Miyakogusa Predicted Gene
- Lj3g3v0937900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0937900.1 Non Chatacterized Hit- tr|I1KTU7|I1KTU7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.86,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; seg,NULL;
DEAD,DNA/RNA helicase, DEAD/DEA,CUFF.41682.1
(561 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 678 0.0
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 1e-40
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 160 3e-39
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 158 1e-38
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 155 1e-37
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 154 2e-37
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 154 2e-37
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 153 3e-37
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 152 5e-37
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 152 5e-37
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 152 5e-37
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 151 1e-36
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 151 1e-36
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 150 2e-36
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 150 2e-36
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 150 3e-36
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 149 4e-36
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 149 6e-36
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 149 6e-36
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 148 9e-36
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 148 9e-36
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 148 9e-36
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 148 9e-36
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 148 9e-36
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 147 2e-35
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 147 2e-35
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 147 2e-35
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 147 3e-35
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 146 4e-35
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 146 4e-35
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 146 4e-35
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 145 8e-35
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 145 9e-35
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 144 1e-34
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 144 2e-34
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 141 1e-33
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 141 1e-33
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 2e-33
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 2e-33
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 140 2e-33
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 140 2e-33
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 140 2e-33
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 139 7e-33
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 138 9e-33
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 137 2e-32
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 136 5e-32
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 136 5e-32
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 135 5e-32
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 135 6e-32
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 135 6e-32
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 135 1e-31
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 134 1e-31
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 133 3e-31
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 133 3e-31
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 132 9e-31
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 127 2e-29
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 125 7e-29
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 125 1e-28
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 124 3e-28
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 123 3e-28
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 121 2e-27
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 120 2e-27
