjct: 114 DGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVEN 173
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A VF+ MP R+ VS W A+I G +
Sbjct: 174 AYKVFEEMPERNVVS-----------------------------------WTAMISGFAQ 198
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD-LSS 243
+ + L++ KM+K PN+ T +++L AC+ +L G+ VHC L + L
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RSG 302
+ +L+ MY KC DL + +FD KDVV+WN+MI A HG +A+ LFE M+ +SG
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
KP+++T+ GVLS C H+ LV EG + FN M +H ++P+ NHYSC+VD+ R G L EA
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEA 377
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ I+ MP++P + WG+LL +CRV +V AA++ +EP+ +V L N+ S
Sbjct: 378 LELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASV 437
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSN 465
W EA+ +R LMKD+G+ PGCSW+++ N V F D SN
Sbjct: 438 GYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSN 480
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 1/204 (0%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDV+L ++L+ Y +E A +VF+++ R+VVSWT++ S + L ++ +M
Sbjct: 153 SDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKM 212
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ PN T +++L AC+ L G+++H + G+ + + ++L+SMY +C +
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFS-RMSREGVKADKATWNAVIGG 181
K+A +FD ++D VSWN ++ Y + + + LF M + G K D T+ V+
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 182 CMENGQTEESLEMLRKMQKMGFKP 205
C G +E + M + G KP
Sbjct: 333 CRHAGLVKEGRKFFNLMAEHGLKP 356
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 105/224 (46%), Gaps = 13/224 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S + +SN+LI Y KC ++ A R+FD +DVVSW S+ + Y GL Q + +F
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 61 -EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M +G KP+A+T +L +C + G+ HG+ + S LV + R
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 120 LSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
++EA + + MP + ++V W +L + + + G+ + R ++ D A +
Sbjct: 372 GLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR--AAEERLMLEPDCAATHVQ 429
Query: 179 IGGCMEN-GQTEESLEMLRKMQKMGFKPNEITISSILPACSILE 221
+ + G +E+ + + M+ G K N P CS +E
Sbjct: 430 LANLYASVGYWKEAATVRKLMKDKGLKTN--------PGCSWIE 465
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 113/251 (45%), Gaps = 15/251 (5%)
Query: 198 MQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSD 256
+++ G+ + +SS + +C + R G HC L+ I D+ ++LV +Y +
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
+ + VF+ MP+++VV+W MI A L L+ M +S PN TFT +LS
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSA 230
Query: 317 CSHSRLVDEGLQIFNSMGRDHLVEPDANHYS-CMVDVFSRAGRLDEAYKFIQRMPLEPTA 375
C+ S + +G + H+ H S ++ ++ + G L +A++ + +
Sbjct: 231 CTGSGALGQGRSVHCQT--LHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 376 SAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPG------NYVSLFNILVSAKLWSEAS 429
S W +++ + LA + A +LF++ G Y+ + + A L E
Sbjct: 289 S-WNSMIAG---YAQHGLA-MQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR 343
Query: 430 QIRILMKDRGI 440
+ LM + G+
Sbjct: 344 KFFNLMAEHGL 354
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 242/451 (53%), Gaps = 42/451 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+++ N+L+H YG C A +VF ++ RDVVSWT + + + GL ++ L F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
V+PN T +L + + L+ GK IHG ++ + ++ +AL+ MY +C +
Sbjct: 200 ---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLS 256
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+A VF E K DK +WN++I G +
Sbjct: 257 DAMRVFG-----------------------------------ELEKKDKVSWNSMISGLV 281
Query: 184 ENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
+++E++++ MQ G KP+ ++S+L AC+ L ++ G+ VH Y L I D
Sbjct: 282 HCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDT 341
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS 301
TA+V MYAKC + + +F+ + K+V WN ++ A+HG+G E+L FE M++
Sbjct: 342 HIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKL 401
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM-GRDHLVEPDANHYSCMVDVFSRAGRLD 360
G KPN VTF L+ C H+ LVDEG + F+ M R++ + P HY CM+D+ RAG LD
Sbjct: 402 GFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLD 461
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNV-ELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EA + ++ MP++P GA+L AC+ + EL K DIE + G YV L NI
Sbjct: 462 EALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIF 521
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
+ + W + ++IR LMK +GI+K PG S+++
Sbjct: 522 AANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 153/352 (43%), Gaps = 42/352 (11%)
Query: 38 SWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFA 97
S+ +L S Y C PR + + NG P+ T + AC + + GK IHG
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 98 VRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGL 157
+ G ++++V ++LV Y C + A VF MP RD VSW G++T + Y++ L
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 158 ALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
FS+M E PN T +L +
Sbjct: 193 DTFSKMDVE--------------------------------------PNLATYVCVLVSS 214
Query: 218 SILESLRMGKEVHCYGL-RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWN 276
+ L +GK +H L R + L + AL+ MY KC L+ + VF + KKD V+WN
Sbjct: 215 GRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWN 274
Query: 277 TMIIANAMHGNGKEALLLFENM-LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
+MI KEA+ LF M SG+KP+ T VLS C+ VD G + +
Sbjct: 275 SMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT 334
Query: 336 DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRV 387
++ D + + +VD++++ G ++ A + + W ALLG +
Sbjct: 335 AG-IKWDTHIGTAIVDMYAKCGYIETALEIFNGIR-SKNVFTWNALLGGLAI 384
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 160/549 (29%), Positives = 278/549 (50%), Gaps = 74/549 (13%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+ N+++ Y + AR++FD++ RDV+SW+ + YV P GL +F EM
Sbjct: 162 VQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA 220
Query: 67 -VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLSVKE 124
+P+ VTV+S+L AC+ ++D++ G+++HGF++R G + +VFVC++L+ MY++ V
Sbjct: 221 KTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDS 280
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A VFD R+ VSWN +L + N+ Y++ L +F M +E V+ D+ T +++ C
Sbjct: 281 AFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKF 340
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPA---CS-------ILESLRMGKEVHC--- 231
Q + + + G++ NE+ +SS++ A CS +L+S+ V C
Sbjct: 341 FEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTM 400
Query: 232 -YGLRH------------RIGDLSSTTALVYMYAKCS----------------------- 255
GL H + D + ++ + CS
Sbjct: 401 ISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAIN 460
Query: 256 ----------------DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ ++R FD + +K++++W +I A A++G +AL LF+ M
Sbjct: 461 DISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMK 520
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM-GRDHLVEPDANHYSCMVDVFSRAGR 358
+ G PN+VT+ LS C+H LV +GL IF SM DH +P HYSC+VD+ SRAG
Sbjct: 521 QKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH--KPSLQHYSCIVDMLSRAGE 578
Query: 359 LDEAYKFIQRMP--LEPTASAWGALLGACR-VFKNVELAKIAAKKLFDIEPNNPGNYVSL 415
+D A + I+ +P ++ ASAWGA+L CR FK + + ++ ++EP Y+
Sbjct: 579 IDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLA 638
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL 475
+ + K W + + +R L+K+R + G S ++ GN F+ GD+ + ++ + +
Sbjct: 639 SSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVV 698
Query: 476 DELGQKMKL 484
L + MKL
Sbjct: 699 QSLHRCMKL 707
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 140/542 (25%), Positives = 232/542 (42%), Gaps = 98/542 (18%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+F N++ Y KC + R FD + RD VSW + ++ G +GL F ++
Sbjct: 61 LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV 120
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G +PN T+ ++ AC L G+ IHG+ +R G V ++++ MYA S+
Sbjct: 121 WGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS- 177
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
AR +FD M RD +SW+ V+ +Y +KE GL LF M E
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHE------------------ 219
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH--RIGDLS 242
+TE P+ +T++S+L AC+++E + +G+ VH + +R + D+
Sbjct: 220 -AKTE---------------PDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVF 263
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L+ MY+K D++ + VFD +++V+WN+++ + EAL +F M++
Sbjct: 264 VCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEA 323
Query: 303 VKPNSVTFTGVLSGCS-----------HSRLVDEGLQ-----------------IFNSMG 334
V+ + VT +L C H ++ G + + + G
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 335 R--DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVE 392
D + D S M+ + AGR DEA M P A +LL AC V ++
Sbjct: 384 TVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLR 443
Query: 393 LAK----IAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSW 448
+K IA ++ I N +S+ +V A A ++ D+ IT+ SW
Sbjct: 444 TSKWAHGIAIRRSLAI------NDISVGTSIVDAYAKCGAIEMARRTFDQ-ITEKNIISW 496
Query: 449 LQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLC 508
+ + + + N DK DE+ QK GY P+ L A S C
Sbjct: 497 TVI---ISAYAI----NGLPDKALALFDEMKQK----GYTPNAVTYLA-------ALSAC 538
Query: 509 NH 510
NH
Sbjct: 539 NH 540
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/520 (29%), Positives = 246/520 (47%), Gaps = 72/520 (13%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+ D F N +I Y K + I A +F+ + R+ VSW+++ + + G + +F +
Sbjct: 133 SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRK 192
Query: 62 MGWNGVKPNAVTVSSILP---------ACSELKDLNSGKAI------------------- 93
M P V+ ++ + L SG+
Sbjct: 193 MPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVE 252
Query: 94 ----------------HGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDA 137
HG R +NV ++++ Y + V AR +FD M RD
Sbjct: 253 AARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT 312
Query: 138 VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA--------------------------- 170
+SWN ++ Y E ALFS M +
Sbjct: 313 ISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEK 372
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
+WN++I +N +E++++ +M G KP+ T++S+L A + L +LR+G ++H
Sbjct: 373 HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMH 432
Query: 231 CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGK 289
++ I D+ AL+ MY++C ++ SR +FD M K++V+ WN MI A HGN
Sbjct: 433 QIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Query: 290 EALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
EAL LF +M +G+ P+ +TF VL+ C+H+ LVDE F SM + +EP HYS +
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSL 552
Query: 350 VDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNP 409
V+V S G+ +EA I MP EP + WGALL ACR++ NV LA +AA+ + +EP +
Sbjct: 553 VNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESS 612
Query: 410 GNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWL 449
YV L+N+ LW EASQ+R+ M+ + I K G SW+
Sbjct: 613 TPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 187/445 (42%), Gaps = 107/445 (24%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPR---QGLAIFHEMGWN 65
N +I Y K + + AR++FD + RDVV+W ++ S YV+CG R + +F EM
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM--- 131
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
P+ + F + ++S YA+ + EA
Sbjct: 132 -------------PS-----------------------RDSFSWNTMISGYAKNRRIGEA 155
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+F+ MP R+AVSW+ ++T + N E + + LF +M VK D + A++ G ++N
Sbjct: 156 LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP---VK-DSSPLCALVAGLIKN 211
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT 245
+ E+ +L + SL G+E Y
Sbjct: 212 ERLSEAAWVLGQYG----------------------SLVSGREDLVYAY----------N 239
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPK---------------KDVVAWNTMIIANAMHGNGKE 290
L+ Y + + +R +FD +P K+VV+WN+MI A G+
Sbjct: 240 TLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVS 299
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
A LLF+ M +++++ ++ G H +++ +F+ M DA+ ++ MV
Sbjct: 300 ARLLFDQM----KDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR-----DAHSWNMMV 350
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNV-ELAKIAAKKLFDIEPNNP 409
++ G ++ A + ++ P + T S W +++ A K+ E + + + E +P
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVS-WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDP 409
Query: 410 GNYVSLFNI---LVSAKLWSEASQI 431
SL + LV+ +L + QI
Sbjct: 410 HTLTSLLSASTGLVNLRLGMQMHQI 434
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 14/131 (10%)
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG--- 316
+R++F+ + ++ V WNTMI +A LF+ M + V VT+ ++SG
Sbjct: 59 ARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDV----VTWNTMISGYVS 114
Query: 317 CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTAS 376
C R ++E ++F D + D+ ++ M+ +++ R+ EA ++MP E A
Sbjct: 115 CGGIRFLEEARKLF-----DEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP-ERNAV 168
Query: 377 AWGALL-GACR 386
+W A++ G C+
Sbjct: 169 SWSAMITGFCQ 179
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 147/454 (32%), Positives = 252/454 (55%), Gaps = 19/454 (4%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SDV + ++LI YGKC C+ AR+VFD++ R+V +W ++ Y++ G +F E+
Sbjct: 79 SDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI 138
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
V N VT ++ K + KA F ++NV S ++ +Y +
Sbjct: 139 S---VCRNTVTWIEMIKGYG--KRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKM 193
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
++AR F+ +P ++A W+ +++ YF + + A+F R+ D WN +I G
Sbjct: 194 EDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRV----FARDLVIWNTLIAGY 249
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
+NG ++++++ MQ G++P+ +T+SSIL AC+ L +G+EVH + HR +L+
Sbjct: 250 AQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSL-INHRGIELN 308
Query: 243 S--TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ AL+ MYAKC DL + +VF+ + + V N+MI A+HG GKEAL +F M
Sbjct: 309 QFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMES 368
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+KP+ +TF VL+ C H + EGL+IF+ M + V+P+ H+ C++ + R+G+L
Sbjct: 369 LDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLK 427
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNY-----VSL 415
EAY+ ++ M ++P + GALLGAC+V + E+A+ K+ + + +Y S+
Sbjct: 428 EAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAE-QVMKIIETAGSITNSYSENHLASI 486
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWL 449
N+ + W A +R+ M+ RG+ K+PG S L
Sbjct: 487 SNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 171/343 (49%), Gaps = 23/343 (6%)
Query: 40 TSLSSCYVNCGLPRQGLAIFHEMGWNGVK-PNAVTVSSILPACS-ELKDLNSGKAIHGFA 97
++L +++ G P Q L ++ + GV P V + IL AC+ + + GK +H +
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPL--ILRACACVVPRVVLGKLLHSES 72
Query: 98 VRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGL 157
++ G+ +V V S+L+SMY +C V AR VFD MP R+ +WN ++ Y +N +
Sbjct: 73 IKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLAS 132
Query: 158 ALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
LF +S V + TW +I G + + E++ E+ ++M F+ + S++
Sbjct: 133 GLFEEIS---VCRNTVTWIEMIKGYGKRIEIEKARELF---ERMPFELKNVKAWSVMLGV 186
Query: 218 SILESLRMGKEVHCYGLRHRIGDLSSTTALVYM-----YAKCSDLNLSRNVFDMMPKKDV 272
+ + +M R D+ A V+ Y + D++ +R +F + +D+
Sbjct: 187 YV-NNRKMEDA------RKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDL 239
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNS 332
V WNT+I A +G +A+ F NM G +P++VT + +LS C+ S +D G ++ +S
Sbjct: 240 VIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV-HS 298
Query: 333 MGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTA 375
+ +E + + ++D++++ G L+ A + + + A
Sbjct: 299 LINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/450 (34%), Positives = 242/450 (53%), Gaps = 18/450 (4%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V++ L+ Y + IE A++ FDD+ ++ VSW SL Y+ G + +F ++
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI-- 196
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
P VS L S K + G A F+ +++ + L+ Y C +K
Sbjct: 197 ----PEKDAVSWNLIISSYAKKGDMGNACSLFSAMP--LKSPASWNILIGGYVNCREMKL 250
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
AR FD MP ++ VSW +++ Y + + LF MS K DK ++A+I +
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMS----KKDKLVYDAMIACYTQ 306
Query: 185 NGQTEESLEMLRKMQKMG--FKPNEITISSILPACSILESLRMGKEVHCYGLRH--RIGD 240
NG+ +++L++ +M + +P+EIT+SS++ A S L + G V Y H +I D
Sbjct: 307 NGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDD 366
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
L ST+ L+ +Y K D + +F + KKD V+++ MI+ ++G EA LF M+
Sbjct: 367 LLSTS-LIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIE 425
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+ PN VTFTG+LS SHS LV EG + FNSM +DH +EP A+HY MVD+ RAGRL+
Sbjct: 426 KKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLE 484
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EAY+ I+ MP++P A WGALL A + NVE +IA +E + G L I
Sbjct: 485 EAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYS 544
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
S W +A +R +K++ + KT GCSW++
Sbjct: 545 SVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 21/399 (5%)
Query: 25 RRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSEL 84
+R+ G D SW L ++ + ++ +M +G+ P++ V+S+L AC ++
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 85 KDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVL 144
+++ GK IH A+++G+ V+V + LV +Y+R ++ A+ FD + ++ VSWN +L
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 145 TAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFK 204
Y + E ++ +F ++ + D +WN +I + G + + M
Sbjct: 178 HGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 205 PNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVF 264
I I + + R K Y + S ++ Y K D+ + +F
Sbjct: 234 SWNILIGGYV-------NCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 265 DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR--SGVKPNSVTFTGVLSGCSHSRL 322
+M KKD + ++ MI +G K+AL LF ML S ++P+ +T + V+S S
Sbjct: 287 RLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGN 346
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
G + S +H ++ D + ++D++ + G +A+K + + T S + A++
Sbjct: 347 TSFGTWV-ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVS-YSAMI 404
Query: 383 GACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFNIL 419
C + A LF IE P N V+ +L
Sbjct: 405 MGC----GINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 57/309 (18%)
Query: 110 SALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVL---TAYFTNKEYEKGLALFSRMSRE 166
S L RC+ +++A+ V + +L T +FT KE+ + + + + +
Sbjct: 4 SKLRFFLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFT-KEFSRNIVTYVKRILK 62
Query: 167 GVKA-DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRM 225
G D +W ++ ++ + +E++++ M G P+ ++S+L AC +E++
Sbjct: 63 GFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVD 122
Query: 226 GKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAM 284
GK +H L++ + G + T LV +Y++ + L++ FD + +K+ V+WN++ +
Sbjct: 123 GKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSL-----L 177
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDAN 344
HG L SG +DE ++F D + E DA
Sbjct: 178 HG-----------YLESGE-------------------LDEARRVF-----DKIPEKDAV 202
Query: 345 HYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA---CRVFKNVELAKIAAKKL 401
++ ++ +++ G + A MPL+ AS W L+G CR K A+
Sbjct: 203 SWNLIISSYAKKGDMGNACSLFSAMPLKSPAS-WNILIGGYVNCREMK-------LARTY 254
Query: 402 FDIEPNNPG 410
FD P G
Sbjct: 255 FDAMPQKNG 263
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 248/449 (55%), Gaps = 6/449 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM- 62
+V++ +L+ Y +C A R+F+ + + VV++ + S + G+ ++F+ M
Sbjct: 163 EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMR 222
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
++ +PN VT + + AC+ L +L G+ +HG ++ V +AL+ MY++C
Sbjct: 223 KFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCW 282
Query: 123 KEARAVF-DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
K A VF +L R+ +SWN V++ N ++E + LF ++ EG+K D ATWN++I G
Sbjct: 283 KSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISG 342
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-D 240
+ G+ E+ + +M + P+ ++S+L ACS + +L+ GKE+H + ++ D
Sbjct: 343 FSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERD 402
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMM-PK-KDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ T+L+ MY KC + +R +FD PK KD V WN MI HG + A+ +FE +
Sbjct: 403 IFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELL 462
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
V+P+ TFT VLS CSH V++G QIF M ++ +P H CM+D+ R+GR
Sbjct: 463 REEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGR 522
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
L EA + I +M ++ +LLG+CR + L + AA KL ++EP NP +V L +I
Sbjct: 523 LREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKLAELEPENPAPFVILSSI 581
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCS 447
+ + W + IR ++ + + K PG S
Sbjct: 582 YAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 176/388 (45%), Gaps = 80/388 (20%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DVF + AL+ Y K K + A +V D++ R + S + S + G R +F +
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G N+VTV+S+L C D+ G +H A++ G V+V ++LVSMY+RC
Sbjct: 125 VSGSGMNSVTVASVLGGCG---DIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWV 181
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +F+ +PH+ V T+NA I G M
Sbjct: 182 LAARMFEKVPHKSVV-----------------------------------TYNAFISGLM 206
Query: 184 ENGQTEESLEMLRKMQKMGF-KPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DL 241
ENG + M+K +PN++T + + AC+ L +L+ G+++H ++ +
Sbjct: 207 ENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 242 SSTTALVYMYAKCSDLNLSRNVF-DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
TAL+ MY+KC + VF ++ +++++WN++I ++G + A+ LFE +
Sbjct: 267 MVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDS 326
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G+KP+S T+ ++SG FS+ G++
Sbjct: 327 EGLKPDSATWNSLISG------------------------------------FSQLGKVI 350
Query: 361 EAYKFIQRM---PLEPTASAWGALLGAC 385
EA+KF +RM + P+ +LL AC
Sbjct: 351 EAFKFFERMLSVVMVPSLKCLTSLLSAC 378
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 159/359 (44%), Gaps = 50/359 (13%)
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
PN T +L +C++L D+ G+ +H V+ G +VF +ALVSMY + V +A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
D MP R A+ NA + G +ENG
Sbjct: 89 LDEMPERGI-----------------------------------ASVNAAVSGLLENGFC 113
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTAL 247
++ M + G N +T++S+L C +E G ++HC ++ ++ T+L
Sbjct: 114 RDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GMQLHCLAMKSGFEMEVYVGTSL 170
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALL--LFENMLR--SGV 303
V MY++C + L+ +F+ +P K VV +N I + + NG L+ +F N++R S
Sbjct: 171 VSMYSRCGEWVLAARMFEKVPHKSVVTYNAFI--SGLMENGVMNLVPSVF-NLMRKFSSE 227
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+PN VTF ++ C+ + G Q+ + + + + + ++D++S+ AY
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEF-QFETMVGTALIDMYSKCRCWKSAY 286
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ +W +++ + E A +KL D E P + + +N L+S
Sbjct: 287 IVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKL-DSEGLKPDS--ATWNSLISG 342
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 244/487 (50%), Gaps = 46/487 (9%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+D+++S ++ Y K + AR FD++ R VSWT+L S Y+ CG +F +M
Sbjct: 111 ADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM 170
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
P+ V++V + +A++ + + +
Sbjct: 171 ------PH--------------------------------VKDVVIYNAMMDGFVKSGDM 192
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
AR +FD M H+ ++W ++ Y K+ + LF M + +WN +IGG
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNL----VSWNTMIGGY 248
Query: 183 MENGQTEESLEMLRKMQ-KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD- 240
+N Q +E + + ++MQ P+++TI S+LPA S +L +G+ HC+ R ++
Sbjct: 249 CQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ TA++ MY+KC ++ ++ +FD MP+K V +WN MI A++GN + AL LF M+
Sbjct: 309 VKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMI 368
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
KP+ +T V++ C+H LV+EG + F+ M R+ + HY CMVD+ RAG L
Sbjct: 369 EE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLK 426
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA I MP EP + L AC +K++E A+ KK ++EP N GNYV L N+
Sbjct: 427 EAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYA 486
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
+ K W + ++ +M+ K GCS +++ V F+ GD ++ I+ L +L
Sbjct: 487 ADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLM 546
Query: 481 KMKLAGY 487
M Y
Sbjct: 547 HMNEEKY 553
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 130/276 (47%), Gaps = 17/276 (6%)
Query: 98 VRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKG 156
+RH + NV + + + + A + + AR +FD P R D+ N ++ AY ++Y
Sbjct: 2 LRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDS 61
Query: 157 LALFSRMSREGVKA-DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
AL+ + +E A D T+ + C + + L++ ++ + GF + + ++
Sbjct: 62 FALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVD 121
Query: 216 ACSILESLRMGKEVHCYG-LRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK-KDVV 273
+ +MG + + + HR S TAL+ Y +C +L+L+ +FD MP KDVV
Sbjct: 122 MYAKFG--KMGCARNAFDEMPHR--SEVSWTALISGYIRCGELDLASKLFDQMPHVKDVV 177
Query: 274 AWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
+N M+ G+ A LF+ M V +T+T ++ G + + +D ++F++M
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTV----ITWTTMIHGYCNIKDIDAARKLFDAM 233
Query: 334 GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+LV ++ M+ + + + E + Q M
Sbjct: 234 PERNLVS-----WNTMIGGYCQNKQPQEGIRLFQEM 264
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 161/507 (31%), Positives = 257/507 (50%), Gaps = 52/507 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM- 62
+V ++++ Y + + A R+F ++ R++VSWT++ S + L R+ L +F EM
Sbjct: 230 NVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 63 -GWNGVKPNAVTVSSILPACS----ELKDLNSGKAIHGFAVRHG---MVENVFVCSALVS 114
+ V PN T+ S+ AC E + L G+ +H + +G + + + +LV
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRL--GEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 115 MYARCLSVKEARAV----FDLMP--------------------------HRDAVSWNGVL 144
MYA + A+++ FDL D VSW ++
Sbjct: 348 MYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMI 407
Query: 145 TAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFK 204
Y + + LF ++ + D TW +I G ++N E+ +L M + G K
Sbjct: 408 DGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 205 PNEITISSILPACSILESLRMGKEVHCYGLRHRI---GDLSSTTALVYMYAKCSDLNLSR 261
P T S +L + +L GK +HC + DL +LV MYAKC + +
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSR 321
+F M +KD V+WN+MI+ + HG +AL LF+ ML SG KPNSVTF GVLS CSHS
Sbjct: 524 EIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSG 583
Query: 322 LVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
L+ GL++F +M + ++P +HY M+D+ RAG+L EA +FI +P P + +GAL
Sbjct: 584 LITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGAL 643
Query: 382 LGACRVF---KNVE-LAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKD 437
LG C + K+ E +A+ AA +L +++P N +V+L N+ ++R M
Sbjct: 644 LGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGI 703
Query: 438 RGITKTPGCSWLQVGNRVHTFVVGDRS 464
+G+ KTPGCSW+ V R + F+ GD+S
Sbjct: 704 KGVKKTPGCSWVVVNGRANVFLSGDKS 730
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/472 (23%), Positives = 189/472 (40%), Gaps = 109/472 (23%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
+L+ Y K ++ AR +F+ + R++V+ ++ + YV C + +F EM
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM-----P 135
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSVKEARA 127
N V+ + +L A + D S A+ F M E NV + LV+ R +++A+
Sbjct: 136 KNVVSWTVMLTALCD--DGRSEDAVELF---DEMPERNVVSWNTLVTGLIRNGDMEKAKQ 190
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV------------------- 168
VFD MP RD VSWN ++ Y N E+ LF MS + V
Sbjct: 191 VFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREA 250
Query: 169 --------KADKATWNAVIGGCMENGQTEESLEMLRKMQK--MGFKPNEITISSILPACS 218
+ + +W A+I G N E+L + +M+K PN T+ S+ AC
Sbjct: 251 YRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACG 310
Query: 219 IL--ESLRMGKE-----------------------VHCYG----------LRHRIGDLSS 243
L E R+G++ VH Y L + DL S
Sbjct: 311 GLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQS 370
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPK--------------------------------KD 271
++ Y K DL + +F+ + KD
Sbjct: 371 CNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD 430
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
V W MI + EA L +M+R G+KP + T++ +LS + +D+G I
Sbjct: 431 GVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHC 490
Query: 332 SMGRDHL-VEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
+ + +PD + +V ++++ G +++AY+ +M + T S W +++
Sbjct: 491 VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVS-WNSMI 541
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 178/447 (39%), Gaps = 93/447 (20%)
Query: 24 ARRVFDDLVGRD----VVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILP 79
AR + D + R VV WTSL S Y G + +F M + N VT +++L
Sbjct: 61 ARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMP----ERNIVTCNAMLT 116
Query: 80 ACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVS 139
+ + +N + + M +NV + +++ ++A +FD MP R+ VS
Sbjct: 117 GYVKCRRMN-----EAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVS 171
Query: 140 WNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ 199
WN ++T N + EK +F M D +WNA+I G +EN EE+ + M
Sbjct: 172 WNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 200 KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNL 259
+ ++ + T++VY Y + D+
Sbjct: 228 E--------------------------------------KNVVTWTSMVYGYCRYGDVRE 249
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR--SGVKPNSVTFTGVLSGC 317
+ +F MP++++V+W MI A + +EAL+LF M + V PN T + C
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 318 S-------------HSRLVDEGLQIFNSMGR------------------DHLVEPDANHY 346
H++++ G + + GR L+ +
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQ 369
Query: 347 SC--MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDI 404
SC +++ + + G L+ A +R+ +W +++ +V A +KL D
Sbjct: 370 SCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHD- 428
Query: 405 EPNNPGNYVSLFNILVSAKLWSEASQI 431
+ + + + LV +L++EA+ +
Sbjct: 429 --KDGVTWTVMISGLVQNELFAEAASL 453
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 126/259 (48%), Gaps = 23/259 (8%)
Query: 84 LKDLNSGKAIHGFAV-----RHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAV 138
L+ L+ G +H + + G + V ++L+S YA+ + EAR +F++MP R+ V
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 139 SWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKM 198
+ N +LT Y + + LF M + V +W ++ ++G++E+++E+ +M
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELFDEM 164
Query: 199 QKMGFKPNEITISSILPACSILESLRMGKEVHCY-GLRHRIGDLSSTTALVYMYAKCSDL 257
P +S ++ + M K + + R D+ S A++ Y + +
Sbjct: 165 ------PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR--DVVSWNAMIKGYIENDGM 216
Query: 258 NLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
++ +F M +K+VV W +M+ +G+ +EA LF M + N V++T ++SG
Sbjct: 217 EEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEM----PERNIVSWTAMISGF 272
Query: 318 SHSRLVDEGLQIFNSMGRD 336
+ + L E L +F M +D
Sbjct: 273 AWNELYREALMLFLEMKKD 291
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/427 (33%), Positives = 216/427 (50%), Gaps = 36/427 (8%)
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+G++ T + +L C + K+ GK IH G N ++ L+ +YA ++
Sbjct: 102 SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +F + RD + WN A+I G ++
Sbjct: 162 AGILFRSLKIRDLIPWN-----------------------------------AMISGYVQ 186
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSS 243
G +E L + M++ P++ T +S+ ACS L+ L GK H ++ I ++
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+ALV MY KCS + VFD + ++V+ W ++I HG E L FE M G
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGC 306
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+PN VTF VL+ C+H LVD+G + F SM RD+ +EP+ HY+ MVD RAGRL EAY
Sbjct: 307 RPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAY 366
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
+F+ + P + WG+LLGACR+ NV+L ++AA K +++P N GNYV N S
Sbjct: 367 EFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 426
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
L AS++R M++ G+ K PG S +++ VH F+ D S+ S+KIY+ + E+
Sbjct: 427 LREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFM 486
Query: 484 LAGYKPD 490
Y PD
Sbjct: 487 DIDYYPD 493
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 1/202 (0%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+L L+ Y ++ A +F L RD++ W ++ S YV GL ++GL I+++M N
Sbjct: 144 YLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQN 203
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+ P+ T +S+ ACS L L GK H ++ + N+ V SALV MY +C S +
Sbjct: 204 RIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDG 263
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
VFD + R+ ++W +++ Y + + + L F +M EG + + T+ V+ C
Sbjct: 264 HRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHG 323
Query: 186 GQTEESLEMLRKMQK-MGFKPN 206
G ++ E M++ G +P
Sbjct: 324 GLVDKGWEHFYSMKRDYGIEPE 345
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S++ + +AL+ Y KC RVFD L R+V++WTSL S Y G + L F
Sbjct: 240 IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFE 299
Query: 61 EMGWNGVKPNAVTVSSILPACS 82
+M G +PN VT +L AC+
Sbjct: 300 KMKEEGCRPNPVTFLVVLTACN 321
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 153/403 (37%), Gaps = 88/403 (21%)
Query: 162 RMSREGVKADKAT--WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSI 219
R+ R V+ + T + + G G+ +E++ +L G + T + +L C
Sbjct: 64 RIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGLL---WSSGLQVEPETYAVLLQECKQ 120
Query: 220 LESLRMGKEVHC------YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV 273
+ GK +H + L + L+ +YA DL + +F + +D++
Sbjct: 121 RKEYTKGKRIHAQMFVVGFALNEYL-----KVKLLILYALSGDLQTAGILFRSLKIRDLI 175
Query: 274 AWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS--------------- 318
WN MI G +E L ++ +M ++ + P+ TF V CS
Sbjct: 176 PWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVM 235
Query: 319 -----------HSRLVD---------EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
S LVD +G ++F+ + +++ ++ ++ + G+
Sbjct: 236 IKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVIT-----WTSLISGYGYHGK 290
Query: 359 LDEAYKFIQRMPLE---PTASAWGALLGACR----VFKNVELAKIAAKKLFDIEPNNPGN 411
+ E K ++M E P + +L AC V K E + K+ + IEP +
Sbjct: 291 VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHF-YSMKRDYGIEPEGQ-H 348
Query: 412 YVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVH-----------TFVV 460
Y ++ + L A EA + +MK P L R+H F+
Sbjct: 349 YAAMVDTLGRAGRLQEAYE--FVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLE 406
Query: 461 GDRSNTGSDKIY----------EFLDELGQKMKLAGYKPDTDY 493
D +N G+ ++ E ++ +KM+ AG K D Y
Sbjct: 407 LDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGY 449
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 133/441 (30%), Positives = 222/441 (50%), Gaps = 45/441 (10%)
Query: 18 CKCIEGARRVFDDLVGRDVVS-------WTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPN 70
C + RR+ D+ ++ W ++ Y+ P + ++ M + V P+
Sbjct: 57 CTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPD 116
Query: 71 AVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD 130
++ ++ A ++ D GK +H AVR G V + F S +++Y + + AR VFD
Sbjct: 117 RYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFD 176
Query: 131 LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEE 190
P R +WNA+IGG G+ E
Sbjct: 177 ENPERKL-----------------------------------GSWNAIIGGLNHAGRANE 201
Query: 191 SLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI---GDLSSTTAL 247
++EM M++ G +P++ T+ S+ +C L L + ++H L+ + D+ +L
Sbjct: 202 AVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSL 261
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ MY KC ++L+ ++F+ M +++VV+W++MI+ A +GN EAL F M GV+PN
Sbjct: 262 IDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNK 321
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ 367
+TF GVLS C H LV+EG F M + +EP +HY C+VD+ SR G+L EA K ++
Sbjct: 322 ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Query: 368 RMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSE 427
MP++P WG L+G C F +VE+A+ A + ++EP N G YV L N+ +W +
Sbjct: 382 EMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKD 441
Query: 428 ASQIRILMKDRGITKTPGCSW 448
++R LMK + + K P S+
Sbjct: 442 VERVRKLMKTKKVAKIPAYSY 462
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 2/189 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D F + I Y K E AR+VFD+ R + SW ++ + G + + +F +M
Sbjct: 151 DEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMK 210
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE--NVFVCSALVSMYARCLS 121
+G++P+ T+ S+ +C L DL+ +H ++ E ++ + ++L+ MY +C
Sbjct: 211 RSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGR 270
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ A +F+ M R+ VSW+ ++ Y N + L F +M GV+ +K T+ V+
Sbjct: 271 MDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSA 330
Query: 182 CMENGQTEE 190
C+ G EE
Sbjct: 331 CVHGGLVEE 339
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+ + N+LI YGKC ++ A +F+++ R+VVSW+S+ Y G + L F +M
Sbjct: 253 SDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHG-----FAVRHGMVENVFVCSALVSMYA 117
GV+PN +T +L AC + GK F + G+ + C +V + +
Sbjct: 313 REFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSH--YGC--IVDLLS 368
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVL 144
R +KEA+ V + MP + V G L
Sbjct: 369 RDGQLKEAKKVVEEMPMKPNVMVWGCL 395
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 243/453 (53%), Gaps = 31/453 (6%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+ SNAL+ + K KC+ + +L Y+ G + LA+F M
Sbjct: 37 LLTSNALVASRWKTKCV-----------------YNTLIRSYLTTGEYKTSLALFTHMLA 79
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+ V+PN +T S++ A ++ G A+HG A++ G + + FV ++ V Y ++
Sbjct: 80 SHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLES 139
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
+R +FD + + V+ N +L A N E + F RM D +W VI G +
Sbjct: 140 SRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMP----VTDVVSWTTVINGFSK 195
Query: 185 NGQTEESLEMLRKM---QKMGFKPNEITISSILPACSILES--LRMGKEVHCYGL-RHRI 238
G ++L + +M ++ PNE T S+L +C+ + +R+GK++H Y + + I
Sbjct: 196 KGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEII 255
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ TAL+ MY K DL ++ +FD + K V AWN +I A A +G K+AL +FE M
Sbjct: 256 LTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMM 315
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
S V PN +T +L+ C+ S+LVD G+Q+F+S+ ++ + P + HY C+VD+ RAG
Sbjct: 316 KSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGL 375
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSL--F 416
L +A FIQ +P EP AS GALLGAC++ +N EL K+L ++P + G YV+L F
Sbjct: 376 LVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTF 435
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWL 449
N L S WSEA ++R M + GI K P S L
Sbjct: 436 NALDSN--WSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 69/295 (23%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLV--------------GR--------------- 34
D F+ + + YG+ +E +R++FDD++ GR
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMP 179
Query: 35 --DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG---VKPNAVTVSSILPACSELKD--L 87
DVVSWT++ + + GL + L +F EM N + PN T S+L +C+ +
Sbjct: 180 VTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGI 239
Query: 88 NSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAY 147
GK IHG+ + ++ + +AL+ MY + ++ A +FD + + +WN +++A
Sbjct: 240 RLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISAL 299
Query: 148 FTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRK---------- 197
+N ++ L +F M V + T A++ C + + +++
Sbjct: 300 ASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPT 359
Query: 198 -----------------------MQKMGFKPNEITISSILPACSILESLRMGKEV 229
+Q + F+P+ + ++L AC I E+ +G V
Sbjct: 360 SEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTV 414
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 146/456 (32%), Positives = 229/456 (50%), Gaps = 33/456 (7%)
Query: 19 KCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSIL 78
K + A + + + + + S+ Y N P L +F EM V P+ + + +L
Sbjct: 88 KTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVL 147
Query: 79 PACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAV 138
AC+ G+ IHG ++ G+V +VFV + LV++Y R + AR V D MP RDAV
Sbjct: 148 KACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV 207
Query: 139 SWNGVLTAYFTNKEYEKGLALFSRMSREGVKA---------------------------D 171
SWN +L+AY ++ ALF M V++ D
Sbjct: 208 SWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRD 267
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKM-QKMGFKPNEITISSILPACSILESLRMGKEVH 230
+WNA++ G E LE+ KM KP+ T+ S+L AC+ L SL G+ VH
Sbjct: 268 VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVH 327
Query: 231 CYGLRHRI---GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGN 287
Y +H I G L+ TALV MY+KC ++ + VF K+DV WN++I ++HG
Sbjct: 328 VYIDKHGIEIEGFLA--TALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGL 385
Query: 288 GKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYS 347
GK+AL +F M+ G KPN +TF GVLS C+H ++D+ ++F M + VEP HY
Sbjct: 386 GKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYG 445
Query: 348 CMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPN 407
CMVD+ R G+++EA + + +P + + +LLGAC+ F +E A+ A +L ++
Sbjct: 446 CMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLR 505
Query: 408 NPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKT 443
+ Y + N+ S W + R M+ + ++
Sbjct: 506 DSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNRS 541
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
FL+ AL+ Y KC I+ A VF RDV +W S+ S GL + L IF EM +
Sbjct: 340 FLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE 399
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSVKE 124
G KPN +T +L AC+ + L+ + + VE + +V + R ++E
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 125 ARAVFDLMPHRDA 137
A + + +P +A
Sbjct: 460 AEELVNEIPADEA 472
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 112/255 (43%), Gaps = 14/255 (5%)
Query: 195 LRKMQKMGFKPNEITISSILPACSILE---SLRMGKEVHCY----GLRHRIGDLSSTTAL 247
LR +QK K + S+ +P S E SL ++ H + GL H S A
Sbjct: 21 LRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAF 80
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ ++ + ++ + + + N++I A A + AL +F ML V P+
Sbjct: 81 AATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDK 140
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ 367
+FT VL C+ +EG QI + LV D + +V+V+ R+G + A K +
Sbjct: 141 YSFTFVLKACAAFCGFEEGRQIHGLFIKSGLV-TDVFVENTLVNVYGRSGYFEIARKVLD 199
Query: 368 RMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD-IEPNNPGNYVSLFNILVSAKLWS 426
RMP+ S W +LL A V+ A+ LFD +E N ++ + + +A L
Sbjct: 200 RMPVRDAVS-WNSLLSAYLEKGLVD----EARALFDEMEERNVESWNFMISGYAAAGLVK 254
Query: 427 EASQIRILMKDRGIT 441
EA ++ M R +
Sbjct: 255 EAKEVFDSMPVRDVV 269
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/453 (33%), Positives = 235/453 (51%), Gaps = 44/453 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S F S +L+H YGKC I ARRVF+ ++ RD+V W +L S YV G+ + +
Sbjct: 173 LESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLK 232
Query: 61 EMGW--NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
MG N + + T SS+L AC + GK IH + ++ V +AL++MYA+
Sbjct: 233 LMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAK 288
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
+ +AR F+ M R+ VSWN A+
Sbjct: 289 SNHLSDARECFESMVVRNVVSWN-----------------------------------AM 313
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
I G +NG+ E++ + +M +P+E+T +S+L +C+ ++ K+V +
Sbjct: 314 IVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGS 373
Query: 239 GD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
