Miyakogusa Predicted Gene

Lj3g3v0965840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0965840.2 Non Chatacterized Hit- tr|I1KU39|I1KU39_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,94.19,0,GTP_EFTU,Elongation factor, GTP-binding domain;
eIF2_C,Translation initiation factor 2, gamma subuni,CUFF.41904.2
         (466 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation initi...   860   0.0  
AT4G18330.2 | Symbols:  | Translation elongation factor EF1A/ini...   768   0.0  
AT2G18720.1 | Symbols:  | Translation elongation factor EF1A/ini...   732   0.0  
AT4G18330.1 | Symbols:  | Translation elongation factor EF1A/ini...   478   e-135
AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase ho...    80   2e-15
AT4G02930.1 | Symbols:  | GTP binding Elongation factor Tu famil...    75   1e-13

>AT1G04170.1 | Symbols: EIF2 GAMMA | eukaryotic translation
           initiation factor 2 gamma subunit | chr1:1097423-1099702
           FORWARD LENGTH=465
          Length = 465

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/464 (89%), Positives = 439/464 (94%), Gaps = 1/464 (0%)

Query: 1   MSR-KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR 59
           MSR KGL EQDL KLDVT LHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR
Sbjct: 1   MSRNKGLAEQDLKKLDVTVLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR 60

Query: 60  FKNELERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLL 119
           FKNELERNITIKLGYANAKIYKCEDE+C RPM Y+AYGSGKED P C+VPGFEN KMKLL
Sbjct: 61  FKNELERNITIKLGYANAKIYKCEDEKCPRPMCYKAYGSGKEDTPNCDVPGFENSKMKLL 120

Query: 120 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIII 179
           RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE+CPQPQTSEHLAAVEIM+L+HIII
Sbjct: 121 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANETCPQPQTSEHLAAVEIMQLKHIII 180

Query: 180 LQNKVDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPE 239
           LQNK+DLIQENVAINQHE IQKFI  TVAD AP+VP+SAQLKYNIDVVCEYIVKKIPIPE
Sbjct: 181 LQNKIDLIQENVAINQHEAIQKFIMNTVADAAPIVPVSAQLKYNIDVVCEYIVKKIPIPE 240

Query: 240 RNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESG 299
           RNF+SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVL+VNQ IE+RPG++ KDE G
Sbjct: 241 RNFVSPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLRVNQLIEIRPGIVTKDERG 300

Query: 300 NIRCTPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEV 359
           N +CTPIYSRI+SL AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGE+GSLP+V
Sbjct: 301 NSKCTPIYSRIISLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEIGSLPDV 360

Query: 360 FVELEVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKL 419
           FVELEVNFFLLRRLLGVRTKG+E+QGKV+KLTKGE LMLNIGSMSTG KV+ VK DLAKL
Sbjct: 361 FVELEVNFFLLRRLLGVRTKGSEKQGKVSKLTKGEILMLNIGSMSTGAKVVGVKVDLAKL 420

Query: 420 QLTGPVCTSQGEKIALSRRVEKHWRLIGWGQIQAGITLAVPPAP 463
           QLT PVCTS+GEK+ALSRRVEKHWRLIGWGQIQAG T+ VPP+P
Sbjct: 421 QLTAPVCTSKGEKVALSRRVEKHWRLIGWGQIQAGTTIEVPPSP 464


>AT4G18330.2 | Symbols:  | Translation elongation factor
           EF1A/initiation factor IF2gamma family protein |
           chr4:10126747-10128587 FORWARD LENGTH=471
          Length = 471

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/460 (80%), Positives = 409/460 (88%)

Query: 4   KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDL+KLDVTKLHPL PEVISRQATINIGTIGHVAHGKST+VKAISGVQTVRFKNE
Sbjct: 11  KGLAEQDLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNE 70

Query: 64  LERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLLRHVS 123
           LERNITIKLGYANAKIYKCED++C RPM Y++YGSGKED P C+VPGFENCKM L RHVS
Sbjct: 71  LERNITIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVS 130

