Miyakogusa Predicted Gene

Lj3g3v0938180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0938180.1 tr|G7IGU5|G7IGU5_MEDTR Strawberry notch-like
protein OS=Medicago truncatula GN=MTR_2g063620 PE=4
SV=,74.63,0,SUBFAMILY NOT NAMED,NULL; STRAWBERRY NOTCH-RELATED,Protein
strawberry notch-like; PHD zinc finger,Zi,CUFF.41728.1
         (1215 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79350.1 | Symbols: EMB1135 | RING/FYVE/PHD zinc finger super...  1707   0.0  

>AT1G79350.1 | Symbols: EMB1135 | RING/FYVE/PHD zinc finger
            superfamily protein | chr1:29844829-29853215 REVERSE
            LENGTH=1295
          Length = 1295

 Score = 1707 bits (4421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 840/1289 (65%), Positives = 991/1289 (76%), Gaps = 99/1289 (7%)

Query: 5    LTLRCGGCRKNLRAGAGVTELQCPNCQMPNSF---------------------------- 36
            + +RC GCR  LR   GV E  CP CQ+P                               
Sbjct: 28   VQVRCAGCRVILRVKTGVVEFSCPTCQLPQMLPPELLSRARPQFPQSPQQPPQPIQTLPP 87

Query: 37   -----------------ASAIDSSAAQLRCSACKSLVIAPVGLARFPCPQCAVELXXXXX 79
                             A  ID +  QL C+ C++++  P GL RF CPQC VEL     
Sbjct: 88   PIQQQLKPLNLPRPPVPAHGIDPTKMQLPCANCQAILNVPHGLTRFSCPQCHVELAVDVS 147

Query: 80   XXXXX--------------------------XNELVVEVERDEDGGGVAGETFMDYRPAK 113
                                            NE  +EVER+ED GG AGETFMDYRP K
Sbjct: 148  KLNRSLTASQSHSNPPTPAAPTVPPPPPPEEVNEEAIEVEREEDEGGTAGETFMDYRPPK 207

Query: 114  VSMGPPHPDSVVETSSLSAVPPPEPTYNPRIKDHLESSKTLSSLQIETLVYACQRHTQHL 173
            +S+GPPHPD +VETSSLSAV PPEPTY+ +IK+ LE SK LS LQIETLVYACQRH QHL
Sbjct: 208  LSIGPPHPDPIVETSSLSAVQPPEPTYDLKIKEELERSKALSCLQIETLVYACQRHLQHL 267

Query: 174  PDGTRAGFFIGDGAGVGKGRTIAGLIWENWHHGRKKALWISVGSDLKFDARRDLDDMDAT 233
             DGTRAGFF+GDGAGVGKGRTIAGLIWENW HGR+KALWIS+GSDLK+DARRDLDD+ AT
Sbjct: 268  ADGTRAGFFVGDGAGVGKGRTIAGLIWENWKHGRRKALWISIGSDLKYDARRDLDDVGAT 327

Query: 234  CIKVHALNKLPYSKLESKAVGVRDGVIFLTYSSLIASSEKSRSRLQQLVQWCGPGFDGLI 293
            C+ V+ LNKLPYSKL+SK VG+++GV+FLTY+SLIASSEK RSRLQQLVQWCGP FDGL+
Sbjct: 328  CVGVNPLNKLPYSKLDSKNVGIKEGVVFLTYNSLIASSEKGRSRLQQLVQWCGPEFDGLL 387

Query: 294  IFDECHKAKNLVPEIGKQPTRTGEAVLDIQARLPEARVVYCSATGASESRNMAYMVRLGL 353
            IFDECHKAKNLVPE G QPTR G+AV+DIQ ++P+ARV+YCSATGASE RNM YMVRLGL
Sbjct: 388  IFDECHKAKNLVPEAGSQPTRIGQAVVDIQDKIPQARVIYCSATGASEPRNMGYMVRLGL 447

Query: 354  WGDGTSFCDFGEFLGALERGGVGALELVAMDMKARGMYLCRTLSYKGAEFEVIEAPLEDE 413
            WG GTSF DF +FLGAL++GG GALELVAMDMKARGMY+CRTLSYKGAEFE++EA LE  
Sbjct: 448  WGAGTSFSDFNKFLGALDKGGTGALELVAMDMKARGMYVCRTLSYKGAEFEIVEARLEAG 507

Query: 414  MMNLYKKATEFWVELREKLLSAIAFL-NEKPNCRQLWRSYWASHQRFFRHLCMSAKVPTV 472
            M  +Y K+ EFW ELR +LLSA AFL NEKPN  QLWR YW+SHQRFFRHLCMSAKVP  
Sbjct: 508  MEAMYNKSAEFWAELRIELLSASAFLPNEKPNSSQLWRLYWSSHQRFFRHLCMSAKVPVT 567