D LS +L+ Y++ +L+ + F + + D+V+W ++I A A HG +E+L +FE+
Sbjct: 374 ADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFES 433
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
ML+ ++P+ +TF VLS CSH LV EGL+ F M + +E + HY+C++D+ RAG
Sbjct: 434 MLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 358 RLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFN 417
+DEA + MP EP+ A A G C + + E K AKKL +IEP P NY L N
Sbjct: 493 FIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSN 552
Query: 418 ILVSAKLWSEASQIRILMKDRGIT-KTPGCSWL 449
VS W++A+ +R + KTPGCSWL
Sbjct: 553 AYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 186/392 (47%), Gaps = 57/392 (14%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCG-----LPRQGLAIF 59
+FL N L+ AY K + + A ++FD++ R++V+W L + G
Sbjct: 71 LFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYL 130
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+ + V + V+ ++ C++ ++ +G +H V+ G+ + F ++LV Y +C
Sbjct: 131 SRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKC 190
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ EAR VF+ + RD V WN ++++Y N
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLN----------------------------- 221
Query: 180 GGCMENGQTEESLEMLRKM--QKMGFKPNEITISSILPACSILESLRMGKEVHC--YGLR 235
G +E+ +L+ M K F+ + T SS+L AC I GK++H + +
Sbjct: 222 ------GMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRI----EQGKQIHAILFKVS 271
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
++ D+ TAL+ MYAK + L+ +R F+ M ++VV+WN MI+ A +G G+EA+ LF
Sbjct: 272 YQF-DIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLF 330
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC---MVDV 352
ML ++P+ +TF VLS C+ + E Q+ + + + A+ S ++
Sbjct: 331 GQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTK----KGSADFLSVANSLISS 386
Query: 353 FSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+SR G L EA + EP +W +++GA
Sbjct: 387 YSRNGNLSEALLCFHSIR-EPDLVSWTSVIGA 417
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 166/382 (43%), Gaps = 53/382 (13%)
Query: 82 SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWN 141
+ L L+ K HGF V+ G+ ++F+ + L+ Y + +A +FD MP R+ V+WN
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 142 GVLTAYF-----TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLR 196
++ TN G SR+ V D ++ +I C ++ + +++
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 197 KMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSD 256
M K G + SS P +T+LV+ Y KC
Sbjct: 167 LMVKQGLE------SSCFP----------------------------STSLVHFYGKCGL 192
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM--LRSGVKPNSVTFTGVL 314
+ +R VF+ + +D+V WN ++ + ++G EA L + M ++ + + TF+ +L
Sbjct: 193 IVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLL 252
Query: 315 SGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPT 374
S C +++G QI + + + D + ++++++++ L +A + + M +
Sbjct: 253 SACR----IEQGKQIHAILFKVS-YQFDIPVATALLNMYAKSNHLSDARECFESMVVRNV 307
Query: 375 ASAWGALLGACRVFKNVELAKIAAKKLFD-IEPNNPGNYVSLFNILVSAKLWSEASQIRI 433
S ++G + + E ++ + L + ++P+ L + + +W E Q++
Sbjct: 308 VSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQA 366
Query: 434 LMKDRGITKTPGCSWLQVGNRV 455
+ +TK +L V N +
Sbjct: 367 M-----VTKKGSADFLSVANSL 383
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 239/474 (50%), Gaps = 42/474 (8%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
++N+L Y +C ++ +F+++ RDVVSWTSL Y G + + F +M +
Sbjct: 246 VANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQ 305
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEAR 126
V PN T +S+ AC+ L L G+ +H + G+ +++ V ++++ MY+ C ++ A
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 127 AVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENG 186
+F M RD +SW+ +IGG + G
Sbjct: 366 VLFQGMRCRDIISWS-----------------------------------TIIGGYCQAG 390
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH----CYGLRHRIGDLS 242
EE + M++ G KP + ++S+L + + G++VH C+GL + +
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQ---NST 447
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
++L+ MY+KC + + +F + D+V+ MI A HG KEA+ LFE L+ G
Sbjct: 448 VRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVG 507
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+P+SVTF VL+ C+HS +D G FN M + + P HY CMVD+ RAGRL +A
Sbjct: 508 FRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDA 567
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
K I M + W LL AC+ ++E + AA+++ +++P V+L NI S
Sbjct: 568 EKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSST 627
Query: 423 KLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLD 476
EA+ +R MK +G+ K PG S +++ + V FV GDR + S+ IY L+
Sbjct: 628 GNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 181/363 (49%), Gaps = 37/363 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S V++ ++L+ Y + I+ + RVF ++ R+ V+WT++ + V+ G ++GL F
Sbjct: 139 LLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFS 198
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM + + T + L AC+ L+ + GKAIH + G V + V ++L +MY C
Sbjct: 199 EMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECG 258
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+++ +F+ M RD VSW ++ AY R+ +E VKA
Sbjct: 259 EMQDGLCLFENMSERDVVSWTSLIVAY-------------KRIGQE-VKA---------- 294
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
+E KM+ PNE T +S+ AC+ L L G+++HC L + D
Sbjct: 295 -----------VETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLND 343
Query: 241 -LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
LS + +++ MY+ C +L + +F M +D+++W+T+I G G+E F M
Sbjct: 344 SLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMR 403
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+SG KP +LS + +++ G Q+ +++ +E ++ S +++++S+ G +
Sbjct: 404 QSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 360 DEA 362
EA
Sbjct: 463 KEA 465
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 139/541 (25%), Positives = 234/541 (43%), Gaps = 97/541 (17%)
Query: 21 IEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW--NGVKPNAVTVSSIL 78
+ AR+VFD + D+VSWTS+ YV + L +F M + V P+ +S +L
Sbjct: 56 LRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 79 PACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAV 138
AC + ++ G+++H +AV+ ++ +V+V S+L+ MY R + ++ VF MP R+AV
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 139 SWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKM 198
+W ++T Y++GL FS MSR +D T+
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA-------------------- 215
Query: 199 QKMGFKPNEITISSILPACSILESLRMGKEVHCYGL-RHRIGDLSSTTALVYMYAKCSDL 257
L AC+ L ++ GK +H + + R + L +L MY +C ++
Sbjct: 216 ---------------LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEM 260
Query: 258 NLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
+F+ M ++DVV+W ++I+A G +A+ F M S V PN TF + S C
Sbjct: 261 QDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSAC 320
Query: 318 -SHSRLV--------------DEGLQIFNSMGR-----DHLVEP----------DANHYS 347
S SRLV ++ L + NSM + +LV D +S
Sbjct: 321 ASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWS 380
Query: 348 CMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGACRVFKNVELAK-IAAKKL-F 402
++ + +AG +E +K+ M +PT A +LL +E + + A L F
Sbjct: 381 TIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCF 440
Query: 403 DIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGD 462
+E N+ SL N+ EAS I G T L T ++
Sbjct: 441 GLEQNSTVRS-SLINMYSKCGSIKEASMI------FGETDRDDIVSL-------TAMING 486
Query: 463 RSNTGSDKIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILN 522
+ G K E +D + +K+ G++PD+ + + + C HS +L + F N
Sbjct: 487 YAEHGKSK--EAIDLFEKSLKV-GFRPDSVTFISVL-------TACTHSGQLDLGFHYFN 536
Query: 523 L 523
+
Sbjct: 537 M 537
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 256 DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM--LRSGVKPNSVTFTGV 313
+L +R VFD MP D+V+W ++I N EAL+LF M + V P++ + V
Sbjct: 55 NLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVV 114
Query: 314 LSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEP 373
L C S + G + + L+ S ++D++ R G++D++ + MP
Sbjct: 115 LKACGQSSNIAYGESLHAYAVKTSLL-SSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR- 172
Query: 374 TASAWGALL 382
A W A++
Sbjct: 173 NAVTWTAII 181
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 150/456 (32%), Positives = 239/456 (52%), Gaps = 45/456 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSL-SSCYVNCGLPRQGLAIF 59
M V LS AL+ Y K A VFD + ++ VSWT++ S C N G+ +F
Sbjct: 181 MQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNY-EMGVDLF 239
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNS-GKAIHGFAVRHGMVENVFVCSALVSMYAR 118
M ++PN VT+ S+LPAC EL +S K IHGF+ RHG + + +A ++MY R
Sbjct: 240 RAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCR 299
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
C +V +R +F+ RD V W+++
Sbjct: 300 CGNVSLSRVLFETSKVRDVV-----------------------------------MWSSM 324
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI 238
I G E G E + +L +M+K G + N +T+ +I+ AC+ L VH L+
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK--C 382
Query: 239 GDLSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
G +S AL+ MYAKC L+ +R VF + +KD+V+W++MI A +HG+G EAL +F
Sbjct: 383 GFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIF 442
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
+ M++ G + + + F +LS C+H+ LV+E IF G+ H+ HY+C +++ R
Sbjct: 443 KGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHM-PVTLEHYACYINLLGR 501
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELA-KIAAKKLFDIEPNNPGNYVS 414
G++D+A++ MP++P+A W +LL AC +++A KI A +L EP+NP NYV
Sbjct: 502 FGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVL 561
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQ 450
L I + + A ++R +M+ R + K G S ++
Sbjct: 562 LSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 181/389 (46%), Gaps = 49/389 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D +SN+LI Y K R+VFD+++ RD VS+ S+ + GL + + + EM
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 64 WNGVKPNAVTVSSILPACSELKDLNS-GKAIHGFA-VRHGMVENVFVCSALVSMYARCLS 121
+ G P + V+S+L C+ + + + H V M E+V + +ALV MY +
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
A VFD M ++ VSW +++ N+ YE G+ LF M RE ++ ++ T
Sbjct: 201 HAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT------- 253
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE-SLRMGKEVHCYGLRHRI-G 239
+ S+LPAC L + KE+H + RH
Sbjct: 254 ----------------------------LLSVLPACVELNYGSSLVKEIHGFSFRHGCHA 285
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D T A + MY +C +++LSR +F+ +DVV W++MI A G+ E + L M
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEG----LQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
+ G++ NSVT ++S C++S L+ QI H++ +A ++D++++
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNA-----LIDMYAK 400
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALLGA 384
G L A + + E +W +++ A
Sbjct: 401 CGSLSAAREVFYELT-EKDLVSWSSMINA 428
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 114/247 (46%), Gaps = 11/247 (4%)
Query: 179 IGGCMENGQTEESLEMLR-KMQKMGFKPNEITISSILPACSIL-ESLRMGKEVHCYGLRH 236
+ G + + +E+L + + K+ +G + S++ AC+ E +G ++HC L+
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKA 76
Query: 237 RIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
D + +L+ MYAK S R VFD M +D V++ ++I + G EA+ L
Sbjct: 77 GADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLI 136
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR-DHLVEPDANHYSCMVDVFS 354
+ M G P S +L+ C+ + ++F+++ D ++ + +VD++
Sbjct: 137 KEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYL 196
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAK--IAAKKLFDIEPNNPGNY 412
+ A+ +M ++ S W A++ C +N E+ A + ++ PN
Sbjct: 197 KFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMGVDLFRAMQRENLRPNR---- 251
Query: 413 VSLFNIL 419
V+L ++L
Sbjct: 252 VTLLSVL 258
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 245 bits (626), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 163/517 (31%), Positives = 258/517 (49%), Gaps = 72/517 (13%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S++ L + LI Y K ++ AR++FD + RDVVSWT++ S + CG L +F EM
Sbjct: 45 SNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEM 104
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
VK N T S+L +C +L L G IHG + N+ V SAL+S+YARC +
Sbjct: 105 HREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKM 164
Query: 123 KEAR-------------------------------AVFDLM----PHRDAVSWNGVLTAY 147
+EAR ++F LM D ++ +L A
Sbjct: 165 EEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRAS 224
Query: 148 FTNKEYE-----KGLAL---FSRMS----------------------REGVKA-DKATWN 176
K E GLA+ F R S EG K D +
Sbjct: 225 IVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCT 284
Query: 177 AVIGG-CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
A+I G +N T ++ ++ + M +M K +E+ +SS+L C+ + S+ +G+++H + L+
Sbjct: 285 ALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALK 344
Query: 236 HRI--GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALL 293
D++ +L+ MYAK ++ + F+ M +KDV +W ++I HGN ++A+
Sbjct: 345 SSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAID 404
Query: 294 LFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
L+ M +KPN VTF +LS CSH+ + G +I+++M H +E H SC++D+
Sbjct: 405 LYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDML 464
Query: 354 SRAGRLDEAYKFIQRMP--LEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGN 411
+R+G L+EAY I+ + ++S WGA L ACR NV+L+K+AA +L +EP P N
Sbjct: 465 ARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVN 524
Query: 412 YVSLFNILVSAKLWSEASQIRILMKDRG-ITKTPGCS 447
Y++L ++ + W A R LMK+ G K PG S
Sbjct: 525 YINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 45/278 (16%)
Query: 93 IHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKE 152
IHG ++ +G N+ + L+ +Y + VK AR +FD + RD VSW +++ +
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 153 YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ L LF M RE VKA++ T+ +V+ C + G +E +++ ++K
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK------------ 141
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDV 272
C+ G+L +AL+ +YA+C + +R FD M ++D+
Sbjct: 142 --GNCA--------------------GNLIVRSALLSLYARCGKMEEARLQFDSMKERDL 179
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVD-----EGL 327
V+WN MI + + LF+ ML G KP+ TF +L + ++ GL
Sbjct: 180 VSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGL 239
Query: 328 QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
I GR + +V+ + + G L A+K
Sbjct: 240 AIKLGFGRSSAL------IRSLVNAYVKCGSLANAWKL 271
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 239/451 (52%), Gaps = 41/451 (9%)
Query: 1 MTSDVFLSNALIHAYGKCK-CIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+ S+V LS+ L+ AY K + VF + R++ SW + + G + + +F
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 60 HEMGW--NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
M W + V+P+ T+ IL ACS ++ SG IH ++ G ++FV SALV MY
Sbjct: 122 LRM-WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYV 180
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
+ AR +FD MP RD+V + A
Sbjct: 181 DMGKLLHARKLFDDMPVRDSV-----------------------------------LYTA 205
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH- 236
+ GG ++ G+ L M R+M GF + + + S+L AC L +L+ GK VH + +R
Sbjct: 206 MFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC 265
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
L+ A+ MY KCS L+ + VF M ++DV++W+++I+ + G+ + LF+
Sbjct: 266 SCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFD 325
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
ML+ G++PN+VTF GVLS C+H LV++ F M +++ + P+ HY+ + D SRA
Sbjct: 326 EMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRA 384
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
G L+EA KF++ MP++P + GA+L C+V+ NVE+ + A++L ++P YV+L
Sbjct: 385 GLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTLA 444
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCS 447
+ +A + EA +R MK++ I+K PGCS
Sbjct: 445 GLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/476 (31%), Positives = 240/476 (50%), Gaps = 8/476 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVF-DDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
D NA+I AY + I+ A VF + D +SW +L + Y G + L + M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
NG+K + + ++L S LK L GK +H +++G N FV S +V +Y +C ++
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
K A + L + S + ++ Y + + + LF +S + + W A+ G
Sbjct: 312 KYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNL----VVWTAMFLGY 367
Query: 183 MENGQTEESLEMLRK-MQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GD 240
+ Q + LE+ R + P+ + + S+L ACS+ + GKE+H + LR I D
Sbjct: 368 LNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMD 427
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
TA V MY+KC ++ + +FD ++D V +N MI A HG+ ++ FE+M
Sbjct: 428 KKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G KP+ +TF +LS C H LV EG + F SM + + P+ HY+CM+D++ +A RLD
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 361 EAYKFIQRM-PLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
+A + ++ + +E A GA L AC KN EL K +KL IE +N Y+ + N
Sbjct: 548 KAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAY 607
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL 475
S+ W E +IR M+ + + GCSW + + H F D S+ ++ IY L
Sbjct: 608 ASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 8 SNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYV---------------NC--- 49
SN L++ Y K + AR VFD+++ R+V SW ++ + YV NC
Sbjct: 26 SNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERD 85
Query: 50 ---------------GLPRQGLAIFHEMGW---NGVKPNAVTVSSILPACSELKDLNSGK 91
G + + +F EM + + + TV++++ ++L ++ G+
Sbjct: 86 LITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGE 145
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD--LMPHRDAVSWNGVLTAYFT 149
+HG V+ G F S+L+ MY++C KE +F+ + D+V+ N ++ AY
Sbjct: 146 QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCR 205
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
+ +K L++F R D +WN +I G +NG EE+L+M M++ G K +E +
Sbjct: 206 EGDIDKALSVFWRNPELN---DTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHS 262
Query: 210 ISSILPACSILESLRMGKEVHCYGLR--------------------------------HR 237
++L S L+SL++GKEVH L+ +
Sbjct: 263 FGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYG 322
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
G+L S ++++ Y+ + ++ +FD + +K++V W M + L L
Sbjct: 323 FGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARA 382
Query: 298 MLRSGVK-PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+ + P+S+ VL CS ++ G +I R ++ D + VD++S+
Sbjct: 383 FIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGIL-MDKKLVTAFVDMYSKC 441
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALLGAC 385
G ++ A + E + A++ C
Sbjct: 442 GNVEYAERIFDS-SFERDTVMYNAMIAGC 469
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 166/363 (45%), Gaps = 56/363 (15%)
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGV 143
+K L G H +++ G + LV++Y++ ++EAR VFD M R+ SWN V
Sbjct: 1 MKCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAV 60
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME-NGQTEESLEMLRKM---Q 199
+ AY ++ LF + + D T+N ++ G + +G E++EM +M +
Sbjct: 61 IAAYVKFNNVKEARELF---ESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKE 117
Query: 200 KMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS---TTALVYMYAKC-- 254
K ++ T+++++ + L ++ G+++H G+ + G+ + ++L++MY+KC
Sbjct: 118 KDDIWIDDFTVTTMVKLSAKLTNVFYGEQLH--GVLVKTGNDGTKFAVSSLIHMYSKCGK 175
Query: 255 -------------------------------SDLNLSRNVFDMMPK-KDVVAWNTMIIAN 282
D++ + +VF P+ D ++WNT+I
Sbjct: 176 FKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGY 235
Query: 283 AMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPD 342
A +G +EAL + +M +G+K + +F VL+ S + + G ++ + ++
Sbjct: 236 AQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG---SY 292
Query: 343 ANHY--SCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKK 400
+N + S +VDV+ + G + A SA ++G K VE AK+
Sbjct: 293 SNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVE-----AKR 347
Query: 401 LFD 403
LFD
Sbjct: 348 LFD 350
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 242 bits (617), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 261/521 (50%), Gaps = 85/521 (16%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ DV ++ +L+ Y KC +E A ++F ++ RDVVSW+++ + Y G + +++F
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC- 119
+M +KPNAVT++S+L C+ + GK+IH +A++ + + +A++SMYA+C
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Query: 120 -----------LSVKEARA----------------VFDLMPHR-------DAVSWNGVLT 145
L +K+A A FD+ + D+ + G+L
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 146 AYFTNKEYEKGLALFSRMSREGVKAD--------------------------------KA 173
+Y +G ++ ++ + G ++
Sbjct: 511 TCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTV 570
Query: 174 TWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYG 233
+WN ++ G + +GQ EE++ R+M+ F+PN +T +I+ A + L +LR+G VH
Sbjct: 571 SWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSL 630
Query: 234 LRHRIGDLSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
++ G S T +LV MYAKC + S F + K +V+WNTM+ A A HG
Sbjct: 631 IQ--CGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC 688
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
A+ LF +M + +KP+SV+F VLS C H+ LV+EG +IF MG H +E + HY+CMV
Sbjct: 689 AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMV 748
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPG 410
D+ +AG EA + ++RM ++ + WGALL + R+ N+ L+ A +L +EP NP
Sbjct: 749 DLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPS 808
Query: 411 NYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQV 451
+Y S+ ++ + I K P CSW++V
Sbjct: 809 HY-------------SQDRRLGEVNNVSRIKKVPACSWIEV 836
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 188/382 (49%), Gaps = 40/382 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ SDV++ AL+ Y K + + AR+VFD + +DVV+W ++ S G L +FH
Sbjct: 131 LESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFH 190
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M V + V++ +++PA S+L+ + + +HG ++ G + S L+ MY C
Sbjct: 191 DMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFI--FAFSSGLIDMYCNCA 248
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ A +VF+ + +D SW ++ AY N +E+ L LF M V+
Sbjct: 249 DLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRM---------- 298
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIG 239
N++ +S L A + + L G +H Y ++ IG
Sbjct: 299 -------------------------NKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIG 333
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
D+S T+L+ MY+KC +L ++ +F + +DVV+W+ MI + G EA+ LF +M+
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
R +KPN+VT T VL GC+ G I + +E + + ++ ++++ GR
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADIESELETATAVISMYAKCGRF 452
Query: 360 DEAYKFIQRMPLEPTASAWGAL 381
A K +R+P++ A A+ AL
Sbjct: 453 SPALKAFERLPIKD-AVAFNAL 473
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 189/428 (44%), Gaps = 80/428 (18%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN-GV 67
N LI+AY + + +R +FD + VV W S+ Y GL R+ L F M G+
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARA 127
P+ + + L AC+ D G IH G+ +V++ +ALV MY + + AR
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 128 VFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQ 187
VFD M +D V+W N ++ G +NG
Sbjct: 157 VFDKMHVKDVVTW-----------------------------------NTMVSGLAQNGC 181
Query: 188 TEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDL-SSTTA 246
+ +L + M+ + +++ +++PA S LE + + +H GL + G + + ++
Sbjct: 182 SSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLH--GLVIKKGFIFAFSSG 239
Query: 247 LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
L+ MY C+DL + +VF+ + +KD +W TM+ A A +G +E L LF+ M V+ N
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMN 299
Query: 307 SV---------TFTG-VLSGCS-HSRLVDEGL-----------QIFNSMGRDHLVEP--- 341
V + G ++ G + H V +GL +++ G + E
Sbjct: 300 KVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 342 -----DANHYSCMVDVFSRAGRLDEA---YKFIQRMPLEPTASAWGALLGACRVFKNVEL 393
D +S M+ + +AG+ DEA ++ + R+ ++P A ++L C
Sbjct: 360 NIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC-------- 411
Query: 394 AKIAAKKL 401
A +AA +L
Sbjct: 412 AGVAASRL 419
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 218 SILESLRMGKEVHCYGLRHR---IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVA 274
++L LR K C H + L L+ Y+ +LSR +FD + VV
Sbjct: 7 NLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVL 66
Query: 275 WNTMIIANAMHGNGKEALLLFENMLRS-GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
WN+MI G +EAL F M G+ P+ +FT L C+ S +GL+I + +
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLI 126
Query: 334 GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
L E D + +V+++ +A L A + +M ++ + W ++
Sbjct: 127 AEMGL-ESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT-WNTMV 173
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 229/455 (50%), Gaps = 48/455 (10%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+SNA + Y + A +VF+ L +D+V+W ++ S Y L + ++++ M
Sbjct: 323 TLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHI 382
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GVKP+ T S+L DL+ + + ++ G+ + + +AL+S Y++
Sbjct: 383 IGVKPDEFTFGSLLATS---LDLDVLEMVQACIIKFGLSSKIEISNALISAYSK------ 433
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
N + EK LF R R+ + +WNA+I G
Sbjct: 434 -------------------------NGQIEKADLLFERSLRKNL----ISWNAIISGFYH 464
Query: 185 NGQTEESLEMLRKM--QKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLS 242
NG E LE + ++ P+ T+S++L C SL +G + H Y LRH G
Sbjct: 465 NGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRH--GQFK 522
Query: 243 ST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
T AL+ MY++C + S VF+ M +KDVV+WN++I A + HG G+ A+ ++ M
Sbjct: 523 ETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQ 582
Query: 300 RSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
G V P++ TF+ VLS CSH+ LV+EGL+IFNSM H V + +H+SC+VD+ RAG
Sbjct: 583 DEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGH 642
Query: 359 LDEAYKF--IQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLF 416
LDEA I + W AL AC +++L K+ AK L + E ++P YV L
Sbjct: 643 LDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 702
Query: 417 NILVSAKLWSEASQIRILMKDRGITKTPGCSWLQV 451
NI A +W EA + R + G K GCSW+++
Sbjct: 703 NIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 115/201 (57%), Gaps = 3/201 (1%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++S + +SNALI AY K IE A +F+ + ++++SW ++ S + + G P +GL F
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFS 476
Query: 61 EMGWNGVK--PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+ + V+ P+A T+S++L C L G H + +RHG + + +AL++MY++
Sbjct: 477 CLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQ 536
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNA 177
C +++ + VF+ M +D VSWN +++AY + E E + + M EG V D AT++A
Sbjct: 537 CGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSA 596
Query: 178 VIGGCMENGQTEESLEMLRKM 198
V+ C G EE LE+ M
Sbjct: 597 VLSACSHAGLVEEGLEIFNSM 617
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 196/430 (45%), Gaps = 51/430 (11%)
Query: 50 GLPRQGLAIFHEMGW-NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFV 108
G R L +F ++ ++P+ +VS + L+D G +H +A+R G++ + V
Sbjct: 35 GENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHV 94
Query: 109 CSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
+ L+S+Y R ++ + FD + D SW +L+A F + E +F +M
Sbjct: 95 SNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPE--- 151
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
+ D A WNA+I GC E+G E S+E+ R+M K+G + ++ ++IL C SL GK+
Sbjct: 152 RDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCD-YGSLDFGKQ 210
Query: 229 VHCYGLRHRIGDLSSTT-ALVYMYAKCSDLNLSRNVFDM--MPKKDVVAWNTMIIANAMH 285
VH ++ SS AL+ MY C + + VF+ + +D V +N +I + +
Sbjct: 211 VHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI--DGLA 268
Query: 286 GNGK-EALLLFENMLRSGVKPNSVTFTGVLSGCS--------HSRLVDEGLQ-------- 328
G + E+LL+F ML + ++P +TF V+ CS H + G +
Sbjct: 269 GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNA 328
Query: 329 ------IFNSMGRDH-----LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL---EPT 374
F G H L E D ++ M+ +++A A +RM + +P
Sbjct: 329 TMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPD 388
Query: 375 ASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRI- 433
+G+LL +E+ + K + + + N L+SA +S+ QI
Sbjct: 389 EFTFGSLLATSLDLDVLEMVQACIIKF------GLSSKIEISNALISA--YSKNGQIEKA 440
Query: 434 -LMKDRGITK 442
L+ +R + K
Sbjct: 441 DLLFERSLRK 450
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 172/385 (44%), Gaps = 53/385 (13%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVS-WTSLSSCYVNCGLPRQGLAIFHEM 62
DV+ L+ A K IE A VFD + RD V+ W ++ + G + +F EM
Sbjct: 122 DVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREM 181
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
GV+ + ++IL C + L+ GK +H ++ G V +AL++MY C V
Sbjct: 182 HKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 123 KEARAVFDL--MPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+A VF+ + RD V++N V+ GLA F R
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVI----------DGLAGFKR------------------ 272
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGD 240
+ESL + RKM + +P ++T S++ +CS MG +VH GL + G
Sbjct: 273 --------DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---MGHQVH--GLAIKTGY 319
Query: 241 LSST---TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFEN 297
T A + MY+ D + VF+ + +KD+V WNTMI + GK A+ +++
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 298 MLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG 357
M GVKP+ TF +L+ +++ G +E + ++ +S+ G
Sbjct: 380 MHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS----NALISAYSKNG 435
Query: 358 RLDEAYKFIQRMPLEPTASAWGALL 382
++++A +R L +W A++
Sbjct: 436 QIEKADLLFER-SLRKNLISWNAII 459
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/398 (33%), Positives = 210/398 (52%), Gaps = 12/398 (3%)
Query: 58 IFHEMGWNGVKPNAVTVSSILPACSELK--DLNSGKAIHGFAVRHGMVENVFVCSALVSM 115
F EM V P+ T + AC+ K DL K +H A+R G++ ++F + L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 116 YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
Y+ + A +FD P RD V++N ++ +E + LF M D +W
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLR----DLVSW 217
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N++I G + E++++ +M +G KP+ + I S L AC+ + GK +H Y R
Sbjct: 218 NSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 236 HRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
R+ D T LV YAKC ++ + +F++ K + WN MI AMHGNG+ +
Sbjct: 278 KRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDY 337
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M+ SG+KP+ VTF VL GCSHS LVDE +F+ M + V + HY CM D+
Sbjct: 338 FRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLG 397
Query: 355 RAGRLDEAYKFIQRMPLE----PTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPG 410
RAG ++EA + I++MP + AW LLG CR+ N+E+A+ AA ++ + P + G
Sbjct: 398 RAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGG 457
Query: 411 NYVSLFNILVSAKLWSEASQIR-ILMKDRGITKTPGCS 447
Y + + +A+ W E ++R I+ +D+ + K G S
Sbjct: 458 VYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 103/198 (52%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DV N LI K + I AR +FD + RD+VSW SL S Y R+ + +F EM
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+KP+ V + S L AC++ D GKAIH + R + + F+ + LV YA+C +
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFID 301
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +F+L + +WN ++T + E + F +M G+K D T+ +V+ GC
Sbjct: 302 TAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCS 361
Query: 184 ENGQTEESLEMLRKMQKM 201
+G +E+ + +M+ +
Sbjct: 362 HSGLVDEARNLFDQMRSL 379
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/449 (30%), Positives = 228/449 (50%), Gaps = 37/449 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
M +D+ + +L+ AY +C C+ A R++ +V TS+ SCY G + F
Sbjct: 277 MVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS 336
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+ +K +AV + IL C + ++ G ++HG+A++ G+ V + L++MY++
Sbjct: 337 KTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSK-- 394
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
FD + E L LF ++ + +WN+VI
Sbjct: 395 --------FD---------------------DVETVLFLFEQLQETPL----ISWNSVIS 421
Query: 181 GCMENGQTEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
GC+++G+ + E+ +M G P+ ITI+S+L CS L L +GKE+H Y LR+
Sbjct: 422 GCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE 481
Query: 240 DLSST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+ + TAL+ MYAKC + + +VF + WN+MI ++ G AL + M
Sbjct: 482 NENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEM 541
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
G+KP+ +TF GVLS C+H VDEG F +M ++ + P HY+ MV + RA
Sbjct: 542 REKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACL 601
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
EA I +M ++P ++ WGALL AC + + +E+ + A+K+F ++ N G YV + N+
Sbjct: 602 FTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNL 661
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCS 447
+ +W + ++R +MKD G G S
Sbjct: 662 YATEAMWDDVVRVRNMMKDNGYDGYLGVS 690
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 173/382 (45%), Gaps = 44/382 (11%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V++ +L++ Y K C+ A+ +FD++ RD V W +L Y G +F M
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G P+A T+ ++LP C + ++ G+++HG A + G+ + V +AL+S Y++C +
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +F M + VSWN ++ AY S+ G++
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAY----------------SQSGLQ--------------- 233
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIGDLSS 243
EE++ + + M + + + +TI ++L A E L HC ++ + D+S
Sbjct: 234 ----EEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVNDISV 283
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
T+LV Y++C L + ++ + +V +++ A G+ A++ F + +
Sbjct: 284 VTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 343
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
K ++V G+L GC S +D G+ + + L + ++ ++S+ ++
Sbjct: 344 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLV-VNGLITMYSKFDDVETVL 402
Query: 364 KFIQRMPLEPTASAWGALLGAC 385
+++ P S W +++ C
Sbjct: 403 FLFEQLQETPLIS-WNSVISGC 423
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 47/297 (15%)
Query: 34 RDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGK-- 91
RD+ + SL ++ + + IF ++ + + PN T+S L A + NS K
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATT--TSFNSFKLQ 68
Query: 92 --AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFT 149
+ + G+ V+V ++L+++Y + V A+ +FD MP RD V WN ++ Y
Sbjct: 69 VEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGY-- 126
Query: 150 NKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEIT 209
SR G + D W I M + GF P+ T
Sbjct: 127 --------------SRNGYECD--AWKLFI-----------------VMLQQGFSPSATT 153
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDM 266
+ ++LP C + G+ VH G+ + G D AL+ Y+KC++L + +F
Sbjct: 154 LVNLLPFCGQCGFVSQGRSVH--GVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 267 MPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRL 322
M K V+WNTMI A + G +EA+ +F+NM V+ + VT +LS SH L
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 201/353 (56%), Gaps = 10/353 (2%)
Query: 101 GMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALF 160
G +V+V +ALV MY ++ +A VFD MP R+ V+WN ++T ++EK L
Sbjct: 153 GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 161 SRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM-GFKPNEITISSILPACSI 219
+M V +W +I G + +E++ + +M KPNEITI +ILPA
Sbjct: 213 EKMPNRTV----VSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWN 268
Query: 220 LESLRMGKEVHCY-GLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMP--KKDVVAW 275
L L+M VH Y G R + D+ T +L+ YAKC + + F +P +K++V+W
Sbjct: 269 LGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSW 328
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEG-LQIFNSMG 334
TMI A A+HG GKEA+ +F++M R G+KPN VT VL+ CSH L +E L+ FN+M
Sbjct: 329 TTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMV 388
Query: 335 RDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELA 394
++ + PD HY C+VD+ R GRL+EA K +P+E A W LLGAC V+ + ELA
Sbjct: 389 NEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELA 448
Query: 395 KIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCS 447
+ +KL ++E ++ G+YV + NI + +A + R M RG+ K PG S
Sbjct: 449 ERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM-GWNGV 67
N +I E A + + R VVSWT++ Y P++ + +F M + +
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 68 KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLSVKEAR 126
KPN +T+ +ILPA L DL ++H + + G V ++ V ++L+ YA+C ++ A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 127 AVFDLMPH--RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
F +P+ ++ VSW +++A+ + ++ +++F M R G+K ++ T +V+ C
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSH 372
Query: 185 NGQTEES-LEMLRKM 198
G EE LE M
Sbjct: 373 GGLAEEEFLEFFNTM 387
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVG--RDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
D+ ++N+LI AY KC CI+ A + F ++ +++VSWT++ S + G+ ++ +++F +
Sbjct: 291 DIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKD 350
Query: 62 MGWNGVKPNAVTVSSILPACSE--LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M G+KPN VT+ S+L ACS L + + + + + +V LV M R
Sbjct: 351 MERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 410
Query: 120 LSVKEARAVFDLMP-HRDAVSWNGVLTA 146
++EA + +P AV W +L A
Sbjct: 411 GRLEEAEKIALEIPIEEKAVVWRMLLGA 438
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 211/389 (54%), Gaps = 39/389 (10%)
Query: 65 NGVKPNAVTVSSILPACS-ELKDLNSGKAIHGFAVR--HGMVENVFVCSALVSMYARCLS 121
N V+PN T S+ A + + G+A+H ++ + + FV +ALV YA C
Sbjct: 106 NFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGK 165
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
++EAR++F+ + RE D ATWN ++
Sbjct: 166 LREARSLFERI--------------------------------RE---PDLATWNTLLAA 190
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-D 240
+ + + E+L +M +PNE+++ +++ +C+ L G H Y L++ + +
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
T+L+ +Y+KC L+ +R VFD M ++DV +N MI A+HG G+E + L+++++
Sbjct: 251 QFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLIS 310
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G+ P+S TF +S CSHS LVDEGLQIFNSM + +EP HY C+VD+ R+GRL+
Sbjct: 311 QGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA + I++MP++P A+ W + LG+ + + E +IA K L +E N GNYV L NI
Sbjct: 371 EAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYA 430
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWL 449
W++ + R LMKD + K+PG S L
Sbjct: 431 GVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 106/206 (51%), Gaps = 7/206 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNC---GLPRQGLAIFH 60
D F+ AL+ Y C + AR +F+ + D+ +W +L + Y N + L +F
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M V+PN +++ +++ +C+ L + G H + +++ + N FV ++L+ +Y++C
Sbjct: 209 RMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCG 265
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ AR VFD M RD +N ++ + ++G+ L+ + +G+ D AT+ I
Sbjct: 266 CLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTIS 325
Query: 181 GCMENGQTEESLEMLRKMQKM-GFKP 205
C +G +E L++ M+ + G +P
Sbjct: 326 ACSHSGLVDEGLQIFNSMKAVYGIEP 351
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+T + F+ +LI Y KC C+ AR+VFD++ RDV + ++ G ++G+ ++
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 61 EMGWNGVKPNAVTVSSILPACSE-------LKDLNSGKAIHGFAVRHGMVENVFVCSALV 113
+ G+ P++ T + ACS L+ NS KA++G + VE+ + C LV
Sbjct: 307 SLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPK---VEH-YGC--LV 360
Query: 114 SMYARCLSVKEARAVFDLMPHR-DAVSWNGVLTAYFTNKEYEKG 156
+ R ++EA MP + +A W L + T+ ++E+G
Sbjct: 361 DLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 148/472 (31%), Positives = 237/472 (50%), Gaps = 40/472 (8%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM-- 62
VF+S L+H Y C C++ AR++FD++ R++V+W + + Y GL Q +F ++
Sbjct: 208 VFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
Query: 63 ----GWN-------------------------GVKPNAVTVSSILPACSELKDLNSGKAI 93
W G+KP+ V + +L A + + G +
Sbjct: 268 KDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQL 327
Query: 94 HGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEY 153
HG V+ G F+ + ++ YA +K A F+ S N ++ + N
Sbjct: 328 HGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMV 387
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKM-QKMGFKPNEITISS 212
E+ +F + + D +WNA+I G ++ + +L + R+M KP+ IT+ S
Sbjct: 388 EQAREVFDQTHDK----DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVS 443
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDM---MP 268
+ A S L SL GK H Y I + + T A++ MYAKC + + N+F +
Sbjct: 444 VFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNIS 503
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
+ WN +I +A HG+ K AL L+ ++ +KPNS+TF GVLS C H+ LV+ G
Sbjct: 504 SSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKT 563
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVF 388
F SM DH +EPD HY CMVD+ +AGRL+EA + I++MP++ WG LL A R
Sbjct: 564 YFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTH 623
Query: 389 KNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
NVE+A++AA +L I+P++ G V L N+ A W + + +R M+ R +
Sbjct: 624 GNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDV 675
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 200/437 (45%), Gaps = 42/437 (9%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N ++ Y + + + A ++FD + R VS+T+L Y + + +F EM G+
Sbjct: 111 NIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIM 170
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
N VT+++++ ACS L + + + A++ + VFV + L+ MY CL +K+AR +
Sbjct: 171 LNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKL 230
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
FD MP R+ V+WN +L Y E+ LF +++ + D +W +I GC+ Q
Sbjct: 231 FDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDGCLRKNQL 286
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH---------CYGLRHRI- 238
+E+L +M + G KP+E+ + +L A + G ++H CY
Sbjct: 287 DEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATI 346
Query: 239 ----------------------GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWN 276
++S AL+ + K + +R VFD KD+ +WN
Sbjct: 347 IHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWN 406
Query: 277 TMIIANAMHGNGKEALLLFENMLRSG-VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
MI A + + AL LF M+ S VKP+++T V S S ++EG + + +
Sbjct: 407 AMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNF 466
Query: 336 DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP--LEPTASAWGALLGACRVFKNVEL 393
+ P+ N + ++D++++ G ++ A + T S W A++ + +L
Sbjct: 467 S-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKL 525
Query: 394 AKIAAKKL--FDIEPNN 408
A L I+PN+
Sbjct: 526 ALDLYSDLQSLPIKPNS 542
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 148/284 (52%), Gaps = 13/284 (4%)
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR 135
S L +C+ D+ G+ IH ++ G+ N ++C+++++MYA+C + +A +VF
Sbjct: 46 SALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKL 105
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
D+ S+N ++ Y ++ L LF M ++ +I G +N Q E++E+
Sbjct: 106 DSASFNIMVDGYVRSRRLWDALKLFDVMPERSC----VSYTTLIKGYAQNNQWSEAMELF 161
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKC 254
R+M+ +G NE+T+++++ ACS L + + + ++ ++ G + +T L++MY C
Sbjct: 162 REMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 255 SDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVL 314
L +R +FD MP++++V WN M+ + G ++A LF+ + + V++ ++
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI----VSWGTMI 277
Query: 315 SGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
GC +DE L + M R + + MVD+ S + R
Sbjct: 278 DGCLRKNQLDEALVYYTEMLRCGMKPSEV----MMVDLLSASAR 317
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 237/453 (52%), Gaps = 23/453 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++++ NALI Y + ++ ARR+FD + RD VSW ++ +CY + + + M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 64 WNGVKPNAVTVSSILPACSE----LKDLNSGKAIHGFAVRHG---MVENVFVCSALVSM- 115
+GV+ + VT ++I C E + LN + VR G M+ + CS + ++
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 116 ---YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