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNK 183
            VDCPGHDILMATMLNGAAI+DGALLLIAANESCPQPQT+EHLA+V++MRL+HIIILQNK
Sbjct: 131 CVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNK 190

Query: 184 VDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFI 243
           +DLI E  A  QHE IQKFI  T A+ AP+VP+SAQLKYNIDVV EYIVKKIPIP R+F+
Sbjct: 191 IDLINEKAATEQHEAIQKFITNTNAEDAPIVPVSAQLKYNIDVVSEYIVKKIPIPVRDFV 250

Query: 244 SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGNIRC 303
           SPP MIVIRSFDVNKPG    E+KGGVAGGSIL+GVLKVNQ IE+RPG+  KDE GN +C
Sbjct: 251 SPPKMIVIRSFDVNKPGSAGHEMKGGVAGGSILQGVLKVNQLIEIRPGITGKDEHGNSKC 310

Query: 304 TPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVEL 363
           TPIYSRI SL AEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGE+G+LP+VFVEL
Sbjct: 311 TPIYSRITSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEMGTLPDVFVEL 370

Query: 364 EVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKLQLTG 423
           EV++ LL RL+GVRTK  E+Q KV+KLTK E LM+NIGSMSTG KVI VK D+ KLQLT 
Sbjct: 371 EVSYQLLTRLIGVRTKEKEKQMKVSKLTKEEILMVNIGSMSTGAKVIGVKKDMVKLQLTS 430

Query: 424 PVCTSQGEKIALSRRVEKHWRLIGWGQIQAGITLAVPPAP 463
           PVCT+ GEK+ALSRRV++HWRLIG GQI AG T+ VPP P
Sbjct: 431 PVCTTIGEKVALSRRVDRHWRLIGKGQIMAGTTIDVPPPP 470


>AT2G18720.1 | Symbols:  | Translation elongation factor
           EF1A/initiation factor IF2gamma family protein |
           chr2:8114920-8116759 REVERSE LENGTH=470
          Length = 470

 Score =  732 bits (1890), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/466 (75%), Positives = 410/466 (87%), Gaps = 3/466 (0%)

Query: 1   MSR-KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVR 59
           MS+ KGL EQDLSKLDV +LHPLSPEVISRQATINIGTIGHVAHGKST+VKA+SGV TV+
Sbjct: 6   MSKNKGLAEQDLSKLDVAQLHPLSPEVISRQATINIGTIGHVAHGKSTIVKAVSGVHTVK 65

Query: 60  FKNELERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLL 119
           FK+ELERNITIKLGYANAKIYKCE  +C RP++Y+++GSGKED P C+V G E  KMKLL
Sbjct: 66  FKSELERNITIKLGYANAKIYKCE--KCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLL 123

Query: 120 RHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIII 179
           RHVSFVDCPGHDILMATMLNGAAIMDGALL+IAANE+CPQPQT+EHLA+V++M L+ III
Sbjct: 124 RHVSFVDCPGHDILMATMLNGAAIMDGALLIIAANETCPQPQTAEHLASVDMMHLKDIII 183

Query: 180 LQNKVDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPE 239
           +QNK+DLIQEN AI QHE IQ+FI  T A+ AP+VP+SAQLKYNIDV+CEYIVKKIP+P 
Sbjct: 184 IQNKIDLIQENEAIKQHEDIQRFITNTNAEGAPIVPVSAQLKYNIDVLCEYIVKKIPLPV 243

Query: 240 RNFISPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESG 299
           R+F+SPP MIVIRSFDVNKPG + D +KGGVAGGSIL+GVLKV   IE+RPG+  KDE+G
Sbjct: 244 RDFVSPPRMIVIRSFDVNKPGSDYDGMKGGVAGGSILQGVLKVGHIIEIRPGITRKDENG 303

Query: 300 NIRCTPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEV 359
           + +CTPIY+RI SL AEQNELQFAVPGGLIG+GT+MDPTLTR DRLVGQVLGE+G+LP+V
Sbjct: 304 DTKCTPIYTRITSLYAEQNELQFAVPGGLIGIGTSMDPTLTRGDRLVGQVLGEIGTLPDV 363