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 117 1e-26
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 117 2e-26
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 116 4e-26
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 114 2e-25
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 114 2e-25
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 110 2e-24
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 110 3e-24
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 110 3e-24
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 107 2e-23
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 99 1e-20
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 94 3e-19
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 93 4e-19
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 88 2e-17
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 88 2e-17
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 87 2e-17
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 84 4e-16
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 61 2e-09
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 57 4e-08
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/558 (61%), Positives = 419/558 (75%), Gaps = 9/558 (1%)
Query: 1 MPALISAKFFSLVGGSFPMRRVLANSRFAWFHSSVHCMSKLEPHHGSLTLSSIDVQSEVD 60
M A S +F L+ R++ FH + + GSLTL+S+D+ ++
Sbjct: 1 MAASTSTRFLVLLKDFSAFRKISWTCAATNFHRQSRFLCHVAKEDGSLTLASLDLGNK-- 58
Query: 61 PKNRTKLNKPYKALSSSSESLKNKGKPFGNNERKPVRVLDKQQIESAPFAAESFSELGLP 120
P+ K S +E + K + N++ K V+ +I S F+A+SF ELGLP
Sbjct: 59 PRKFGKGKAMKLEGSFVTEMGQGKVRAVKNDKMKVVKEKKPAEIVSPLFSAKSFEELGLP 118
Query: 121 NVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNK 180
+ L+D LE EGF+VPT+VQSAAVP I+K HD +IQSYTGSGKTLAYLLPILS IGPL K
Sbjct: 119 DSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEK 178
Query: 181 VPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVGGANRTRQ 240
E + K+ IQA+IVAPSRELGMQIVRE EK+LG +++ VQQLVGGANR RQ
Sbjct: 179 SRSSHSE---NDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQ 235
Query: 241 EEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHV 300
EEALKKNKPAIVVGTPGRIAE+S GKLHTHGCRFLVLDEVDELLSFNFRE++HRI+EHV
Sbjct: 236 EEALKKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHV 295
Query: 301 GRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPA 360
G+RSGAG + ERA RQ I+VSATVPFSV+RAA+SW +P+LV+ANKV PL+TV P+
Sbjct: 296 GKRSGAGPKGEVD-ERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPS 354
Query: 361 EPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVI 420
P+ Q Q ++SLPPALKHYYC+ + QHKVDTLRRC+HALDA+ VI
Sbjct: 355 APV---MSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVI 411
Query: 421 AFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGL 480
AFMNH++QLKDVV+KLEARGM + E+HGDLGKL RST LKKFKNGE++VLVTNELSARGL
Sbjct: 412 AFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGL 471
Query: 481 DVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQKQLGIPIP 540
DVAECDLVVNLELPTD++HYAHRAGRTGRLGR GTV+T+CEE +VF+VKK++KQLG+P
Sbjct: 472 DVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFL 531
Query: 541 CCDITEGKLVVTEEEKVL 558
C+ +G+LVVTEE+K +
Sbjct: 532 YCEFVDGELVVTEEDKAI 549
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 203/430 (47%), Gaps = 55/430 (12%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
++F+ELG+ L+ E G+ P+++Q+ A+P L+ DVI + TGSGKT A+ +PIL
Sbjct: 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQL 231
A+ G D A +++P+REL +QI +FE LG D L
Sbjct: 69 QALLEYVYDSEPKKGRRPDP----AFFACVLSPTRELAIQIAEQFEA-LGADISLRCAVL 123
Query: 232 VGGANRTRQEEALKKNKPAIVVGTPGRIAE-LSAAGKLHTHGCRFLVLDEVDELLSFNFR 290
VGG +R +Q AL K +P ++V TPGR+ + +S ++LVLDE D LL+ +F
Sbjct: 124 VGGIDRMQQTIALGK-RPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFE 182
Query: 291 ENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANK 350
+++++I+E + R+ + SAT+ K
Sbjct: 183 KSLNQILEEIPLE---------------RKTFLFSATM-------------------TKK 208
Query: 351 VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRC 410
V L+ P+K+ A+ S LK Y V ++K L
Sbjct: 209 VRKLQRACLRNPVKIEA--------------ASKYSTVDTLKQQYRFVAAKYKDCYLVYI 254
Query: 411 IHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVL 470
+ + + F + + L + G A + G + + R L KFK GE +L