CL ++ D+ R N ++T Y + +F ++ +
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVR-----NSLITMYSRCSDLRHAFIVFQQVEANSL---- 388
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
+TWN++I G N ++EE+ +L++M GF PN IT++SILP + + +L+ GKE HCY
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 233 GLRHRIGD--LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
LR + L +LV MYAK ++ ++ VFD M K+D V + ++I G G+
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
AL F++M RSG+KP+ VT VLS CSHS LV EG +F M + HYSCMV
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKK-LFDIEPNNP 409
D++ RAG LD+A +P EP+++ LL AC + N + + AA K L + +P +
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Query: 410 GNYVSLFNILVSAKLWSEASQIRILMKDRGITK 442
G+Y+ L ++ WS+ ++ L+ D G+ K
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 180/371 (48%), Gaps = 7/371 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L L+ Y ++ A+ + ++ + W L Y+ ++ ++++ M
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G++ + T S++ AC+ L D G+ +HG N++VC+AL+SMY R V
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR +FD M RDAVSWN ++ Y + ++ + L RM GV+A TWN + GGC+
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-----HRI 238
E G +L + M+ + + + + L ACS + +L+ GK HC +R H I
Sbjct: 297 EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI 356
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
++ ++ L+ MY++CSDL + VF + + WN++I A + +E L + M
Sbjct: 357 DNVRNS--LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L SG PN +T +L + + G + + R + ++ +VD+++++G
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 359 LDEAYKFIQRM 369
+ A + M
Sbjct: 475 IIAAKRVFDSM 485
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
+S+L C + G+ +H + G+ + + LV+ Y+ + EA+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
+ WN ++ +Y NK +++ ++++ RM +G++AD+ T+ +VI
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVI--------------- 191
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVH--CYGLRHRIGDLSSTTALVYMYA 252
AC+ L G+ VH HR +L AL+ MY
Sbjct: 192 --------------------KACAALLDFAYGRVVHGSIEVSSHRC-NLYVCNALISMYK 230
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ ++++R +FD M ++D V+WN +I EA L + M SGV+ + VT+
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 313 VLSGC 317
+ GC
Sbjct: 291 IAGGC 295
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 237/453 (52%), Gaps = 23/453 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++++ NALI Y + ++ ARR+FD + RD VSW ++ +CY + + + M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 64 WNGVKPNAVTVSSILPACSE----LKDLNSGKAIHGFAVRHG---MVENVFVCSALVSM- 115
+GV+ + VT ++I C E + LN + VR G M+ + CS + ++
Sbjct: 278 LSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALK 337
Query: 116 ---YARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
CL ++ D+ R N ++T Y + +F ++ +
Sbjct: 338 WGKVFHCLVIRSCSFSHDIDNVR-----NSLITMYSRCSDLRHAFIVFQQVEANSL---- 388
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
+TWN++I G N ++EE+ +L++M GF PN IT++SILP + + +L+ GKE HCY
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 233 GLRHRIGD--LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
LR + L +LV MYAK ++ ++ VFD M K+D V + ++I G G+
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEV 508
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
AL F++M RSG+KP+ VT VLS CSHS LV EG +F M + HYSCMV
Sbjct: 509 ALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMV 568
Query: 351 DVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKK-LFDIEPNNP 409
D++ RAG LD+A +P EP+++ LL AC + N + + AA K L + +P +
Sbjct: 569 DLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHL 628
Query: 410 GNYVSLFNILVSAKLWSEASQIRILMKDRGITK 442
G+Y+ L ++ WS+ ++ L+ D G+ K
Sbjct: 629 GHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 180/371 (48%), Gaps = 7/371 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L L+ Y ++ A+ + ++ + W L Y+ ++ ++++ M
Sbjct: 117 DSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMM 176
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G++ + T S++ AC+ L D G+ +HG N++VC+AL+SMY R V
Sbjct: 177 SKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVD 236
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR +FD M RDAVSWN ++ Y + ++ + L RM GV+A TWN + GGC+
Sbjct: 237 VARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCL 296
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-----HRI 238
E G +L + M+ + + + + L ACS + +L+ GK HC +R H I
Sbjct: 297 EAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI 356
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
++ ++ L+ MY++CSDL + VF + + WN++I A + +E L + M
Sbjct: 357 DNVRNS--LITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEM 414
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
L SG PN +T +L + + G + + R + ++ +VD+++++G
Sbjct: 415 LLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGE 474
Query: 359 LDEAYKFIQRM 369
+ A + M
Sbjct: 475 IIAAKRVFDSM 485
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
+S+L C + G+ +H + G+ + + LV+ Y+ + EA+ + +
Sbjct: 87 ASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEI 146
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEM 194
+ WN ++ +Y NK +++ ++++ RM +G++AD+ T+ +VI
Sbjct: 147 LHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVI--------------- 191
Query: 195 LRKMQKMGFKPNEITISSILPACSILESLRMGKEVH--CYGLRHRIGDLSSTTALVYMYA 252
AC+ L G+ VH HR +L AL+ MY
Sbjct: 192 --------------------KACAALLDFAYGRVVHGSIEVSSHRC-NLYVCNALISMYK 230
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ ++++R +FD M ++D V+WN +I EA L + M SGV+ + VT+
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 313 VLSGC 317
+ GC
Sbjct: 291 IAGGC 295
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 238/483 (49%), Gaps = 46/483 (9%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM---G 63
L A +H K A +FD + + + ++ P GL F M
Sbjct: 49 LLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEE 108
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLSV 122
+ P+ +T ++ AC + + GK IH + V++G+ + + V + ++ +Y +
Sbjct: 109 EEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLL 168
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+AR VFD +P D V W+ ++ G
Sbjct: 169 LDARKVFDEIPQPDVVK-----------------------------------WDVLMNGY 193
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--GD 240
+ G E LE+ R+M G +P+E ++++ L AC+ + +L GK +H + + D
Sbjct: 194 VRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESD 253
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ TALV MYAKC + + VF + +++V +W +I A +G K+A+ E + R
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLER 313
Query: 301 S-GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
G+KP+SV GVL+ C+H ++EG + +M + + P HYSC+VD+ RAGRL
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRL 373
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNN----PGNYVSL 415
D+A I++MP++P AS WGALL CR KNVEL ++A K L D+E N V L
Sbjct: 374 DDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQL 433
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL 475
NI S + EAS++R +++ RG+ KTPG S L+V V FV GD S+ +I+ +
Sbjct: 434 SNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVI 493
Query: 476 DEL 478
L
Sbjct: 494 HLL 496
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD + ++ Y + K + AR+VFD++ DVV W L + YV CGL +GL +F EM
Sbjct: 150 SDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM 209
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLS 121
G++P+ +V++ L AC+++ L GK IH F + +E +VFV +ALV MYA+C
Sbjct: 210 LVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGC 269
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE-GVKADKATWNAVIG 180
++ A VF + R+ SW ++ Y +K + R+ RE G+K D V+
Sbjct: 270 IETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLA 329
Query: 181 GCMENGQTEESLEMLRKMQ 199
C G EE ML M+
Sbjct: 330 ACAHGGFLEEGRSMLENME 348
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 147/318 (46%), Gaps = 18/318 (5%)
Query: 111 ALVSMYARCLSVKEARAVFDLMP----HRDAVSWNGVLTAYF----TNKEYEKGLALFSR 162
+L+ RC +VK+ ++ L HR+ + + +LTA+ NK + ++F
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 163 MSREGVKADKATWNAVIGGCMENGQTEESLE---MLRKMQKMGFKPNEITISSILPACSI 219
+ + ++ +I C + Q L ++ K ++ P+ +T ++ AC
Sbjct: 73 IE----IPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLK 128
Query: 220 LESLRMGKEVHCYGLRHRI--GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNT 277
+GK++HC+ +++ + D T ++ +Y + L +R VFD +P+ DVV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDV 188
Query: 278 MIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDH 337
++ G G E L +F ML G++P+ + T L+ C+ + +G I + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 338 LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIA 397
+E D + +VD++++ G ++ A + +++ S W AL+G + + A
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFS-WAALIGGYAAYGYAKKAMTC 307
Query: 398 AKKLFDIEPNNPGNYVSL 415
++L + P + V L
Sbjct: 308 LERLEREDGIKPDSVVLL 325
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 128/420 (30%), Positives = 222/420 (52%), Gaps = 8/420 (1%)
Query: 46 YVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVEN 105
Y+ P+Q L + ++ G P++ T S++ + ++SGK HG A++HG +
Sbjct: 93 YLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQV 152
Query: 106 VFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSR 165
+ V ++L+ MY C ++ A+ +F +P RD VSWN ++ N + LF M
Sbjct: 153 LPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPD 212
Query: 166 EGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRM 225
+ + +WN +I + S+ + R+M + GF+ NE T+ +L AC L+
Sbjct: 213 KNI----ISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 226 GKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAM 284
G+ VH +R + + TAL+ MY KC ++ L+R +FD + ++ V WN MI+A+ +
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDAN 344
HG + L LFE M+ ++P+ VTF GVL GC+ + LV +G ++ M + ++P+
Sbjct: 329 HGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFG 388
Query: 345 HYSCMVDVFSRAGRLDEAYKFIQRMPLE---PTASAWGALLGACRVFKNVELAKIAAKKL 401
H CM +++S AG +EA + ++ +P E P ++ W LL + R N L + AK L
Sbjct: 389 HQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSL 448
Query: 402 FDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVG 461
+ +P N Y L NI W + +++R ++K+R I + PGC + + VH +G
Sbjct: 449 IETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG 508
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ N++I + + A ++FD++ ++++SW + S Y+ P +++F EM
Sbjct: 183 DIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMV 242
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G + N T+ +L AC L G+++H +R + +V + +AL+ MY +C V
Sbjct: 243 RAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVG 302
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
AR +FD + R+ V+WN ++ A+ + E GL LF M ++ D+ T+ V+ GC
Sbjct: 303 LARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCA 362
Query: 184 ENGQTEESLEMLRKM-QKMGFKPN 206
G + M + KPN
Sbjct: 363 RAGLVSQGQSYYSLMVDEFQIKPN 386
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 5/151 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S V + ALI YGKCK + ARR+FD L R+ V+W + + G P GL +F
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCS-ALVSMYARC 119
M ++P+ VT +L C+ ++ G++ + V ++ F + ++Y+
Sbjct: 341 AMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 120 LSVKEARAVFDLMPHRD----AVSWNGVLTA 146
+EA +P D + W +L++
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSS 431
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 81/195 (41%), Gaps = 32/195 (16%)
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N V + + +++L + + GF P+ T S++ + GK H ++
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 236 HRIGD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHG-------- 286
H L +L++MY C L+L++ +F +PK+D+V+WN++I +G
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 287 -----------------------NGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLV 323
N ++ LF M+R+G + N T +L+ C S +
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARL 266
Query: 324 DEGLQIFNSMGRDHL 338
EG + S+ R L
Sbjct: 267 KEGRSVHASLIRTFL 281
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/399 (32%), Positives = 208/399 (52%), Gaps = 50/399 (12%)
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTAL 247
++++E+L K G P+ + +C+ L+SL K+VH + L+ + GD +
Sbjct: 222 KDAIELLDK----GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNS 307
+ M+ +CS + ++ VFD M KD+ +W+ M+ A + +G G +AL LFE M + G+KPN
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 308 VTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ 367
TF V C+ ++E F+SM +H + P HY ++ V + G L EA ++I+
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIR 397
Query: 368 RMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSE 427
+P EPTA W A+ R+ +++L + + D++P+ ++ N +
Sbjct: 398 DLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSK-----AVINKI-------- 444
Query: 428 ASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL------DELGQK 481
TP + N V T +I EF DE +
Sbjct: 445 --------------PTPPPKSFKETNMV----------TSKSRILEFRNLTFYKDEAKEM 480
Query: 482 MKLAG--YKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICG 539
G Y PDT +VL D+DQE K ++L HSE+LA+A+GI+ + ++ + KNLR+CG
Sbjct: 481 AAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCG 540
Query: 540 DCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
DCHN IK MS ++G +IVRD+ RFHHFK+G CSC D W
Sbjct: 541 DCHNFIKIMSKIIGRVLIVRDNKRFHHFKDGKCSCGDYW 579
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
G P+ + +C+ LK L K +H ++ + + + ++SM+ C S+ +A
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+ VFD M +D SW+ ++ AY N + L LF M++ G+K ++ T+ V C
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 186 GQTEESLEMLRKMQ-KMGFKP 205
G EE+ M+ + G P
Sbjct: 351 GGIEEAFLHFDSMKNEHGISP 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L+N +I +G+C I A+RVFD +V +D+ SW + Y + G+ L +F EM
Sbjct: 270 DPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMT 329
Query: 64 WNGVKPNAVTVSSILPACS 82
+G+KPN T ++ AC+
Sbjct: 330 KHGLKPNEETFLTVFLACA 348
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (575), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 146/483 (30%), Positives = 238/483 (49%), Gaps = 46/483 (9%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM---G 63
L A +H K A +FD + + + ++ P GL F M
Sbjct: 49 LLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEE 108
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLSV 122
+ P+ +T ++ AC + + GK IH + V++G+ + + V + ++ +Y +
Sbjct: 109 EEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLL 168
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+AR VFD +P D V W+ ++ G
Sbjct: 169 FDARKVFDEIPQPDVVK-----------------------------------WDVLMNGY 193
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--GD 240
+ G E LE+ ++M G +P+E ++++ L AC+ + +L GK +H + + R D
Sbjct: 194 VRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESD 253
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ TALV MYAKC + + VF+ + +++V +W +I A +G K+A + + R
Sbjct: 254 VFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIER 313
Query: 301 S-GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
G+KP+SV GVL+ C+H ++EG + +M + + P HYSC+VD+ RAGRL
Sbjct: 314 EDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRL 373
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNN----PGNYVSL 415
D+A I++MP++P AS WGALL CR KNVEL ++A + L D+E N V L
Sbjct: 374 DDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQL 433
Query: 416 FNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFL 475
NI S + EA ++R +++ RGI KTPG S L+V V FV GD S+ +I+ +
Sbjct: 434 SNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
Query: 476 DEL 478
L
Sbjct: 494 HLL 496
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 3/215 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD + ++ Y + K + AR+VFD++ DVV W L + YV CGL +GL +F EM
Sbjct: 150 SDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM 209
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARCLS 121
G++P+ +V++ L AC+++ L GK IH F + +E +VFV +ALV MYA+C
Sbjct: 210 LVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGC 269
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE-GVKADKATWNAVIG 180
++ A VF+ + R+ SW ++ Y +K R+ RE G+K D V+
Sbjct: 270 IETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLA 329
Query: 181 GCMENGQTEESLEMLRKMQ-KMGFKPNEITISSIL 214
C G EE ML M+ + G P S I+
Sbjct: 330 ACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIV 364
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 137/287 (47%), Gaps = 18/287 (6%)
Query: 111 ALVSMYARCLSVKEARAVFDLMP----HRDAVSWNGVLTAYF----TNKEYEKGLALFSR 162
+L+ RC +VK+ ++ L HR+ + + +LTA+ NK + ++F
Sbjct: 13 SLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDS 72
Query: 163 MSREGVKADKATWNAVIGGCMENGQTEESLE---MLRKMQKMGFKPNEITISSILPACSI 219
+ + ++ +I C + Q L ++ K ++ P+ +T ++ AC
Sbjct: 73 IE----IPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLK 128
Query: 220 LESLRMGKEVHCYGLRHRI--GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNT 277
+GK++HC+ +++ + D T ++ +Y + L +R VFD +P+ DVV W+
Sbjct: 129 ACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 278 MIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDH 337
++ G G E L +F+ ML G++P+ + T L+ C+ + +G I + +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 338 LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+E D + +VD++++ G ++ A + +++ S W AL+G
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFS-WAALIGG 294
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 212/404 (52%), Gaps = 51/404 (12%)
Query: 71 AVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD 130
A+ VSS A S G+ IH + G + + ++LV Y+ V AR VFD
Sbjct: 70 AIKVSSAQKASSL-----DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFD 124
Query: 131 LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEE 190
P + + W A+I EN + E
Sbjct: 125 ETPEKQNI----------------------------------VLWTAMISAYTENENSVE 150
Query: 191 SLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR---IGDLSSTTAL 247
++E+ ++M+ + + + ++ L AC+ L +++MG+E++ ++ + DL+ +L
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSL 210
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR------S 301
+ MY K + +R +FD +KDV + +MI A++G +E+L LF+ M +
Sbjct: 211 LNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDT 270
Query: 302 GVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
+ PN VTF GVL CSHS LV+EG + F SM D+ ++P H+ CMVD+F R+G L +
Sbjct: 271 VITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKD 330
Query: 362 AYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
A++FI +MP++P W LLGAC + NVEL + +++F+++ ++ G+YV+L NI S
Sbjct: 331 AHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYAS 390
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSN 465
+W E S++R ++ R + PG SW+++G+ ++ FV G +N
Sbjct: 391 KGMWDEKSKMRDRVRKR---RMPGKSWIELGSIINEFVSGPDNN 431
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 130/290 (44%), Gaps = 41/290 (14%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGR-DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
+ +L+ Y ++ AR+VFD+ + ++V WT++ S Y + + +F M
Sbjct: 102 IQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAE 161
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG--MVENVFVCSALVSMYARCLSVK 123
++ + V V+ L AC++L + G+ I+ +++ + ++ + ++L++MY + +
Sbjct: 162 KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETE 221
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+AR +FD +D ++ ++ Y N + ++ L LF +M K + + VI
Sbjct: 222 KARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKM-----KTIDQSQDTVI---- 272
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE-----VHCYGLRHRI 238
PN++T +L ACS + GK + Y L+ R
Sbjct: 273 --------------------TPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPRE 312
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGN 287
+V ++ + L + + MP K + V W T++ A ++HGN
Sbjct: 313 AHFG---CMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGN 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 16/155 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ L N+L++ Y K E AR++FD+ + +DV ++TS+ Y G ++ L +F +M
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 64 W------NGVKPNAVTVSSILPACSELKDLNSGK-----AIHGFAVRHGMVENVFVCSAL 112
+ PN VT +L ACS + GK I + ++ E F C +
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPR--EAHFGC--M 318
Query: 113 VSMYARCLSVKEARAVFDLMPHR-DAVSWNGVLTA 146
V ++ R +K+A + MP + + V W +L A
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGA 353
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 205/413 (49%), Gaps = 39/413 (9%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLVGR-DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
L NALIH Y C I AR+VFD++ D V++++L + Y+ L +F M +
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
V N T+ S L A S+L DL+ ++ H ++ G+ ++ + +AL+ MY + + A
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
R +FD +D V TWN +I +
Sbjct: 282 RRIFDCAIRKDVV-----------------------------------TWNCMIDQYAKT 306
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSST 244
G EE + +LR+M+ KPN T +L +C+ E+ +G+ V RI D
Sbjct: 307 GLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILG 366
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG-- 302
TALV MYAK L + +F+ M KDV +W MI HG +EA+ LF M
Sbjct: 367 TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCK 426
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V+PN +TF VL+ CSH LV EG++ F M + P HY C+VD+ RAG+L+EA
Sbjct: 427 VRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEA 486
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSL 415
Y+ I+ +P+ ++AW ALL ACRV+ N +L + +L ++ +P + + L
Sbjct: 487 YELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILL 539
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 172/373 (46%), Gaps = 43/373 (11%)
Query: 14 AYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVT 73
A+ I A +F+ + ++ + ++ Y P + ++F+++ G+ + +
Sbjct: 68 AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFS 127
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
+ L +CS ++ G+ +HG A+R G + + +AL+ Y C + +AR VFD MP
Sbjct: 128 FITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMP 187
Query: 134 HR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
DAV+++ ++ Y + +K LA L
Sbjct: 188 QSVDAVTFSTLMNGYL--QVSKKALA---------------------------------L 212
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVY 249
++ R M+K N T+ S L A S L L + H + +IG DL TAL+
Sbjct: 213 DLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCI--KIGLDLDLHLITALIG 270
Query: 250 MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVT 309
MY K ++ +R +FD +KDVV WN MI A G +E + L M +KPNS T
Sbjct: 271 MYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
F G+LS C++S G + + + + + DA + +VD++++ G L++A + RM
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEER-IALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 370 PLEPTASAWGALL 382
+ +W A++
Sbjct: 390 K-DKDVKSWTAMI 401
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 102/206 (49%), Gaps = 3/206 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D+ L ALI YGK I ARR+FD + +DVV+W + Y GL + + + +M
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMK 320
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ +KPN+ T +L +C+ + G+ + + + + +ALV MYA+ ++
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG--VKADKATWNAVIGG 181
+A +F+ M +D SW +++ Y + + + LF++M E V+ ++ T+ V+
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 182 CMENGQTEESLEMLRKM-QKMGFKPN 206
C G E + ++M + F P
Sbjct: 441 CSHGGLVMEGIRCFKRMVEAYSFTPK 466
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 222/455 (48%), Gaps = 44/455 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDD---LVGRDVVSWTSLSSCYVNCGLPRQGLA 57
+ S F +ALI Y C + A VF V V W S+ S ++ L
Sbjct: 269 LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALW 328
Query: 58 IFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
+ ++ + + ++ T+S L C +L G +H V G + V S LV ++A
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHA 388
Query: 118 RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
++++A +F +P++D ++++G+
Sbjct: 389 NVGNIQDAHKLFHRLPNKDIIAFSGL---------------------------------- 414
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR 237
I GC+++G + + R++ K+G ++ +S+IL CS L SL GK++H GL +
Sbjct: 415 -IRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIH--GLCIK 471
Query: 238 IGDLS---STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
G S + TALV MY KC +++ +FD M ++DVV+W +I+ +G +EA
Sbjct: 472 KGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M+ G++PN VTF G+LS C HS L++E +M ++ +EP HY C+VD+
Sbjct: 532 FHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLG 591
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVS 414
+AG EA + I +MPLEP + W +LL AC KN L + A+KL P++P Y S
Sbjct: 592 QAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTS 651
Query: 415 LFNILVSAKLWSEASQIRILMKDRGITKTPGCSWL 449
L N + +W + S++R K G K G SW+
Sbjct: 652 LSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 193/391 (49%), Gaps = 11/391 (2%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ +VF++N +I Y + + A +VFD++ R++V+WT++ S Y + G P + + ++
Sbjct: 36 ISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYR 95
Query: 61 EM-GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M N S++L AC + D+ G ++ + + +V + +++V MY +
Sbjct: 96 RMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKN 155
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ EA + F + + SWN +++ Y ++ + LF RM + V +WN +I
Sbjct: 156 GRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNV----VSWNCLI 211
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI- 238
G ++ G + +LE L +MQ+ G + + L ACS L MGK++HC ++ +
Sbjct: 212 SGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLE 270
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVF---DMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+ +AL+ MY+ C L + +VF + V WN+M+ ++ + AL L
Sbjct: 271 SSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLL 330
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
+ +S + +S T +G L C + + GLQ+ +S+ E D S +VD+ +
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLVVVSGYELDYIVGSILVDLHAN 389
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALLGACR 386
G + +A+K R+P + + G + G +
Sbjct: 390 VGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 202/465 (43%), Gaps = 81/465 (17%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N LI Y K ++ A +F + +VVSW L S +V+ G PR L M G+
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLV 235
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
+ + L ACS L GK +H V+ G+ + F SAL+ MY+ C S+ A V
Sbjct: 236 LDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADV 295
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F H++ ++ V + A WN+++ G + N +
Sbjct: 296 F----HQEKLA----------------------------VNSSVAVWNSMLSGFLINEEN 323
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC------YGLRHRIGDLS 242
E +L +L ++ + + T+S L C +LR+G +VH Y L + +G +
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSI- 382
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
LV ++A ++ + +F +P KD++A++ +I G A LF +++ G
Sbjct: 383 ----LVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLG 438
Query: 303 VKPNSVTFTGVLSGCS-----------HSRLVDEGLQ-----------IFNSMGR----- 335
+ + + +L CS H + +G + ++ G
Sbjct: 439 LDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGV 498
Query: 336 ---DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRVFK 389
D ++E D ++ ++ F + GR++EA+++ +M +EP + LL ACR
Sbjct: 499 VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSG 558
Query: 390 NVELAKIAAKKL---FDIEPNNPGNYVSLFNILVSAKLWSEASQI 431
+E A+ + + + +EP +Y + ++L A L+ EA+++
Sbjct: 559 LLEEARSTLETMKSEYGLEPYLE-HYYCVVDLLGQAGLFQEANEL 602
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 149/314 (47%), Gaps = 12/314 (3%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
+++ L C +++ G++I ++ G+ +NVF+ + ++SMY + +A VFD M
Sbjct: 8 IAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS 67
Query: 134 HRDAVSWNGVLTAYFTNKEYEKGLALFSRM-SREGVKADKATWNAVIGGCMENGQTEESL 192
R+ V+W +++ Y ++ + K + L+ RM E A++ ++AV+ C G + +
Sbjct: 68 ERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGI 127
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT--ALVYM 250
+ ++ K + + + ++S++ ++ G+ + I SST+ L+
Sbjct: 128 LVYERIGKENLRGDVVLMNSVVDM-----YVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTF 310
Y K ++ + +F MP+ +VV+WN +I G+ + AL M R G+ +
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPR-ALEFLVRMQREGLVLDGFAL 241
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFI--QR 368
L CS L+ G Q+ + + L E S ++D++S G L A ++
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGL-ESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 369 MPLEPTASAWGALL 382
+ + + + W ++L
Sbjct: 301 LAVNSSVAVWNSML 314
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 213 bits (541), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 130/398 (32%), Positives = 199/398 (50%), Gaps = 16/398 (4%)
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH---CYGLRHRIGD 240
++G+ +++L + + M + + + + C E L+ K VH + H D
Sbjct: 231 KHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL--D 288
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
LSS L+ MY+ C N + +VF+ M +K++ W +I A +G G++A+ +F
Sbjct: 289 LSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKE 348
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G P+ F G+ C VDEGL F SM RD+ + P Y +V++++ G LD
Sbjct: 349 EGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLD 408
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA +F++RMP+EP W L+ RV N+EL A+ + ++P I V
Sbjct: 409 EALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPV 468
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
A + S L K GI V + + F GD + +D++++ L L
Sbjct: 469 KASDVEKES----LKKRSGILHG-------VKSSMQEFRAGDTNLPENDELFQLLRNLKM 517
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
M GY +T L D+DQE K L HSE++A A +LN + V KNLR+C D
Sbjct: 518 HMVEVGYVAETRMALHDIDQESKETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVD 577
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CHNA+K MS++VG +I RD RFH KNG C+C+D W
Sbjct: 578 CHNALKIMSDIVGREVITRDIKRFHQMKNGACTCKDYW 615
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 40/211 (18%)
Query: 81 CSELKDLNSGKAIHG---FAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDA 137
C E + L K +HG +V H + + V L+ MY+ C EA +VF+ M ++
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHV---LLEMYSNCGLANEAASVFEKMSEKNL 320
Query: 138 VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRK 197
+W ++ + N E + +FSR EG D + + C G +E L
Sbjct: 321 ETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFES 380
Query: 198 MQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDL 257
M + YG+ I D S LV MYA L
Sbjct: 381 MSR------------------------------DYGIAPSIEDYVS---LVEMYALPGFL 407
Query: 258 NLSRNVFDMMP-KKDVVAWNTMIIANAMHGN 287
+ + + MP + +V W T++ + +HGN
Sbjct: 408 DEALEFVERMPMEPNVDVWETLMNLSRVHGN 438
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 227/447 (50%), Gaps = 41/447 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR-DVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
D + N+L+ Y K + + A ++F + + +W ++ Y + + +F ++
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G++ ++ + +S++ +CS + + GK++H + V+ + + V ++L+ +Y +
Sbjct: 425 QNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGK---- 480
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ DL V+W RM E + TWNA+I
Sbjct: 481 -----MGDL-----TVAW---------------------RMFCEA-DTNVITWNAMIASY 508
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY--GLRHRIGD 240
+ Q+E+++ + +M FKP+ IT+ ++L AC SL G+ +H Y H + +
Sbjct: 509 VHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEM-N 567
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
LS + AL+ MYAKC L SR +FD +KD V WN MI MHG+ + A+ LF+ M
Sbjct: 568 LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
S VKP TF +LS C+H+ LV++G ++F M + V+P+ HYSC+VD+ SR+G L+
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLE 686
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA + MP P WG LL +C E+ A++ +P N G Y+ L N+
Sbjct: 687 EAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYS 746
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCS 447
+A W EA + R +M++ G+ K G S
Sbjct: 747 AAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 207/438 (47%), Gaps = 41/438 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S F+ +++ Y K A F +L D+ SWTS+ + G + +F
Sbjct: 261 LASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFW 320
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM G+ P+ V +S ++ ++ + GKA HGF +RH + VC++L+SMY +
Sbjct: 321 EMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCK-- 378
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
F+L+ + LF R+S EG +K WN ++
Sbjct: 379 --------FELLSVAE---------------------KLFCRISEEG---NKEAWNTMLK 406
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
G + + +E+ RK+Q +G + + + +S++ +CS + ++ +GK +HCY ++ +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+S +L+ +Y K DL ++ +F +V+ WN MI + ++A+ LF+ M+
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMV 525
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
KP+S+T +L C ++ ++ G Q+ + + E + + + ++D++++ G L
Sbjct: 526 SENFKPSSITLVTLLMACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHL 584
Query: 360 DEAYKFIQRMPLEPTASAWGALLGACRVFKNVE--LAKIAAKKLFDIEPNNPGNYVSLFN 417
+++ + + A W ++ + +VE +A + D++P P +++L +
Sbjct: 585 EKSRELFDAGN-QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGP-TFLALLS 642
Query: 418 ILVSAKLWSEASQIRILM 435
A L + ++ + M
Sbjct: 643 ACTHAGLVEQGKKLFLKM 660
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 173/384 (45%), Gaps = 35/384 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
++ ++F+++ LI +Y + RVF + RD+ W S+ + + G + L F
Sbjct: 55 LSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFF 114
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARC 119
M +G P+ T ++ AC+EL + G +HG ++HG + N V ++ V Y++C
Sbjct: 115 SMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKC 174
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+++A VFD MP RD V+W +++ + N E E GL +M G D
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD-------- 226
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
KPN T+ ACS L +L+ G+ +H + +++ +
Sbjct: 227 ------------------------KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLA 262
Query: 240 DLSST-TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
+++ Y+K + + + F + +D+ +W ++I + A G+ +E+ +F M
Sbjct: 263 SSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEM 322
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
G+ P+ V + +++ LV +G + F+ H D+ + ++ ++ +
Sbjct: 323 QNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMYCKFEL 381
Query: 359 LDEAYKFIQRMPLEPTASAWGALL 382
L A K R+ E AW +L
Sbjct: 382 LSVAEKLFCRISEEGNKEAWNTML 405
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 134/323 (41%), Gaps = 58/323 (17%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
+S IL C + L S + + + G+ EN+FV S L+S YA + VF L+
Sbjct: 29 ISVIL--CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVT 86
Query: 134 HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLE 193
RD WN ++ A+F+N +Y + L F M + +GQ+
Sbjct: 87 RRDIFLWNSIIKAHFSNGDYARSLCFFFSM-------------------LLSGQS----- 122
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTAL----VY 249
P+ T ++ AC+ L +G VH L+H G TA+ VY
Sbjct: 123 -----------PDHFTAPMVVSACAELLWFHVGTFVHGLVLKH--GGFDRNTAVGASFVY 169
Query: 250 MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV---KPN 306
Y+KC L + VFD MP +DVVAW +I + +G + L M +G KPN
Sbjct: 170 FYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPN 229
Query: 307 SVTFTGVLSGCSHSRLVDE-----GLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
T CS+ + E G + N + V+ S M +S++G E
Sbjct: 230 PRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQ------SSMFSFYSKSGNPSE 283
Query: 362 AYKFIQRMPLEPTASAWGALLGA 384
AY + + E S W +++ +
Sbjct: 284 AYLSFRELGDEDMFS-WTSIIAS 305
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 241/493 (48%), Gaps = 37/493 (7%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
S+ LSN+L+ Y +E A +VFD++ DV+SW SL S YV G ++G+ +F
Sbjct: 86 FVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFL 145
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE-NVFVCSALVSMYARC 119
E+ + V PN + ++ L AC+ L G IH V+ G+ + NV V + L+ MY +C
Sbjct: 146 ELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC 205
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV----------- 168
+ +A VF M +D VSWN ++ + N + E GL F +M
Sbjct: 206 GFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFV 265
Query: 169 ----------------KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISS 212
+ ++WN ++ G + + ++ E+ E KM G + +E ++S
Sbjct: 266 KSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSI 325
Query: 213 ILPACSILESLRMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
+L A + L + G +H H++G + +AL+ MY+KC L + +F MP+
Sbjct: 326 VLAAVAALAVVPWGSLIH--ACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPR 383
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSG-VKPNSVTFTGVLSGCSHSRLVDE-GL 327
K+++ WN MI A +G+ EA+ LF + + +KP+ TF +L+ CSH + E L
Sbjct: 384 KNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVML 443
Query: 328 QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRV 387
F M ++ ++P H ++ + G + +A + IQ AW ALLGAC
Sbjct: 444 GYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSA 503
Query: 388 FKNVELAKIAAKKLFDIEPNNPGN--YVSLFNILVSAKLWSEASQIRILMKDRGITKTPG 445
K+++ AK A K+ ++ + Y+ + N+ + W E QIR +M++ G+ K G
Sbjct: 504 RKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVG 563
Query: 446 CSWLQVGNRVHTF 458
SW+ + ++
Sbjct: 564 SSWIDSRTKCSSY 576
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 78/320 (24%)
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+G KP+A + +L ++ + +HG+ +HG V N + ++L+ Y S+++
Sbjct: 49 DGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLED 108
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A VFD MP D +SWN +++ Y + +++G+ LF + R V
Sbjct: 109 AHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDV---------------- 152
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--GDLS 242
PNE + ++ L AC+ L +G +H ++ + G++
Sbjct: 153 -------------------FPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVV 193
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
L+ MY KC ++ + VF M +KD V+WN ++
Sbjct: 194 VGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIV----------------------- 230
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ CS + ++ GL F+ M PD Y+ ++D F ++G + A
Sbjct: 231 ------------ASCSRNGKLELGLWFFHQMP-----NPDTVTYNELIDAFVKSGDFNNA 273
Query: 363 YKFIQRMPLEPTASAWGALL 382
++ + MP P +S+W +L
Sbjct: 274 FQVLSDMP-NPNSSSWNTIL 292
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 112/239 (46%), Gaps = 9/239 (3%)
Query: 160 FSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKM---GFKPNEITISSILPA 216
F+ S G A +W+ ++ G S+ +LR ++ G KP+ + +L
Sbjct: 9 FTTRSHVGSTASSNSWSTIVPALARFG----SIGVLRAAVELINDGEKPDASPLVHLLRV 64
Query: 217 CSILESLRMGKEVHCYGLRHR-IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAW 275
+ + +++H Y +H + + + +L+ Y L + VFD MP DV++W
Sbjct: 65 SGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISW 124
Query: 276 NTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGR 335
N+++ G +E + LF + RS V PN +FT L+ C+ L G I + + +
Sbjct: 125 NSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVK 184
Query: 336 DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELA 394
L + + +C++D++ + G +D+A Q M + T S W A++ +C +EL
Sbjct: 185 LGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS-WNAIVASCSRNGKLELG 242
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 211 bits (536), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 221/447 (49%), Gaps = 48/447 (10%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
ALI Y K + + RVF+ + +D+VSW +L S ++ G ++ L +F M V+
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVE 182
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
+ T+SS++ C+ LK L GK +H V G + V + +A++S Y+ + EA V
Sbjct: 183 ISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTAMISFYSSVGLINEAMKV 241
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
++ + V D+ N++I GC+ N
Sbjct: 242 YNSL----------------------------------NVHTDEVMLNSLISGCIRNRNY 267
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR-IGDLSSTTAL 247
+E+ ++ + +PN +SS L CS L +GK++HC LR+ + D L
Sbjct: 268 KEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGL 322
Query: 248 VYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR--SGVKP 305
+ MY KC + +R +F +P K VV+W +MI A A++G+G +AL +F M SGV P
Sbjct: 323 MDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLP 382
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
NSVTF V+S C+H+ LV EG + F M + + P HY C +D+ S+AG +E ++
Sbjct: 383 NSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRL 442
Query: 366 IQRMPLEPTAS----AWGALLGACRVFKNVELAKIAAKKLF-DIEPNNPGNYVSLFNILV 420
++RM S W A+L AC + ++ + A++L + P N YV + N
Sbjct: 443 VERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYA 502
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCS 447
+ W ++R +K++G+ KT G S
Sbjct: 503 AMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDL-VGRDVVSWTSL-SSCYVNCGLPRQGLAIFHEM 62
V L A+I Y I A +V++ L V D V SL S C N L + +
Sbjct: 219 VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ- 277
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+PN +SS L CS+ DL GK IH A+R+G V + +C+ L+ MY +C +
Sbjct: 278 -----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQI 332
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSRE--GVKADKATWNAVIG 180
+AR +F +P + VSW ++ AY N + K L +F M E GV + T+ VI
Sbjct: 333 VQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVIS 392
Query: 181 GCMENGQTEESLEMLRKMQK 200
C G +E E M++
Sbjct: 393 ACAHAGLVKEGKECFGMMKE 412
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 103/206 (50%), Gaps = 11/206 (5%)
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH--RIGDLS 242
+G ++L + ++ + + T + +L ACS+L G++VH ++ G +S
Sbjct: 62 SGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS 121
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
T AL+ MY+K L S VF+ + +KD+V+WN ++ +G GKEAL +F M R
Sbjct: 122 KT-ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM---GRDHLVEPDANHYSCMVDVFSRAGRL 359
V+ + T + V+ C+ +++ +G Q+ + GRD +V A M+ +S G +
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTA-----MISFYSSVGLI 235
Query: 360 DEAYKFIQRMPLEPTASAWGALLGAC 385
+EA K + + +L+ C
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGC 261
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
SD L N L+ YGKC I AR +F + + VVSWTS+ Y G + L IF E
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFRE 372
Query: 62 M--GWNGVKPNAVTVSSILPACSELKDLNSGKAIHG-FAVRHGMVENV--FVCSALVSMY 116
M +GV PN+VT ++ AC+ + GK G ++ +V +VC + +
Sbjct: 373 MCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVC--FIDIL 430
Query: 117 ARCLSVKEARAVFDLMPHRDAVS-----WNGVLTAYFTNKEYEKGLALFSRMSRE 166
++ +E + + M D S W VL+A N + +G + R+ E
Sbjct: 431 SKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEE 485
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 233/482 (48%), Gaps = 42/482 (8%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+D+ L NAL+ Y C + A VF + ++VSW S+ S G Q + ++ +
Sbjct: 333 ADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRL 392
Query: 63 -GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
+ +P+ T S+ + A +E + GK +HG + G +VFV + L+SMY +
Sbjct: 393 LRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNRE 452
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ A+ VFD+M RD V W ++ + E + F M RE ++D + ++VIG
Sbjct: 453 AESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIG- 511
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-D 240
ACS + LR G+ HC +R
Sbjct: 512 ----------------------------------ACSDMAMLRQGEVFHCLAIRTGFDCV 537
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+S ALV MY K + +F + D+ WN+M+ A + HG ++AL FE +L
Sbjct: 538 MSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
+G P++VT+ +L+ CSH +G ++N M ++ ++ HYSCMV++ S+AG +D
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVD 656
Query: 361 EAYKFIQRMPL-EPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNIL 419
EA + I++ P A W LL AC +N+++ AA+++ ++P + ++ L N+
Sbjct: 657 EALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLY 716
Query: 420 VSAKLWSEASQIRILMKDRGITKTPGCSWLQV-GNRVHTFVVGDRSNTGSDKIYEFLDEL 478
W + +++R ++ +K PG SW++V N F GD+SN + + + DEL
Sbjct: 717 AVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP--EVVSQAQDEL 774