Query: 360 FVELEVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKL 419
           +VELEV+F LL RL+GV+TK TERQ +V+KL KGE LMLNIGSMSTG  VI VK D+ K+
Sbjct: 364 YVELEVSFQLLTRLIGVKTKETERQMRVSKLVKGEILMLNIGSMSTGAMVIGVKKDMVKV 423

Query: 420 QLTGPVCTSQGEKIALSRRVEKHWRLIGWGQIQAGITLAVPPAPVL 465
            LT PVCTS GEK+A+SRRV++HWRLIG GQI+AG T+ +P  P L
Sbjct: 424 NLTLPVCTSIGEKVAISRRVDRHWRLIGRGQIEAGTTIFIPSPPSL 469


>AT4G18330.1 | Symbols:  | Translation elongation factor
           EF1A/initiation factor IF2gamma family protein |
           chr4:10126747-10128039 FORWARD LENGTH=284
          Length = 284

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 227/274 (82%), Positives = 248/274 (90%)

Query: 4   KGLMEQDLSKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNE 63
           KGL EQDL+KLDVTKLHPL PEVISRQATINIGTIGHVAHGKST+VKAISGVQTVRFKNE
Sbjct: 11  KGLAEQDLTKLDVTKLHPLFPEVISRQATINIGTIGHVAHGKSTIVKAISGVQTVRFKNE 70

Query: 64  LERNITIKLGYANAKIYKCEDERCSRPMSYRAYGSGKEDAPMCEVPGFENCKMKLLRHVS 123
           LERNITIKLGYANAKIYKCED++C RPM Y++YGSGKED P C+VPGFENCKM L RHVS
Sbjct: 71  LERNITIKLGYANAKIYKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVS 130

Query: 124 FVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNK 183
            VDCPGHDILMATMLNGAAI+DGALLLIAANESCPQPQT+EHLA+V++MRL+HIIILQNK
Sbjct: 131 CVDCPGHDILMATMLNGAAIVDGALLLIAANESCPQPQTAEHLASVDMMRLKHIIILQNK 190

Query: 184 VDLIQENVAINQHEVIQKFIEGTVADKAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFI 243
           +DLI E  A  QHE IQKFI  T A+ AP+VP+SAQLKYNIDVV EYIVKKIPIP R+F+
Sbjct: 191 IDLINEKAATEQHEAIQKFITNTNAEDAPIVPVSAQLKYNIDVVSEYIVKKIPIPVRDFV 250

Query: 244 SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILR 277
           SPP MIVIRSFDVNKPG    E+KGGVAGGSIL+
Sbjct: 251 SPPKMIVIRSFDVNKPGSAGHEMKGGVAGGSILQ 284


>AT4G20360.1 | Symbols: ATRAB8D, ATRABE1B, RABE1b | RAB GTPase
           homolog E1B | chr4:10990036-10991466 FORWARD LENGTH=476
          Length = 476

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 181/446 (40%), Gaps = 101/446 (22%)

Query: 29  RQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCS 88
           ++  +NIGTIGHV HGK+T+  A+                T+ L    + + K  DE  +
Sbjct: 76  KKPHVNIGTIGHVDHGKTTLTAAL----------------TMALASIGSSVAKKYDEIDA 119

Query: 89  RPMSYRAYGSGKEDAPMCEVPGFENCKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGAL 148
            P   RA G     A +     +E       RH + VDCPGH   +  M+ GAA MDGA+
Sbjct: 120 APEE-RARGITINTATV----EYETEN----RHYAHVDCPGHADYVKNMITGAAQMDGAI 170

Query: 149 LLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEVIQKFIEGTV- 207
           L+++  +  P PQT EH+   + + +  +++  NK D + +   +   E+  + +  +  
Sbjct: 171 LVVSGADG-PMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYE 229

