Miyakogusa Predicted Gene

Lj3g3v0950930.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0950930.1 Non Chatacterized Hit- tr|I1MJB2|I1MJB2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52825
PE,78.48,0,Methyltransf_26,NULL; no description,NULL;
S-adenosyl-L-methionine-dependent methyltransferases,NULL,CUFF.41891.1
         (308 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G64150.1 | Symbols:  | RNA methyltransferase family protein |...   365   e-101

>AT5G64150.1 | Symbols:  | RNA methyltransferase family protein |
           chr5:25668997-25670731 REVERSE LENGTH=377
          Length = 377

 Score =  365 bits (938), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/324 (55%), Positives = 236/324 (72%), Gaps = 31/324 (9%)

Query: 15  FPKLLNSSAFSNLCRPICSIAPQSPP-----------------ITLKPQIPLFLRPPIYS 57
           FP L  +S  S   +P+CS +P   P                 +++ P+ PL+LR P ++
Sbjct: 5   FPSLRLTSLLSA-AKPLCSSSPAKKPPQYTSLTESKSSRPTKSLSITPKTPLYLRTPSHA 63

Query: 58  TKLSDLKKWQDWAKNVASSVGSTFVESDNGPDSSILCRELKWLMEDAVVE---------- 107
           T LS++ KW DWAK++ASSV  +   S++  DS IL RELKWL+ED++V+          
Sbjct: 64  TSLSEVWKWHDWAKDLASSVEESSKNSEDTLDSVILHRELKWLIEDSIVDDPLVILHRSE 123

Query: 108 ---QDDERVRMRAGIEELYCLWKERIQERRPFQYIVGCEHWRDLVLSVQEGVLIPRPETE 164
                ++ V++RA +EELY LW++RI++RRPFQY+VGCEHWRDLVL V+EGVLIPRPETE
Sbjct: 124 IADNGEKNVKLRASLEELYDLWRQRIEKRRPFQYVVGCEHWRDLVLCVEEGVLIPRPETE 183

Query: 165 HVVDMVNGVVSKNEDLRGGVWADLGTGSGALAIGIGRILEDRGRVIATDLSPVAVAVAAY 224
            +VDMV  +V+++E  +  +WADLGTGSGA+AIGI ++L  RGRVIATDLSPVA+AVA +
Sbjct: 184 LIVDMVEELVTRDEWFKKDIWADLGTGSGAIAIGIAKVLGSRGRVIATDLSPVAIAVAGH 243

Query: 225 NVKRYCLQDKIEIREGSWFEPLKGMEGELAGLISNPPYIPSKDISGLQAEVGRHEPRLAL 284
           NV+RY L+  IE+REGSWFEPLK +EG+L GL+SNPPYIPS DI GLQAEVGRHEP+LAL
Sbjct: 244 NVQRYSLEGMIEVREGSWFEPLKDLEGKLVGLVSNPPYIPSDDIPGLQAEVGRHEPKLAL 303

Query: 285 DGGTYGMEALLHLCDGAALMLKPG 308
           DGG  G ++L HLC GA+ ML+PG
Sbjct: 304 DGGIDGTDSLFHLCHGASRMLQPG 327