Query: 479 GQ 480
+
Sbjct: 775 NR 776
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 225/489 (46%), Gaps = 63/489 (12%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSC--YVNCG--LPRQ--GLAIF 59
+ +N LI Y +C +E AR+VFD + R++V+ LS+ YV+ G L Q L F
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM---VENVFVCSALVSMY 116
+ + + A +V + C + L + IH + G E+ + + L+SMY
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEK-GLALFSRMSREGVKADKATW 175
RC S+++AR VFD MPHR+ VS+N + +AY N ++ L + M+ E VK
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK------ 196
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
PN T +S++ C++LE + MG ++ ++
Sbjct: 197 -----------------------------PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIK 227
Query: 236 HRIGD-LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
D + T+++ MY+ C DL +R +FD + +D VAWNTMI+ + + ++ L+
Sbjct: 228 LGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMF 287
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSH------SRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
F NML SGV P T++ VL+GCS +L+ + + +S+ D +
Sbjct: 288 FRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA-------DLPLDNA 340
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNN 408
++D++ G + EA+ R+ P +W +++ C E A + ++L +
Sbjct: 341 LLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 409 PGNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGS 468
P Y F+ +SA E L+ + +TK + VG + + +R +
Sbjct: 400 PDEYT--FSAAISATAEPERFVHGKLLHGQ-VTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 469 DKIYEFLDE 477
K+++ + E
Sbjct: 457 QKVFDVMKE 465
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 159/321 (49%), Gaps = 38/321 (11%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYV-NCGLPRQGLAIFH 60
T + +N LI Y +C +E AR+VFD + R+VVS+ +L S Y N +
Sbjct: 129 TESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTT 188
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M + VKPN+ T +S++ C+ L+D+ G +++ ++ G +NV V ++++ MY+ C
Sbjct: 189 HMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCG 248
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ AR +FD + +RDAV+WN ++ N + E GL F M GV + T++ V+
Sbjct: 249 DLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLN 308
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL-RHRIG 239
G CS L S +GK +H + +
Sbjct: 309 G-----------------------------------CSKLGSYSLGKLIHARIIVSDSLA 333
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
DL AL+ MY C D+ + VF + ++V+WN++I + +G G++A+L++ +L
Sbjct: 334 DLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLL 393
Query: 300 R-SGVKPNSVTFTGVLSGCSH 319
R S +P+ TF+ +S +
Sbjct: 394 RMSTPRPDEYTFSAAISATAE 414
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 206 bits (523), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 231/500 (46%), Gaps = 64/500 (12%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM--GWNG 66
N++I YGKC A +F RD+VSW S+ S + G + +F E+ ++
Sbjct: 433 NSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSC 492
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFV------------------ 108
K + TV +IL +C L GK++H + + G + + F+
Sbjct: 493 SKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVI 552
Query: 109 --CSA----LVSMYARCLSVKEARAVFDLMPHRDAVSWNG-------------------- 142
C++ L S+ A +E + DL+ +S +G
Sbjct: 553 SGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLR 612
Query: 143 ---------VLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLE 193
++T Y K+ E + +F +S + +WN VI +N E +
Sbjct: 613 ELDTQLQNTLITMYGRCKDIESAVKVFGLIS----DPNLCSWNCVISALSQNKAGREVFQ 668
Query: 194 MLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYA 252
+ R ++ +PNEIT +L A + L S G + HC+ +R + + ALV MY+
Sbjct: 669 LFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYS 725
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RSGVKPNSVTFT 311
C L VF + AWN++I A+ HG G++A+ LF+ + S ++PN +F
Sbjct: 726 SCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFI 785
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
+LS CSHS +DEGL + M V+P H +VD+ RAG+L EAY+FI +
Sbjct: 786 SLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGE 845
Query: 372 EPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQI 431
A WGALL AC + +L K A+ LF++EP+N Y+SL N V W EA ++
Sbjct: 846 PQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRL 905
Query: 432 RILMKDRGITKTPGCSWLQV 451
R +++D + K PG S + V
Sbjct: 906 RKMVEDNALKKLPGYSVIDV 925
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 211/474 (44%), Gaps = 71/474 (14%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM-G 63
V + N++I Y KC E A VF++LV RDV+S ++ + + G+ + I ++M
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS 385
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVF-VCSALVSMYARCLSV 122
+ ++P+ TV SI C +L G+A+HG+ VR M V ++++ MY +C
Sbjct: 386 VDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLT 445
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALF---------SRMSREGVKA--- 170
+A +F HRD VSWN +++A+ N K LF S+ S V A
Sbjct: 446 TQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILT 505
Query: 171 --------------------------------------DKATWNAVIGGCMENGQTEESL 192
D +WN+VI GC +G ESL
Sbjct: 506 SCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESL 565
Query: 193 EMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIGDLSSTTALVYM 250
+ M + G + + IT+ + A L + G+ H ++ R D L+ M
Sbjct: 566 RAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITM 625
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTF 310
Y +C D+ + VF ++ ++ +WN +I A + + G+E LF N+ ++PN +TF
Sbjct: 626 YGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITF 682
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP--DANHY--SCMVDVFSRAGRLDEAYKFI 366
G+LS + G+Q HL+ AN + + +VD++S G L+ K
Sbjct: 683 VGLLSASTQLGSTSYGMQ-----AHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVF 737
Query: 367 QRMPLEPTASAWGALLGACRVFKNVELAKIAAKKL---FDIEPNNPGNYVSLFN 417
+ + + SAW +++ A E A K+L ++EPN +++SL +
Sbjct: 738 RNSGVN-SISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKS-SFISLLS 789
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 171/390 (43%), Gaps = 44/390 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D+ S+ L+ YG+ + + +FD+L +DV+ W S+ + G + +F
Sbjct: 118 LLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFI 177
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
EM G + ++ T+ A S L +H A+ G+V + +C+AL+++YA+
Sbjct: 178 EMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGE 237
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++ A VF M HRD VSW N ++
Sbjct: 238 NLSSAECVFTHMEHRDIVSW-----------------------------------NTIMT 262
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
C+ NG +SL+ + M G + + +T S ++ ACS +E L +G+ +H GL + G
Sbjct: 263 KCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLH--GLVIKSGY 320
Query: 240 ----DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+S +++ MY+KC D + VF+ + +DV++ N ++ A +G +EA +
Sbjct: 321 SPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGIL 380
Query: 296 ENMLR-SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
M ++P+ T + S C EG + R + + ++D++
Sbjct: 381 NQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYG 440
Query: 355 RAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+ G +A + + + +W +++ A
Sbjct: 441 KCGLTTQA-ELLFKTTTHRDLVSWNSMISA 469
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D L N LI YG+CK IE A +VF + ++ SW + S R+ +F +
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL- 673
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
++PN +T +L A ++L + G H +R G N FV +ALV MY+ C ++
Sbjct: 674 --KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLE 731
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG-VKADKATWNAVIGGC 182
VF +WN V++A+ + EK + LF +S ++ +K+++ +++ C
Sbjct: 732 TGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSAC 791
Query: 183 MENGQTEESLEMLRKM-QKMGFKP 205
+G +E L ++M +K G KP
Sbjct: 792 SHSGFIDEGLSYYKQMEEKFGVKP 815
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 36/229 (15%)
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
+++H FA++ G+++++ S L++ Y R + + +FD + +D + WN ++TA N
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
Y + LF M +G + D T SL + RK
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAA-------SALSSLHLSRK------------- 206
Query: 211 SSILPACSILESLRMGKEVHCYGLRH-RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
CS+L HC + +GD S AL+ +YAK +L+ + VF M
Sbjct: 207 ------CSML---------HCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCS 318
+D+V+WNT++ +G+ +++L F++M SG + ++VTF+ V+S CS
Sbjct: 252 RDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 193/393 (49%), Gaps = 21/393 (5%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+ + L NALI Y KC +E +R FD + +++V W +L S Y N P L++F +M
Sbjct: 349 TGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP-ICLSLFLQM 407
Query: 63 GWNGVKPNAVTVSSILPAC--SELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
G +P T S+ L +C +EL+ L H VR G +N +V S+L+ YA+
Sbjct: 408 LQMGFRPTEYTFSTALKSCCVTELQQL------HSVIVRMGYEDNDYVLSSLMRSYAKNQ 461
Query: 121 SVKEARAVFDLMP-HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+ +A + D V N V Y +Y + + L S + + D +WN I
Sbjct: 462 LMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE----QPDTVSWNIAI 517
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI- 238
C + EE +E+ + M + +P++ T SIL CS L L +G +H GL +
Sbjct: 518 AACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIH--GLITKTD 575
Query: 239 ---GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
D L+ MY KC + VF+ +K+++ W +I +HG G+EAL F
Sbjct: 576 FSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKF 635
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
+ L G KP+ V+F +L+ C H +V EG+ +F M +D+ VEP+ +HY C VD+ +R
Sbjct: 636 KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLAR 694
Query: 356 AGRLDEAYKFIQRMPLEPTASAWGALLGACRVF 388
G L EA I+ MP A W L C F
Sbjct: 695 NGYLKEAEHLIREMPFPADAPVWRTFLDGCNRF 727
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 204/442 (46%), Gaps = 17/442 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ + N+LI AYGKC A R+F D D+VSW ++ P + L +F M
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G PN T S+L S ++ L+ G+ IHG +++G + + +AL+ YA+C +++
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
++R FD + ++ V WN +L+ Y NK+ L+LF +M + G + + T++ + C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGY-ANKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC 427
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS 243
E ++ + +MG++ N+ +SS++ S ++ M + +
Sbjct: 428 ----VTELQQLHSVIVRMGYEDNDYVLSSLMR--SYAKNQLMNDALLLLDWASGPTSVVP 481
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+ +Y++ + S + + + D V+WN I A + +E + LF++ML+S +
Sbjct: 482 LNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNI 541
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
+P+ TF +LS CS + G I + + D + ++D++ + G +
Sbjct: 542 RPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVM 601
Query: 364 KFIQRMPLEPTASAWGALLGACRV--FKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVS 421
K + E W AL+ + + L K +P+ VS +IL +
Sbjct: 602 KVFEETR-EKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR----VSFISILTA 656
Query: 422 AK---LWSEASQIRILMKDRGI 440
+ + E + MKD G+
Sbjct: 657 CRHGGMVKEGMGLFQKMKDYGV 678
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 181/383 (47%), Gaps = 47/383 (12%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V++ N +I Y K + A +VFD + R+ VS+ ++ Y G + +F EM +
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLSVK 123
G PN TVS +L +C+ L D+ +G +HG ++++G+ + + FV + L+ +Y R ++
Sbjct: 109 FGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A VF+ MP + +WN +++ ++G
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMS--------------------------------LLG--- 191
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
G +E + R++ +MG E + +L S ++ L + K++HC + + ++S
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEIS 251
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+L+ Y KC + +++ +F D+V+WN +I A A N +AL LF +M G
Sbjct: 252 VVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG 311
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
PN T+ VL S +L+ G QI + ++ E + ++D +++ G L+++
Sbjct: 312 FSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNG-CETGIVLGNALIDFYAKCGNLEDS 370
Query: 363 ---YKFIQRMPLEPTASAWGALL 382
+ +I+ + W ALL
Sbjct: 371 RLCFDYIR----DKNIVCWNALL 389
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 176/413 (42%), Gaps = 69/413 (16%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+D F+ L+ YG+ +E A +VF+D+ + + +W + S + G ++ + F E+
Sbjct: 147 ADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFREL 206
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
G + +L S +KDL+ K +H A + G+ + V ++L+S Y +C +
Sbjct: 207 VRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNT 266
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
A +F D VSWN ++ A ++ K L LF M G ++ T+ +V+G
Sbjct: 267 HMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLG-- 324
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG--- 239
S+++ L G+++H G+ + G
Sbjct: 325 ---------------------------------VSSLVQLLSCGRQIH--GMLIKNGCET 349
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ AL+ YAKC +L SR FD + K++V WN ++ A + +G L LF ML
Sbjct: 350 GIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYA-NKDGPICLSLFLQML 408
Query: 300 RSGVKPNSVTFTGVLSGCS-------HSRLVDEGLQ----IFNSMGRDHLVEPDANHYSC 348
+ G +P TF+ L C HS +V G + + +S+ R + N
Sbjct: 409 QMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALL 468
Query: 349 MVD----------------VFSRAGRLDEAYKFIQRMPLEPTASAWGALLGAC 385
++D ++SR G+ E+ K I + +P +W + AC
Sbjct: 469 LLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 159/375 (42%), Gaps = 52/375 (13%)
Query: 74 VSSILPACSELKDLNSGKAIHGFAVR--HGMVENVFVCSALVSMYARCLSVKEARAVFDL 131
V S+L C + KA+H ++ +++ V+VC+ ++S+Y + V A VFD
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 132 MPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEES 191
MP R+ VS+N +I G + G +++
Sbjct: 75 MPERNKVSFN-----------------------------------TIIKGYSKYGDVDKA 99
Query: 192 LEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI--GDLSSTTALVY 249
+ +M+ G+ PN+ T+S +L S+ +R G ++H L++ + D T L+
Sbjct: 100 WGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLC 157
Query: 250 MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVT 309
+Y + L ++ VF+ MP K + WN M+ G KE + F ++R G +
Sbjct: 158 LYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESS 217
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
F GVL G S + +D Q+ S + L + + + + ++ + + G A + Q
Sbjct: 218 FLGVLKGVSCVKDLDISKQLHCSATKKGL-DCEISVVNSLISAYGKCGNTHMAERMFQDA 276
Query: 370 PLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPN-----NPGNYVSLFNILVSAKL 424
S W A++ A +N + A KLF P N G YVS+ + +L
Sbjct: 277 GSWDIVS-WNAIICATAKSEN----PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQL 331
Query: 425 WSEASQIRILMKDRG 439
S QI ++ G
Sbjct: 332 LSCGRQIHGMLIKNG 346
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 206/443 (46%), Gaps = 71/443 (16%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +D +S ++ Y KC +E ARRVFD +D+ SWTS S Y GL R+ +F
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 61 EM------GWNGV-------------------------KPNAVTVSSILPACSELKDLNS 89
M WN + + VT+ IL CS + D+
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 90 GKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH-RDAVSWNGVLTAYF 148
GK HGF RHG NV V +AL+ MY +C +++ A F M RD VS
Sbjct: 414 GKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS--------- 464
Query: 149 TNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
WNA++ G G++E++L MQ + KP++
Sbjct: 465 --------------------------WNALLTGVARVGRSEQALSFFEGMQ-VEAKPSKY 497
Query: 209 TISSILPACSILESLRMGKEVHCYGLR--HRIGDLSSTTALVYMYAKCSDLNLSRNVFDM 266
T++++L C+ + +L +GK +H + +R ++I D+ A+V MY+KC + + VF
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKI-DVVIRGAMVDMYSKCRCFDYAIEVFKE 556
Query: 267 MPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEG 326
+D++ WN++I +G KE LF + GVKP+ VTF G+L C V+ G
Sbjct: 557 AATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELG 616
Query: 327 LQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACR 386
Q F+SM + + P HY CM++++ + G L + +F+ MP +P + AC+
Sbjct: 617 FQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQ 676
Query: 387 VFKNVELAKIAAKKLFDIEPNNP 409
++ +L AAK+L + P
Sbjct: 677 RYRWSKLGAWAAKRLMNDHYLQP 699
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 210/421 (49%), Gaps = 13/421 (3%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
+ +V L +++ YGKC+ + ARRVFD++V VSW + Y+ G + + +F +
Sbjct: 194 SGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFK 253
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M V+P TVSS++ ACS L GK IH AV+ +V + V +++ MY +C
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
++ AR VFD +D SW ++ Y + + LF M + +WNA++GG
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI----VSWNAMLGG 369
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-D 240
+ + +E+L+ L M++ + +T+ IL CS + ++MGK+ H + RH +
Sbjct: 370 YVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPK-KDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ AL+ MY KC L + F M + +D V+WN ++ A G ++AL FE M
Sbjct: 430 VIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM- 488
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
+ KP+ T +L+GC++ ++ G I + RD + D MVD++S+
Sbjct: 489 QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY-KIDVVIRGAMVDMYSKCRCF 547
Query: 360 DEAYKFIQRMPLEPTASAWGALL-GACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
D A + + W +++ G CR ++ E+ ++ L + E P ++V+ I
Sbjct: 548 DYAIEVFKEAATRDLI-LWNSIIRGCCRNGRSKEVFELFM--LLENEGVKP-DHVTFLGI 603
Query: 419 L 419
L
Sbjct: 604 L 604
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 161/333 (48%), Gaps = 40/333 (12%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
+FL N I AYGKC C++ AR +F+++ RD SW ++ + G+ + +F M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
+GV+ + + +L +C + DL + +H V++G NV + +++V +Y +C + +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
AR VFD + + VSWN ++ Y +E
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRY-----------------------------------LE 240
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIGDLSS 243
G +E++ M KM ++ +P T+SS++ ACS +L +GK +H ++ + D
Sbjct: 241 MGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVV 300
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
+T++ MY KC L +R VFD KD+ +W + + AM G +EA LF+ M
Sbjct: 301 STSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLM----P 356
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRD 336
+ N V++ +L G H+ DE L M ++
Sbjct: 357 ERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 180/417 (43%), Gaps = 54/417 (12%)
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRD 136
+ +CS + + + V + +F+ + + Y +C V +AR +F+ MP RD
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 137 AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLR 196
SWN V+TA N ++ +F RM+R+GV+A
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRA-------------------------- 160
Query: 197 KMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCS 255
E + + +L +C ++ LR+ +++HC +++ G++ T++V +Y KC
Sbjct: 161 ---------TETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCR 211
Query: 256 DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLS 315
++ +R VFD + V+WN ++ G EA+++F ML V+P + T + V+
Sbjct: 212 VMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVML 271
Query: 316 GCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTA 375
CS S ++ G ++ +++ V D + + D++ + RL+ A + + +
Sbjct: 272 ACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLK 330
Query: 376 SAWGALLGACRVFKNVELAKIAAKKLFDIEPN-NPGNYVSLFNILVSAKLWSEASQIRIL 434
S A+ G E A++LFD+ P N ++ ++ V A W EA L
Sbjct: 331 SWTSAMSGYAMSGLTRE-----ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTL 385
Query: 435 MKDR-----------GITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
M+ + G S +Q+G + H F+ +T LD G+
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGK 442
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 115/350 (32%), Positives = 192/350 (54%), Gaps = 12/350 (3%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
+DV +I + K K +E AR+ FD + + VVSW ++ S Y G L +F++M
Sbjct: 196 NDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM 255
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
GV+PN T ++ ACS D + +++ + N FV +AL+ M+A+C +
Sbjct: 256 LRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 123 KEARAVF-DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
+ AR +F +L R+ V+WN +++ Y + LF M + V +WN++I G
Sbjct: 316 QSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAG 371
Query: 182 CMENGQTEESLEMLRKMQKMG-FKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
NGQ ++E M G KP+E+T+ S+L AC + L +G + Y +++I
Sbjct: 372 YAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKL 431
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
+ S +L++MYA+ +L ++ VFD M ++DVV++NT+ A A +G+G E L L M
Sbjct: 432 NDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK 491
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
G++P+ VT+T VL+ C+ + L+ EG +IF S+ P A+HY+CM
Sbjct: 492 DEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 176/411 (42%), Gaps = 75/411 (18%)
Query: 24 ARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSE 83
R +FD + +V S+ + + L ++ + G+ P+A + ++ +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 84 LKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFD------------- 130
G + G ++ +V + ++ MY + SV+ AR VFD
Sbjct: 119 F-----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 131 ------------------LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+MP D VSW ++T + K+ E F RM + V
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSV---- 229
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGK----- 227
+WNA++ G +NG TE++L + M ++G +PNE T ++ ACS + +
Sbjct: 230 VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKL 289
Query: 228 ------EVHCY------GLRHRIGDLSST----------------TALVYMYAKCSDLNL 259
++C+ + + D+ S A++ Y + D++
Sbjct: 290 IDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSS 349
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG-VKPNSVTFTGVLSGCS 318
+R +FD MPK++VV+WN++I A +G A+ FE+M+ G KP+ VT VLS C
Sbjct: 350 ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACG 409
Query: 319 HSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
H ++ G I + + ++ + D+ Y ++ +++R G L EA + M
Sbjct: 410 HMADLELGDCIVDYIRKNQIKLNDSG-YRSLIFMYARGGNLWEAKRVFDEM 459
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 198 bits (504), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 195/378 (51%), Gaps = 11/378 (2%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+T+D L LI + A VF+ L +W + PR+ L +F
Sbjct: 48 LTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFI 107
Query: 61 EMGW-NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
M + + + T ++ AC + G +HG A++ G +VF + L+ +Y +C
Sbjct: 108 LMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKC 167
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
R VFD MP R VSW +L +N + + +F++M V +W A+I
Sbjct: 168 GKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV----VSWTAMI 223
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
++N + +E+ ++ R+MQ KPNE TI ++L A + L SL MG+ VH Y H+ G
Sbjct: 224 TAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYA--HKNG 281
Query: 240 ---DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF- 295
D TAL+ MY+KC L +R VFD+M K + WN+MI + +HG G+EAL LF
Sbjct: 282 FVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFE 341
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
E + V+P+++TF GVLS C+++ V +GL+ F M + + + P H +CM+ + +
Sbjct: 342 EMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQ 401
Query: 356 AGRLDEAYKFIQRMPLEP 373
A +++A ++ M +P
Sbjct: 402 ALEVEKASNLVESMDSDP 419
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 15/317 (4%)
Query: 75 SSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH 134
S L CS L K IH ++H + + + L+S+ + + A VF+ +
Sbjct: 24 SYFLRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQS 80
Query: 135 RDAVSWNGVLTAYFTNKEYEKGLALFSRMS-REGVKADKATWNAVIGGCMENGQTEESLE 193
+WN ++ + N + + L LF M + DK T+ VI C+ + +
Sbjct: 81 PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQ 140
Query: 194 MLRKMQKMGFKPN---EITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYM 250
+ K GF + + T+ + C +S G++V + + S T ++Y
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDS---GRKVFD---KMPGRSIVSWTTMLYG 194
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTF 310
S L+ + VF+ MP ++VV+W MI A + EA LF M VKPN T
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
+L + + G + + ++ V D + ++D++S+ G L +A K M
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDYAHKNGFV-LDCFLGTALIDMYSKCGSLQDARKVFDVMQ 313
Query: 371 LEPTASAWGALLGACRV 387
+ A+ W +++ + V
Sbjct: 314 GKSLAT-WNSMITSLGV 329
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/377 (32%), Positives = 189/377 (50%), Gaps = 45/377 (11%)
Query: 87 LNSGKAIHGFAVRHGMV-ENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLT 145
L G+ +HG + G + E+ + + L+ YA+ ++ AR VFD MP R +V+WN ++
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 146 AYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ--KMGF 203
Y ++K DK NA +++ + R+ G
Sbjct: 187 GYCSHK-------------------DKGNHNA-----------RKAMVLFRRFSCCGSGV 216
Query: 204 KPNEITISSILPACSILESLRMGKEVHCY----GLRHRIGDLSSTTALVYMYAKCSDLNL 259
+P + T+ +L A S L +G VH Y G + D+ TALV MY+KC LN
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEV-DVFIGTALVDMYSKCGCLNN 275
Query: 260 SRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
+ +VF++M K+V W +M A++G G E L M SG+KPN +TFT +LS H
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRH 335
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWG 379
LV+EG+++F SM V P HY C+VD+ +AGR+ EAY+FI MP++P A
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLR 395
Query: 380 ALLGACRVFKNVELAKIAAKKLFDIEPNNPG-------NYVSLFNILVSAKLWSEASQIR 432
+L AC ++ + + K L +IE + +YV+L N+L W E ++R
Sbjct: 396 SLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLR 455
Query: 433 ILMKDRGITKTPGCSWL 449
MK+R I PG S++
Sbjct: 456 KEMKERRIKTRPGYSFV 472
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 42/266 (15%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGL-----PRQGLAIFH 60
+ L+H Y K + AR+VFD++ R V+W ++ Y + R+ + +F
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFR 207
Query: 61 EMG--WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVE--NVFVCSALVSMY 116
+GV+P T+ +L A S+ L G +HG+ + G +VF+ +ALV MY
Sbjct: 208 RFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
++C + A +VF+LM ++ +W + T N + L +RM+ G+K ++ T+
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFT 327
Query: 177 AVIGGCMENGQTEESLEMLRKMQK---------------------------------MGF 203
+++ G EE +E+ + M+ M
Sbjct: 328 SLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPI 387
Query: 204 KPNEITISSILPACSILESLRMGKEV 229
KP+ I + S+ ACSI MG+E+
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEI 413
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
DVF+ AL+ Y KC C+ A VF+ + ++V +WTS+++ G + + + M
Sbjct: 256 DVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMA 315
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+G+KPN +T +S+L A + + G + R G+ + +V + + +
Sbjct: 316 ESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRI 375
Query: 123 KEARAVFDLMPHR-DAV 138
+EA MP + DA+
Sbjct: 376 QEAYQFILAMPIKPDAI 392
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 122/448 (27%), Positives = 219/448 (48%), Gaps = 37/448 (8%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
D +A++ AY K I A ++F + D+ W + Y CG +G+ +F+ M
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G +PN T+ ++ + L ++H F ++ + + +V ALV+MY+RC+ +
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A +VF+ + D V+ + ++T Y SR
Sbjct: 260 SACSVFNSISEPDLVACSSLITGY-------------SRC-------------------- 286
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLS 242
G +E+L + +++ G KP+ + ++ +L +C+ L GKEVH Y +R + D+
Sbjct: 287 --GNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIK 344
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+AL+ MY+KC L + ++F +P+K++V++N++I+ +HG A F +L G
Sbjct: 345 VCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMG 404
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ P+ +TF+ +L C HS L+++G +IF M + +EP HY MV + AG+L+EA
Sbjct: 405 LIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEA 464
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNY-VSLFNILVS 421
++F+ + + GALL C V +N LA++ A+ + Y V L N+
Sbjct: 465 FEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYAR 524
Query: 422 AKLWSEASQIRILMKDRGITKTPGCSWL 449
W E ++R + + K PG SW
Sbjct: 525 YGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 122/211 (57%), Gaps = 9/211 (4%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ S ++ AL++ Y +C CI A VF+ + D+V+ +SL + Y CG ++ L +F
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
E+ +G KP+ V V+ +L +C+EL D SGK +H + +R G+ ++ VCSAL+ MY++C
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAY----FTNKEYEKGLALFSRMSREGVKADKATWN 176
+K A ++F +P ++ VS+N ++ F + +EK F+ + G+ D+ T++
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEK----FTEILEMGLIPDEITFS 413
Query: 177 AVIGGCMENGQTEESLEMLRKMQ-KMGFKPN 206
A++ C +G + E+ +M+ + G +P
Sbjct: 414 ALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 37/384 (9%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ D + + L Y + AR++FD R V W S+ Y L++F
Sbjct: 36 LARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFS 95
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
++ + +P+ T + + SE D + IHG A+ G+ + SA+V Y++
Sbjct: 96 QILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAG 155
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
+ EA +F +P D WN ++ Y ++KG+ LF+ M G + + T A+
Sbjct: 156 LIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS 215
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITIS-SILPACSILESLRMGKEVHCYGLRHRIG 239
G ++ P+ + ++ S+ C L++ + H Y +G
Sbjct: 216 GLID--------------------PSLLLVAWSVHAFC-----LKINLDSHSY-----VG 245
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
ALV MY++C + + +VF+ + + D+VA +++I + GN KEAL LF +
Sbjct: 246 -----CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR 300
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
SG KP+ V VL C+ G ++ + + R L E D S ++D++S+ G L
Sbjct: 301 MSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGL-ELDIKVCSALIDMYSKCGLL 359
Query: 360 DEAYKFIQRMPLEPTASAWGALLG 383
A +P + S +LG
Sbjct: 360 KCAMSLFAGIPEKNIVSFNSLILG 383
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 194/373 (52%), Gaps = 40/373 (10%)
Query: 6 FLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWN 65
F+ + LI Y KC + RRVF R+ +SWT+L S Y G Q L M
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQE 412
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
G +P+ VT++++LP C+EL+ + GK IH +A+++ + NV + ++L+ MY++C
Sbjct: 413 GFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKC------ 466
Query: 126 RAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
GV EY + LF R+ + VKA W A+I +EN
Sbjct: 467 ----------------GV-------PEYP--IRLFDRLEQRNVKA----WTAMIDCYVEN 497
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTT 245
+E+ R M +P+ +T+ +L CS L++L++GKE+H + L+ + +
Sbjct: 498 CDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS 557
Query: 246 A-LVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
A ++ MY KC DL + FD + K + W +I A + ++A+ FE M+ G
Sbjct: 558 ARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
PN+ TFT VLS CS + VDE + FN M R + ++P HYS ++++ +R GR++EA
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA-- 675
Query: 365 FIQRMPLEPTASA 377
QR+ + ++S+
Sbjct: 676 --QRLAVMSSSSS 686
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 181/386 (46%), Gaps = 40/386 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQG--LAI 58
+ S+ FL L+H Y C ++ A++VFD+ +V SW +L V G R L+
Sbjct: 142 LESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLST 201
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
F EM GV N ++S++ + + L G H A+++G+ +VF+ ++LV MY +
Sbjct: 202 FTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFK 261
Query: 119 CLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAV 178
C V AR VFD + RD V W ++ NK + L LF M
Sbjct: 262 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMI-------------- 307
Query: 179 IGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR- 237
+EE + PN + +++ILP +++L++GKEVH + L+ +
Sbjct: 308 ---------SEEKI-----------YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKN 347
Query: 238 -IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
+ + L+ +Y KC D+ R VF +++ ++W ++ A +G +AL
Sbjct: 348 YVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIV 407
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
M + G +P+ VT VL C+ R + +G +I + +L P+ + + ++ ++S+
Sbjct: 408 WMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI-HCYALKNLFLPNVSLVTSLMVMYSKC 466
Query: 357 GRLDEAYKFIQRMPLEPTASAWGALL 382
G + + R+ + AW A++
Sbjct: 467 GVPEYPIRLFDRLE-QRNVKAWTAMI 491
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 109/206 (52%), Gaps = 3/206 (1%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYV-NCGLPRQGLAIFHEM 62
+V L +L+ Y KC E R+FD L R+V +WT++ CYV NC L R G+ +F M
Sbjct: 452 NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDL-RAGIEVFRLM 510
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSV 122
+ +P++VT+ +L CS+LK L GK +HG ++ FV + ++ MY +C +
Sbjct: 511 LLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDL 570
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ A FD + + +++W ++ AY N+ + + F +M G + T+ AV+ C
Sbjct: 571 RSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSIC 630
Query: 183 MENGQTEESLEMLRKMQKM-GFKPNE 207
+ G +E+ M +M +P+E
Sbjct: 631 SQAGFVDEAYRFFNLMLRMYNLQPSE 656
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 151/334 (45%), Gaps = 44/334 (13%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
L I + G+ NA T S++L AC K L GK +H +G+ N F+ + LV
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVH 154
Query: 115 MYARCLSVKEARAVFDLMPHRDAVSWNGVL--TAYFTNKEYEKGLALFSRMSREGVKADK 172
MY C SVK+A+ VFD + SWN +L T K Y+ L+ F+
Sbjct: 155 MYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFT----------- 203
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
+M+++G N ++S++ + + +LR G + H
Sbjct: 204 ------------------------EMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHAL 239
Query: 233 GLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
+++ + + T+LV MY KC + L+R VFD + ++D+V W MI A + EA
Sbjct: 240 AIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEA 299
Query: 292 LLLFENML-RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM--GRDHLVEPDANHYSC 348
L LF M+ + PNSV T +L + + G ++ + ++++ +P +S
Sbjct: 300 LGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFV--HSG 357
Query: 349 MVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
++D++ + G + + + A +W AL+
Sbjct: 358 LIDLYCKCGDMASGRRVFYGSK-QRNAISWTALM 390
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST---- 244
E +L +L +++ G N T S++L AC +SL GK+VH + RI L S
Sbjct: 93 EVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVH---IRINGLESNEFLR 149
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGK--EALLLFENMLRSG 302
T LV+MY C + ++ VFD +V +WN ++ + G + + L F M G
Sbjct: 150 TKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
V N + + V + + + +GL+ ++ L + +VD++ + G++ A
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVDMYFKCGKVGLA 268
Query: 363 YKFIQRMPLEPTASAWGALLG 383
+ + +E WGA++
Sbjct: 269 RRVFDEI-VERDIVVWGAMIA 288
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 198/398 (49%), Gaps = 18/398 (4%)
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH-RIGD 240
C E G+ ++++E+++ + G+ + + I C ++L+ K VH + I D
Sbjct: 157 CRE-GKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISD 215
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+S+ +++ MY+ C + + VF+ MP++++ W +I A +G G++A+ F +
Sbjct: 216 ISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQ 275
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G KP+ F + C ++EGL F SM +++ + P HY +V + + G LD
Sbjct: 276 EGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLD 335
Query: 361 EAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILV 420
EA +F++ M EP W L+ RV ++ L + ++ S N
Sbjct: 336 EALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD-------ASRLNKES 386
Query: 421 SAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQ 480
A L S + K + + K P + GD S + ++Y L L +
Sbjct: 387 KAGLVPVKSSDLVKEKLQRMAKGPNYG-------IRYMAAGDISRPENRELYMALKSLKE 439
Query: 481 KMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGD 540
M GY P + L DVDQE K E+L NH+E+ A L+ +S IRV KNLR+C D
Sbjct: 440 HMIEIGYVPLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCAD 499
Query: 541 CHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
CHNA+K MS +VG +I RD+ RFHH K+G CSC++ W
Sbjct: 500 CHNALKLMSKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRD 136
I C + + L K +H F + ++ ++++ MY+ C SV++A VF+ MP R+
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 137 AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLR 196
+W GV+ + N + E + FSR +EG K D + + C G E L
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 197 KMQK 200
M K
Sbjct: 307 SMYK 310
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
SD+ N++I Y C +E A VF+ + R++ +W + C+ G + F
Sbjct: 214 SDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRF 273
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSG-KAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
G KP+ I AC L D+N G +G++ + +LV M A
Sbjct: 274 KQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGY 333
Query: 122 VKEA-RAVFDLMPHRD 136
+ EA R V + P+ D
Sbjct: 334 LDEALRFVESMEPNVD 349
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 219/455 (48%), Gaps = 39/455 (8%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
S++F++N L+ Y C + G+ R F+ + +DV+SW S+ S + G L +F +M
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLS 121
+ G +P+ S L CS D+ SGK IH + ++ G V ++ V SAL+ MY +C
Sbjct: 307 QFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNG 366
Query: 122 VKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
++ + ++ +P + N ++T+ + + +F M EG D
Sbjct: 367 IENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGID---------- 416
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL--ESLRMGKEVHCYGLRH-RI 238
E+T+S++L A S+ ESL VHC ++
Sbjct: 417 -------------------------EVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYA 451
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENM 298
D++ + +L+ Y K +SR VFD + ++ ++I A +G G + + + M
Sbjct: 452 ADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREM 511
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
R + P+ VT VLSGCSHS LV+EG IF+S+ + + P Y+CMVD+ RAG
Sbjct: 512 DRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGL 571
Query: 359 LDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNI 418
+++A + + + + AW +LL +CR+ +N + + AA+ L ++EP N Y+ +
Sbjct: 572 VEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKF 631
Query: 419 LVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGN 453
+ + QIR + R + + G S + V N
Sbjct: 632 YFEIGDFEISRQIREIAASRELMREIGYSSVVVKN 666
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 206/493 (41%), Gaps = 77/493 (15%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++F+ +AL+ Y + ++ A ++FD+++ R++ L C+ G ++ ++ M
Sbjct: 146 NMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME 205
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGM-VENVFVCSALVSMYARCLSV 122
GV N +T ++ CS + + GK +H V+ G + N+FV + LV Y+ C +
Sbjct: 206 LEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDL 265
Query: 123 KEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGC 182
+ F+ +P +D +SWN +++ C
Sbjct: 266 SGSMRSFNAVPEKDVISWNSIVSV-----------------------------------C 290
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR--HRIGD 240
+ G +SL++ KMQ G +P+ S L CS ++ GK++HCY L+ +
Sbjct: 291 ADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSS 350
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
L +AL+ MY KC+ + S ++ +P ++ N+++ + G K+ + +F M+
Sbjct: 351 LHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMID 410
Query: 301 SGVKPNSVTFTGVLSGCS-------------HSRLVDEG-----------LQIFNSMGR- 335
G + VT + VL S H + G + + G+
Sbjct: 411 EGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQN 470
Query: 336 -------DHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQ---RMPLEPTASAWGALLGAC 385
D L P+ + +++ ++R G + K ++ RM L P ++L C
Sbjct: 471 EVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC 530
Query: 386 RVFKNVELAKIAAKKLFDIEPNNPGN--YVSLFNILVSAKLWSEASQIRILMKDRGITKT 443
VE ++ L +PG Y + ++L A L +A R+L++ RG
Sbjct: 531 SHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAE--RLLLQARGDADC 588
Query: 444 PGCSWLQVGNRVH 456
S L R+H
Sbjct: 589 VAWSSLLQSCRIH 601
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 161/366 (43%), Gaps = 33/366 (9%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
V+ N I K + A FD++ RDVV++ L S G + + ++ EM
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G++ +A T S+L CS+ G +H + G N+FV SALV +YA V
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A +FD M R+ N +L + E ++ ++ RM EGV + T+ +I GC
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST 244
+ E ++ + K G+ + I ++++
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANV------------------------------- 254
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
LV Y+ C DL+ S F+ +P+KDV++WN+++ A +G+ ++L LF M G +
Sbjct: 255 --LVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKR 312
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P+ F L+ CS + + G QI + + + S ++D++ + ++ +
Sbjct: 313 PSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSAL 372
Query: 365 FIQRMP 370
Q +P
Sbjct: 373 LYQSLP 378
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 25/291 (8%)
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
D T+N +I G G + ++E+ +M G + + T S+L CS R G +VH
Sbjct: 76 DVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVH 135
Query: 231 CYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGK 289
C + G ++ +ALV +YA ++++ +FD M +++ N ++ G K
Sbjct: 136 CRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESK 195
Query: 290 EALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
++ M GV N +T+ ++ GCSH RLV EG Q+ + + + + + +
Sbjct: 196 RLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVL 255
Query: 350 VDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNP 409
VD +S G L + + +P E +W +++ C +
Sbjct: 256 VDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVCADY--------------------- 293
Query: 410 GNYVSLFNILVSAKLWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVV 460
G+ + ++ + W + IR M S +Q G ++H +V+
Sbjct: 294 GSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRN--SDIQSGKQIHCYVL 342
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 215/454 (47%), Gaps = 42/454 (9%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVK 68
N+++ Y + + A VF + RDVVSW L + G L F M ++
Sbjct: 173 NSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ 232
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+ TVS ++ CS+L++L+ GK ++ G + N V A + M+++C + ++ +
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKL 292
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
F R+ W+ VL N++IG +
Sbjct: 293 F-----RELEKWDSVLC------------------------------NSMIGSYSWHCCG 317
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG---DLSSTT 245
E++L + +P++ T SS+L + + + L G +VH L ++G D + T
Sbjct: 318 EDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVH--SLVIKLGFDLDTAVAT 374
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML-RSGVK 304
+L+ MY K ++L+ VF KD++ WNT+I+ A + E+L +F +L +K
Sbjct: 375 SLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLK 434
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
P+ VT G+L C ++ V+EG+QIF+SM + H V P HY+C++++ R G ++EA
Sbjct: 435 PDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKD 494
Query: 365 FIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKL 424
++P EP++ W +L A + LA+ AK + + EP + Y+ L I
Sbjct: 495 IADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWR 554
Query: 425 WSEASQIRILMKDRGITKTPGCSWLQVGNRVHTF 458
W + ++R M + + G S + + + V +F
Sbjct: 555 WENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 142/308 (46%), Gaps = 20/308 (6%)
Query: 69 PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAV 128
P+++ S ++ K K +H + G V + + + +Y + SV A +