Query: 208 --ADKAPVVPISAQLKYN----------------------IDVVCEYIVKKIPIPERNFI 243
              D  P++  SA L                         +D V +Y    IPIP+R   
Sbjct: 230 FNGDDIPIISGSALLAVETLTENPKVKRGDNKWVDKIYELMDAVDDY----IPIPQRQTE 285

Query: 244 SPPNMIVIRSFDVNKPGYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGNIRC 303
            P  + V   F +          +G VA G + RG +KV + +++            +R 
Sbjct: 286 LPFLLAVEDVFSITG--------RGTVATGRVERGTVKVGETVDLV----------GLRE 327

Query: 304 TPIYSRIVSLCAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVEL 363
           T  Y+ +  +   Q  L  A+ G  +G+   +   + +AD   G VL + GS+     + 
Sbjct: 328 TRSYT-VTGVEMFQKILDEALAGDNVGL---LLRGIQKADIQRGMVLAKPGSITP-HTKF 382

Query: 364 EVNFFLLRRLLGVRTKGTERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAK----- 418
           E   ++L++         E  G+ +    G      + +    GKV  + ND  +     
Sbjct: 383 EAIIYVLKK---------EEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIMNDKDEESKMV 433

Query: 419 ---------LQLTGPVCTSQGEKIAL 435
                    ++L  PV   QG + A+
Sbjct: 434 MPGDRVKIVVELIVPVACEQGMRFAI 459


>AT4G02930.1 | Symbols:  | GTP binding Elongation factor Tu family
           protein | chr4:1295751-1298354 REVERSE LENGTH=454
          Length = 454

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 183/443 (41%), Gaps = 75/443 (16%)

Query: 33  INIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDERCSRPMS 92
           +N+GTIGHV HGK+T+  AI+ V     K +           A  +I K  +E+      
Sbjct: 68  VNVGTIGHVDHGKTTLTAAITKVLAEEGKAK---------AIAFDEIDKAPEEKKRGITI 118

Query: 93  YRAYGSGKEDAPMCEVPGFENCKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIA 152
             A+              +E  K    RH + VDCPGH   +  M+ GAA MDG +L+++
Sbjct: 119 ATAHVE------------YETAK----RHYAHVDCPGHADYVKNMITGAAQMDGGILVVS 162

Query: 153 ANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEVIQKFIEGTV---AD 209
             +  P PQT EH+     + +  ++   NKVD++ +   +   E+  + +        D
Sbjct: 163 GPDG-PMPQTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGD 221

Query: 210 KAPVV---PISAQLKYNIDVVCEYIVK-------KIPIPERNFISPPNMIVIRSFDVNKP 259
             P++    +SA    N ++  + I+K        IP P R    P  M +   F +   
Sbjct: 222 DIPIIRGSALSALQGTNDEIGRQAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQG- 280

Query: 260 GYEVDEIKGGVAGGSILRGVLKVNQFIEVRPGMIDKDESGNIRCTPIYSRIVSLCAEQNE 319
                  +G VA G I +GV+KV + +E+    +   E G     P+ S +  +   +  
Sbjct: 281 -------RGTVATGRIEQGVIKVGEEVEI----LGLREGG----VPLKSTVTGVEMFKKI 325

Query: 320 LQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTK 379
           L     G  +G+   +   L R D   G V+ + GS  + + + E   ++L +  G R  
Sbjct: 326 LDNGQAGDNVGL---LLRGLKREDIQRGMVIAKPGSC-KTYKKFEAEIYVLTKDEGGRHT 381

Query: 380 G------TERQGKVAKLTKGETLMLNIGSMSTGGKVIAVKNDLAKLQLTGPVCTSQGEKI 433
                   +   + A +T    L  N+  +  G  V AV       +L  PV    G++ 
Sbjct: 382 AFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAV------FELIMPVPLETGQRF 435

Query: 434 ALSRRVEKHWRLIGWGQIQAGIT 456
           AL     +  R +G G +   +T
Sbjct: 436 AL----REGGRTVGAGVVSKVMT 454