Sbjct: 255 LSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGECNIL 314
Query: 471 VTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKK 530
V ++++RGLD+ D+V+N ++PT+S Y HR GRT R GR+G +++ + E+ +
Sbjct: 315 VCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEWYIQ 374
Query: 531 LQKQLGIPIP 540
++K +G +P
Sbjct: 375 IEKLIGKKLP 384
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 188/420 (44%), Gaps = 75/420 (17%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P +SF ++G P+ +++ ++ GFT PT +QS P +K D+I + TGSGKTL+YL
Sbjct: 95 PKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYL 154
Query: 168 LPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKA 227
LP + + N P + GD G L++AP+REL +QI +E K G +K
Sbjct: 155 LPAIVHV----NAQPMLA--HGD-----GPIVLVLAPTRELAVQIQQEASK-FGSSSKIK 202
Query: 228 VQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSF 287
+ GG + Q L+K IV+ TPGR+ ++ + + +LVLDE D +L
Sbjct: 203 TTCIYGGVPKGPQVRDLQKGV-EIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDM 261
Query: 288 NFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLV- 346
F + +I+ H+ R RQ + SAT P V + ++ + +P V
Sbjct: 262 GFDPQIRKIVSHI---------------RPDRQTLYWSATWPKEVEQLSKKFLYNPYKVI 306
Query: 347 ------RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRL 400
+AN+ A++ V+
Sbjct: 307 IGSSDLKANR---------------------------------------AIRQIVDVISE 327
Query: 401 QHKVDTLRRCIHA-LDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTL 459
K + L + + +D ++ F++ K + +L G A +HGD + R L
Sbjct: 328 SQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVL 387
Query: 460 KKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+F++G+ ++ +++ARGLDV + V+N + P Y HR GRTGR G GT T
Sbjct: 388 SEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 447
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 194/449 (43%), Gaps = 64/449 (14%)
Query: 75 SSSSESLKNKGKPFGNNERKPVRVLDKQQIE----SAPFAAESFSELGLPNVLIDRLENE 130
SS S + NE P K +I P SF GLPN L+ + +
Sbjct: 120 SSGGSSARGPPSSAAGNELSPEAYCRKHEITVSGGQVPPPLMSFEATGLPNELLREVYSA 179
Query: 131 GFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGD 190
GF+ P+ +Q+ + P +++ D++ + TGSGKTL YL+P + + N D
Sbjct: 180 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHN----------D 229
Query: 191 SGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPA 250
S ++G L+++P+REL QI E K G +K + L GGA + Q + +++
Sbjct: 230 S--RMGPTILVLSPTRELATQIQVEALK-FGKSSKISCACLYGGAPKGPQLKEIERGV-D 285
Query: 251 IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADP 310
IVV TPGR+ ++ ++ H +LVLDE D +L F + +I+ V +
Sbjct: 286 IVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTK------- 338
Query: 311 NSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXX 370
RQ +M +AT P V + A +P V V L
Sbjct: 339 --------RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDEL---------------- 374
Query: 371 XXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLK 430
QT +E L P KH L + + + + I TK++
Sbjct: 375 -VANKSITQT---IEVLAPMEKH-----------SRLEQILRSQEPGSKIIIFCSTKRMC 419
Query: 431 DVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVN 490
D + + R A +HGD + R L +F++G VLV +++ARGLDV + +VVN
Sbjct: 420 DQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVN 479
Query: 491 LELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+ P Y HR GRTGR G G T
Sbjct: 480 YDFPNGVEDYVHRIGRTGRAGATGLAYTF 508
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 190/422 (45%), Gaps = 67/422 (15%)
Query: 105 ESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTL 164
+ P ++F ++ P ++D L+ +G PT +Q +P IL D+I ++TGSGKTL
Sbjct: 139 DDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTL 198
Query: 165 AYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQ---IVREFEKILG 221
++LP++ +P +GEG +G LIV PSREL Q +V +F L
Sbjct: 199 VFVLPMIMIALQEEMMMPIAAGEG-----PIG---LIVCPSRELARQTYEVVEQFVAPLV 250
Query: 222 MDNKKAVQQL--VGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLD 279
++ L +GG + Q E +K+ IVV TPGR+ ++ A K+ CR+L LD
Sbjct: 251 EAGYPPLRSLLCIGGIDMRSQLEVVKRGV-HIVVATPGRLKDMLAKKKMSLDACRYLTLD 309
Query: 280 EVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSW 339
E D L+ F +++ + +H ++ RQ ++ SAT+P + ARS
Sbjct: 310 EADRLVDLGFEDDIREVFDHF---------------KSQRQTLLFSATMPTKIQIFARSA 354