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 129 FDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
FD +P ++ ++WN L F N L LF M D +WN +I G + G
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPER----DVVSWNTMISGLVSCGFH 117
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH----CYGLRHRIGDLSST 244
E + + MQ+ +P E T S + S++ +R G+++H C G+ +L
Sbjct: 118 EYGIRVFFDMQRWEIRPTEFTFSIL---ASLVTCVRHGEQIHGNAICSGVSRY--NLVVW 172
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
+++ MY + + + +VF M +DVV+WN +I++ + GN + AL F M ++
Sbjct: 173 NSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQ 232
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFN---SMGRDHLVEPDANHYSCMVDVFSRAGRLDE 361
P+ T + V+S CS R + +G Q MG ++ +D+FS+ RLD+
Sbjct: 233 PDEYTVSMVVSICSDLRELSKGKQALALCIKMG----FLSNSIVLGAGIDMFSKCNRLDD 288
Query: 362 AYKFIQRM 369
+ K + +
Sbjct: 289 SVKLFREL 296
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 257 LNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
LN + ++FD MP++DVV+WNTMI G + + +F +M R ++P TF+ + S
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 317 CSHSRLVDE--GLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPT 374
+ R ++ G I + + R +LV ++ ++D++ R G D A M
Sbjct: 146 VTCVRHGEQIHGNAICSGVSRYNLVV-----WNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 375 ASAWGALLGACRVFKNVELA--KIAAKKLFDIEPN 407
S W L+ +C N E+A + + +I+P+
Sbjct: 201 VS-WNCLILSCSDSGNKEVALDQFWLMREMEIQPD 234
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 201/392 (51%), Gaps = 48/392 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMG 63
++ + ++L++ Y +C + A R FD + +DV+SWT++ S G + + +F M
Sbjct: 217 NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML 276
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+ PN TV SIL ACSE K L G+ +H V+ + +VFV ++L+ MYA+C +
Sbjct: 277 NHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
+ R VFD M +R+ V+W ++ A+ +REG
Sbjct: 337 DCRKVFDGMSNRNTVTWTSIIAAH----------------AREGFG-------------- 366
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
EE++ + R M++ N +T+ SIL AC + +L +GKE+H +++ I ++
Sbjct: 367 -----EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVY 421
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
+ LV++Y KC + + NV +P +DVV+W MI + G+ EAL + M++ G
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEG 481
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY--SCMVDVFSRAGRLD 360
V+PN T++ L C++S + G I + ++H + +N + S ++ ++++ G +
Sbjct: 482 VEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHAL---SNVFVGSALIHMYAKCGFVS 538
Query: 361 EAYKFIQRMPLEPTASAWGALL------GACR 386
EA++ MP E +W A++ G CR
Sbjct: 539 EAFRVFDSMP-EKNLVSWKAMIMGYARNGFCR 569
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 197/414 (47%), Gaps = 43/414 (10%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
++ N LI + + + AR+VFD + ++ V+WT++ Y+ GL + A+F +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVK 176
Query: 65 NGVK-PNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+G++ N +L CS + G+ +HG V+ G V N+ V S+LV YA+C +
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELT 235
Query: 124 EARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCM 183
A FD+M +D +SW AVI C
Sbjct: 236 SALRAFDMMEEKDVISW-----------------------------------TAVISACS 260
Query: 184 ENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLS 242
G +++ M M F PNE T+ SIL ACS ++LR G++VH ++ I D+
Sbjct: 261 RKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF 320
Query: 243 STTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSG 302
T+L+ MYAKC +++ R VFD M ++ V W ++I A+A G G+EA+ LF M R
Sbjct: 321 VGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRH 380
Query: 303 VKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ N++T +L C + G ++ + ++ +E + S +V ++ + G +A
Sbjct: 381 LIANNLTVVSILRACGSVGALLLGKELHAQIIKNS-IEKNVYIGSTLVWLYCKCGESRDA 439
Query: 363 YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFD--IEPNNPGNYVS 414
+ +Q++P S W A++ C + A K++ +EP NP Y S
Sbjct: 440 FNVLQQLPSRDVVS-WTAMISGCSSLGHESEALDFLKEMIQEGVEP-NPFTYSS 491
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 163/329 (49%), Gaps = 37/329 (11%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+ +DVF+ +L+ Y KC I R+VFD + R+ V+WTS+ + + G + +++F
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
M + N +TV SIL AC + L GK +H +++ + +NV++ S LV +Y +C
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCG 434
Query: 121 SVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
++A V +P RD VSW +++ + + L M +EGV
Sbjct: 435 ESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGV------------ 482
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR-HRIG 239
+PN T SS L AC+ ESL +G+ +H + H +
Sbjct: 483 -----------------------EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS 519
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENML 299
++ +AL++MYAKC ++ + VFD MP+K++V+W MI+ A +G +EAL L M
Sbjct: 520 NVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRME 579
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
G + + F +LS C L DE ++
Sbjct: 580 AEGFEVDDYIFATILSTCGDIEL-DEAVE 607
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 38/295 (12%)
Query: 91 KAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN 150
K IH A++ + ++ + L+S R + AR VFD MP ++ V
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTV------------ 149
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFK-PNEIT 209
TW A+I G ++ G +E+ + K G + NE
Sbjct: 150 -----------------------TWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERM 186
Query: 210 ISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
+L CS +G++VH ++ +G+L ++LVY YA+C +L + FDMM +
Sbjct: 187 FVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEE 246
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
KDV++W +I A + G+G +A+ +F ML PN T +L CS + + G Q+
Sbjct: 247 KDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV 306
Query: 330 FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALLGA 384
+S+ +++ D + ++D++++ G + + K M T + W +++ A
Sbjct: 307 -HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT-WTSIIAA 359
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 193/395 (48%), Gaps = 17/395 (4%)
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH-CYGLRHRIGDLSS 243
G E++E+L ++ G+ + I + + C E+L + VH C D+ +
Sbjct: 97 QGNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGA 156
Query: 244 TTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
A++ MY+ C ++ + VF+ MP+ + M+ +G G+EA+ LF G
Sbjct: 157 RNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGN 216
Query: 304 KPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAY 363
KPN F V S C+ + V EG F +M R++ + P HY + + + +G LDEA
Sbjct: 217 KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEAL 276
Query: 364 KFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAK 423
F++RMP+EP+ W L+ RV +VEL A+ + ++ + + + SA
Sbjct: 277 NFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD-------ATRLDKVSSAG 329
Query: 424 LWSEASQIRILMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMK 483
L A++ +K T++ + TF D S+ + IYE L L ++K
Sbjct: 330 L--VATKASDFVKKEPSTRSEPYFY-------STFRPVDSSHPQMNIIYETLMSLRSQLK 380
Query: 484 LAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRICGDCHN 543
GY PDT Y + E E + + E++AV +L +S+I + N+RI GDCH+
Sbjct: 381 EMGYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHD 440
Query: 544 AIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
+K MS + G +I RD+ +H FKNG C C +LW
Sbjct: 441 MMKLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 71/155 (45%), Gaps = 1/155 (0%)
Query: 53 RQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSAL 112
R+ + + + G + + + + C + + L + + +H + +V +A+
Sbjct: 101 REAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAI 160
Query: 113 VSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ MY+ C SV +A VF+ MP ++ + ++ + N E+ + LF+R EG K +
Sbjct: 161 IEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNG 220
Query: 173 ATWNAVIGGCMENGQTEE-SLEMLRKMQKMGFKPN 206
+N V C G +E SL+ ++ G P+
Sbjct: 221 EIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPS 255
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 188/400 (47%), Gaps = 30/400 (7%)
Query: 187 QTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH-CYGLRHRIGDLSSTT 245
+ E+LE++ ++ G+ + + + C +E+L + VH C D S
Sbjct: 92 KIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPL----DARSYH 147
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
++ MY+ C + + NVF+ MPK++ W TMI A +G G+ A+ +F + G KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ F V C ++EGL F SM RD+ + Y ++++ + G LDEA F
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 366 IQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLW 425
++RM +EP+ W L+ C V +EL + L L ++++
Sbjct: 268 VERMTVEPSVEMWETLMNLCWVQGYLELG---------------DRFAELIKKLDASRMS 312
Query: 426 SEASQIRILMK--DRGITKTPGCSWLQV-----GNRVHTFVVGDRSNTGSDKIYEFLDEL 478
E++ + K D + K + Q+ R+H F GD S+ G+ + L
Sbjct: 313 KESNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKRMHEFRAGDTSHLGTVSAFR---SL 369
Query: 479 GQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSIRVFKNLRIC 538
+M G+ P T V++EEK E L S KLA A I+N + + V +N+R C
Sbjct: 370 KVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQNMRTC 429
Query: 539 GDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
D HN K +S + G +I RD ++H +KNG CSC+D W
Sbjct: 430 IDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 4/115 (3%)
Query: 111 ALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
++ MY+ C S +A VF+ MP R++ +W ++ N E E+ + +F+R EG K
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 171 DKATWNAVIGGCMENGQTEESL----EMLRKMQKMGFKPNEITISSILPACSILE 221
DK + AV C+ G E L M R + + + + +L AC L+
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLD 262
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%)
Query: 470 KIYEFLDELGQKMKLAGYKPDTDYVLQDVDQEEKAESLCNHSEKLAVAFGILNLNGQSSI 529
K Y L LG++++ AGY P+T YVL D+D+E K ++L +HSE+LA+AFGI+N ++I
Sbjct: 131 KAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGTTI 190
Query: 530 RVFKNLRICGDCHNAIKYMSNVVGVTIIVRDSLRFHHFKNGNCSCQDLW 578
RV KNLRICGDCHN IK +S++ IIVRD+ RFHHF++GNCSC D W
Sbjct: 191 RVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 197/394 (50%), Gaps = 25/394 (6%)
Query: 7 LSNALIHAYGKCKCIEGARRVFDDLV----GRDVVSWTSLSSCYVNCGLPRQGLAIFHEM 62
L++A+I G+ + A+R+F+ G V ++++L S Y GL + +++F+ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 63 GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGF---AVRHGMVENVFVCSALVSMYARC 119
G++PN VT ++++ AC K K + F R+G+ + ++L+++ +R
Sbjct: 295 KEYGLRPNLVTYNAVIDACG--KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+ AR +FD M +R D S+N +L A + + + ++M + + + ++
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL----ESLRMGKEVHC 231
+ VI G + G+ +E+L + +M+ +G + ++ +++L + + E+L + +E+
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDV----VAWNTMIIANAMHGN 287
G++ D+ + AL+ Y K + + VF M ++ V + ++T+I + G
Sbjct: 473 VGIKK---DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 288 GKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYS 347
KEA+ +F +G++ + V ++ ++ + LV + + + M ++ + P+ Y+
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG-ISPNVVTYN 588
Query: 348 CMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGAL 381
++D F R+ +D + + L ++SA AL
Sbjct: 589 SIIDAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 195/448 (43%), Gaps = 59/448 (13%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLP-RQGLAIF 59
V+ +ALI AYG+ E A VF+ + + ++V++ ++ G+ +Q F
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM NGV+P+ +T +S+L CS + + + + ++VF + L+ +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+ A + MP + + VS++ V+ + +++ L LF M G+ D+ ++
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N ++ + G++EE+L++LR+M +G K + +T +++L K+V R
Sbjct: 448 NTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKR 507
Query: 236 -HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKE 290
H + +L + + L+ Y+K + +F + DVV ++ +I A +G
Sbjct: 508 EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGS 567
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDE-------GLQIFNSMGRDHLVEPDA 343
A+ L + M + G+ PN VT+ ++ S +D G F+S L E +
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEG 627
Query: 344 N--------------------------HYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASA 377
N SC+++VF + + ++ ++P
Sbjct: 628 NRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK----------MHQLEIKPNVVT 677
Query: 378 WGALLGACRVFKNVELAKIAAK--KLFD 403
+ A+L AC + E A + + +LFD
Sbjct: 678 FSAILNACSRCNSFEDASMLLEELRLFD 705
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 29/249 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV NAL+ YGK + ++VF ++ V +++++++L Y GL ++ + IF
Sbjct: 478 DVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
E G++ + V S+++ A + + S ++ + G+ NV ++++ + R
Sbjct: 538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRS 597
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
++ + + ++ ++ + T E + + LF +++ E + N
Sbjct: 598 ATMDRSADY----SNGGSLPFSSSALSALTETEGNRVIQLFGQLTTE-------SNNRTT 646
Query: 180 GGCMENGQTEES--LEMLRKMQKMGFKPNEITISSILPACS----------ILESLRMGK 227
C E G E S LE+ RKM ++ KPN +T S+IL ACS +LE LR+
Sbjct: 647 KDC-EEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELRLFD 705
Query: 228 EVHCYGLRH 236
YG+ H
Sbjct: 706 N-KVYGVVH 713
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 158/326 (48%), Gaps = 16/326 (4%)
Query: 56 LAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSM 115
+++ +M G+ N T S ++ L A+ G ++ G N+ S+L++
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 116 YARCLSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
Y + EA A+ D M + V++N ++ F + + + +AL RM +G + D
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC----SILESLRMGK 227
T+ V+ G + G T+ + +L KM++ +P + ++I+ + ++L + K
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFK 280
Query: 228 EVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK---DVVAWNTMIIANAM 284
E+ G+R + SS + + Y + SD SR + DM+ +K DV ++ +I A
Sbjct: 281 EMETKGIRPNVVTYSSLISCLCNYGRWSD--ASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIFNSMGRDHLVEPDA 343
G EA L++ M++ + P+ VT++ +++G C H RL DE Q+F M H PD
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL-DEAKQMFEFMVSKHCF-PDV 396
Query: 344 NHYSCMVDVFSRAGRLDEAYKFIQRM 369
Y+ ++ F + R++E + + M
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREM 422
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 148/316 (46%), Gaps = 13/316 (4%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
V + N +I K K ++ A +F ++ + +VV+++SL SC N G +
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M + P+ T S+++ A + L + ++ V+ + ++ S+L++ +
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHD 375
Query: 121 SVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+ EA+ +F+ M + D V++N ++ + K E+G+ +F MS+ G+ + T+N
Sbjct: 376 RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYN 435
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
+I G + G + + E+ ++M G PN +T +++L L V Y R
Sbjct: 436 ILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 495
Query: 237 RI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEA 291
++ + + ++ K + ++F + K DVVA+NTMI G+ +EA
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 292 LLLFENMLRSGVKPNS 307
LF+ M G PNS
Sbjct: 556 DALFKEMKEDGTLPNS 571
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/337 (20%), Positives = 145/337 (43%), Gaps = 38/337 (11%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
L +F EM G++PN VT SS++ + + + + +VF SAL+
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 115 MYARCLSVKEARAVFDLMPHRDA----VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+ + + EA ++D M R V+++ ++ + + ++ +F M +
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
D T+N +I G + + EE +E+ R+M + G N +T + ++ M +E+
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI- 453
Query: 231 CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
V D +P +++ +NT++ +G ++
Sbjct: 454 ----------------------------FKEMVSDGVPP-NIMTYNTLLDGLCKNGKLEK 484
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
A+++FE + RS ++P T+ ++ G + V++G +F ++ V+PD Y+ M+
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMI 543
Query: 351 DVFSRAGRLDEAYKFIQRMPLE---PTASAWGALLGA 384
F R G +EA + M + P + + L+ A
Sbjct: 544 SGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 51/315 (16%)
Query: 120 LSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
L + +A A+F M P + ++ +L+A +++ ++L +M G+ + T+
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTY 119
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL--------------------- 214
+ +I Q +L +L KM K+G++PN +T+SS+L
Sbjct: 120 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV 179
Query: 215 ----PACSILESLRMGKEVH-----CYGLRHRI------GDLSSTTALVYMYAKCSDLNL 259
P +L G +H L R+ DL + +V K D +L
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 260 SRNVFDMMPK----KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLS 315
+ N+ + M + V+ +NT+I + + +AL LF+ M G++PN VT++ ++S
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 316 G-CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PL 371
C++ R D + + + R + PD +S ++D F + G+L EA K M +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERK--INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 372 EPTASAWGALL-GAC 385
+P+ + +L+ G C
Sbjct: 358 DPSIVTYSSLINGFC 372
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 102/216 (47%), Gaps = 8/216 (3%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
++LI+ + ++ A+++F+ +V + DVV++ +L + +G+ +F EM
Sbjct: 365 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+ N VT + ++ + D + + I V G+ N+ + L+ + +++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 125 ARAVFDLMPHRDA----VSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
A VF+ + ++N ++ + E G LF +S +GVK D +N +I
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPA 216
G G EE+ + ++M++ G PN ++++ A
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 168/377 (44%), Gaps = 39/377 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ +DV + +I A K + A +F ++ + +VV++ SL C N G
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + PN VT S+++ A + L + ++ ++ + ++F S+L++ +
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
Query: 117 ARCLSVKEARAVFDLMPHRD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ EA+ +F+LM +D V++N ++ + K E+G+ LF MS+ G+ +
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+N +I G + G + + ++ +KM G P+ IT S +L
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC-------------- 476
Query: 233 GLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
+ G L +V+ Y + S + + D+ +N MI G ++
Sbjct: 477 ----KYGKLEKAL-VVFEYLQKSKM-----------EPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
LF ++ GVKPN + +T ++SG L +E +F M D + P++ Y+ ++
Sbjct: 521 DLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRA 579
Query: 353 FSRAGRLDEAYKFIQRM 369
R G + + I+ M
Sbjct: 580 RLRDGDKAASAELIKEM 596
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 146/291 (50%), Gaps = 18/291 (6%)
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM----PHRDAVSWNGVLTAY 147
A+ G ++ G ++ S+L++ Y + EA A+ D M + V++N ++
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 148 FTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNE 207
F + + + +AL RM G + D T+ V+ G + G + +L +L+KM+K + +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 208 ITISSILPAC----SILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNV 263
+ ++I+ A ++ ++L + E+ G+R + +S + Y + SD SR +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD--ASRLL 313
Query: 264 FDMMPKK---DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSH 319
DM+ +K +VV ++ +I A G EA L++ M++ + P+ T++ +++G C H
Sbjct: 314 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 320 SRLVDEGLQIFNSM-GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
RL DE +F M +D P+ Y+ ++ F +A R++E + + M
Sbjct: 374 DRL-DEAKHMFELMISKDCF--PNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/439 (20%), Positives = 190/439 (43%), Gaps = 55/439 (12%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
D+V+ +SL + Y + + +A+ +M +PN VT ++++ + A+
Sbjct: 149 DIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALI 208
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP----HRDAVSWNGVLTAYFTN 150
V G ++F +V+ + + A ++ M D V + ++ A
Sbjct: 209 DRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNY 268
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
K L LF+ M +G++ + T+N++I G+ ++ +L M + PN +T
Sbjct: 269 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 328
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
S+++ A L ++++ ++ I D+ + ++L+ + L+ ++++F++M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388
Query: 270 KD----VVAWNTMI------------------------IANAMH-----------GNGKE 290
KD VV +NT+I + N + G+
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
A +F+ M+ GV P+ +T++ +L G C + +L ++ L +F + + + EPD Y+ M
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL-EKALVVFEYLQKSKM-EPDIYTYNIM 506
Query: 350 VDVFSRAGRLDEAYKFIQRMPL---EPTASAWGALL-GACRVFKNVELAKIAAKKLFDIE 405
++ +AG++++ + + L +P + ++ G CR E + + D
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Query: 406 PNNPGNYVSLFNILVSAKL 424
N G Y N L+ A+L
Sbjct: 567 LPNSGTY----NTLIRARL 581
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 150/358 (41%), Gaps = 55/358 (15%)
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P V +N +L+A +++ ++L RM + D ++N +I Q +L
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 193 EMLRKMQKMGFKPNEITISSIL-------------------------PACSILESLRMGK 227
+L KM K+G++P+ +T+SS+L P +L G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 228 EVH-----CYGLRHRI------GDLSSTTALVYMYAKCSDLNLSRNVFDMMPK----KDV 272
+H L R+ DL + +V K D++L+ ++ M K DV
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIFN 331
V + T+I A + N +AL LF M G++PN VT+ ++ C++ R D + +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRVF 388
+ R + P+ +S ++D F + G+L EA K M ++P + +L+ +
Sbjct: 316 MIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 373
Query: 389 KNVELAKIAAKKLFDIEPN-----NPGNYVSLFNILVSAKLWSEASQIRILMKDRGIT 441
++ AK +F++ + N Y +L AK E ++ M RG+
Sbjct: 374 DRLD----EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 160/317 (50%), Gaps = 18/317 (5%)
Query: 66 GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
GV N T + ++ L+ AI G ++ G ++ ++L++ + + EA
Sbjct: 95 GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154
Query: 126 RAVFDLMP----HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
A+ D M D V++ ++ F + + + +AL RM +G + D T+ AVI G
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC----SILESLRMGKEVHCYGLRHR 237
+ G+ + +L +L KM+K + + + S+++ + + ++L + E+ G+R
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPD 274
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK---DVVAWNTMIIANAMHGNGKEALLL 294
+ SS + + Y + SD SR + DM+ +K +VV +N++I A A G EA L
Sbjct: 275 VFTYSSLISCLCNYGRWSD--ASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 295 FENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIFNSM-GRDHLVEPDANHYSCMVDV 352
F+ M++ + PN VT+ +++G C H RL DE QIF M +D L PD Y+ +++
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRL-DEAQQIFTLMVSKDCL--PDVVTYNTLING 389
Query: 353 FSRAGRLDEAYKFIQRM 369
F +A ++ + + + M
Sbjct: 390 FCKAKKVVDGMELFRDM 406
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 172/378 (45%), Gaps = 19/378 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ +DV + + +I + K + ++ A +F ++ + DV +++SL SC N G
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + PN VT +S++ A ++ L + + ++ + N+ ++L++ +
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 117 ARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ EA+ +F LM + D V++N ++ + K+ G+ LF MSR G+ +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+ +I G + + + + ++M G PN +T +++L L V Y
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 233 GLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGN 287
+ ++ D+ + + K + ++F + K DV+A+NTMI G
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 288 GKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEG--LQIFNSMGRDHLVEPDANH 345
+EA LF M G P+S T+ ++ +H R D+ ++ M R DA+
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIR--AHLRDGDKAASAELIKEM-RSCRFAGDAST 592
Query: 346 YSCMVDVFSRAGRLDEAY 363
Y + D+ GRLD+ +
Sbjct: 593 YGLVTDML-HDGRLDKGF 609
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 156/362 (43%), Gaps = 48/362 (13%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
DVV ++++ L +F EM G++P+ T SS++ + +
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTN 150
+ + NV ++L+ +A+ + EA +FD M R + V++N ++ + +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
++ +F+ M + D T+N +I G + + + +E+ R M + G N +T
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
T L++ + + SD + ++ VF M
Sbjct: 419 ----------------------------------TTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 271 ----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEG 326
+++ +NT++ +G ++A+++FE + +S ++P+ T+ + G + V++G
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 327 LQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM----PLEPTASAWGALL 382
+F S+ V+PD Y+ M+ F + G +EAY +M PL P + + L+
Sbjct: 505 WDLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLI 562
Query: 383 GA 384
A
Sbjct: 563 RA 564
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 142/360 (39%), Gaps = 76/360 (21%)
Query: 120 LSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
L + EA +F M P V ++ +L+A K+++ ++ +M GV + T+
Sbjct: 44 LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N +I Q +L +L KM K+G+ P+ +T++S+L C+G R
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNG-------------FCHGNR 150
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+S ALV + +M + D V + T++ H EA+ L
Sbjct: 151 -----ISEAVALV------------DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
E M+ G +P+ VT+ V++G D L + N M + +E D YS ++D +
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK-IEADVVIYSTVIDSLCK 252
Query: 356 AGRLDEAYKFIQRMP---LEPTASAWGALLG----------ACRVFKNV----------- 391
+D+A M + P + +L+ A R+ ++
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 392 ----------ELAKIAAKKLFD------IEPNNPGNYVSLFNILVSAKLWSEASQIRILM 435
E I A+KLFD I+PN Y SL N EA QI LM
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV-TYNSLINGFCMHDRLDEAQQIFTLM 371
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 162/377 (42%), Gaps = 39/377 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ +DV + N +I + K + ++ A +F ++ + +VV+++SL SC + G
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + PN VT ++++ A + + +H ++ + ++F ++L++ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 117 ARCLSVKEARAVFDLMPHRDAV----SWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ +A+ +F+ M +D ++N ++ + +K E G LF MS G+ D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+ +I G +G + + ++ ++M G P+ +T S +L L EV Y
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 233 GLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
+ I K D+ + TMI G +
Sbjct: 421 MQKSEI------------------------------KLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
LF ++ GVKPN VT+ ++SG RL+ E + M D + PD+ Y+ ++
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRA 509
Query: 353 FSRAGRLDEAYKFIQRM 369
R G + + I+ M
Sbjct: 510 HLRDGDKAASAELIREM 526
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 168/398 (42%), Gaps = 18/398 (4%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+F N L+ A K K + + + + + ++ ++ L +C+ LA+
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M G +P+ VT+SS+L K ++ A+ V G + + L+
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 121 SVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
EA A+ D M R + V++ V+ + + L ++M ++AD +N
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
+I + +++L + ++M+ G +PN +T SS++ ++ +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 237 RIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEA 291
+I +L + AL+ + K + + D M K+ D+ +N++I MH +A
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 309
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
+FE M+ P+ T+ ++ G S+ V++G ++F M LV D Y+ ++
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-GDTVTYTTLIQ 368
Query: 352 VFSRAGRLDEAYKFIQRMP---LEPTASAWGALL-GAC 385
G D A K ++M + P + LL G C
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 128/308 (41%), Gaps = 62/308 (20%)
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P +N +L+A K+++ ++L +M R G+ + T+N +I Q +L
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
+L KM K+G++P+ +T+SS+L +C+G R +S ALV
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNG-------------YCHGKR-----ISDAVALV---- 103
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ +M + D + + T+I +H EA+ L + M++ G +PN VT+
Sbjct: 104 --------DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 155
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE 372
V++G +D + N M +E D ++ ++D + +D+A + M +
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
Query: 373 PTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIR 432
I PN Y SL + L S WS+ASQ+
Sbjct: 215 G------------------------------IRPN-VVTYSSLISCLCSYGRWSDASQLL 243
Query: 433 ILMKDRGI 440
M ++ I
Sbjct: 244 SDMIEKKI 251
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 139/297 (46%), Gaps = 20/297 (6%)
Query: 105 NVFVCSALVSMYARCLSVKEARAVFDLMPH----RDAVSWNGVLTAYFTNKEYEKGLALF 160
N + + ++S+ R + + VFD MP R S+ ++ AY N YE L L
Sbjct: 140 NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELL 199
Query: 161 SRMSREGVKADKATWNAVIGGCMENGQTEES-LEMLRKMQKMGFKPNEITISSILPACSI 219
RM E + T+N VI C G E L + +M+ G +P+ +T +++L AC+I
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAI 259
Query: 220 L----ESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK----KD 271
E+ + + ++ G+ + DL++ + LV + K L ++ M D
Sbjct: 260 RGLGDEAEMVFRTMNDGGI---VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
+ ++N ++ A A G+ KEA+ +F M +G PN+ T++ +L+ S D+ Q+F
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGAC 385
M + +PDA Y+ +++VF G E M +EP + ++ AC
Sbjct: 377 EMKSSN-TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/456 (21%), Positives = 187/456 (41%), Gaps = 91/456 (19%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
++ VF ALI+AYG+ E + + D + + ++++ ++ + GL +GL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 57 -AIFHEMGWNGVKPNAVTVSSILPACS----------ELKDLNSGKAIHGFAVRHGMVE- 104
+F EM G++P+ VT +++L AC+ + +N G + +VE
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVET 291
Query: 105 ------------------------NVFVCSALVSMYARCLSVKEARAVFDLM------PH 134
++ + L+ YA+ S+KEA VF M P+
Sbjct: 292 FGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN 351
Query: 135 R---------------------------------DAVSWNGVLTAYFTNKEYEKGLALFS 161
DA ++N ++ + +++ + LF
Sbjct: 352 ANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 162 RMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE 221
M E ++ D T+ +I C + G E++ ++L+ M P+ + ++ A +
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG--Q 469
Query: 222 SLRMGKEVHCYGLRHRIG---DLSSTTALVYMYA-----KCSDLNLSRNVFDMMPKKDVV 273
+ + + + H +G + + +L+Y +A K S+ LSR V +P ++
Sbjct: 470 AALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP-RNRD 528
Query: 274 AWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
+N I A G +EA+ + +M +S P+ T VLS S +RLVDE + F M
Sbjct: 529 TFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM 588
Query: 334 GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
++ P Y M+ V+ + R D+ + ++ M
Sbjct: 589 KASDIL-PSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 163/377 (43%), Gaps = 49/377 (12%)
Query: 19 KCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTV 74
KC+E VFD++ V R V S+T+L + Y G L + M + P+ +T
Sbjct: 159 KCLE----VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTY 214
Query: 75 SSILPACSELKDLNSGKAIHGFA-VRH-GMVENVFVCSALVSMYARCLSVKEARAVFDLM 132
++++ AC+ L+ + FA +RH G+ ++ + L+S A EA VF M
Sbjct: 215 NTVINACAR-GGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 133 PH----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
D +++ ++ + + EK L M+ G D ++N ++ ++G
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALV 248
+E++ + +MQ G PN T S +L + +G R D+ +
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLL---------------NLFGQSGRYDDVRQ----L 374
Query: 249 YMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSV 308
++ K S+ + D +N +I G KE + LF +M+ ++P+
Sbjct: 375 FLEMKSSNTD-----------PDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDE---AYKF 365
T+ G++ C L ++ +I M + +V P + Y+ +++ F +A +E A+
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIV-PSSKAYTGVIEAFGQAALYEEALVAFNT 482
Query: 366 IQRMPLEPTASAWGALL 382
+ + P+ + +LL
Sbjct: 483 MHEVGSNPSIETFHSLL 499
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 179/415 (43%), Gaps = 54/415 (13%)
Query: 20 CIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILP 79
C+E RR+ D V V S T + G + + E G+KP A T ++I+
Sbjct: 208 CLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIIN 267
Query: 80 ACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR---- 135
A + +D + + + + G+V N + L+ + + + +A +FD M R
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIES 327
Query: 136 ------DAVSWN---GVLTAYFT--NKEYEKGLA------------------------LF 160
+SWN G + F ++ EKGL+ L
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILM 387
Query: 161 SRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL 220
+ M +GV + +N +I G G +E+ + M++ GF+ + T ++I S
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI---ASCF 444
Query: 221 ESLRMGKEVHCYGLRHRIGDLS----STTALVYMYAKCSDLNLSRNVFDMMPKKDV---- 272
L+ E + R G + S T L+ +Y K ++ ++ +F M K V
Sbjct: 445 NRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNA 504
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNS 332
+ +N MI A G KEA L NM +G+ P+S T+T ++ G + VDE +++F+
Sbjct: 505 ITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSE 564
Query: 333 MGRDHLVEPDANHYSCMVDVFSRAGRLDEA---YKFIQRMPLEPTASAWGALLGA 384
MG L + ++ Y+ M+ S+AG+ DEA Y ++R + AL+G+
Sbjct: 565 MGLKGL-DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 88/188 (46%), Gaps = 12/188 (6%)
Query: 3 SDVFLSNALIHAYGKCKCIEGAR----RVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAI 58
+DVF N + + + K + A+ R+ + V VS+T+L Y G + +
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRL 491
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
F EM GV+PNA+T + ++ A + + + + +GM + + ++L+ +
Sbjct: 492 FVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLI--HGE 549
Query: 119 CLS--VKEARAVFDLMP----HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
C++ V EA +F M +++V++ +++ + ++ L+ M R+G D
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Query: 173 ATWNAVIG 180
+ A+IG
Sbjct: 610 KVYTALIG 617
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 190/404 (47%), Gaps = 26/404 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV + ++ I Y K + A V+ + + +VV++T L G + ++
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS----- 114
++ G++P+ VT SS++ + +L SG A++ ++ G +V + LV
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ 474
Query: 115 ---MYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
++A SVK L + V +N ++ + +++ L +F M G+K D
Sbjct: 475 GLMLHAMRFSVKMLGQSIRL----NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
AT+ V+ + G+ EE+L + +M KMG +P+ + +++ A +G ++
Sbjct: 531 VATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFD 590
Query: 232 YGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHG 286
R++I D++ ++++ KC + + F+ + + D+V +NTMI
Sbjct: 591 LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 650
Query: 287 NGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY 346
EA +FE + + PN+VT T ++ + +D +++F+ M +P+A Y
Sbjct: 651 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SKPNAVTY 709
Query: 347 SCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALL-GACR 386
C++D FS++ ++ ++K + M + P+ ++ ++ G C+
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 753
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 144/324 (44%), Gaps = 25/324 (7%)
Query: 101 GMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKG 156
G NV L++ + + + A +F +M R D ++++ ++ YF G
Sbjct: 281 GPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMG 340
Query: 157 LALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPA 216
LFS+ +GVK D +++ I +++G + + ++M G PN +T + ++
Sbjct: 341 HKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 217 C----SILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLN----LSRNVFDMMP 268
I E+ M ++ G+ I SS L+ + KC +L L ++ M
Sbjct: 401 LCQDGRIYEAFGMYGQILKRGMEPSIVTYSS---LIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 269 KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
DVV + ++ + G A+ ML ++ N V F ++ G DE L+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA-YKFIQ--RMPLEPTASAWGALLGA- 384
+F MG + ++PD ++ ++ V GRL+EA + F + +M LEP A A+ L+ A
Sbjct: 518 VFRLMGI-YGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Query: 385 CRVFKNVELAKIAAKKLFDIEPNN 408
C+ + +LFD+ N
Sbjct: 577 CK-----HMKPTIGLQLFDLMQRN 595
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 149/322 (46%), Gaps = 21/322 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+V + N+LI + + + A +VF + + DV ++T++ + G + L +F
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 60 HEMGWNGVKPNAVTVSSILPA-CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
M G++P+A+ +++ A C +K G + R+ + ++ VC+ ++ + +
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 119 CLSVKEARAVFDLMPH----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
C +++A F+ + D V++N ++ Y + + ++ +F + + T
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----PACSILESLRMGKEVH 230
+I +N + ++ M M + G KPN +T ++ + I S ++ +E+
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 231 CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVF----DMMPKKDVVAWNTMIIANAMHG 286
G+ I S + ++ K ++ + N+F D DVVA+ +I G
Sbjct: 734 EKGISPSI---VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Query: 287 NGKEALLLFENMLRSGVKPNSV 308
EA LL+E+MLR+GVKP+ +
Sbjct: 791 RLVEAALLYEHMLRNGVKPDDL 812
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 165/390 (42%), Gaps = 58/390 (14%)
Query: 36 VVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHG 95
+V+++SL + CG R G A++ +M G P+ V ++ S+ G +H
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK-----QGLMLHA 480
Query: 96 --FAVR---HGMVENVFVCSALVSMYARCLSVKEARAVFDLMP----------------- 133
F+V+ + NV V ++L+ + R EA VF LM
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 134 ----------------------HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
DA+++ ++ A+ + + GL LF M R + AD
Sbjct: 541 SIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISAD 600
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
A N VI + + E++ + + + +P+ +T ++++ L L + +
Sbjct: 601 IAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 232 YGLRHRIGDLSST-TALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHG 286
G + T T L+++ K +D++ + +F +M +K + V + ++ +
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 720
Query: 287 NGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY 346
+ + + LFE M G+ P+ V+++ ++ G VDE IF+ D + PD Y
Sbjct: 721 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDAKLLPDVVAY 779
Query: 347 SCMVDVFSRAGRLDEA---YKFIQRMPLEP 373
+ ++ + + GRL EA Y+ + R ++P
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGVKP 809
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 163/377 (43%), Gaps = 39/377 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ +DV + N +I + K + ++ A +F ++ + +VV+++SL SC + G
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + PN VT ++++ A + + ++ ++ + ++F ++LV+ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 117 ARCLSVKEARAVFDLMPHRD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ +A+ +F+ M +D V++N ++ + +K E G LF MS G+ D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+ +I G +G + + ++ ++M G P+ +T S +L L EV Y
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 233 GLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
+ I K D+ + TMI G +
Sbjct: 496 MQKSEI------------------------------KLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
LF ++ GVKPN VT+ ++SG RL+ E + M D + P++ Y+ ++
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRA 584
Query: 353 FSRAGRLDEAYKFIQRM 369
R G + + I+ M
Sbjct: 585 HLRDGDKAASAELIREM 601
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 168/394 (42%), Gaps = 18/394 (4%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQ----GLAIFHEMGW 64
N L+ A K K + + + + ++V + +NC R LA+ +M
Sbjct: 89 NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G +P+ VT+SS+L K ++ A+ V G + + L+ E
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 125 ARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
A A+ D M R + V++ V+ + + L L ++M ++AD +N +I
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
+ +++L + ++M+ G +PN +T SS++ ++ + +I
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLF 295
+L + AL+ + K + ++D M K+ D+ +N+++ MH +A +F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSR 355
E M+ P+ VT+ ++ G S+ V++G ++F M LV D Y+ ++
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV-GDTVTYTTLIQGLFH 447
Query: 356 AGRLDEAYKFIQRM---PLEPTASAWGALL-GAC 385
G D A K ++M + P + LL G C
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 112/253 (44%), Gaps = 34/253 (13%)
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P V +N +L+A K+++ ++L +M R + T+N +I Q +L
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
+L KM K+G++P+ +T+SS+L +C+G R +S ALV
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNG-------------YCHGKR-----ISDAVALV---- 178
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ +M + D + + T+I +H EA+ L + M++ G +PN VT+
Sbjct: 179 --------DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP-- 370
V++G D L + N M +E D ++ ++D + +D+A + M
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Query: 371 -LEPTASAWGALL 382
+ P + +L+
Sbjct: 290 GIRPNVVTYSSLI 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 96/215 (44%), Gaps = 8/215 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
DV N LI + K K +E +F ++ R D V++T+L + G +F
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M +GV P+ +T S +L L + + + + ++++ + ++ +
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
V + +F + + + V++N +++ + + ++ AL +M +G + T+
Sbjct: 519 GKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTY 578
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
N +I + +G S E++R+M+ F + TI
Sbjct: 579 NTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 170/377 (45%), Gaps = 17/377 (4%)
Query: 32 VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGK 91
+ D+ +++ +C+ LA+ +M G +P+ VT+SS+L K ++
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAY 147
A+ V G + F + L+ EA A+ D M R D V++ V+
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 148 FTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNE 207
+ + L+L +M + ++AD +N +I G + +++L + +M G +P+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293
Query: 208 ITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDM 266
T SS++ + + +I ++ + +AL+ + K L + ++D
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353
Query: 267 MPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
M K+ D+ ++++I MH EA +FE M+ PN VT++ ++ G ++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWG 379
V+EG+++F M + LV + Y+ ++ F +A D A ++M + P +
Sbjct: 414 VEEGMELFREMSQRGLV-GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472
Query: 380 ALL-GACRVFKNVELAK 395
LL G C KN +LAK
Sbjct: 473 ILLDGLC---KNGKLAK 486
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/377 (20%), Positives = 170/377 (45%), Gaps = 39/377 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ +DV + N +I K K ++ A +F ++ + DV +++SL SC N G
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + PN VT S+++ A + L + ++ ++ + ++F S+L++ +
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373
Query: 117 ARCLSVKEARAVFDLMPHRD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ EA+ +F+LM +D V+++ ++ + K E+G+ LF MS+ G+ +
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+ +I G + + + + ++M +G PN +T + +L + ++ ++ K +
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG--LCKNGKLAKAM--- 488
Query: 233 GLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEAL 292
+V+ Y + S + + D+ +N MI G ++
Sbjct: 489 --------------VVFEYLQRSTM-----------EPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
LF N+ GV PN + + ++SG +E + M D + P++ Y+ ++
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRA 582
Query: 353 FSRAGRLDEAYKFIQRM 369
R G + + + I+ M
Sbjct: 583 RLRDGDREASAELIKEM 599
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 155/354 (43%), Gaps = 49/354 (13%)