Query: 473  VRLVKEALIEDKCVVIGLQSTGEARTEEAVSKYGFELDDFVSGPRELLLKFVEENYPLPE 532
            VRL K+AL  +KCVVIGLQSTGEARTEEAV+KYG ELDDFVSGPRELLLKFVEENYPLPE
Sbjct: 568  VRLAKKALSTNKCVVIGLQSTGEARTEEAVNKYGLELDDFVSGPRELLLKFVEENYPLPE 627

Query: 533  KPELLSGEDGVKELQRKRHLASPEISAKGRVRKIAKPQPPXXXXXXXXXXXXXXXXXXXX 592
            +PE LS +D VKELQRKRH ASP +S +GRVRK+AK +P                     
Sbjct: 628  QPEPLSEDDSVKELQRKRHSASPGVSIRGRVRKMAKWKPDSDN----------------- 670

Query: 593  XYGPERD-ESALSDRESTDSDYDELQTCEICSTEEERENLLQCSSCGKLVHQSCLGSPIC 651
                E D ES     + ++   DE Q C+ICS E+ER+ LL CS C KL H  C+  P+ 
Sbjct: 671  ----ESDLESEADSADDSNDSDDEFQICQICSGEDERKKLLHCSECDKLFHPDCVVPPVI 726

Query: 652  DLVLKEWLCHLCKEKTEDYLPGRPAYI-ELKNRYDTVLEWKTKLLEMIRALDLPNNPLDD 710
            DL  + W+C  CKEKTE+Y+  R  YI EL+ RY+  LE K+K++E+IR+L+LPNNPLDD
Sbjct: 727  DLPSEAWICFSCKEKTEEYIQARRLYIAELQKRYEAALERKSKIIEIIRSLNLPNNPLDD 786

Query: 711  IMDQLGGPDKVAEMTGRKGVLVRDPSGKGVIYQARNI-DVSMEMANMHEKKLFMDGKKLV 769
            I+DQLGGP+KVAEMTGR+G+LVR  +GKGV YQARN  D++MEM NMHEK+LFMDGKKLV
Sbjct: 787  IVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKDITMEMVNMHEKQLFMDGKKLV 846

Query: 770  AIISEAGSAGVSLQADRRVGNQKRRVHITLELPWSADRAIQQFGRTHRSNQASAPQYRLL 829
            AIISEAGSAGVSLQADRR  NQKRRVH+TLELPWSADRAIQQFGRTHRSNQ SAP+YRLL
Sbjct: 847  AIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRAIQQFGRTHRSNQTSAPEYRLL 906

Query: 830  FTNLGGERRFASVVAKRLESLGALTQGDRRA---GPSLSAYNYDSPYGRRALMILYRGIM 886
            FTNLGGERRFAS+VAKRLE+LGALTQGDRRA   GPSLSAYNYDS +G+++LM++YRGIM
Sbjct: 907  FTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLSAYNYDSNFGKKSLMVMYRGIM 966

Query: 887  EQDTLPVVPPGCFSDRPDTIKGFIMQAKAALISVGIVRDTILGDDEDSRRLFGRITDSDM 946
            EQ+ LPV+PPGC  D P+T+K F+ +A+AAL++VGIVRD++L + +D  R  GRI DSDM
Sbjct: 967  EQEKLPVLPPGCSIDEPETVKEFLTKARAALVAVGIVRDSVLANGKDVGRFSGRIIDSDM 1026

Query: 947  HDVGRFLNRLLGLPPDTQNKLFELFLKIFDLLIQNARNEGNLDTGIVDLKANAIELKGTP 1006
            HDVGRFLNRLLGLPPD QN+LFELF  I D+L+ NAR EG+ D+GIVD+KAN++EL  TP
Sbjct: 1027 HDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARIEGSFDSGIVDMKANSVELLSTP 1086

Query: 1007 KTVYVDQMSGASTVLFTFIFDRGISWELANTMLNEMQKDGLGSSNDGFYKSKREWLGKRH 1066
            KTV+VDQMSGAST+LFTF  DRG++WE A++ML   ++DGLGS+NDGF++SKREWLG+RH
Sbjct: 1087 KTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRRDGLGSANDGFFESKREWLGRRH 1146

Query: 1067 FILAFESSASAMYKIIRPPLGESPREMHLTELKRKYTKVSTLEEAQTGWQVEYQASSKQC 1126
            FILAFES+AS ++KI+RP +GES REM L+ELK KY K+S+LE+A+TGW+ EY+ SSKQC
Sbjct: 1147 FILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRKLSSLEKARTGWEDEYEVSSKQC 1206

Query: 1127 MHGPNCKLRNFCTIGSRLQEVNVLGGLILPVWKTIEMVLSNQAVQRHKRLRVVRVETTPD 1186
            MHGP CKL  +CT+G R+QEVNV+GGLILP+W TIE  LS QA   HKR+RV+R+ETT D
Sbjct: 1207 MHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKALSKQARHSHKRIRVIRIETTTD 1266

Query: 1187 NPHIVGLLVPNSAVKTVLQGLAWAPNVDD 1215
            N  IVGL +PN+AV+TVLQ LAW   +DD
Sbjct: 1267 NQRIVGLSIPNAAVETVLQDLAWVQEIDD 1295