Query: 340 GCDPLLVRANK--VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCV 397
P+ V + L+ + E
Sbjct: 355 LVKPVTVNVGRAGAANLDVIQEVE-----------------------------------Y 379
Query: 398 VRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARST 457
V+ + K+ L C+ V+ F + + D+ L +G+ A +HG + R
Sbjct: 380 VKQEAKIVYLLECLQKTSPP-VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREY 438
Query: 458 TLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVL 517
+ FK G+ VLV +++++GLD + V+N ++P + +Y HR GRTGR G+ G
Sbjct: 439 AISSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIAT 498
Query: 518 TI 519
T
Sbjct: 499 TF 500
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 206/441 (46%), Gaps = 64/441 (14%)
Query: 100 DKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTG 159
D +E+ + S+L LP L + LE G T +Q A + L+ D+I ++ TG
Sbjct: 90 DNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTG 149
Query: 160 SGKTLAYLLPILSAIGPLRNKVPQGSGEGGD--SGKKLG--IQALIVAPSRELGMQIVRE 215
+GKTLA+ +PI+ + + E GD + ++ G + L++AP+REL Q+ +E
Sbjct: 150 TGKTLAFGIPIIKRL----------TEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE 199
Query: 216 FEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRF 275
++ + V GG + T Q+ AL + +VVGTPGRI +L L +
Sbjct: 200 IKESAPYLSTVCV---YGGVSYTIQQSALTRGVD-VVVGTPGRIIDLIEGRSLKLGEVEY 255
Query: 276 LVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRA 335
LVLDE D++L+ F E + I+E++ + RQ ++ SAT+P V +
Sbjct: 256 LVLDEADQMLAVGFEEAVESILENLPTK---------------RQSMLFSATMPTWVKKL 300
Query: 336 ARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYY 395
AR + +PL + +V + AE IKL + +
Sbjct: 301 ARKYLDNPLNI---DLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI------------ 345
Query: 396 CVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLAR 455
++A K ++ TK+ D V + + LHGD+ + R
Sbjct: 346 --------------TVYAKGGKTIV--FTQTKRDADEVSLALSNSIATEALHGDISQHQR 389
Query: 456 STTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGT 515
TL F+ G+ VLV ++++RGLD+ DLV++ ELP D + HR+GRTGR G+ G+
Sbjct: 390 ERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGS 449
Query: 516 VLTICEEPEVFVVKKLQKQLG 536
+ + + V+ L++ +G
Sbjct: 450 AILMHTSSQKRTVRSLERDVG 470
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/441 (27%), Positives = 206/441 (46%), Gaps = 64/441 (14%)
Query: 100 DKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTG 159
D +E+ + S+L LP L + LE G T +Q A + L+ D+I ++ TG
Sbjct: 90 DNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTG 149
Query: 160 SGKTLAYLLPILSAIGPLRNKVPQGSGEGGD--SGKKLG--IQALIVAPSRELGMQIVRE 215
+GKTLA+ +PI+ + + E GD + ++ G + L++AP+REL Q+ +E
Sbjct: 150 TGKTLAFGIPIIKRL----------TEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKE 199
Query: 216 FEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRF 275
++ + V GG + T Q+ AL + +VVGTPGRI +L L +
Sbjct: 200 IKESAPYLSTVCV---YGGVSYTIQQSALTRGVD-VVVGTPGRIIDLIEGRSLKLGEVEY 255
Query: 276 LVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRA 335
LVLDE D++L+ F E + I+E++ + RQ ++ SAT+P V +
Sbjct: 256 LVLDEADQMLAVGFEEAVESILENLPTK---------------RQSMLFSATMPTWVKKL 300
Query: 336 ARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYY 395
AR + +PL + +V + AE IKL + +
Sbjct: 301 ARKYLDNPLNI---DLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLI------------ 345
Query: 396 CVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLAR 455
++A K ++ TK+ D V + + LHGD+ + R
Sbjct: 346 --------------TVYAKGGKTIV--FTQTKRDADEVSLALSNSIATEALHGDISQHQR 389
Query: 456 STTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGT 515
TL F+ G+ VLV ++++RGLD+ DLV++ ELP D + HR+GRTGR G+ G+
Sbjct: 390 ERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGS 449
Query: 516 VLTICEEPEVFVVKKLQKQLG 536
+ + + V+ L++ +G
Sbjct: 450 AILMHTSSQKRTVRSLERDVG 470
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 188/414 (45%), Gaps = 75/414 (18%)
Query: 114 FSELGL-PNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
F L L PNV + ++ +G+ VPT +Q +P IL DV+ + TGSGKT A+L+P+L
Sbjct: 30 FESLNLGPNVF-NAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLE 88
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
L+ VPQG G++ALI++P+R+L Q ++ F K LG V LV
Sbjct: 89 K---LKQHVPQG-----------GVRALILSPTRDLAEQTLK-FTKELGKFTDLRVSLLV 133
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAE-LSAAGKLHTHGCRFLVLDEVDELLSFNFRE 291