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P V +N +L+A ++E ++L +M G+ D T++ I Q +L
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 193 EMLRKMQKMGFKPNEITISSIL----------PACSILESL-RMGKE---------VHCY 232
+L KM K+G++P+ +T+SS+L A ++++ + MG + +H
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198
Query: 233 GLRHRIG----------------DLSSTTALVYMYAKCSDLNLSRNVFDMMPK----KDV 272
L ++ DL + +V K D++L+ ++ M K DV
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 258
Query: 273 VAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIFN 331
V +NT+I + + +AL LF M G++P+ T++ ++S C++ R D + +
Sbjct: 259 VIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 318
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRVF 388
+ R + P+ +S ++D F + G+L EA K M ++P + +L+ +
Sbjct: 319 MIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 376
Query: 389 KNVELAKIAAKKLF--DIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
++ AK + + D PN Y +L AK E ++ M RG+
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVV-TYSTLIKGFCKAKRVEEGMELFREMSQRGL 429
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/250 (17%), Positives = 107/250 (42%), Gaps = 43/250 (17%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRD----VVSWTSLSSCYVNCGLPRQGLAIF 59
D+F ++LI+ + ++ A+ +F+ ++ +D VV++++L + +G+ +F
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G+ N VT ++++ + +D ++ + + V G+ N+ + L+ +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481
Query: 120 LSVKEARAVFDLMPHR---------------------------------------DAVSW 140
+ +A VF+ + + +++
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
N +++ + E+ +L +M +G + T+N +I + +G E S E++++M+
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Query: 201 MGFKPNEITI 210
GF + TI
Sbjct: 602 CGFAGDASTI 611
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 181/399 (45%), Gaps = 20/399 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVS----WTSLSSCYVNCGLPRQGLAIF 59
D +ALI +Y K + A R+FD++ + +T+L Y G + L +F
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G P T + ++ + ++ + +R G+ +V + L+++ +
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 120 LSVKEARAVFDLMP----HRDAVSWNGVLTAYFTNKEYEKGLA-LFSRMSREGVKADKAT 174
V+E VF M VS+N V+ A F +K + ++ F +M + V + T
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFT 411
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
++ +I G + + E++L +L +M + GF P S++ A + E+ L
Sbjct: 412 YSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF-KEL 470
Query: 235 RHRIGDLSSTT--ALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNG 288
+ G++SS ++ + KC L+ + ++F+ M + DV A+N ++ G
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
EA L M +G + + + +L+G + + + +++F ++ + ++PD Y+
Sbjct: 531 NEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI-KHSGIKPDGVTYNT 589
Query: 349 MVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGA 384
++ F+ AG +EA + ++ M E A + ++L A
Sbjct: 590 LLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDA 628
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 156/355 (43%), Gaps = 40/355 (11%)
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMG--FKPNEITISS 212
K L++F + K +T+N+VI M+ GQ E+ E+ +M G F P+ IT S+
Sbjct: 180 KALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF-PDTITYSA 238
Query: 213 ILPACSIL----ESLRMGKEV--HCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDM 266
++ + L ++R+ E+ +C +I T L+ +Y K + + ++F+
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKI-----YTTLLGIYFKVGKVEKALDLFEE 293
Query: 267 MPK----KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
M + V + +I G EA +++MLR G+ P+ V +++
Sbjct: 294 MKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGR 353
Query: 323 VDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWG 379
V+E +F+ MG ++ + + +F + E + +M + P+ +
Sbjct: 354 VEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYS 413
Query: 380 ALL-GAC---RVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILM 435
L+ G C RV K + L + +K F P P Y SL N L AK + A+++ +
Sbjct: 414 ILIDGYCKTNRVEKALLLLEEMDEKGF---PPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 436 KDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPD 490
K+ ++ V +RV+ ++ G K+ E +D L +MK G PD
Sbjct: 471 KE---------NFGNVSSRVYAVMIKHFGKCG--KLSEAVD-LFNEMKNQGSGPD 513
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 149/355 (41%), Gaps = 63/355 (17%)
Query: 32 VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGK 91
+G D+ S+ + +C C L++ +M G +P+ VTVSS+
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL-------------- 145
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNK 151
I+GF + + + + + S + M R D V +N ++
Sbjct: 146 -INGFCQGNRVFDAIDLVSKMEEMGFR----------------PDVVIYNTIIDGSCKIG 188
Query: 152 EYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITIS 211
+ LF RM R+GV+AD T+N+++ G +G+ ++ ++R M PN IT +
Sbjct: 189 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 248
Query: 212 SILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
+++ ++ GK L M +C D D
Sbjct: 249 AVIDV-----FVKEGKFSEAMKLYEE------------MTRRCVD-------------PD 278
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFN 331
V +N++I MHG EA + + M+ G P+ VT+ +++G S+ VDEG ++F
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 332 SMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL-GAC 385
M + LV D Y+ ++ + +AGR D A + RM P + LL G C
Sbjct: 339 EMAQRGLV-GDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 150/344 (43%), Gaps = 41/344 (11%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFD----DLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV + N +I K + A +FD D V D V++ SL + G +
Sbjct: 173 DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M + PN +T ++++ + + ++ R + +VF ++L++
Sbjct: 233 RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMH 292
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
V EA+ + DLM + D V++N ++ + +K ++G LF M++ G+ D T+
Sbjct: 293 GRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N +I G + G+ + + E+ +M +PN T S +L YGL
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL-----------------YGL- 391
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+ ALV N+ ++ ++ D+ +N +I GN ++A LF
Sbjct: 392 --CMNWRVEKALVLFE------NMQKSEIEL----DITTYNIVIHGMCKIGNVEDAWDLF 439
Query: 296 ENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLV 339
++ G+KP+ V++T ++SG R D+ ++ M D L+
Sbjct: 440 RSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 144/318 (45%), Gaps = 45/318 (14%)
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P V ++ VL+ +K Y+ ++LF M G+ D ++N VI + +L
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
++ KM K G++P+ +T+SS++ C G +R+ D
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLING-------------FCQG--NRVFDA----------- 158
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
++L + +M + DVV +NT+I + G +A+ LF+ M R GV+ ++VT+
Sbjct: 159 ----IDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNS 214
Query: 313 VLSG-CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP- 370
+++G C R D + + + RD + P+ ++ ++DVF + G+ EA K + M
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRD--IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 371 --LEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPN-----NPGNYVSLFNILVSAK 423
++P + +L+ + V+ AK++ D+ + Y +L N +K
Sbjct: 273 RCVDPDVFTYNSLINGLCMHGRVD----EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 424 LWSEASQIRILMKDRGIT 441
E +++ M RG+
Sbjct: 329 RVDEGTKLFREMAQRGLV 346
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
DVF N+LI+ ++ A+++ D +V + DVV++ +L + + +G +F
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
EM G+ + +T ++I+ + ++ + I R N+ S L +Y C
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS---RMDSRPNIRTYSIL--LYGLC 392
Query: 120 LS--VKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKA 173
++ V++A +F+ M D ++N V+ E LF +S +G+K D
Sbjct: 393 MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVV 452
Query: 174 TWNAVIGGCMENGQTEESLEMLRKMQKMGFKP 205
++ +I G Q ++S + RKMQ+ G P
Sbjct: 453 SYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 104/505 (20%), Positives = 207/505 (40%), Gaps = 113/505 (22%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLV----GRDVVSWTSLSSCYVNCGLPRQGLAIF 59
D NAL+ YGK + A +V +++V +V++ SL S Y G+ + + +
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELK 372
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
++M G KP+ T +++L + S +I G N+ +A + MY
Sbjct: 373 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 432
Query: 120 LSVKEARAVFD------LMPHRDAVSWNGVLTAYFTN----------KE----------- 152
E +FD L P D V+WN +L + N KE
Sbjct: 433 GKFTEMMKIFDEINVCGLSP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 153 --------------YEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKM 198
+E+ + ++ RM GV D +T+N V+ G E+S ++L +M
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
Query: 199 QKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG------------------- 239
+ KPNE+T CS+L + GKE+ GL H +
Sbjct: 551 EDGRCKPNELTY------CSLLHAYANGKEI---GLMHSLAEEVYSGVIEPRAVLLKTLV 601
Query: 240 --------------------------DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK--- 270
D+++ ++V +Y + + + V D M ++
Sbjct: 602 LVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFT 661
Query: 271 -DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQ 328
+ +N+++ ++ + ++ + +L G+KP+ +++ V+ C ++R+ D +
Sbjct: 662 PSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDAS-R 720
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALL-GA 384
IF+ M R+ + PD Y+ + ++ +EA ++ M P + + +++ G
Sbjct: 721 IFSEM-RNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Query: 385 CRVFKNVELAKIAAKKLFDIEPNNP 409
C++ + E AK+ + L +++P+ P
Sbjct: 780 CKLNRKDE-AKLFVEDLRNLDPHAP 803
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 198/484 (40%), Gaps = 89/484 (18%)
Query: 11 LIHAYGKCKCIEGARRVF----DDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+I GK + A +F +D DV S+TSL S + N G R+ + +F +M +G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 67 VKPNAVTVSSILPACSEL------------KDLNSGKAIHGFAVR-----------HGMV 103
KP +T + IL ++ K + G A + H
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 104 ENVF-------------VCSALVSMYARCLSVKEARAVFDLMP----HRDAVSWNGVLTA 146
VF +AL+ +Y + KEA V + M V++N +++A
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 147 YFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPN 206
Y + ++ + L ++M+ +G K D T+ ++ G G+ E ++ + +M+ G KPN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 207 EITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDM 266
T ++ + YG R + T ++ ++ + NV +
Sbjct: 419 ICTFNAF---------------IKMYGNRGKF------TEMMKIFDEI-------NVCGL 450
Query: 267 MPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEG 326
P D+V WNT++ +G E +F+ M R+G P TF ++S S ++
Sbjct: 451 SP--DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Query: 327 LQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLG 383
+ ++ M D V PD + Y+ ++ +R G +++ K + M +P + +LL
Sbjct: 509 MTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLH 567
Query: 384 ACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFNILV----SAKLWSEASQIRILMKD 437
A K + L A++++ IEP L LV L EA + +K+
Sbjct: 568 AYANGKEIGLMHSLAEEVYSGVIEPR-----AVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 438 RGIT 441
RG +
Sbjct: 623 RGFS 626
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 48/396 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
D+ N ++ AY + A F+ + G D ++ + C G Q L +F
Sbjct: 115 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 174
Query: 60 HEMGWNGV--KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
+ M +P+ VT +SI+ S ++ + +A+ V G+ N+ +AL+ YA
Sbjct: 175 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 234
Query: 118 ------RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
LSV ++P D VS+ +L +Y +++ K +F M +E K +
Sbjct: 235 VHGMSGTALSVLGDIKQNGIIP--DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 292
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
T+NA+I NG E++E+ R+M++ G KPN +++ ++L ACS R K+V+
Sbjct: 293 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-----RSKKKVN- 346
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
V A+ +NL + A+N+ I + ++A
Sbjct: 347 -------------VDTVLSAAQSRGINL-----------NTAAYNSAIGSYINAAELEKA 382
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
+ L+++M + VK +SVTFT ++SG E + M D + YS ++
Sbjct: 383 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLC 441
Query: 352 VFSRAGRLDEAYKFIQRMPL---EPTASAWGALLGA 384
+S+ G++ EA +M + EP A+ ++L A
Sbjct: 442 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 150/323 (46%), Gaps = 50/323 (15%)
Query: 112 LVSMYARCLSVKEARAVFDLMPH----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG 167
++ ++AR V +AR +F M DA +++ ++ A+ ++ + L M R
Sbjct: 17 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 76
Query: 168 VKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP----------AC 217
+ ++T+N +I C +G E+LE+ +KM G P+ +T + +L A
Sbjct: 77 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 136
Query: 218 SILESLRMGKE----------VHCY--------------GLRHRIG----DLSSTTALVY 249
S E ++ K ++C +R + D+ + T++++
Sbjct: 137 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 196
Query: 250 MYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
+Y+ ++ R VF+ M K ++V++N ++ A A+HG AL + ++ ++G+ P
Sbjct: 197 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 256
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ V++T +L+ SR + ++F M R +P+ Y+ ++D + G L EA +
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 366 IQRMP---LEPTASAWGALLGAC 385
++M ++P + LL AC
Sbjct: 316 FRQMEQDGIKPNVVSVCTLLAAC 338
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 171/388 (44%), Gaps = 87/388 (22%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVF----DDLVGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
DV L+++YG+ + A+ VF + +VV++ +L Y + G + + IF
Sbjct: 257 DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIF 316
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M +G+KPN V+V ++L ACS S K ++ V+ V
Sbjct: 317 RQMEQDGIKPNVVSVCTLLAACSR-----SKKKVN--------VDTV------------- 350
Query: 120 LSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
LS ++R + + + ++N + +Y E EK +AL+ M ++ VKAD T+ +I
Sbjct: 351 LSAAQSRGI-----NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG 239
G + E++ L++M+ + S+ + KEV+
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDL--------------------SIPLTKEVY--------- 436
Query: 240 DLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIA-NAMHGNGKEALLL 294
++++ Y+K + + ++F+ M + DV+A+ +M+ A NA GK A L
Sbjct: 437 -----SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK-ACEL 490
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV--DV 352
F M +G++P+S+ + ++ R ++G Q N L+ ++ V ++
Sbjct: 491 FLEMEANGIEPDSIACSALM------RAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEI 544
Query: 353 FSRAGRLDE---AYKFIQRM-PLEPTAS 376
FS L E A IQ M P P+ S
Sbjct: 545 FSACNTLQEWKRAIDLIQMMDPYLPSLS 572
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 176/396 (44%), Gaps = 48/396 (12%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
D+ N ++ AY + A F+ + G D ++ + C G Q L +F
Sbjct: 247 DLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLF 306
Query: 60 HEMGWNGV--KPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYA 117
+ M +P+ VT +SI+ S ++ + +A+ V G+ N+ +AL+ YA
Sbjct: 307 NSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYA 366
Query: 118 ------RCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
LSV ++P D VS+ +L +Y +++ K +F M +E K +
Sbjct: 367 VHGMSGTALSVLGDIKQNGIIP--DVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPN 424
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
T+NA+I NG E++E+ R+M++ G KPN +++ ++L ACS R K+V+
Sbjct: 425 VVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS-----RSKKKVN- 478
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
V A+ +NL + A+N+ I + ++A
Sbjct: 479 -------------VDTVLSAAQSRGINL-----------NTAAYNSAIGSYINAAELEKA 514
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
+ L+++M + VK +SVTFT ++SG E + M D + YS ++
Sbjct: 515 IALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLC 573
Query: 352 VFSRAGRLDEAYKFIQRMPL---EPTASAWGALLGA 384
+S+ G++ EA +M + EP A+ ++L A
Sbjct: 574 AYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 150/323 (46%), Gaps = 50/323 (15%)
Query: 112 LVSMYARCLSVKEARAVFDLMPH----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREG 167
++ ++AR V +AR +F M DA +++ ++ A+ ++ + L M R
Sbjct: 149 MIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAA 208
Query: 168 VKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----------PAC 217
+ ++T+N +I C +G E+LE+ +KM G P+ +T + +L A
Sbjct: 209 IAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKAL 268
Query: 218 SILESLRMGKE----------VHCY--------------GLRHRIG----DLSSTTALVY 249
S E ++ K ++C +R + D+ + T++++
Sbjct: 269 SYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMH 328
Query: 250 MYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
+Y+ ++ R VF+ M K ++V++N ++ A A+HG AL + ++ ++G+ P
Sbjct: 329 LYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIP 388
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ V++T +L+ SR + ++F M R +P+ Y+ ++D + G L EA +
Sbjct: 389 DVVSYTCLLNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 366 IQRMP---LEPTASAWGALLGAC 385
++M ++P + LL AC
Sbjct: 448 FRQMEQDGIKPNVVSVCTLLAAC 470
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 170/391 (43%), Gaps = 87/391 (22%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVF----DDLVGRDVVSWTSLSSCYVNCGLPRQGL 56
+ DV L+++YG+ + A+ VF + +VV++ +L Y + G + +
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
IF +M +G+KPN V+V ++L ACS K + V V + L +
Sbjct: 446 EIFRQMEQDGIKPNVVSVCTLLAACSRSK------------------KKVNVDTVLSAAQ 487
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+R +++ A ++N + +Y E EK +AL+ M ++ VKAD T+
Sbjct: 488 SRGINLNTA-------------AYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFT 534
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
+I G + E++ L++M+ + S+ + KEV+
Sbjct: 535 ILISGSCRMSKYPEAISYLKEMEDL--------------------SIPLTKEVY------ 568
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIA-NAMHGNGKEA 291
++++ Y+K + + ++F+ M + DV+A+ +M+ A NA GK A
Sbjct: 569 --------SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK-A 619
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV- 350
LF M +G++P+S+ + ++ R ++G Q N L+ ++ V
Sbjct: 620 CELFLEMEANGIEPDSIACSALM------RAFNKGGQPSNVFVLMDLMREKEIPFTGAVF 673
Query: 351 -DVFSRAGRLDE---AYKFIQRM-PLEPTAS 376
++FS L E A IQ M P P+ S
Sbjct: 674 FEIFSACNTLQEWKRAIDLIQMMDPYLPSLS 704
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 165/379 (43%), Gaps = 49/379 (12%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
+A+F EM + P+ V S A + K N +G+ N++ + +++
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 115 MYARCLSVKEARAVF----DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+ RC A +V L D ++N ++ F + + + L RM G +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC----SILESLRMG 226
D T+N+++ G +G T +L++LRKM++ K + T S+I+ + I ++ +
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 227 KEVHCYGL--------------------------------RHRIGDLSSTTALVYMYAKC 254
KE+ G+ R + ++ + L+ ++ K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 255 SDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTF 310
L + ++ M + +++ +NT++ M EA + + M+R+ P+ VTF
Sbjct: 312 GKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTF 371
Query: 311 TGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP 370
T ++ G + VD+G+++F ++ + LV +A YS +V F ++G++ A + Q M
Sbjct: 372 TSLIKGYCMVKRVDDGMKVFRNISKRGLV-ANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 371 ---LEPTASAWGALL-GAC 385
+ P +G LL G C
Sbjct: 431 SHGVLPDVMTYGILLDGLC 449
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 161/375 (42%), Gaps = 39/375 (10%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAI 58
+DVF + +I + + CI+ A +F ++ + VV++ SL G G +
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+M + PN +T + +L + L ++ + G+ N+ + L+ Y
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 119 CLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
+ EA + DLM D V++ ++ Y K + G+ +F +S+ G+ A+ T
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
++ ++ G ++G+ + + E+ ++M G P+ +T +L + ++ ++ K + +
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG--LCDNGKLEKALEIFE- 462
Query: 235 RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
+L ++ D+ +V + T+I G ++A L
Sbjct: 463 -----------------------DLQKSKMDL----GIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F ++ GVKPN +T+T ++SG + E + M D P+ Y+ ++
Sbjct: 496 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG-NAPNDCTYNTLIRAHL 554
Query: 355 RAGRLDEAYKFIQRM 369
R G L + K I+ M
Sbjct: 555 RDGDLTASAKLIEEM 569
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 117/278 (42%), Gaps = 29/278 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLV----GRDVVSWTSLSSCYVNCGLPRQGL 56
++ ++ N L+ Y + A + D +V D+V++TSL Y G+
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+F + G+ NAVT S ++ + + + + V HG++ +V L+
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 117 ARCLSVKEARAVF-DLMPHR---DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+++A +F DL + V + ++ + E LF + +GVK +
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+ +I G + G E+ +LRKM++ G PN+ T ++++ A
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA---------------- 552
Query: 233 GLRHRIGDLSSTTALVYMYAKC---SDLNLSRNVFDMM 267
R GDL+++ L+ C +D + + V DM+
Sbjct: 553 --HLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 180/384 (46%), Gaps = 16/384 (4%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGL 56
+ DVF N +I + + K +E A + +++ G +V+W L + G + +
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
EM + G++ + V +S++ + +L+ GKA+ + G + L+ +
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 117 ARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ +KEA +F+ M R + ++ G++ + ++ L L + M + + +
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+N +I ++G +++E++ M+K +P+ IT + +L L ++
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412
Query: 233 GLR---HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMH 285
L+ + D+ S AL++ K + L+ + +++D++ +K D V N ++ +
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472
Query: 286 GNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANH 345
G+ +A+ L++ + S + NS T+T ++ G + +++ + M R ++P
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-RVSELQPSVFD 531
Query: 346 YSCMVDVFSRAGRLDEAYKFIQRM 369
Y+C++ + G LD+A++ + M
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEM 555
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 170/400 (42%), Gaps = 50/400 (12%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
D+V +TSL + +CG +G A+F E+ G P A+T ++++ +L L I
Sbjct: 246 DLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF 305
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRD----AVSWNGVLTAYFTN 150
F + G+ NV+ + L+ KEA + +LM +D AV++N ++ +
Sbjct: 306 EFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKD 365
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMG--FKPNEI 208
+ + M + + D T+N ++GG G +E+ ++L M K P+ I
Sbjct: 366 GLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVI 425
Query: 209 TISSILPA-CS-------------ILESLRMGKEVHCYGLRH---RIGDLS--------- 242
+ ++++ C ++E L G V L + + GD++
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 243 ----------STTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNG 288
+ TA++ + K LN+++ + M + V +N ++ + G+
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSL 545
Query: 289 KEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSC 348
+A LFE M R P+ V+F ++ G + + + M R L PD YS
Sbjct: 546 DQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGL-SPDLFTYSK 604
Query: 349 MVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGAC 385
+++ F + G LDEA F +M EP A ++L C
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 52/344 (15%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
+ + +M N V++S +L +++ + ++ G NV+ + L+
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 115 MYARCLSVKEARAVF------DLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
R L +A ++ LMP D S+N V+ + KE EK L L + M G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMP--DVFSYNTVIRGFCEGKELEKALELANEMKGSGC 208
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
TW +I + G+ +E++ L++M+ MG +
Sbjct: 209 SWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE------------------------ 244
Query: 229 VHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFD-MMPKKD---VVAWNTMIIANAM 284
DL T+L+ + C +L+ + +FD ++ + D + +NT+I
Sbjct: 245 ----------ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCK 294
Query: 285 HGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM-GRDHLVEPDA 343
G KEA +FE M+ GV+PN T+TG++ G E LQ+ N M +D EP+A
Sbjct: 295 LGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE--EPNA 352
Query: 344 NHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGA 384
Y+ +++ + G + +A + ++ M P + LLG
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 164/380 (43%), Gaps = 24/380 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
N LI + K ++ A +F+ ++ R +V ++T L G ++ L + + M
Sbjct: 286 NTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIE 345
Query: 65 NGVKPNAVTVSSIL-PACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
+PNAVT + I+ C + ++ + + R +N+ L + A+ +
Sbjct: 346 KDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKG-DLD 404
Query: 124 EARAVFDLM------PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
EA + LM D +S+N ++ + L ++ + + D+ T N
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHR 237
++ ++ G +++E+ +++ N T ++++ L + K + C + R
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC---KMR 521
Query: 238 IGDLSSTT----ALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGK 289
+ +L + L+ K L+ + +F+ M + DVV++N MI + G+ K
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 290 EALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
A L M R+G+ P+ T++ +++ +DE + F+ M D EPDA+ +
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM-VDSGFEPDAHICDSV 640
Query: 350 VDVFSRAGRLDEAYKFIQRM 369
+ G D+ + ++++
Sbjct: 641 LKYCISQGETDKLTELVKKL 660
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
DV NALIH K + A ++D LV + D V+ L + + G + + ++
Sbjct: 423 DVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELW 482
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
++ + + N+ T ++++ + LN K + + +VF + L+S +
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
S+ +A +F+ M D VS+N ++ + + +L MSR G+ D T+
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
+ +I ++ G +E++ KM GF+P+ S+L C
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 196/453 (43%), Gaps = 28/453 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGRDV-VSWTSLSSCYVNCGLPRQ---GLAIFHEMGW 64
N LIH K + A V+ ++ S + SS V G R + + EM
Sbjct: 192 NGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMET 251
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+KPN T + + +N I G +V + L+ +
Sbjct: 252 LGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 125 ARAVFDLMP---HR-DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
A+ VF+ M H+ D V++ +L + N++ + +S M ++G D T+ ++
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG- 239
+ G E+ + L M+ G PN T ++++ C +L R+ + +G +G
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLI--CGLLRVHRLDDALELFGNMESLGV 429
Query: 240 DLSSTTALVYM--YAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALL 293
++ T +V++ Y K D + F+ M K ++VA N + + A G +EA
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ 489
Query: 294 LFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVF 353
+F + G+ P+SVT+ ++ S +DE +++ + M ++ EPD + +++
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGCEPDVIVVNSLINTL 548
Query: 354 SRAGRLDEAYKFIQR---MPLEPTASAWGALLGAC----RVFKNVELAKIAAKKLFDIEP 406
+A R+DEA+K R M L+PT + LL ++ + +EL + +K P
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC---P 605
Query: 407 NNPGNYVSLFNILVSAKLWSEASQIRILMKDRG 439
N + +LF+ L + A ++ M D G
Sbjct: 606 PNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 121/259 (46%), Gaps = 15/259 (5%)
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
D ++N +L AY + + ++ L+ MS +A+ T N VI G ++ G +++L++
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 196 RK-MQKMGFKPNEITISSILPACS----ILESLRMGKEVHCYGLRHRIGDLSSTTALVYM 250
M F P T ++ S + E+ ++ + + YG R + + L+
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP---NCAIYNILING 935
Query: 251 YAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPN 306
+ K + + + +F M K+ D+ ++ ++ M G E L F+ + SG+ P+
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA---Y 363
V + +++G S ++E L +FN M + PD Y+ ++ AG ++EA Y
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 364 KFIQRMPLEPTASAWGALL 382
IQR LEP + AL+
Sbjct: 1056 NEIQRAGLEPNVFTFNALI 1074
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/329 (21%), Positives = 135/329 (41%), Gaps = 37/329 (11%)
Query: 46 YVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVEN 105
Y G L F +M G+ PN V ++ L + ++ K I G+V +
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 106 VFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFS 161
+ ++ Y++ + EA + M D + N ++ + ++ +F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 162 RMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE 221
RM +K T+N ++ G +NG+ +E++E+ M + G PN IT + ++ +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN------TLFD 616
Query: 222 SLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIA 281
L EV T AL ++ + DM DV +NT+I
Sbjct: 617 CLCKNDEV--------------TLALKMLF----------KMMDMGCVPDVFTYNTIIFG 652
Query: 282 NAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP 341
+G KEA+ F M + V P+ VT +L G + L+++ +I + + +P
Sbjct: 653 LVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQP 711
Query: 342 DANHYSCMV-DVFSRAGRLDEAYKFIQRM 369
+ ++ + + AG +D A F +R+
Sbjct: 712 ANLFWEDLIGSILAEAG-IDNAVSFSERL 739
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 142/328 (43%), Gaps = 38/328 (11%)
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
+A S+NG++ ++ + + ++ RM EG + T+++++ G + + + +L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG------DLSSTTALVY 249
++M+ +G KPN T + + R GK Y + R+ D+ + T L+
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLG-----RAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 250 MYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKP 305
L+ ++ VF+ M K D V + T++ + + + + M + G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 306 NSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF 365
+ VTFT ++ + E + M RD + P+ + Y+ ++ R RLD+A +
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVM-RDQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 366 ---IQRMPLEPTASAW----------GALLGACRVFKNVELAKIAAKKLFDIEPNNPGNY 412
++ + ++PTA + G + A F+ ++ IA PN
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIA--------PNIVACN 472
Query: 413 VSLFNILVSAKLWSEASQIRILMKDRGI 440
SL++ L A EA QI +KD G+
Sbjct: 473 ASLYS-LAKAGRDREAKQIFYGLKDIGL 499
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 114/260 (43%), Gaps = 16/260 (6%)
Query: 122 VKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
++E VFDLM R D ++ + + ++ +M G + ++N
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC----SILESLRMGKEVHCYG 233
+I +++ E++E+ R+M GF+P+ T SS++ I + + KE+ G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 234 LRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGK 289
L+ + + T + + + +N + + M + DVV + +I A
Sbjct: 254 LKPNV---YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLD 310
Query: 290 EALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCM 349
A +FE M KP+ VT+ +L S +R +D Q ++ M +D V PD ++ +
Sbjct: 311 CAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTIL 369
Query: 350 VDVFSRAGRLDEAYKFIQRM 369
VD +AG EA+ + M
Sbjct: 370 VDALCKAGNFGEAFDTLDVM 389
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 150/360 (41%), Gaps = 42/360 (11%)
Query: 21 IEGARRVFDDL-----VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVS 75
+ GAR +F+ V + ++ L + + +F ++ G P+ T +
Sbjct: 765 VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYN 824
Query: 76 SILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF-DLMPH 134
+L A + ++ ++ H N + ++S + +V +A ++ DLM
Sbjct: 825 FLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSD 884
Query: 135 RD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEE 190
RD A ++ ++ + + LF M G + + A +N +I G + G+ +
Sbjct: 885 RDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADA 944
Query: 191 SLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYM 250
+ + ++M K G +P+ T S ++ ++ + G H +L
Sbjct: 945 ACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEG--------LHYFKEL--------- 987
Query: 251 YAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRS-GVKPNSVT 309
K S LN DVV +N +I +EAL+LF M S G+ P+ T
Sbjct: 988 --KESGLN-----------PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ ++ + +V+E +I+N + R L EP+ ++ ++ +S +G+ + AY Q M
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGL-EPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 142/343 (41%), Gaps = 56/343 (16%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
N LI + IE A+ VF + DV ++ L Y G + ++ EM
Sbjct: 789 NLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 65 NGVKPNAVTVSSILP----------ACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
+ + N +T + ++ A DL S + A +G L+
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYG---------PLID 899
Query: 115 MYARCLSVKEARAVFDLMP----HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
++ + EA+ +F+ M + +N ++ + E + ALF RM +EGV+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
D T++ ++ G+ +E L +++++ G P+ + + I ++
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLI---------------IN 1004
Query: 231 CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKE 290
G HR+ + ALV +++ SR + D+ +N++I+ + G +E
Sbjct: 1005 GLGKSHRLEE-----ALVLF----NEMKTSRGI-----TPDLYTYNSLILNLGIAGMVEE 1050
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
A ++ + R+G++PN TF ++ G S S + ++ +M
Sbjct: 1051 AGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 149/352 (42%), Gaps = 23/352 (6%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSG-KAI 93
DV ++ ++ V G ++ + FH+M V P+ VT+ ++LP + + K I
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKII 700
Query: 94 HGFAVR-HGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH----RDAVSWNGVLTAYF 148
F N+F + S+ A + A + + + RD S + Y
Sbjct: 701 TNFLYNCADQPANLFWEDLIGSILAEA-GIDNAVSFSERLVANGICRDGDSILVPIIRYS 759
Query: 149 TNKEYEKGL-ALFSRMSRE-GVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPN 206
G LF + +++ GV+ T+N +IGG +E E + ++ +++ G P+
Sbjct: 760 CKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPD 819
Query: 207 EITISSILPAC----SILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRN 262
T + +L A I E + KE+ + + + ++ K +++ + +
Sbjct: 820 VATYNFLLDAYGKSGKIDELFELYKEMSTHECE---ANTITHNIVISGLVKAGNVDDALD 876
Query: 263 V-FDMMPKKD----VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
+ +D+M +D + +I + G EA LFE ML G +PN + +++G
Sbjct: 877 LYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGF 936
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ D +F M ++ V PD YS +VD GR+DE + + +
Sbjct: 937 GKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 165/373 (44%), Gaps = 39/373 (10%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
V + N +I A K + A +F ++ + +VV++ SL C N G +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M + PN VT S+++ A + L + ++ ++ + ++F S+L++ +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 121 SVKEARAVFDLMPHRD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+ EA+ +F+LM +D V++N ++ + K ++G+ LF MS+ G+ + T+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
+I G + + + + + ++M G P+ +T S +L GK
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC-----NNGK--------- 481
Query: 237 RIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFE 296
T +V+ Y + S + + D+ +N MI G ++ LF
Sbjct: 482 -----VETALVVFEYLQRSKM-----------EPDIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
++ GVKPN VT+T ++SG L +E +F M + + PD+ Y+ ++ R
Sbjct: 526 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRD 584
Query: 357 GRLDEAYKFIQRM 369
G + + I+ M
Sbjct: 585 GDKAASAELIREM 597
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/405 (20%), Positives = 169/405 (41%), Gaps = 47/405 (11%)
Query: 32 VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGK 91
+ ++ +++ L +C+ LA+ +M G +P+ VT++S+L ++
Sbjct: 112 ISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 171
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAY 147
++ G V G + F + L+ R EA A+ D M + D V++ V+
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 148 FTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNE 207
+ + L+L +M + ++ +N +I ++L + +M G +PN
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 208 ITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDM 266
+T +S++ + + +I ++ + +AL+ + K L + ++D
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 267 MPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRL 322
M K+ D+ ++++I MH EA +FE M+ PN VT+ ++ G ++
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 323 VDEGLQIFNSMGRDHLVE----------------------------------PDANHYSC 348
VDEG+++F M + LV PD YS
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 349 MVDVFSRAGRLDEA---YKFIQRMPLEPTASAWGALL-GACRVFK 389
++D G+++ A ++++QR +EP + ++ G C+ K
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 184/404 (45%), Gaps = 31/404 (7%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
D F N LIH + A + D +V + D+V++ + + G L++
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M ++P V ++I+ A K++N + G+ NV ++L+ RC
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI----RC 300
Query: 120 LS-----VKEARAVFDLMPHR---DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
L +R + D++ + + V+++ ++ A+ + + L+ M + + D
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP----ACSILESLRMGK 227
T++++I G + + +E+ M M PN +T ++++ A + E + + +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 228 EVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANA 283
E+ GL +G+ + T L++ + + + + ++ VF M D++ ++ ++
Sbjct: 421 EMSQRGL---VGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 284 MHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDA 343
+G + AL++FE + RS ++P+ T+ ++ G + V++G +F S+ V+P+
Sbjct: 478 NNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNV 536
Query: 344 NHYSCMVDVFSRAGRLDEAYKFIQRMPLE---PTASAWGALLGA 384
Y+ M+ F R G +EA + M E P + + L+ A
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 158/356 (44%), Gaps = 24/356 (6%)
Query: 102 MVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFS 161
+VE + SA+ M L + + +L + +++ ++ + + LA+ +
Sbjct: 81 IVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLA 140
Query: 162 RMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILE 221
+M + G + D T N+++ G + +++ ++ +M +MG++P+ T ++++
Sbjct: 141 KMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGL---- 196
Query: 222 SLRMGKEVHCYGLRHRI------GDLSSTTALVYMYAKCSDLNLSRNVFDMMPK----KD 271
R + L R+ DL + +V K D++L+ ++ M +
Sbjct: 197 -FRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIF 330
VV +NT+I A + N +AL LF M G++PN VT+ ++ C++ R D +
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGACRV 387
+ + R + P+ +S ++D F + G+L EA K M ++P + +L+ +
Sbjct: 316 DMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 388 FKNVELAKIAAKKLF--DIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGIT 441
++ AK + + D P N Y +L AK E ++ M RG+
Sbjct: 374 HDRLDEAKHMFELMISKDCFP-NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLV 428
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 163/346 (47%), Gaps = 18/346 (5%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
L +F +M + P+ V S +L A ++L + ++ G+ +++ + L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 115 MYARCLSVKEARAVFDLMP----HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+ RC + A + M V++ ++ + + + ++L ++ G +
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
+ +N +I E GQ +L++L+ M+KMG +P+ +T +S++ + S G
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT--RLFHSGTWGVSAR 240
Query: 231 CYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANA 283
R+G D+ + +AL+ +Y K L ++ ++ M ++ ++V +N++I
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 284 MHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDA 343
+HG EA + ++ G PN+VT+ +++G ++ VD+G++I M RD V+ D
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDG-VDGDT 359
Query: 344 NHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALL-GAC 385
Y+ + + +AG+ A K + RM + P + LL G C
Sbjct: 360 FTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 137/311 (44%), Gaps = 34/311 (10%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
DVV++ SL + + G I +M G+ P+ +T S+++ + L K +
Sbjct: 218 DVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQY 277
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTN 150
++ + N+ ++L++ + EA+ V +++ + +AV++N ++ Y
Sbjct: 278 NEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKA 337
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
K + G+ + MSR+GV D T+N + G + G+ + ++L +M G P+ T
Sbjct: 338 KRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTF 397
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK 270
+ +L + + ++GK ALV + DL S+ V
Sbjct: 398 NILLDG--LCDHGKIGK------------------ALV----RLEDLQKSKTVV------ 427
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
++ +N +I ++A LF ++ GV P+ +T+ ++ G RL E +++
Sbjct: 428 GIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELY 487
Query: 331 NSMGRDHLVEP 341
M ++ + P
Sbjct: 488 RKMQKEDGLMP 498
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 11/238 (4%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGL 56
++ DV +ALI YGK + A++ +++++ R ++V++ SL + GL +
Sbjct: 250 ISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ + + G PNAVT ++++ + K ++ G I R G+ + F + L Y
Sbjct: 310 KVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGY 369
Query: 117 ARCLSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ A V M H D ++N +L + + K L + +
Sbjct: 370 CQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGI 429
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
T+N +I G + + E++ + + G P+ IT +++ L R+ +E H
Sbjct: 430 ITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG---LRRKRLWREAH 484
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 189/410 (46%), Gaps = 26/410 (6%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGL 56
+ D+ + LI Y K + ++F + + DVV ++S YV G
Sbjct: 317 IEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATAS 376
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
++ M G+ PN VT + ++ + + ++G ++ GM ++ S+L+ +
Sbjct: 377 VVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGF 436
Query: 117 ARCLSVKEARAVFD---LMPHRDAVSWNGVLTAYFTNKEYEKGLALFS-RMSREGVKADK 172
+C +++ A+++ M + V GVL + + FS +M + ++ +
Sbjct: 437 CKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV 496
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESL-------RM 225
+N++I G + +E+L++ R M G KP+ T ++++ SI+E +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV-SIMEDAFCKHMKPTI 555
Query: 226 GKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMII 280
G ++ R++I D++ ++++ KC + + F+ + + D+V +NTMI
Sbjct: 556 GLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMIC 615
Query: 281 ANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVE 340
EA +FE + + PN+VT T ++ + +D +++F+ M +
Sbjct: 616 GYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG-SK 674
Query: 341 PDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALL-GACR 386
P+A Y C++D FS++ ++ ++K + M + P+ ++ ++ G C+
Sbjct: 675 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCK 724
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 161/361 (44%), Gaps = 29/361 (8%)
Query: 36 VVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHG 95
+V+++SL + CG R G A++ +M G P+ V ++ S+ G +H
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK-----QGLMLHA 480
Query: 96 --FAVR---HGMVENVFVCSALVSMYARCLSVKEARAVFDLMP----HRDAVSWNGVLTA 146
F+V+ + NV V ++L+ + R EA VF LM D ++ V+
Sbjct: 481 MRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Query: 147 YFTNKEYEK------GLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
+ K GL LF M R + AD A N VI + + E++ + + +
Sbjct: 541 SIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 600
Query: 201 MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSST-TALVYMYAKCSDLNL 259
+P+ +T ++++ L L + + G + T T L+++ K +D++
Sbjct: 601 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 660
