Miyakogusa Predicted Gene

Lj3g3v0950810.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0950810.1 Non Chatacterized Hit- tr|I1MJB8|I1MJB8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21855 PE,79.37,0,no
description,NULL; rRNA_methylase,Putative rRNA methylase; seg,NULL;
S-adenosyl-L-methionine-depen,CUFF.41817.1
         (280 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16445.1 | Symbols:  | S-adenosyl-L-methionine-dependent meth...   271   4e-73

>AT1G16445.1 | Symbols:  | S-adenosyl-L-methionine-dependent
           methyltransferases superfamily protein |
           chr1:5617811-5619303 FORWARD LENGTH=274
          Length = 274

 Score =  271 bits (693), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 128/205 (62%), Positives = 154/205 (75%), Gaps = 2/205 (0%)

Query: 78  GLEDAFVSYLFGKKRATDVAHMVWKQVVQKGDTVIDATCGNGFDTLAMLNLVADDS--HN 135
           GLED FV YLFG+K+AT+VAH+VW+QV+QKGDTVIDATCGNG DTLAML +V  DS    
Sbjct: 68  GLEDVFVGYLFGRKKATEVAHVVWEQVIQKGDTVIDATCGNGNDTLAMLKMVMHDSVGCG 127

Query: 136 GYVYALDIQKDALNNTSLLLEESINADKKQLVKLFNTCHSKMEEIVPRNALVRLVAFNLG 195
           GYVYA+DIQKDA+ +TS LL++++ + +K+ VKLFN CHSKM EIVP NA VR+VAFNLG
Sbjct: 128 GYVYAMDIQKDAIESTSSLLDQAVGSKEKECVKLFNLCHSKMGEIVPENARVRMVAFNLG 187

Query: 196 YLPGSDKEIIXXXXXXXXXXXXXXXXXXXXGLISIVVYVGHPGGREELEAVETFAARLSV 255
           YLPG +K II                    GLIS+VVY+GHPGGREELE VE F + L V
Sbjct: 188 YLPGGNKSIITLSDTTLSALKAAERILKPGGLISLVVYIGHPGGREELEVVEAFGSGLPV 247

Query: 256 ETWICCKLQMLNRPSAPIPIFLFRR 280
             WICCK QMLNRP AP+ +F+F+R
Sbjct: 248 SDWICCKFQMLNRPLAPVLVFMFKR 272