GG + Q E L K P +++ TPGR+ LS + ++V DE D L F E
Sbjct: 134 GGDSMEDQFEELTKG-PDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAE 192
Query: 292 NMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKV 351
+H+I+ + RQ ++ SAT+P ++ A++ +P LVR +
Sbjct: 193 QLHQILTQLSEN---------------RQTLLFSATLPSALAEFAKAGLREPQLVRLD-- 235
Query: 352 VPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVES-LPPALKHYYCVVRLQHKVDTL--- 407
VE+ + P LK + VR + K L
Sbjct: 236 --------------------------------VENKISPDLKLSFLTVRPEEKYSALLYL 263
Query: 408 -RRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
R I + + H + + +FKLE + + +GD+ + AR + +F+ +
Sbjct: 264 VREHISSDQQTLIFVSTKHHVEFVNSLFKLE--NIEPSVCYGDMDQDARKIHVSRFRARK 321
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTIC 520
+L+ +++ARG+D+ D V+N + P + HR GR R GR G +
Sbjct: 322 TMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFV 375
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 204/487 (41%), Gaps = 78/487 (16%)
Query: 61 PKNRTKLNKPYKALSSSSESLKNKGKPFGNNERKPVRVLDKQQIESAPFAAESFSELGLP 120
P N + N+ + + S G+ + R P Q + F + L
Sbjct: 73 PGNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLK 132
Query: 121 NVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNK 180
L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+L I P N
Sbjct: 133 RDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNV 192
Query: 181 VPQGSGEGGDSGKKLGIQALIVAPSRELGM---QIVREFEKILGMDNKKAVQQLVGGANR 237
IQA+I+ P+REL + Q+ +E K L +Q +V
Sbjct: 193 ----------------IQAMILVPTRELALQTSQVCKELSKYLN------IQVMVTTGGT 230
Query: 238 TRQEEALKKNKPA-IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRI 296
+ +++ ++ ++P ++VGTPGRI +L+ G C LV+DE D+LLS F+ ++ +
Sbjct: 231 SLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEEL 290
Query: 297 IEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLET 356
I+ + + RQ +M SAT P +V P ++ + L
Sbjct: 291 IQFLPQN---------------RQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMG 335
Query: 357 VSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDA 416
V+ YY V + KV L L
Sbjct: 336 VT----------------------------------QYYAFVEERQKVHCLNTLFSKLQI 361
Query: 417 KYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELS 476
I F N +++ + K+ G + +H + + R+ +F+NG R LV +L
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 477 ARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQKQLG 536
RG+D+ ++V+N + P S Y HR GR+GR G G + + + F + + +++LG
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 481
Query: 537 I---PIP 540
PIP
Sbjct: 482 TEIKPIP 488
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 204/487 (41%), Gaps = 78/487 (16%)
Query: 61 PKNRTKLNKPYKALSSSSESLKNKGKPFGNNERKPVRVLDKQQIESAPFAAESFSELGLP 120
P N + N+ + + S G+ + R P Q + F + L
Sbjct: 73 PGNASNANEVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTADVTATKGNEFEDYFLK 132
Query: 121 NVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNK 180
L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+L I P N
Sbjct: 133 RDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNV 192
Query: 181 VPQGSGEGGDSGKKLGIQALIVAPSRELGM---QIVREFEKILGMDNKKAVQQLVGGANR 237
IQA+I+ P+REL + Q+ +E K L +Q +V
Sbjct: 193 ----------------IQAMILVPTRELALQTSQVCKELSKYLN------IQVMVTTGGT 230
Query: 238 TRQEEALKKNKPA-IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRI 296
+ +++ ++ ++P ++VGTPGRI +L+ G C LV+DE D+LLS F+ ++ +
Sbjct: 231 SLRDDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEEL 290
Query: 297 IEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLET 356
I+ + + RQ +M SAT P +V P ++ + L
Sbjct: 291 IQFLPQN---------------RQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMG 335
Query: 357 VSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDA 416
V+ YY V + KV L L
Sbjct: 336 VT----------------------------------QYYAFVEERQKVHCLNTLFSKLQI 361
Query: 417 KYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELS 476
I F N +++ + K+ G + +H + + R+ +F+NG R LV +L
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLF 421
Query: 477 ARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQKQLG 536
RG+D+ ++V+N + P S Y HR GR+GR G G + + + F + + +++LG
Sbjct: 422 TRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELG 481
Query: 537 I---PIP 540
PIP
Sbjct: 482 TEIKPIP 488