Query: 260 SRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLS 315
+ +F +M +K + V + ++ + + + + LFE M G+ P+ V+++ ++
Sbjct: 661 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Query: 316 GCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA---YKFIQRMPLE 372
G VDE IF+ D + PD Y+ ++ + + GRL EA Y+ + R ++
Sbjct: 721 GLCKRGRVDEATNIFHQ-AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Query: 373 P 373
P
Sbjct: 780 P 780
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 144/328 (43%), Gaps = 27/328 (8%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
DV + L+ K + A R ++G+ +VV + SL + + L +F
Sbjct: 460 DVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF 519
Query: 60 HEMGWNGVKPNAVTVSSILPA-------CSELKDLNSGKAIHGFAVRHGMVENVFVCSAL 112
MG G+KP+ T ++++ C +K G + R+ + ++ VC+ +
Sbjct: 520 RLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVV 578
Query: 113 VSMYARCLSVKEARAVFDLMPH----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
+ + +C +++A F+ + D V++N ++ Y + + ++ +F +
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 638
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----PACSILESLR 224
+ T +I +N + ++ M M + G KPN +T ++ + I S +
Sbjct: 639 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 698
Query: 225 MGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVF----DMMPKKDVVAWNTMII 280
+ +E+ G+ I S + ++ K ++ + N+F D DVVA+ +I
Sbjct: 699 LFEEMQEKGISPSI---VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 281 ANAMHGNGKEALLLFENMLRSGVKPNSV 308
G EA LL+E+MLR+GVKP+ +
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/218 (19%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLV-GR---DVVSWTSLSSCYVNCGLPRQGL 56
+++D+ + N +IH KC IE A + F++L+ G+ D+V++ ++ Y C L R
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY--CSLRRLDE 625
Query: 57 A--IFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
A IF + PN VT++ ++ + D++ + G N L+
Sbjct: 626 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 115 MYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+++ + ++ + +F+ M + VS++ ++ ++ +F + +
Sbjct: 686 WFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLP 745
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEI 208
D + +I G + G+ E+ + M + G KP+++
Sbjct: 746 DVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 156/358 (43%), Gaps = 73/358 (20%)
Query: 32 VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGK 91
+ D+ S+T L C+ C LA+ +M G +P+ VT+ S+L
Sbjct: 110 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLL------------- 156
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNK 151
+GF C + + +S+ ++ F +P + V +N V+ N+
Sbjct: 157 --NGF------------CQG--NRFQEAVSLVDSMDGFGFVP--NVVIYNTVINGLCKNR 198
Query: 152 EYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITIS 211
+ L +F M ++G++AD T+N +I G +G+ ++ +LR M K PN I
Sbjct: 199 DLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFF- 257
Query: 212 SILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
TAL+ + K +L +RN++ M ++
Sbjct: 258 ---------------------------------TALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 272 VV----AWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGL 327
VV +N++I +HG +A +F+ M+ G P+ VT+ +++G S+ V++G+
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 328 QIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALL 382
++F M LV DA Y+ ++ + +AG+L+ A K RM + P + LL
Sbjct: 345 KLFCEMTYQGLV-GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 146/329 (44%), Gaps = 23/329 (6%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
+V + N +I+ K + + A VF + + D V++ +L S N G +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL 242
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M + PN + ++++ + +L + ++ +R +V NVF ++L++ +
Sbjct: 243 RDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH 302
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+ +A+ +FDLM + D V++N ++T + +K E G+ LF M+ +G+ D T+
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC----SILESLRMGKEVHC 231
N +I G + G+ + ++ +M G P+ +T + +L I ++L M ++
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVED--- 419
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLS------RNVFDMMPKKDVVAWNTMIIANAMH 285
L+ D+ T + + C L R++ K D +A+ TMI
Sbjct: 420 --LQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 286 GNGKEALLLFENMLRSGVKPNSVTFTGVL 314
G +EA L M G P+ + L
Sbjct: 478 GLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 123/275 (44%), Gaps = 39/275 (14%)
Query: 119 CLSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
C+ +A ++F M P V + VLT +++ + L+ +M G+ D +
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYS 116
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
+ +I + +L +L KM K+GF+P+ +T+ S+L C G
Sbjct: 117 FTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNG-------------FCQGN 163
Query: 235 RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
R + + L S + F +P +VV +NT+I + + AL +
Sbjct: 164 R---------------FQEAVSLVDSMDGFGFVP--NVVIYNTVINGLCKNRDLNNALEV 206
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F M + G++ ++VT+ ++SG S+S + ++ M + ++P+ ++ ++D F
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFV 265
Query: 355 RAGRLDEA---YKFIQRMPLEPTASAWGALL-GAC 385
+ G L EA YK + R + P + +L+ G C
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/394 (20%), Positives = 172/394 (43%), Gaps = 43/394 (10%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ D N++I +GK ++ F+++ DV+++ +L +C+ G GL
Sbjct: 293 LVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGL 352
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ EM NG+KPN V+ S+++ A + + + R G+V N + ++L+
Sbjct: 353 EFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAN 412
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTN-----KEYEKGLALFSRMSREGVKAD 171
+ ++ +A + + M V WN V + + ++ LF +M GV +
Sbjct: 413 CKIGNLSDAFRLGNEMLQV-GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
A++NA+I G ++ + +LE+L +++ G KP+ + + + LE + K V
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV-- 529
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
+ +C K + + + T++ A GN E
Sbjct: 530 ----------------MNEMKECG------------IKANSLIYTTLMDAYFKSGNPTEG 561
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
L L + M ++ VTF ++ G ++LV + + FN + D ++ +A ++ M+D
Sbjct: 562 LHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMID 621
Query: 352 VFSRAGRLDEAYKFIQRMP---LEPTASAWGALL 382
+ +++ A ++M L P +A+ +L+
Sbjct: 622 GLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 167/394 (42%), Gaps = 51/394 (12%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
N L+H + K + +R F D++G V ++ + C G +F EM +
Sbjct: 231 NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKF 290
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G+ P+ VT +S+ I GF + G +++ VC +E
Sbjct: 291 RGLVPDTVTYNSM---------------IDGFG-KVGRLDDT-VC-----------FFEE 322
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
+ D+ D +++N ++ + + GL + M G+K + +++ ++ +
Sbjct: 323 MK---DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPA-CSI---LESLRMGKEVHCYGLRHRIGD 240
G +++++ M+++G PNE T +S++ A C I ++ R+G E+ G+ +
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV-- 437
Query: 241 LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV----AWNTMIIANAMHGNGKEALLLFE 296
+ TAL+ + + +F M V+ ++N +I N AL L
Sbjct: 438 -VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 297 NMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRA 356
+ G+KP+ + + + G ++ + N M ++ ++ ++ Y+ ++D + ++
Sbjct: 497 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYTTLMDAYFKS 555
Query: 357 GRLDEAYKFIQRMP---LEPTASAWGALL-GACR 386
G E + M +E T + L+ G C+
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 161/382 (42%), Gaps = 55/382 (14%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
DV NALI+ + K + + ++ G +VVS+++L + G+ +Q + +
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M G+ PN T +S++ A ++ +L+ + ++ G+ NV +AL+
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 120 LSVKEARAVFDLMPHRDAV----SWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+KEA +F M + S+N ++ + K ++ L L + + G+K D +
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPA------------------- 216
I G + E + ++ +M++ G K N + ++++ A
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 217 ----------CSILESLRMGKEV-----------HCYGLRHRIGDLSSTTALVYMYAKCS 255
C +++ L K V + +GL+ + + TA++ K +
Sbjct: 571 LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQ---ANAAIFTAMIDGLCKDN 627
Query: 256 DLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFT 311
+ + +F+ M +K D A+ +++ N GN EAL L + M G+K + + +T
Sbjct: 628 QVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYT 687
Query: 312 GVLSGCSHSRLVDEGLQIFNSM 333
++ G SH + + M
Sbjct: 688 SLVWGLSHCNQLQKARSFLEEM 709
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/261 (20%), Positives = 113/261 (43%), Gaps = 13/261 (4%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ D+ L I + IE A+ V +++ + + + +T+L Y G P +GL
Sbjct: 503 IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGF---AVRHGMVENVFVCSALV 113
+ EM ++ VT ++ + K ++ KA+ F + G+ N + +A++
Sbjct: 563 HLLDEMKELDIEVTVVTFCVLIDGLCKNKLVS--KAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 114 SMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVK 169
+ V+ A +F+ M + D ++ ++ F + LAL +M+ G+K
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 170 ADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV 229
D + +++ G Q +++ L +M G P+E+ S+L L + E+
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Query: 230 HCYGLRHRIGDLSSTTALVYM 250
Y ++H++ + AL M
Sbjct: 741 QSYLMKHQLLTSDNDNALPNM 761
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 132/300 (44%), Gaps = 18/300 (6%)
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSI 213
E+ + FS+M R V + N ++ + G+T++ + M G +P T +I
Sbjct: 209 EEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY-NI 267
Query: 214 LPACSI----LESLR-MGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVF---- 264
+ C +E+ R + +E+ GL + D + +++ + K L+ + F
Sbjct: 268 MIDCMCKEGDVEAARGLFEEMKFRGL---VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 265 DMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVD 324
DM + DV+ +N +I G L + M +G+KPN V+++ ++ ++
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGAL 381
+ ++ + M R LV P+ Y+ ++D + G L +A++ M +E + AL
Sbjct: 385 QAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443
Query: 382 L-GACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGI 440
+ G C + E ++ K N +Y +L + V AK A ++ +K RGI
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 169/393 (43%), Gaps = 44/393 (11%)
Query: 15 YGKCKCIEGARRVFDDLV----GRDVVSWTSLSSCYVNCGLPRQGLAIFHEM-GWNGVKP 69
Y I AR VFDD+V +V ++ L + Y G L + M V P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 70 NAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVF 129
+ VT ++IL A S+ L+ K + ++G+V N + LV Y + S+KEA +
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 130 DLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMEN 185
+LM D ++N ++ +GL L M ++ D T+N +I GC E
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 186 GQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLR-MGKEVHCYGLRHRIGDLSST 244
G + E+ +++ +M+ G K N++T + SL+ + KE + ++ +L
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNI---------SLKWLCKEEKREAVTRKVKELVDM 409
Query: 245 TALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVK 304
D+V ++T+I A G+ AL + M + G+K
Sbjct: 410 HGF---------------------SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 305 PNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYK 364
N++T +L R +DE + NS + + D Y ++ F R ++++A +
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI-VDEVTYGTLIMGFFREEKVEKALE 507
Query: 365 F---IQRMPLEPTASAWGALLGACRVFKNVELA 394
++++ + PT S + +L+G ELA
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/354 (22%), Positives = 146/354 (41%), Gaps = 59/354 (16%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
D+V++ +L Y+ G L + EMG G+K N +T+++IL A + + L+ +
Sbjct: 415 DIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE 154
A + G + D V++ ++ +F ++ E
Sbjct: 475 NSAHKRGFI-------------------------------VDEVTYGTLIMGFFREEKVE 503
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
K L ++ M + + +T+N++IGG +G+TE ++E ++ + G P++ T +SI+
Sbjct: 504 KALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII 563
Query: 215 PACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSD--LNLSRNVFDMMPKK-- 270
+ E + ++H + T + + C + + N F+ + ++
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKP-DNYTCNILLNGLCKEGMTEKALNFFNTLIEERE 622
Query: 271 -DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
D V +NTMI A KEA L M G++P+ T+ +S + E ++
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDEL 682
Query: 330 -------FNSMGRDHLVEPDANH---------------YSCMVDVFSRAGRLDE 361
F SM RD VE + N YS ++D GRL E
Sbjct: 683 LKKFSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 102/231 (44%), Gaps = 23/231 (9%)
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL------PACSILESLRM 225
KA ++ + + G+ +L++ +KM ++ KPN +T +++L P+ + S R
Sbjct: 131 KALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAR- 189
Query: 226 GKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLN-----LSRNVFDMMPKKDVVAWNT 277
+ +IG ++ + LV Y L L R V + D V +NT
Sbjct: 190 ----EVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 278 MIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDH 337
++ A + G + L +M ++G+ PN VT+ ++ G + E QI M + +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTN 305
Query: 338 LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGAC 385
++ PD Y+ +++ AG + E + + M L+P + L+ C
Sbjct: 306 VL-PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 164/371 (44%), Gaps = 48/371 (12%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
++ S+ L C+ +C L+ F ++ G +P+ VT +++L ++ A+
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE 154
G+ V G +E V + +V + L P +++N ++
Sbjct: 200 GYMVETGFLEAVALFDQMVEI--------------GLTPV--VITFNTLINGLCLEGRVL 243
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
+ AL ++M +G+ D T+ ++ G + G T+ +L +L KM++ KP+ + S+I+
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 215 PACSILESLRMGKEVHCYGLRHRIGDL--SSTTALVYMY----------AKCSDLN-LSR 261
R+ K+ H ++ ++ V+ Y + SD L R
Sbjct: 304 D--------RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHS 320
++ + DV+ +N +I A+ G EA L + ML + P++VT+ ++ G C H+
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 321 RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF---IQRMPLEPTASA 377
R D+ +F+ M PD ++ ++DV+ RA R+DE + I R L +
Sbjct: 416 RF-DDAKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 378 WGALL-GACRV 387
+ L+ G C V
Sbjct: 470 YNTLIHGFCEV 480
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 166/373 (44%), Gaps = 48/373 (12%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGL 56
+ +VF N +I + A+R+ D++ R DV+++ +L S V G +
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ EM + P+ VT +S+ I+GF +H +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSM---------------IYGFC-KHNRFD------------ 418
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+A+ +FDLM D V++N ++ Y K ++G+ L +SR G+ A+ T+N
Sbjct: 419 -------DAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
+I G E + ++ ++M G P+ IT + +L E L E+
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 237 RIGDLSSTTALVYMYAKC--SDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKE 290
+I DL + + ++ C S ++ + ++F +P + DV +N MI +
Sbjct: 532 KI-DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
A +LF M +G +P++ T+ ++ GC + +D+ +++ + M R + DA +
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM-RSNGFSGDAFTIKMVA 649
Query: 351 DVFSRAGRLDEAY 363
D+ + GRLD+++
Sbjct: 650 DLITD-GRLDKSF 661
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 158/345 (45%), Gaps = 16/345 (4%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
DVV ++++ G +F EM G+ PN T + ++ + + +
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTN 150
+ + +V +AL+S + + EA + D M HR D V++N ++ + +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
++ +F M+ D T+N +I + +E +++LR++ + G N T
Sbjct: 415 NRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
++++ +++L +++ + H + D + L+Y + + L + +F+++
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 270 K----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVD 324
D VA+N +I EA LF ++ GV+P+ T+ ++SG C S + D
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ +F+ M +D+ EPD + Y+ ++ +AG +D++ + I M
Sbjct: 591 ANV-LFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 139/337 (41%), Gaps = 44/337 (13%)
Query: 87 LNSGKAIHGFAVRHG------MVENVFVCSALV----SMYARCLSVKEARAVFDLM---- 132
LNS + IHG G + + F L S Y + S+ +A FD M
Sbjct: 44 LNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFK--SLDDAIDFFDYMVRSR 101
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P AV N V+ + + ++L+ +M + + ++N +I + + SL
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS--------- 243
K+ K+GF+P+ +T +++L + + R+ + + +G G L +
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLLHGLCLED--RISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 244 ---TTALVYMYAKCSDLNLSRNVFD-------MMPKK---DVVAWNTMIIANAMHGNGKE 290
T ++ + L L V + M+ K DVV + T++ G+ K
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
AL L M + +KP+ V ++ ++ + +F+ M + + P+ Y+CM+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMI 338
Query: 351 DVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGA 384
D F GR +A + ++ M + P + AL+ A
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 163/356 (45%), Gaps = 14/356 (3%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
D+ +L++ Y IE A +FD ++G +VV++T+L C + +F
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
++MG NG +PN VT ++++ E+ + ++ + NV +AL+ + +
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 120 LSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+ EA+ ++++M + D ++ ++ ++ +F M R G ++ +
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEV-HCYGL 234
+I G ++ + E+ +++ +M + G N IT + ++ ++ + +EV +
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 235 RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD----VVAWNTMIIANAMHGNGKE 290
R D+ + L+ + + +F+ M K++ +V + +I G ++
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY 346
A LF ++ G+KPN +T+T ++SG L+ E +F M D + P+ + Y
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFL-PNESVY 506
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 158/360 (43%), Gaps = 42/360 (11%)
Query: 56 LAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSM 115
+++F +M G+ P T + ++ G ++ G ++ ++L++
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 116 YARCLSVKEARAVFDLMP----HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
Y +++A A+FD + + V++ ++ N+ + LF++M G + +
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
T+NA++ G E G+ ++ +LR M K +PN IT ++++ A + L KE++
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY- 281
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
++ + +V+ DV + ++I M+G EA
Sbjct: 282 ------------------------NVMIQMSVY-----PDVFTYGSLINGLCMYGLLDEA 312
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
+F M R+G PN V +T ++ G S+ V++G++IF M + +V + Y+ ++
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTVLIQ 371
Query: 352 VFSRAGRLDEAYKFIQRMP---LEPTASAWGALL-GAC---RVFKNVELAKIAAKKLFDI 404
+ GR D A + +M P + LL G C +V K + + + K+ DI
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 142/334 (42%), Gaps = 47/334 (14%)
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
L +A +F M H + + +L+ Y+ ++LF +M G+ T
Sbjct: 62 LQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N V+ + Q + L KM K+GF+P+ +T +S+L +C+
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG-------------YCHW-- 166
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLF 295
+RI D + L + M K +VV + T+I + + A+ LF
Sbjct: 167 NRIED---------------AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 296 ENMLRSGVKPNSVTFTGVLSG-CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
M +G +PN VT+ +++G C R D + + M R +EP+ ++ ++D F
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRR--IEPNVITFTALIDAFV 269
Query: 355 RAGRLDEA---YKFIQRMPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPN---- 407
+ G+L EA Y + +M + P +G+L+ ++ ++ A+ + + +E N
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR---QMFYLMERNGCYP 326
Query: 408 NPGNYVSLFNILVSAKLWSEASQIRILMKDRGIT 441
N Y +L + +K + +I M +G+
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 169/387 (43%), Gaps = 49/387 (12%)
Query: 46 YVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELK-DLNSGKAIHGFAVRHGMVE 104
Y L + L+I H +G P ++ +++L A K +++ + + + +
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203
Query: 105 NVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALF 160
NVF + L+ + ++ A +FD M + + V++N ++ Y ++ + G L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 161 SRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSIL 220
M+ +G++ + ++N VI G G+ +E +L +M + G+ +E+T ++++
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 221 ESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMM------PKK--- 270
+ +H LRH + + + T+L++ K ++N + D M P +
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 271 ------------------------------DVVAWNTMIIANAMHGNGKEALLLFENMLR 300
VV +N +I + + G ++A+ + E+M
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
G+ P+ V+++ VLSG S VDE L++ M ++PD YS ++ F R
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG-IKPDTITYSSLIQGFCEQRRTK 502
Query: 361 EA---YKFIQRMPLEPTASAWGALLGA 384
EA Y+ + R+ L P + AL+ A
Sbjct: 503 EACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 154/354 (43%), Gaps = 52/354 (14%)
Query: 36 VVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHG 95
V+++TSL G + + +M G+ PN T ++++ S+ +N +
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 96 FAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNK 151
+G +V +AL++ + +++A AV + M + D VS++ VL+ + +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 152 EYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITIS 211
+ ++ L + M +G+K D T++++I G E +T+E+ ++ +M ++G P+E T +
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYT 524
Query: 212 SILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKD 271
+++ A +C GDL L L + + D
Sbjct: 525 ALINA-------------YCME-----GDLEKA------------LQLHNEMVEKGVLPD 554
Query: 272 VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSR---------- 321
VV ++ +I +EA L + P+ VT+ ++ CS+
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614
Query: 322 -----LVDEGLQIFNSM-GRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
++ E Q+F SM G++H +PD Y+ M+ RAG + +AY + M
Sbjct: 615 FCMKGMMTEADQVFESMLGKNH--KPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 150/353 (42%), Gaps = 28/353 (7%)
Query: 25 RRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSEL 84
R + D+ VV++ +L + + G +A+ +M G+ P+ V+ S++L
Sbjct: 404 REMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS 463
Query: 85 KDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPH----RDAVSW 140
D++ + V G+ + S+L+ + KEA +++ M D ++
Sbjct: 464 YDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTY 523
Query: 141 NGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQK 200
++ AY + EK L L + M +GV D T++ +I G + +T E+ +L K+
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 201 MGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLS 260
P+++T +++ CS +E S +L+ + + +
Sbjct: 584 EESVPSDVTYHTLIENCSNIE-------------------FKSVVSLIKGFCMKGMMTEA 624
Query: 261 RNVFDMM----PKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
VF+ M K D A+N MI + G+ ++A L++ M++SG ++VT ++
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 317 CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
V+E + + R + +A +V++ R G +D + M
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELS-EAEQAKVLVEINHREGNMDVVLDVLAEM 736
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/443 (22%), Positives = 184/443 (41%), Gaps = 42/443 (9%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
DV ++T + + GL Q F+EM G PN VT ++++ A + K ++ +
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM-PHRDAVSWNGVLTAYFTNKEY 153
+ G + N+ SAL+ + + V++A +F+ M +D + Y N E
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE- 635
Query: 154 EKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSI 213
+ + T+ A++ G ++ + EE+ ++L M G +PN+I ++
Sbjct: 636 ---------------RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDAL 680
Query: 214 LPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK-- 270
+ + L +EV H L + ++L+ Y K +L+ V M +
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 271 --DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQ 328
+VV + MI G EA L + M G +PN VT+T ++ G ++ L+
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 329 IFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE--PTASAWGALLGACR 386
+ MG V P+ Y ++D + G LD A+ ++ M PT +A G +
Sbjct: 801 LLERMGSKG-VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA-----GYRK 854
Query: 387 VFKNVELAKIAAKKLFD-IEPNNPGNYVSLFNILV-----------SAKLWSEASQIRIL 434
V + I + L D I ++ ++S++ +L+ + +L E +
Sbjct: 855 VIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 435 MKDRGITKTPGCSWLQVGNRVHT 457
+ D T L + N+V T
Sbjct: 915 LVDYSSTYNSLIESLCLANKVET 937
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 154/397 (38%), Gaps = 48/397 (12%)
Query: 18 CKCIEGARRVFDDLVGRDVV----SWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVT 73
C ++ A + + +++ VV + +S + C + G + ++ EM G P+ T
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 74 VSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMP 133
S +L + + R G+V +V+ + +V + + +++AR F+ M
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 134 H----RDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTE 189
+ V++ ++ AY K+ LF M EG + T++A+I G + GQ E
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVY 249
+ AC I E + K+V + + D +S V
Sbjct: 606 K-------------------------ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 250 MYAKCSD-------LNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLLFENM 298
Y D + +R + D M + + + ++ +I G EA + M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 299 LRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGR 358
G T++ ++ + D ++ + M + P+ Y+ M+D + G+
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA-PNVVIYTEMIDGLCKVGK 759
Query: 359 LDEAYKFIQRMP---LEPTASAWGALLGACRVFKNVE 392
DEAYK +Q M +P + A++ + +E
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIE 796
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/422 (19%), Positives = 169/422 (40%), Gaps = 62/422 (14%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLA 57
T +V ALIHAY K K + A +F+ ++ ++V++++L + G +
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 58 IFHEM----------------GWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHG 101
IF M N +PN VT ++L + + + + G
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 102 MVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGL 157
N V AL+ + + EA+ V M +++ ++ YF K +
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 158 ALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
+ S+M + + +I G + G+T+E+ ++++ M++ G +PN +T ++++
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 218 SILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNT 277
++ GK C L R+G S+ V + V +
Sbjct: 790 GMI-----GKIETCLELLERMG--------------------SKGV-----APNYVTYRV 819
Query: 278 MIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDH 337
+I +G A L E M ++ ++ + V+ G + + E L + + +G+D
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ESLGLLDEIGQDD 877
Query: 338 LVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP-----LEPTASAWGALLGACRVFKNVE 392
P + Y ++D +A RL+ A + ++ + L +S + +L+ + + VE
Sbjct: 878 -TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVE 936
Query: 393 LA 394
A
Sbjct: 937 TA 938
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 117/283 (41%), Gaps = 35/283 (12%)
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
D V + +++ +E+ + +RM + T++ ++ GC+ Q +L
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 196 RKMQKMGFKPNEITISSILPA-CSILESLRMGKEVHCYGLRHRI---GDLSSTTAL-VYM 250
M G P+ +S++ A C+ G + Y L ++ G + + +
Sbjct: 361 NMMMMEGCYPSPKIFNSLVHAYCT------SGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 251 YAKCSDLN-LSRNVFDMMPKKDVVAWNTMIIANAM---------------HGNGKEALLL 294
+ C D + L+ ++ D+ K A++ M+ A + G ++A +
Sbjct: 415 GSICGDKDSLNCDLLDLAEK----AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSV 470
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
M+ G P++ T++ VL+ ++ ++ +F M R LV D Y+ MVD F
Sbjct: 471 IREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV-ADVYTYTIMVDSFC 529
Query: 355 RAGRLDEAYKFIQRMP---LEPTASAWGALLGACRVFKNVELA 394
+AG +++A K+ M P + AL+ A K V A
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 185/436 (42%), Gaps = 51/436 (11%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFH 60
+F N L+ A K K + + + + + ++ ++ L +C+ LA+
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 61 EMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCL 120
+M G +P+ VT+SS+L K ++ A+ V G + + L+
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 121 SVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
EA A+ D M R + V++ V+ + + L ++M ++A+ ++
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
VI + +++L + +M+ G +PN IT SS++ E + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 237 RIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEA 291
+I ++ + AL+ + K L + ++D M K+ D+ ++++I MH EA
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 384
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHL------------- 338
+FE M+ PN VT+ +++G ++ +DEG+++F M + L
Sbjct: 385 KHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHG 444
Query: 339 ---------------------VEPDANHYSCMVDVFSRAGRLDEA---YKFIQRMPLEPT 374
V P+ Y+ ++D + G+L++A ++++QR +EPT
Sbjct: 445 FFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504
Query: 375 ASAWGALL-GACRVFK 389
+ ++ G C+ K
Sbjct: 505 IYTYNIMIEGMCKAGK 520
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 142/323 (43%), Gaps = 43/323 (13%)
Query: 55 GLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVS 114
L +F EM GV+PN +T SS++ + + + + + NV +AL+
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 115 MYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKA 170
+ + + EA ++D M R D +++ ++ + + ++ +F M +
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 171 DKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVH 230
+ T+N +I G + + +E +E+ R+M + G
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGL--------------------------- 431
Query: 231 CYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHG 286
+G+ + T L++ + + D + ++ VF M +++ +NT++ +G
Sbjct: 432 -------VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 287 NGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY 346
++A+++FE + RS ++P T+ ++ G + V++G +F S+ V+PD Y
Sbjct: 485 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIIY 543
Query: 347 SCMVDVFSRAGRLDEAYKFIQRM 369
+ M+ F R G +EA ++M
Sbjct: 544 NTMISGFCRKGLKEEADALFRKM 566
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 150/325 (46%), Gaps = 19/325 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGL 56
+ ++V + + +I + K + + A +F ++ V +V++++SL SC N
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + PN VT ++++ A + L + ++ ++ + ++F S+L++ +
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 117 ARCLSVKEARAVFDLMPHRD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ EA+ +F+LM +D V++N ++ + K ++G+ LF MS+ G+ +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
T+ +I G + + + + ++M G PN +T +++L L V Y
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 233 GLRHRIGDLSSTTALVYMYAKCS--------DLNLSRNVFDMMPKKDVVAWNTMIIANAM 284
R ++ + + T + + C DL S ++ + P DV+ +NTMI
Sbjct: 496 LQRSKM-EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP--DVIIYNTMISGFCR 552
Query: 285 HGNGKEALLLFENMLRSGVKPNSVT 309
G +EA LF M G P+S T
Sbjct: 553 KGLKEEADALFRKMREDGPLPDSGT 577
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 125/293 (42%), Gaps = 37/293 (12%)
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P +N +L+A K+++ ++L +M R G+ + T+N +I Q +L
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYA 252
+L KM K+G++P+ +T+SS+L +C+G R +S ALV
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNG-------------YCHGKR-----ISDAVALV---- 178
Query: 253 KCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ +M + D + + T+I +H EA+ L + M++ G +PN VT+
Sbjct: 179 --------DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP-- 370
V++G +D + N M +E + YS ++D + D+A M
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 371 -LEPTASAWGALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
+ P + +L+ N E A++ L D+ V FN L+ A
Sbjct: 290 GVRPNVITYSSLISC---LCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 175/398 (43%), Gaps = 24/398 (6%)
Query: 9 NALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
++L++ Y K I A + D +V D +++T+L + +A+ M
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
G +PN VT ++ + D++ + + NV + S ++ + +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 125 ARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIG 180
A +F M ++ + ++++ +++ + + L S M + + T+NA+I
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 181 GCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL---RHR 237
++ G+ E+ ++ +M K P+ T SS++ + + L K H + L +
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK--HMFELMISKDC 396
Query: 238 IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHG-----NGKEAL 292
++ + L+ + K ++ +F M ++ +V NT+ +HG + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQ 455
Query: 293 LLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDV 352
++F+ M+ GV PN +T+ +L G + +++ + +F + R + EP Y+ M++
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM-EPTIYTYNIMIEG 514
Query: 353 FSRAGRLDEAYKFIQRMPL---EPTASAWGALL-GACR 386
+AG++++ + + L +P + ++ G CR
Sbjct: 515 MCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCR 552
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 164/371 (44%), Gaps = 48/371 (12%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
++ S+ L C+ +C L+ F ++ G +P+ VT +++L ++ A+
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE 154
G+ V G +E V + +V + L P +++N ++
Sbjct: 200 GYMVETGFLEAVALFDQMVEI--------------GLTPV--VITFNTLINGLCLEGRVL 243
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
+ AL ++M +G+ D T+ ++ G + G T+ +L +L KM++ KP+ + S+I+
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 215 PACSILESLRMGKEVHCYGLRHRIGDL--SSTTALVYMY----------AKCSDLN-LSR 261
R+ K+ H ++ ++ V+ Y + SD L R
Sbjct: 304 D--------RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLR 355
Query: 262 NVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHS 320
++ + DV+ +N +I A+ G EA L + ML + P++VT+ ++ G C H+
Sbjct: 356 DMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHN 415
Query: 321 RLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKF---IQRMPLEPTASA 377
R D+ +F D + PD ++ ++DV+ RA R+DE + I R L +
Sbjct: 416 RF-DDAKHMF-----DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 378 WGALL-GACRV 387
+ L+ G C V
Sbjct: 470 YNTLIHGFCEV 480
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/418 (21%), Positives = 180/418 (43%), Gaps = 55/418 (13%)
Query: 54 QGLAIFHEMGWNGVKPNAVTVSSILPA-CSELKDLNSGKAIHGFAVRHGMVENVFVCSAL 112
+ +A+F +M G+ P +T ++++ C E + L + ++ V G+ +V +
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVTYGTI 267
Query: 113 VSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGV 168
V+ + K A + M D V ++ ++ + + LFS M +G+
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGI 327
Query: 169 KADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKE 228
+ T+N +I G G+ ++ +LR M + P+ +T ++++ A S+ E E
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA-SVKEGKLFEAE 386
Query: 229 VHCYGLRHR--IGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMI------- 279
C + HR D + +++Y + K + + ++++FD+M DVV +NT+I
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 280 -----------------IANA------MHG-----NGKEALLLFENMLRSGVKPNSVTFT 311
+AN +HG N A LF+ M+ GV P+++T
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 312 GVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPL 371
+L G + ++E L++F + ++ D Y+ ++ + ++DEA+ +P+
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSK-IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 372 ---EPTASAWGALLGACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFNILVSAKL 424
EP + ++ + A + K+ D EP+N S +N L+ L
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDN-----STYNTLIRGCL 618
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 158/345 (45%), Gaps = 16/345 (4%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
DVV ++++ G +F EM G+ PN T + ++ + + +
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTN 150
+ + +V +AL+S + + EA + D M HR D V++N ++ + +
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 151 KEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITI 210
++ +F M+ D T+N +I + +E +++LR++ + G N T
Sbjct: 415 NRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 211 SSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPK 269
++++ +++L +++ + H + D + L+Y + + L + +F+++
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQM 530
Query: 270 K----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSG-CSHSRLVD 324
D VA+N +I EA LF ++ GV+P+ T+ ++SG C S + D
Sbjct: 531 SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 325 EGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ +F+ M +D+ EPD + Y+ ++ +AG +D++ + I M
Sbjct: 591 ANV-LFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 157/343 (45%), Gaps = 11/343 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVN--CGLPRQGLA- 57
+ DV + +A+I K A+ +F +++ + + +C ++ C R A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 58 -IFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M + P+ +T ++++ A + L + + + + + ++++ +
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 117 ARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWN 176
+ +A+ +FDLM D V++N ++ Y K ++G+ L +SR G+ A+ T+N
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 177 AVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRH 236
+I G E + ++ ++M G P+ IT + +L E L E+
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 237 RIGDLSSTTALVYMYAKC--SDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKE 290
+I DL + + ++ C S ++ + ++F +P + DV +N MI +
Sbjct: 532 KI-DLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISD 590
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSM 333
A +LF M +G +P++ T+ ++ GC + +D+ +++ + M
Sbjct: 591 ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 139/337 (41%), Gaps = 44/337 (13%)
Query: 87 LNSGKAIHGFAVRHG------MVENVFVCSALV----SMYARCLSVKEARAVFDLM---- 132
LNS + IHG G + + F L S Y + S+ +A FD M
Sbjct: 44 LNSRRLIHGRVAEKGTKSLPSLTQVTFEGEELKLKSGSHYFK--SLDDAIDFFDYMVRSR 101
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL 192
P AV N V+ + + ++L+ +M + + ++N +I + + SL
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 193 EMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSS--------- 243
K+ K+GF+P+ +T +++L + + R+ + + +G G L +
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLLHGLCLED--RISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 244 ---TTALVYMYAKCSDLNLSRNVFD-------MMPKK---DVVAWNTMIIANAMHGNGKE 290
T ++ + L L V + M+ K DVV + T++ G+ K
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 291 ALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMV 350
AL L M + +KP+ V ++ ++ + +F+ M + + P+ Y+CM+
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMI 338
Query: 351 DVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLGA 384
D F GR +A + ++ M + P + AL+ A
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 184/433 (42%), Gaps = 51/433 (11%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
T ++ L+ +L+ A KC E A V V DV +T+ + + G + + +F +
Sbjct: 228 TCNILLT-SLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 285
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M GV PN VT ++++ + V GM + S LV R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 122 VKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
+ +A V M + + + +N ++ ++ K + + M +G+ +T+N
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----------------------- 214
+I G +NGQ + + +L++M +GF N+ + +S++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 215 --PACSILESL-----RMGKEVHCYGL------RHRIGDLSSTTALVYMYAKCSDLN--- 258
P +L +L + GK L + + D ++ AL++ + L+
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 259 -LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
+ + + D V++NT+I EA + + M++ G+KP++ T++ ++ G
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPT 374
+ V+E +Q ++ R+ ++ PD YS M+D +A R +E +F M ++P
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 375 ASAWGALLGA-CR 386
+ L+ A CR
Sbjct: 645 TVVYNHLIRAYCR 657
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
D VS+N +++ K+ ++ M + G+K D T++ +I G + EE+++
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCS 255
++ G P+ T S ++ C E G+E
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF------------------------- 633
Query: 256 DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLS 315
D +S+NV + + V +N +I A G AL L E+M G+ PNS T+T ++
Sbjct: 634 DEMMSKNV-----QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 316 GCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLE 372
G S V+E +F M + L EP+ HY+ ++D + + G++ + ++ M +
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGL-EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 373 PTASAWGALLGA 384
P + ++G
Sbjct: 748 PNKITYTVMIGG 759
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 46/325 (14%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSL-SSCYVNCGLPR--QGL 56
D SNAL+H + ++ A R+ +++GR D VS+ +L S C CG + +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC---CGKKKLDEAF 560
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
EM G+KP+ T S ++ + + R+GM+ +V+ S ++
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 117 ARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ +E + FD M + + V +N ++ AY + L L M +G+ +
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
AT+ ++I G + EE+ + +M+ G +PN ++++ Y
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG---------------Y 725
Query: 233 GLRHRIGDLSSTTALVY-MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
G ++G + L+ M++K ++ P K + + MI A GN EA
Sbjct: 726 G---KLGQMVKVECLLREMHSK-----------NVHPNK--ITYTVMIGGYARDGNVTEA 769
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSG 316
L M G+ P+S+T+ + G
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYG 794
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 145/353 (41%), Gaps = 12/353 (3%)
Query: 40 TSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR 99
T+L S G + L ++ + G + T +++L E L+ I +
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 100 HGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEK 155
G V + + L+S + EA D M R D +++ ++ F + E+
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 156 GLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
+ + R G+ D T++ +I GC + +TEE E +M +PN + + ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 216 ACSILESLRMGKEVHCYGLRHR-IGDLSST-TALVYMYAKCSDLNLSRNVFDMMP----K 269
A L M E+ ++H+ I S+T T+L+ + S + ++ +F+ M +
Sbjct: 654 AYCRSGRLSMALELR-EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
+V + +I G + L M V PN +T+T ++ G + V E ++
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 330 FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
N M R+ + PD+ Y + + + G + EA+K W L+
Sbjct: 773 LNEM-REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLI 824
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDV----VSWTSLSSCYVNCGLPRQGL 56
M DV+ + +I K + E + FD+++ ++V V + L Y G L
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M G+ PN+ T +S++ S + + K + G+ NVF +AL+ Y
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 117 ARCLSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ + + + M H + +++ ++ Y + + L + M +G+ D
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 173 ATWNAVIGGCMENGQTEESLE 193
T+ I G ++ G E+ +
Sbjct: 786 ITYKEFIYGYLKQGGVLEAFK 806
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/433 (21%), Positives = 184/433 (42%), Gaps = 51/433 (11%)
Query: 2 TSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHE 61
T ++ L+ +L+ A KC E A V V DV +T+ + + G + + +F +
Sbjct: 228 TCNILLT-SLVRANEFQKCCE-AFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSK 285
Query: 62 MGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
M GV PN VT ++++ + V GM + S LV R
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345
