Miyakogusa Predicted Gene

Lj3g3v0965710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0965710.1 Non Chatacterized Hit- tr|H0YVT5|H0YVT5_TAEGU
Uncharacterized protein OS=Taeniopygia guttata
GN=LOC1,35.92,4e-19,HORMA,DNA-binding HORMA; no
description,DNA-binding HORMA; The spindle assembly checkpoint protein
m,CUFF.41917.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16590.1 | Symbols: REV7, ATREV7 | DNA-binding HORMA family p...   283   4e-77

>AT1G16590.1 | Symbols: REV7, ATREV7 | DNA-binding HORMA family
           protein | chr1:5673886-5674890 FORWARD LENGTH=215
          Length = 215

 Score =  283 bits (725), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 128/198 (64%), Positives = 164/198 (82%)

Query: 4   RENQTPQGQTAQVLVEFLEVAITAVVFLKGVYPSGAFERRRYMNLVVQRACHPQLRYYIH 63
           R++    G+  + LV+F+EVAIT +V+LKG YPS AFERRRYMN+VVQRA HP+LR YIH
Sbjct: 3   RKDDNQSGEVGRTLVDFMEVAITMIVYLKGFYPSAAFERRRYMNVVVQRARHPELRDYIH 62

Query: 64  ATVSGLLPFLQKGIVERVAVIFFNSGNVPLEKFVFKLAMNQSYGSAVEEVDLESSLRSFL 123
           +  SGLLPF++KG+VERVAV+FF+  NVP+E+F+FK+ +  S  + VEE  LE +LRSFL
Sbjct: 63  SAASGLLPFIEKGLVERVAVVFFSEDNVPVERFIFKITIKPSCAALVEEGQLEFALRSFL 122

Query: 124 IKLSISESLTKELPPDCRWEITAYFRSLPETGTNKEADLWIPTDTKQWQQPPLITPIKSM 183
           IKLS+S+SL K LP +CRWE+TAY RSLP+ G++KEA+LWIPTDTKQWQ PP++TP+KS+
Sbjct: 123 IKLSVSKSLVKPLPLNCRWEVTAYLRSLPQVGSSKEAELWIPTDTKQWQNPPVLTPVKSL 182

Query: 184 SCEPLCLQLYLEHPCLPE 201
           + EPLCLQLYLEHP L E
Sbjct: 183 NSEPLCLQLYLEHPSLSE 200