Query: 122 VKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNA 177
+ +A V M + + + +N ++ ++ K + + M +G+ +T+N
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405
Query: 178 VIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----------------------- 214
+I G +NGQ + + +L++M +GF N+ + +S++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 215 --PACSILESL-----RMGKEVHCYGL------RHRIGDLSSTTALVYMYAKCSDLN--- 258
P +L +L + GK L + + D ++ AL++ + L+
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525
Query: 259 -LSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
+ + + D V++NT+I EA + + M++ G+KP++ T++ ++ G
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPT 374
+ V+E +Q ++ R+ ++ PD YS M+D +A R +E +F M ++P
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGML-PDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 375 ASAWGALLGA-CR 386
+ L+ A CR
Sbjct: 645 TVVYNHLIRAYCR 657
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 109/252 (43%), Gaps = 34/252 (13%)
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
D VS+N +++ K+ ++ M + G+K D T++ +I G + EE+++
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCS 255
++ G P+ T S ++ C E G+E
Sbjct: 599 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF------------------------- 633
Query: 256 DLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLS 315
D +S+NV + + V +N +I A G AL L E+M G+ PNS T+T ++
Sbjct: 634 DEMMSKNV-----QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIK 688
Query: 316 GCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLE 372
G S V+E +F M + L EP+ HY+ ++D + + G++ + ++ M +
Sbjct: 689 GMSIISRVEEAKLLFEEMRMEGL-EPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 373 PTASAWGALLGA 384
P + ++G
Sbjct: 748 PNKITYTVMIGG 759
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 46/325 (14%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSL-SSCYVNCGLPR--QGL 56
D SNAL+H + ++ A R+ +++GR D VS+ +L S C CG + +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGC---CGKKKLDEAF 560
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
EM G+KP+ T S ++ + + R+GM+ +V+ S ++
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGC 620
Query: 117 ARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ +E + FD M + + V +N ++ AY + L L M +G+ +
Sbjct: 621 CKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNS 680
Query: 173 ATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCY 232
AT+ ++I G + EE+ + +M+ G +PN ++++ Y
Sbjct: 681 ATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG---------------Y 725
Query: 233 GLRHRIGDLSSTTALVY-MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEA 291
G ++G + L+ M++K ++ P K + + MI A GN EA
Sbjct: 726 G---KLGQMVKVECLLREMHSK-----------NVHPNK--ITYTVMIGGYARDGNVTEA 769
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSG 316
L M G+ P+S+T+ + G
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYG 794
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 145/353 (41%), Gaps = 12/353 (3%)
Query: 40 TSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVR 99
T+L S G + L ++ + G + T +++L E L+ I +
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533
Query: 100 HGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEK 155
G V + + L+S + EA D M R D +++ ++ F + E+
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEE 593
Query: 156 GLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
+ + R G+ D T++ +I GC + +TEE E +M +PN + + ++
Sbjct: 594 AIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIR 653
Query: 216 ACSILESLRMGKEVHCYGLRHR-IGDLSST-TALVYMYAKCSDLNLSRNVFDMMP----K 269
A L M E+ ++H+ I S+T T+L+ + S + ++ +F+ M +
Sbjct: 654 AYCRSGRLSMALELR-EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLE 712
Query: 270 KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
+V + +I G + L M V PN +T+T ++ G + V E ++
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 330 FNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWGALL 382
N M R+ + PD+ Y + + + G + EA+K W L+
Sbjct: 773 LNEM-REKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENYAAIIEGWNKLI 824
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDV----VSWTSLSSCYVNCGLPRQGL 56
M DV+ + +I K + E + FD+++ ++V V + L Y G L
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+ +M G+ PN+ T +S++ S + + K + G+ NVF +AL+ Y
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGY 725
Query: 117 ARCLSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADK 172
+ + + + M H + +++ ++ Y + + L + M +G+ D
Sbjct: 726 GKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDS 785
Query: 173 ATWNAVIGGCMENGQTEESLE 193
T+ I G ++ G E+ +
Sbjct: 786 ITYKEFIYGYLKQGGVLEAFK 806
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 46/351 (13%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIF 59
D+ NA+I + K K + A F ++ + +VV++T+L + N +
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
+M + PN +T S++L A + + K + VR + ++ S+L++
Sbjct: 249 SDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLH 308
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+ EA +FDLM + D VS+N ++ + K E G+ LF MS+ G+ ++ T+
Sbjct: 309 DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTY 368
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLR 235
N +I G + G +++ E +M G P+ T + +L GL
Sbjct: 369 NTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLG-----------------GLC 411
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEA 291
G+L ALV +F+ M K+ D+V + T+I G +EA
Sbjct: 412 DN-GELEK--ALV--------------IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPD 342
LF ++ G+KP+ VT+T ++SG L+ E ++ M ++ L++ D
Sbjct: 455 WSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 183/419 (43%), Gaps = 45/419 (10%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
D+ ++ + +C+ C L+I +M G +P+ VT+ S+ ++
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSL---------------VN 163
Query: 95 GFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVLTAYFTNKEYE 154
GF R+ + + V + +V + + D V++N ++ + K
Sbjct: 164 GFCRRNRVSDAVSLVDKMVEIGYK----------------PDIVAYNAIIDSLCKTKRVN 207
Query: 155 KGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL 214
F + R+G++ + T+ A++ G + + ++ +L M K PN IT S++L
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 215 PACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSDLNLSRNVFDMMPKK--- 270
A + KE+ +R I D+ + ++L+ ++ + +FD+M K
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 271 -DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQI 329
DVV++NT+I ++ + LF M + G+ N+VT+ ++ G + VD+ +
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 330 FNSMGRDHL-VEPDANHYSCMVDVFSRAGRLDEA---YKFIQRMPLEPTASAWGALL-GA 384
F+ M D + PD Y+ ++ G L++A ++ +Q+ ++ + ++ G
Sbjct: 388 FSQM--DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 385 CRVFKNVEL-AKIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEASQIRILMKDRGITK 442
C+ K E + + L ++P + Y ++ + L + L E + MK G+ K
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKP-DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/370 (20%), Positives = 169/370 (45%), Gaps = 32/370 (8%)
Query: 34 RDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKD----LNS 89
R+ +S T L +N + +F +M + P+ V + +L A +LK ++
Sbjct: 53 RERLSKTRLRDIKLN-----DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISL 107
Query: 90 GKAIHGFAVRHGM-----VENVFVCSALVSMYARCLSVKEARAVFDLMPHRDAVSWNGVL 144
GK + +R+ + V N F C VS+ L + L D V+ ++
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILG-----KMLKLGYEPDRVTIGSLV 162
Query: 145 TAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFK 204
+ ++L +M G K D +NA+I + + ++ + +++++ G +
Sbjct: 163 NGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIR 222
Query: 205 PNEITISSILPACSILESLRMGKEVHCYG--LRHRIG-DLSSTTALVYMYAKCSDLNLSR 261
PN +T ++++ + S R ++ +I ++ + +AL+ + K + ++
Sbjct: 223 PNVVTYTALVNG--LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAK 280
Query: 262 NVFDMMPK----KDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
+F+ M + D+V ++++I +H EA +F+ M+ G + V++ +++G
Sbjct: 281 ELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGF 340
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPT 374
++ V++G+++F M + LV + Y+ ++ F +AG +D+A +F +M + P
Sbjct: 341 CKAKRVEDGMKLFREMSQRGLVS-NTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 375 ASAWGALLGA 384
+ LLG
Sbjct: 400 IWTYNILLGG 409
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/434 (23%), Positives = 189/434 (43%), Gaps = 27/434 (6%)
Query: 11 LIHAYGKCKCIEGARRVF----DDLVGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
LIH + I+ A +F DD V ++T L + L + EM G
Sbjct: 294 LIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETG 353
Query: 67 VKPNAVTVSSILPA-CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEA 125
+KPN T + ++ + CS+ K + + G + G++ NV +AL++ Y + +++A
Sbjct: 354 IKPNIHTYTVLIDSLCSQCK-FEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 126 RAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGG 181
V +LM R + ++N ++ Y K + + ++M V D T+N++I G
Sbjct: 413 VDVVELMESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 182 CMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-- 239
+G + + +L M G P++ T +S++ S+ +S R+ + + + G
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMID--SLCKSKRVEEACDLFDSLEQKGVN 529
Query: 240 -DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDV----VAWNTMIIANAMHGNGKEALLL 294
++ TAL+ Y K ++ + + + M K+ + +N +I G KEA LL
Sbjct: 530 PNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLL 589
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
E M++ G++P T T ++ D F M +PDA+ Y+ + +
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG-TKPDAHTYTTFIQTYC 648
Query: 355 RAGRLDEAYKFIQRMP---LEPTASAWGALLGACRVFKNVELAKIAAKKLFDI--EPNNP 409
R GRL +A + +M + P + +L+ A K++ D EP+
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ- 707
Query: 410 GNYVSLFNILVSAK 423
++SL L+ K
Sbjct: 708 HTFLSLIKHLLEMK 721
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 162/374 (43%), Gaps = 45/374 (12%)
Query: 98 VRHGMVENVFVCSALVSMYARCLSVKEARAVFDL-----MPHRDAVSWNGVLTAYFT--N 150
+ +G V VF L M C SV +A V DL R + + ++ Y T N
Sbjct: 134 INNGYVGVVFKIRLL--MIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLN 191
Query: 151 KEYEKGLA-----LFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKP 205
GL ++ M + V + T+N ++ G + G EE+ + + K+ + G P
Sbjct: 192 SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDP 251
Query: 206 NEITISS-ILPACS---ILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSR 261
+ T +S I+ C + + ++ E+ G R + + T L++ ++ +
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR---NEVAYTHLIHGLCVARRIDEAM 308
Query: 262 NVFDMMPKKD----VVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVL-SG 316
++F M + V + +I + EAL L + M +G+KPN T+T ++ S
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 317 CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEP 373
CS + ++ ++ M L+ P+ Y+ +++ + + G +++A ++ M L P
Sbjct: 369 CSQCKF-EKARELLGQMLEKGLM-PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 374 TASAWGALL-GACRVFKNVELAKIAAKKLFD--IEPNNPGNYVSLFNILVSAKLWS---- 426
+ L+ G C+ NV A K+ + + P+ V +N L+ + S
Sbjct: 427 NTRTYNELIKGYCK--SNVHKAMGVLNKMLERKVLPD-----VVTYNSLIDGQCRSGNFD 479
Query: 427 EASQIRILMKDRGI 440
A ++ LM DRG+
Sbjct: 480 SAYRLLSLMNDRGL 493
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 20/368 (5%)
Query: 11 LIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
LI AYGK GA RV L +V+S+T+L Y G AIF M +G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAV---RHGMVENVFVCSALVSMYARCLSVK 123
+P+A+T IL E + + + + + + + ++ MY + + +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 124 EARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+AR VF M + V++N +++ + KE K ++ +M R ++ D ++ +I
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLI 328
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI- 238
+ EE+L + +M G +P + +L A +I + K V R RI
Sbjct: 329 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 388
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLL 294
DL S T ++ Y SD+ + F + + ++V + T+I A + ++ + +
Sbjct: 389 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 448
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
+E M SG+K N T ++ + L + M V PD + ++ + S
Sbjct: 449 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGVPPDQKAKNVLLSLAS 507
Query: 355 RAGRLDEA 362
L+EA
Sbjct: 508 TQDELEEA 515
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 138/326 (42%), Gaps = 44/326 (13%)
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM---- 132
++ A +L + N + + + G NV +AL+ Y R A A+F M
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRM---SREGVKADKATWNAVIGGCMENGQTE 189
P A+++ +L + ++++ +F + + +K D+ ++ +I + G E
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVY 249
++ ++ M G + +T +S++ S T+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLM---------------------------SFETS--- 301
Query: 250 MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVT 309
Y + S + D+ P DVV++ +I A +EAL +FE ML +GV+P
Sbjct: 302 -YKEVSKIYDQMQRSDIQP--DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ +L + S +V++ +F SM RD + PD Y+ M+ + A ++ A KF +R+
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDLWSYTTMLSAYVNASDMEGAEKFFKRI 417
Query: 370 PL---EPTASAWGALLGACRVFKNVE 392
+ EP +G L+ +VE
Sbjct: 418 KVDGFEPNIVTYGTLIKGYAKANDVE 443
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDV----VSWTSLSSCYVNCGLPRQGL 56
+ D + + +I+ Y K E AR+VF +VG+ V V++ SL S + ++
Sbjct: 250 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVS 306
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
I+ +M + ++P+ V+ + ++ A + ++ + G+ + L+ +
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 366
Query: 117 ARCLSVKEARAVFDLMPHRDAV-----SWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
A V++A+ VF M RD + S+ +L+AY + E F R+ +G + +
Sbjct: 367 AISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 425
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
T+ +I G + E+ +E+ KM+ G K N+ +++I+ A
Sbjct: 426 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 471
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 157/368 (42%), Gaps = 20/368 (5%)
Query: 11 LIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
LI AYGK GA RV L +V+S+T+L Y G AIF M +G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 67 VKPNAVTVSSILPACSELKDLNSGKAIHGFAV---RHGMVENVFVCSALVSMYARCLSVK 123
+P+A+T IL E + + + + + + + ++ MY + + +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 124 EARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
+AR VF M + V++N +++ + KE K ++ +M R ++ D ++ +I
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLI 321
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI- 238
+ EE+L + +M G +P + +L A +I + K V R RI
Sbjct: 322 KAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIF 381
Query: 239 GDLSSTTALVYMYAKCSDLNLSRNVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLL 294
DL S T ++ Y SD+ + F + + ++V + T+I A + ++ + +
Sbjct: 382 PDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEV 441
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
+E M SG+K N T ++ + L + M V PD + ++ + S
Sbjct: 442 YEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM-ESCGVPPDQKAKNVLLSLAS 500
Query: 355 RAGRLDEA 362
L+EA
Sbjct: 501 TQDELEEA 508
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 138/326 (42%), Gaps = 44/326 (13%)
Query: 77 ILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLM---- 132
++ A +L + N + + + G NV +AL+ Y R A A+F M
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 133 PHRDAVSWNGVLTAYFTNKEYEKGLALFSRM---SREGVKADKATWNAVIGGCMENGQTE 189
P A+++ +L + ++++ +F + + +K D+ ++ +I + G E
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 190 ESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIGDLSSTTALVY 249
++ ++ M G + +T +S++ S T+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLM---------------------------SFETS--- 294
Query: 250 MYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVT 309
Y + S + D+ P DVV++ +I A +EAL +FE ML +GV+P
Sbjct: 295 -YKEVSKIYDQMQRSDIQP--DVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 351
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
+ +L + S +V++ +F SM RD + PD Y+ M+ + A ++ A KF +R+
Sbjct: 352 YNILLDAFAISGMVEQAKTVFKSMRRDRIF-PDLWSYTTMLSAYVNASDMEGAEKFFKRI 410
Query: 370 PL---EPTASAWGALLGACRVFKNVE 392
+ EP +G L+ +VE
Sbjct: 411 KVDGFEPNIVTYGTLIKGYAKANDVE 436
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDV----VSWTSLSSCYVNCGLPRQGL 56
+ D + + +I+ Y K E AR+VF +VG+ V V++ SL S + ++
Sbjct: 243 LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSY---KEVS 299
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
I+ +M + ++P+ V+ + ++ A + ++ + G+ + L+ +
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAF 359
Query: 117 ARCLSVKEARAVFDLMPHRDAV-----SWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
A V++A+ VF M RD + S+ +L+AY + E F R+ +G + +
Sbjct: 360 AISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPN 418
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC 217
T+ +I G + E+ +E+ KM+ G K N+ +++I+ A
Sbjct: 419 IVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDAS 464
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/375 (21%), Positives = 167/375 (44%), Gaps = 41/375 (10%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGLAIF 59
DV LI A + + A ++ D++ R DVV++ L + G + +
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 60 HEMGWNGVKPNAVTVSSILPA-CSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
++M +G +PN +T + IL + CS + +++ K + +R G +V + L++ R
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNILINFLCR 356
Query: 119 CLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
+ A + + MP +++S+N +L + K+ ++ + RM G D T
Sbjct: 357 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
+N ++ ++G+ E+++E+L ++ G P IT ++++ + ++ + GK +
Sbjct: 417 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG--LAKAGKTGKAIK---- 470
Query: 235 RHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVAWNTMIIANAMHGNGKEALLL 294
L M AK D+ P D + +++++ + G EA+
Sbjct: 471 -----------LLDEMRAK-----------DLKP--DTITYSSLVGGLSREGKVDEAIKF 506
Query: 295 FENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFS 354
F R G++PN+VTF ++ G SR D + M + +P+ Y+ +++ +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETSYTILIEGLA 565
Query: 355 RAGRLDEAYKFIQRM 369
G EA + + +
Sbjct: 566 YEGMAKEALELLNEL 580
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 183 MENGQTEESLEMLRKMQKMGFKPNEITISSILPA-CSILESLRMGKEVHCYGLRHRIGDL 241
+ G+ EE + L M G P+ I ++++ C + ++ + K + + D+
Sbjct: 113 VRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 242 SSTTALVYMYAKCSDLNLSRNVFDMMP-KKDVVAWNTMIIANAMHGNGKEALLLFENMLR 300
+ ++ Y K ++N + +V D M DVV +NT++ + G K+A+ + + ML+
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 301 SGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLD 360
P+ +T+T ++ V +++ + M RD PD Y+ +V+ + GRLD
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 361 EAYKFIQRMP 370
EA KF+ MP
Sbjct: 292 EAIKFLNDMP 301
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/391 (22%), Positives = 168/391 (42%), Gaps = 57/391 (14%)
Query: 35 DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIH 94
D+V++ S+ + Y L R+ + EM GV PN V+ S++L E + K +
Sbjct: 259 DLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE-----NHKFLE 313
Query: 95 GFAVRHGMVE-----NVFVCSALVSMYARCLSVKEARAVF------DLMPHRDAVSWNGV 143
+V M E ++ C+ ++ +Y + VKEA +F D+ P + VS+N +
Sbjct: 314 ALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEP--NVVSYNTI 371
Query: 144 LTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGF 203
L Y + + + + LF M R+ ++ + T+N +I + + E++ ++++MQ G
Sbjct: 372 LRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGI 431
Query: 204 KPNEITISSILP----------ACSILESLR-MGKEV-------------------HCYG 233
+PN IT S+I+ A ++ + LR G E+ H
Sbjct: 432 EPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR 491
Query: 234 LRHRI---GDLSSTTALVYMYAKCSDLN----LSRNVFDMMPKKDVVAWNTMIIANAMHG 286
L H + ++ TA+ + AK + R F+ KD+ + MI + +
Sbjct: 492 LLHELKLPDNIPRETAITIL-AKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQ 550
Query: 287 NGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHY 346
+ +FE M +G P+S VL+ R ++ ++ M + V PD H+
Sbjct: 551 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF 610
Query: 347 SCMVDVFSRAGRLDEAYKFIQRMPLEPTASA 377
M+ ++S + QR+ +P ++
Sbjct: 611 Q-MLSLYSSKKDFEMVESLFQRLESDPNVNS 640
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 169/361 (46%), Gaps = 44/361 (12%)
Query: 152 EYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITIS 211
+Y K +++FSR+ R G+ D +N++I + E+ ++++M + G PN ++ S
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 212 SILPAC----SILESLRM---GKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVF 264
++L LE+L + KEV+C DL++ ++ +Y + + + +F
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNC------ALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 265 DMMPKKD----VVAWNTMIIANAMHGNGK---EALLLFENMLRSGVKPNSVTFTGVLSGC 317
+ K D VV++NT++ ++G + EA+ LF M R ++ N VT+ ++
Sbjct: 354 WSLRKMDIEPNVVSYNTIL---RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPT 374
+ ++ + M + +EP+A YS ++ ++ +AG+LD A Q++ +E
Sbjct: 411 GKTMEHEKATNLVQEM-QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Query: 375 ASAWGALLGACRVFKNVELAKIAAKKLFDIE-PNNPGNYVSLFNILVSAKLWSEASQIRI 433
+ ++ A ++ V L A + L +++ P+N ++ IL A EA+ +
Sbjct: 470 QVLYQTMIVA---YERVGLMGHAKRLLHELKLPDNIPRETAI-TILAKAGRTEEATWVFR 525
Query: 434 LMKDRGITKTPGCSWLQVGNRVHTFVVGDRSNTGSDKIYEFLDELGQKMKLAGYKPDTDY 493
+ G K G ++ + R Y + E+ +KM+ AGY PD++
Sbjct: 526 QAFESGEVKDISV----FGCMINLYSRNQR--------YVNVIEVFEKMRTAGYFPDSNV 573
Query: 494 V 494
+
Sbjct: 574 I 574
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 175/384 (45%), Gaps = 28/384 (7%)
Query: 2 TSDVFLSNALIHAYGKC----KCIEGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQGLA 57
T V LI+ Y K K +E +R + ++ V ++ +++ + + +V A
Sbjct: 481 TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFA 540
Query: 58 IFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFA----VRHGMVENVFVCSALV 113
+F +M G+KP+ + ++I+ A + +++ +AI +RH F+ ++
Sbjct: 541 VFEDMVKEGMKPDVILYNNIISAFCGMGNMD--RAIQTVKEMQKLRHRPTTRTFM--PII 596
Query: 114 SMYARCLSVKEARAVFDLMPHRDAV----SWNGVLTAYFTNKEYEKGLALFSRMSREGVK 169
YA+ ++ + VFD+M V ++NG++ ++ EK + + M+ GV
Sbjct: 597 HGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVS 656
Query: 170 ADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPAC----SILESLRM 225
A++ T+ ++ G G T ++ E ++Q G + T ++L AC + +L +
Sbjct: 657 ANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAV 716
Query: 226 GKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIA 281
KE+ R+ + L+ +A+ D+ + ++ M K+ D+ + + I A
Sbjct: 717 TKEMSA---RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISA 773
Query: 282 NAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP 341
+ G+ A E M GVKPN T+T ++ G + + L ++ L + M + ++P
Sbjct: 774 CSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM-KAMGIKP 832
Query: 342 DANHYSCMVDVFSRAGRLDEAYKF 365
D Y C++ + EAY +
Sbjct: 833 DKAVYHCLLTSLLSRASIAEAYIY 856
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/380 (18%), Positives = 166/380 (43%), Gaps = 34/380 (8%)
Query: 22 EGARRVFDDLVGRDVVSWTSLSSCYVNCGLPRQ---GLAI---------------FHEMG 63
EG+R+ ++ + +W ++ S + P + GL + F M
Sbjct: 277 EGSRKSLQRILDTNGDNWQAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMR 336
Query: 64 WNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVK 123
G+ P + +S++ A + +D++ + G+ ++ S +V +++ +
Sbjct: 337 ARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAE 396
Query: 124 EARAVFD----LMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI 179
A FD + +A + ++ A+ E+ AL M EG+ A A ++ ++
Sbjct: 397 AADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMM 456
Query: 180 GGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----PACSILESLRMGKEVHCYGLR 235
G ++ L + +++++ GF P +T ++ I ++L + + + G++
Sbjct: 457 DGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVK 516
Query: 236 HRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEA 291
H +L + + ++ + K D + VF+ M K+ DV+ +N +I A GN A
Sbjct: 517 H---NLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRA 573
Query: 292 LLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVD 351
+ + M + +P + TF ++ G + S + L++F+ M R V P + ++ +++
Sbjct: 574 IQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCV-PTVHTFNGLIN 632
Query: 352 VFSRAGRLDEAYKFIQRMPL 371
++++A + + M L
Sbjct: 633 GLVEKRQMEKAVEILDEMTL 652
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 161/398 (40%), Gaps = 27/398 (6%)
Query: 48 NCGLPRQGLAIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVF 107
C + R A+ EM G+ +++ + + D G + G V
Sbjct: 427 TCNMER-AEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 108 VCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRM 163
L+++Y + + +A V +M + +++ ++ + K++ A+F M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 164 SREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESL 223
+EG+K D +N +I G + +++ +++MQK+ +P T I+ + +
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 224 RMGKEVHCYGLRHRIG---DLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVVA----WN 276
R EV + + R G + + L+ + + + + D M V A +
Sbjct: 606 RRSLEV--FDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 277 TMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRD 336
++ A G+ +A F + G+ + T+ +L C S + L + M
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 337 HLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLE---PTASAWGALLGACRVFKNVEL 393
++ ++ Y+ ++D ++R G + EA IQ+M E P + + + AC ++
Sbjct: 724 NIPR-NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNR 782
Query: 394 A--KIAAKKLFDIEPNNPGNYVSLFNILVSAKLWSEAS 429
A I + ++PN + + L+ K W+ AS
Sbjct: 783 ATQTIEEMEALGVKPN-----IKTYTTLI--KGWARAS 813
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 159/331 (48%), Gaps = 22/331 (6%)
Query: 5 VFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCG--LPRQGLAI 58
V + NA++ Y + A+ + D + R D++S+ +L + + G P + +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
+ +G++P+A+T +++L ACS +L+ + H +++ +A++S+Y R
Sbjct: 285 LDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGR 344
Query: 119 CLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
C EA +F + + DAV++N +L A+ + EK ++ +M + G D+ T
Sbjct: 345 CGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMT 404
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKM-GFKPNEIT----ISSILPACSILESLRMGKEV 229
+N +I + GQ + +L++ + M+ + G P+ IT I S+ A +E+ + E+
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 230 HCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMM----PKKDVVAWNTMIIANAMH 285
G++ L + +AL+ YAK + + F M K D +A++ M+
Sbjct: 465 LDVGIK---PTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRG 521
Query: 286 GNGKEALLLFENMLRSGVKPNSVTFTGVLSG 316
++A L+ +M+ G P+ + ++ G
Sbjct: 522 NETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 204/482 (42%), Gaps = 58/482 (12%)
Query: 11 LIHAYGKCKCIEGARRVFDDL--VGR--DVVSWTSLSSCYVNCGLPRQGLAIFHEMGWNG 66
+I AYGK K + A V +L GR D+ +W SL S Y CG + AIF+ M +G
Sbjct: 758 IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDG 817
Query: 67 VKPNAVTVSSILPA-------------CSELKDLN----------------------SGK 91
P +++ +L A EL+D+ K
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVK 877
Query: 92 AIHGFAVRHGMVENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAY 147
I+ G + + + ++ + + V++A + M + WN +L Y
Sbjct: 878 KIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMY 937
Query: 148 FTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNE 207
++Y+K + ++ R+ G++ D+ T+N +I + + EE ++++M+ +G P
Sbjct: 938 TAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKL 997
Query: 208 ITISSILPACS----ILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNV 263
T S++ A + ++ ++ +E+ GL+ D S ++ + + + +
Sbjct: 998 DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKL---DRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 264 FDMMP----KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSH 319
MM + + + ++++ + GN +EA + N+ + V+ ++ ++ V+
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMPLEPTASAWG 379
S+ + G++ M ++ L EPD ++C V S + E ++ LE
Sbjct: 1115 SKDYNSGIERLLEMKKEGL-EPDHRIWTCFVRAASFSKEKIEVMLLLK--ALEDIGFDLP 1171
Query: 380 ALLGACRVFKNVELAKIAAKKLFDIEPNNPGNYV-SLFNILVSAKLWSEASQIRILMKDR 438
L A R V +KL IE N N+V +L N+L + +L + AS + L R
Sbjct: 1172 IRLLAGRPELLVSEVDGWFEKLKSIEDNAALNFVNALLNLLWAFELRATASWVFQLGIKR 1231
Query: 439 GI 440
GI
Sbjct: 1232 GI 1233
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 118/253 (46%), Gaps = 10/253 (3%)
Query: 140 WNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESL--EMLRK 197
+N ++ Y + ++ K L M + G D ++N +I +++G +L E+L
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 198 MQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKCSD 256
++ G +P+ IT +++L ACS +L +V HR DL + A++ +Y +C
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 257 LNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTG 312
+ +F + K D V +N+++ A A N ++ +++ M + G + +T+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 313 VLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM--- 369
++ +D LQ++ M PDA Y+ ++D +A R EA + M
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 370 PLEPTASAWGALL 382
++PT + AL+
Sbjct: 468 GIKPTLQTYSALI 480
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 7/240 (2%)
Query: 136 DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
DA+++N +L+A + + + +F M + D T+NA+I G E+ +
Sbjct: 296 DAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLF 355
Query: 196 RKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRIG-DLSSTTALVYMYAKC 254
+++ GF P+ +T +S+L A + + KEV+ + G D + +++MY K
Sbjct: 356 MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQ 415
Query: 255 SDLNLSRNVFDMMP-----KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVT 309
L+L+ ++ M D + + +I + EA L ML G+KP T
Sbjct: 416 GQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQT 475
Query: 310 FTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM 369
++ ++ G + + +E F+ M R +PD YS M+DV R +A+ + M
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSG-TKPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 160/356 (44%), Gaps = 31/356 (8%)
Query: 30 DLVGRDVVSWTSLSSCYVNCGLPRQ----GLAIFHEMG---WNGVKPNAVTVSSILPACS 82
D++ +V T C+V + ++ L +F + W+ PNA V++IL
Sbjct: 145 DILDARLVQMTPTDYCFVVKSVGQESWQRALEVFEWLNLRHWHS--PNARMVAAILGVLG 202
Query: 83 ELKDLNSGKAIHGFAVRHGMV-ENVFVCSALVSMYARCLSVKEARAVFDLMPHR----DA 137
A+ F V + V V +A++ +Y+R +A+ + D M R D
Sbjct: 203 RWN--QESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDL 260
Query: 138 VSWNGVLTAYFTNKEYEKGLA--LFSRMSREGVKADKATWNAVIGGCMENGQTEESLEML 195
+S+N ++ A + LA L + G++ D T+N ++ C + + ++++
Sbjct: 261 ISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVF 320
Query: 196 RKMQKMGFKPNEITISSILPA---CSIL-ESLRMGKEVHCYGLRHRIGDLSSTTALVYMY 251
M+ +P+ T ++++ C + E+ R+ E+ G D + +L+Y +
Sbjct: 321 EDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGF---FPDAVTYNSLLYAF 377
Query: 252 AKCSDLNLSRNVFDMMPK----KDVVAWNTMIIANAMHGNGKEALLLFENML-RSGVKPN 306
A+ + + V+ M K KD + +NT+I G AL L+++M SG P+
Sbjct: 378 ARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPD 437
Query: 307 SVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
++T+T ++ + E + + M D ++P YS ++ +++AG+ +EA
Sbjct: 438 AITYTVLIDSLGKANRTVEAAALMSEM-LDVGIKPTLQTYSALICGYAKAGKREEA 492
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 119/259 (45%), Gaps = 15/259 (5%)
Query: 1 MTSDVFLSNALIHAYGKCKCIEGARRVFDDLVGR----DVVSWTSLSSCYVNCGLPRQGL 56
+ D N L+ A + ++GA +VF+D+ D+ ++ ++ S Y CGL +
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 57 AIFHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMY 116
+F E+ G P+AVT +S+L A + ++ K ++ + G ++ + ++ MY
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 117 ARCLSVKEARAVFDLMP-----HRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKAD 171
+ + A ++ M + DA+++ ++ + + AL S M G+K
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 172 KATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC 231
T++A+I G + G+ EE+ + M + G KP+ + S +L LR +
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL-----LRGNETRKA 527
Query: 232 YGL-RHRIGDLSSTTALVY 249
+GL R I D + + +Y
Sbjct: 528 WGLYRDMISDGHTPSYTLY 546
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/427 (19%), Positives = 166/427 (38%), Gaps = 41/427 (9%)
Query: 41 SLSSCYVNCGLPRQGLAIFHEMGWNGVK-PNAVTVSSILPACSELKDLNSGKAIHGFAVR 99
S+ Y G P + ++ G + + I+ A + K +++ G +
Sbjct: 721 SMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQ 780
Query: 100 HGMVENVFVCSALVSMYARCLSVKEARAVFDLM----PHRDAVSWNGVLTAYFTNKEYEK 155
G ++ ++L+S YA+C + ARA+F+ M P S N +L A + E+
Sbjct: 781 SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 156 GLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILP 215
+ + G K K++ ++ G E ++ M+ G+ P
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPT--------- 891
Query: 216 ACSILESLRMGKEVHCYGLRHRIG--------------DLSSTTALVYMYAKCSDLNLSR 261
+ RM E+ C G R R +L+ +++ MY D +
Sbjct: 892 ----IRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV 947
Query: 262 NVFDMMP----KKDVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGC 317
V+ + + D +NT+II +E LL + M G+ P T+ ++S
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAF 1007
Query: 318 SHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPT 374
+ +++ Q+F + L + D + Y M+ + +G +A K +Q M +EPT
Sbjct: 1008 GKQKCLEQAEQLFEELLSKGL-KLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPT 1066
Query: 375 ASAWGALLGACRVFKNVELAKIAAKKLFDIEPN-NPGNYVSLFNILVSAKLWSEASQIRI 433
+ L+ + N + A+ L D E Y S+ + + +K ++ + +
Sbjct: 1067 LATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLL 1126
Query: 434 LMKDRGI 440
MK G+
Sbjct: 1127 EMKKEGL 1133
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 246 ALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHG--NGKEALLLFENML 299
A++ +Y++ + ++ + D M ++ D++++NT+I A G A+ L + +
Sbjct: 230 AMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVR 289
Query: 300 RSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRL 359
SG++P+++T+ +LS CS +D +++F M H +PD Y+ M+ V+ R G
Sbjct: 290 NSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLA 348
Query: 360 DEAYKFIQRMPLE---PTASAWGALLGACRVFKNVELAK 395
EA + + L+ P A + +LL A +N E K
Sbjct: 349 AEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 39/339 (11%)
Query: 108 VCSALVSMYARCLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRM 163
V V + R A + D +P + D ++ +L AY +YEK + LF RM
Sbjct: 177 VIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM 236
Query: 164 SREGVKADKATWNAVIGGCMENGQT-EESLEMLRKMQKMGFKPNEITISSILPACSILES 222
G T+N ++ + G++ + L +L +M+ G K +E T S++L AC+
Sbjct: 237 KEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGL 296
Query: 223 LRMGKE--VHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK----DVVAWN 276
LR KE + G ++ AL+ ++ K + +V M + D V +N
Sbjct: 297 LREAKEFFAELKSCGYEPGTVT-YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYN 355
Query: 277 TMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRD 336
++ A G KEA + E M + GV PN++T+T V+ + DE L++F SM
Sbjct: 356 ELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEA 415
Query: 337 HLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRMP---LEPTASAWGALLGAC-------- 385
V P+ Y+ ++ + + R +E K + M P + W +L C
Sbjct: 416 GCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 386 --RVFKNVELAKIAAKKLFDIEPNNPGNYVSLFNILVSA 422
RVF+ + K EP+ FN L+SA
Sbjct: 475 VNRVFREM--------KSCGFEPDR-----DTFNTLISA 500
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/431 (22%), Positives = 171/431 (39%), Gaps = 90/431 (20%)
Query: 9 NALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLAIFHEMGW 64
NAL+ +GK A V ++ D V++ L + YV G ++ + M
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 65 NGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLSVKE 124
GV PNA+T ++++ A +G A + +F S+KE
Sbjct: 380 KGVMPNAITYTTVIDA-------------YGKAGKEDEALKLFY------------SMKE 414
Query: 125 ARAVFDLMPHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCME 184
A V + ++N VL+ + + + M G ++ATWN ++ C
Sbjct: 415 AGCV------PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 185 NGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHC---YGLRHRIGD- 240
G + + R+M+ GF+P+ T ++++ A R G EV YG R G
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG-----RCGSEVDASKMYGEMTRAGFN 523
Query: 241 --LSSTTALVYMYAKCSDLNLSRNVFDMMPKKDV----VAWNTMIIANAMHGN--GKEAL 292
+++ AL+ A+ D NV M K +++ M+ A GN G E +
Sbjct: 524 ACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERI 583
Query: 293 -------------LLFENML--------------------RSGVKPNSVTFTGVLSGCSH 319
+L +L + G KP+ V F +LS +
Sbjct: 584 ENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTR 643
Query: 320 SRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAG---RLDEAYKFIQRMPLEPTAS 376
+ + D+ I S+ D L PD Y+ ++D++ R G + +E K +++ L+P
Sbjct: 644 NNMYDQAEGILESIREDGL-SPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLV 702
Query: 377 AWGALL-GACR 386
++ ++ G CR
Sbjct: 703 SYNTVIKGFCR 713
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 156/378 (41%), Gaps = 35/378 (9%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLP-RQGLAI 58
DV ++HAY + E A +F+ + +V++ + + G R+ L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 59 FHEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYAR 118
EM G+K + T S++L AC+ L K G +AL+ ++ +
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGK 328
Query: 119 CLSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKAT 174
EA +V M D+V++N ++ AY ++ + M+++GV + T
Sbjct: 329 AGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAIT 388
Query: 175 WNAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGL 234
+ VI + G+ +E+L++ M++ G PN T +++L +GK+ +
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSL--------LGKKSRSNEM 440
Query: 235 RHRIGDLSST------TALVYMYAKCSDLNLSR---NVFDMM------PKKDVVAWNTMI 279
+ D+ S M A C + + + VF M P +D +NT+I
Sbjct: 441 IKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDT--FNTLI 498
Query: 280 IANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLV 339
A G+ +A ++ M R+G T+ +L+ + G + + M +
Sbjct: 499 SAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDM-KSKGF 557
Query: 340 EPDANHYSCMVDVFSRAG 357
+P YS M+ +++ G
Sbjct: 558 KPTETSYSLMLQCYAKGG 575
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 186/483 (38%), Gaps = 103/483 (21%)
Query: 3 SDVFLSNALIHAYGKCKCIEGARRVFDDLVGRDV----VSWTSLSSCYVNCGLPRQGLAI 58
+D N L+ AY + + A V + + + V +++T++ Y G + L +
Sbjct: 349 ADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKL 408
Query: 59 FHEMGWNGVKPNAVTVSSILP---------------------ACSELKDL-NSGKAIHGF 96
F+ M G PN T +++L CS + N+ A+ G
Sbjct: 409 FYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN 468
Query: 97 AVRHGMVENVF-------------VCSALVSMYARCLSVKEARAVFDLMPHRD----AVS 139
V VF + L+S Y RC S +A ++ M +
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTT 528
Query: 140 WNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVI-----GGC----------ME 184
+N +L A ++ G + S M +G K + +++ ++ GG ++
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 185 NGQTEESLEMLRKM--------------------QKMGFKPNEITISSILP--------- 215
GQ S +LR + +K G+KP+ + +S+L
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 216 -ACSILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPKK---- 270
A ILES+R GL DL + +L+ MY + + + + + K
Sbjct: 649 QAEGILESIRED------GLSP---DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKP 699
Query: 271 DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIF 330
D+V++NT+I G +EA+ + M G++P T+ +SG + + E +
Sbjct: 700 DLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVI 759
Query: 331 NSMGRDHLVEPDANHYSCMVDVFSRAGRLDEAYKFIQRM-PLEPTASAWGALLGACRVFK 389
M ++ P+ + +VD + RAG+ EA F+ ++ +P A RV +
Sbjct: 760 ECMAKND-CRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDDQSIQRLALRVRE 818
Query: 390 NVE 392
N+E
Sbjct: 819 NLE 821
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 156/339 (46%), Gaps = 30/339 (8%)
Query: 140 WNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQTEESLEMLRKMQ 199
+N ++ +Y +++ + LF M + G+ T+N+++ ++ G+T + ++ +M+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 200 KM-GFKPNEITISSILPA-CS---ILESLRMGKEVHCYGLRHRIGDLSSTTALVYMYAKC 254
+ G P+ T ++++ C + E+ R+ K++ Y H D+ + ++ +
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELY---HCNPDVVTYNTIIDGLCRA 257
Query: 255 SDLNLSRNVFDMMPKK------DVVAWNTMIIANAMHGNGKEALLLFENMLRSGVKPNSV 308
+ ++ NV M KK +VV++ T++ M EA+L+F +ML G+KPN+V
Sbjct: 258 GKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAV 317
Query: 309 TFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVE--PDANHYSCMVDVFSRAGRLDEAYKFI 366
T+ ++ G S + DE I G D PDA ++ ++ AG LD A K
Sbjct: 318 TYNTLIKGLSEAHRYDEIKDILIG-GNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 367 QR---MPLEPTASAWGALLGACRVFKNVELAKIAAKKLFDIE--------PNNPGNYVSL 415
Q M L P ++++ L+ + + A+ +LF+ E Y +
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPM 436
Query: 416 FNILVSAKLWSEASQI-RILMKDRGITKTPGCSWLQVGN 453
F L + +A ++ R LMK RG+ P L G+
Sbjct: 437 FEYLCANGKTKQAEKVFRQLMK-RGVQDPPSYKTLITGH 474
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 177/414 (42%), Gaps = 36/414 (8%)
Query: 9 NALIHAYGKCKCIEGARRVFDDL----VGRDVVSWTSLSSCYVNCGLPRQGLA--IFHEM 62
N+LI +YG + + ++F + + V+++ SL S + G R G+A +F EM
Sbjct: 142 NSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRG--RTGMAHDLFDEM 199
Query: 63 GWN-GVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARCLS 121
GV P++ T ++++ + ++ I + +V + ++ R
Sbjct: 200 RRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGK 259
Query: 122 VKEARAVFDLM------PHRDAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
VK A V M H + VS+ ++ Y +E ++ + +F M G+K + T+
Sbjct: 260 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 319
Query: 176 NAVIGGCMENGQTEESLEMLRKMQK--MGFKPNEITISSILPACSILESLRMGKEVHCYG 233
N +I G E + +E ++L F P+ T + ++ A L +V
Sbjct: 320 NTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Query: 234 LRHRI-GDLSSTTALVYMYAKCSDLNLSRNVFDMMPKKDVV-----------AWNTMIIA 281
L ++ D +S + L+ ++ + + +F+ + +K+V+ A+N M
Sbjct: 380 LNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY 439
Query: 282 NAMHGNGKEALLLFENMLRSGVKPNSVTFTGVLSGCSHSRLVDEGLQIFNSMGRDHLVEP 341
+G K+A +F +++ GV+ + ++ +++G ++ M R V P
Sbjct: 440 LCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV-P 497
Query: 342 DANHYSCMVDVFSRAGRLDEAYKFIQRM---PLEPTASAWGALLG--ACRVFKN 390
D Y ++D + G A+ +QRM P A+ + ++L A R F N
Sbjct: 498 DLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFAN 551
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 151/329 (45%), Gaps = 19/329 (5%)
Query: 4 DVFLSNALIHAYGKCKCIEGARRVFDDLVGRD----VVSWTSLSSCYVNCGLPRQGLAIF 59
+V++ N L++ + K I A++VFD++ R VVS+ +L + Y G +G +
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 60 HEMGWNGVKPNAVTVSSILPACSELKDLNSGKAIHGFAVRHGMVENVFVCSALVSMYARC 119
H+M + +P+ T S+++ A + ++ + + G++ N + + L+ ++R
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 120 LSVKEARAVFDLMPHR----DAVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATW 175
+ + + M + D V +N ++ + N + + M R G++ DK T+
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 176 NAVIGGCMENGQTEESLEMLRKMQKMGFKPNEITISSIL----PACSILESLRMGKEVHC 231
+I G G E +LE+ ++M + G + + + S+++ ++++ R +E+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 232 YGLRHRIGDLSSTTALVYMYAKCSDLNLSRNVFDMMPK----KDVVAWNTMIIANAMHGN 287
G++ D + T ++ + K D + M VV +N ++ G
Sbjct: 479 AGIK---PDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQ 535
Query: 288 GKEALLLFENMLRSGVKPNSVTFTGVLSG 316
K A +L + ML GV P+ +T+ +L G
Sbjct: 536 MKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 158/337 (46%), Gaps = 25/337 (7%)
Query: 80 ACSELKD----LNSGKAIHGFAVR---HGMVENVFVCSALVSMYARCLSVKEARAVFDLM 132
C L D LN I GF + G NV+V + L++ + + ++ +A+ VFD +
Sbjct: 207 GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 133 PHRD----AVSWNGVLTAYFTNKEYEKGLALFSRMSREGVKADKATWNAVIGGCMENGQT 188
R VS+N ++ Y ++G L +M + + D T++A+I + +
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 189 EESLEMLRKMQKMGFKPNEITISSILPACSILESLRMGKEVHCYGLRHRI-GDLSSTTAL 247
+ + + +M K G PN++ ++++ S + + KE + L + D+ L
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 248 VYMYAKCSDLNLSRNVFDMMPKK----DVVAWNTMIIANAMHGNGKEALLLFENMLRSGV 303
V + K DL +RN+ D M ++ D + + T+I G+ + AL + + M ++G+
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 304 KPNSVTFTGVLSG-CSHSRLVDEGLQIFNSMGRDHLVEPDANHYSCMVDVFSRAGRLDEA 362
+ + V F+ ++ G C R++D + M R ++PD Y+ M+D F + G
Sbjct: 447 ELDRVGFSALVCGMCKEGRVID-AERALREMLRAG-IKPDDVTYTMMMDAFCKKGDAQTG 504
Query: 363 YKFIQRMPLE---PTASAWGALL-GACRV--FKNVEL 393
+K ++ M + P+ + LL G C++ KN ++
Sbjct: 505 FKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541