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 184/433 (42%), Gaps = 65/433 (15%)
Query: 95 PVRVLDKQQI-----ESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKD 149
PV + KQ E+ P +F GLP ++ L + GF PT +Q+ P L+
Sbjct: 413 PVEIYRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQS 472
Query: 150 HDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELG 209
D++ + TGSGKTL YL+P + RN + G LI+AP+REL
Sbjct: 473 RDIVAIAKTGSGKTLGYLIPAFILLRHCRND------------SRNGPTVLILAPTRELA 520
Query: 210 MQIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLH 269
QI E + G ++ + L GGA + Q + L++ IVV TPGR+ ++ +
Sbjct: 521 TQIQDEALR-FGRSSRISCTCLYGGAPKGPQLKELERGA-DIVVATPGRLNDILEMKMID 578
Query: 270 THGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVP 329
LVLDE D +L F + +I+ + R RQ +M +AT P
Sbjct: 579 FQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPR---------------RQTLMYTATWP 623
Query: 330 FSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPP 389
V + A +P+ V +V L
Sbjct: 624 KEVRKIASDLLVNPVQVNIGRVDELAANK------------------------------- 652
Query: 390 ALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGD 449
A+ Y VV K L + + + + + TK+L D + + R A +HGD
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGD 712
Query: 450 LGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGR 509
+ R L +F++G+ VL+ +++ARGLD+ + +V+N + PT Y HR GRTGR
Sbjct: 713 KTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGR 772
Query: 510 LGRNGTVLTICEE 522
G G T E
Sbjct: 773 AGATGVAFTFFTE 785
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 199/429 (46%), Gaps = 69/429 (16%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
SF+++G+ ++ + GF P+ +Q AV IL+ DVI Q+ +G+GKT L +
Sbjct: 36 SFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQ 95
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
+ +V QALI++P+REL Q + + I G+ +
Sbjct: 96 VVDTSSREV----------------QALILSPTRELATQTEKTIQAI-GLHANIQAHACI 138
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
GG N ++ ++ +V GTPGR+ ++ L T + L+LDE DE+LS F++
Sbjct: 139 GG-NSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQ 197
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP--LLVRANK 350
++ + ++ P+ Q+ +VSAT+P ++ + +P +LV+ ++
Sbjct: 198 IYDVYRYLP--------PD-------LQVCLVSATLPHEILEMTSKFMTEPVKILVKRDE 242
Query: 351 VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRC 410
+ E IK + + V + + K DTL
Sbjct: 243 LT-------LEGIK---------------------------QFFVAVEKEEWKFDTLCDL 268
Query: 411 IHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVL 470
L + F N +++ + K+ + T + +HGD+ + R + +F++G+ RVL
Sbjct: 269 YDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVL 328
Query: 471 VTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKK 530
+T ++ ARG+DV + LV+N +LP + Y HR GR+GR GR G + + ++ +++
Sbjct: 329 ITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRD 388
Query: 531 LQKQLGIPI 539
+++ I
Sbjct: 389 IEQYYSTQI 397
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 189/422 (44%), Gaps = 67/422 (15%)
Query: 105 ESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTL 164
E P ++F ++ P+ L+ L+++G PT +Q +P +L D+I ++TGSGKTL
Sbjct: 90 EDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTL 149
Query: 165 AYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQ---IVREFEKILG 221
++LP++ +P +GEG AL++ PSREL Q +V +F L
Sbjct: 150 VFVLPMIILALQEEIMMPIAAGEGP--------IALVICPSRELAKQTYDVVEQFVASLV 201
Query: 222 MDNKKAVQQL--VGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLD 279
D ++ L +GG + Q + +KK IVV TPGR+ ++ A K+ CR L LD
Sbjct: 202 EDGYPRLRSLLCIGGVDMRSQLDVVKKGV-HIVVATPGRLKDILAKKKMSLDACRLLTLD 260
Query: 280 EVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSW 339
E D L+ F +++ + +H ++ RQ ++ SAT+P + A S
Sbjct: 261 EADRLVDLGFEDDIRHVFDHF---------------KSQRQTLLFSATMPAKIQIFATSA 305
Query: 340 GCDPLLVRANK--VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCV 397
P+ V + L+ + E
Sbjct: 306 LVKPVTVNVGRAGAANLDVIQEVE-----------------------------------Y 330
Query: 398 VRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARST 457
V+ + K+ L C+ V+ F + + D+ L +G+ A +HG + R
Sbjct: 331 VKQEAKIVYLLECLQKTTPP-VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDY 389
Query: 458 TLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVL 517
+ FK G+ VLV +++++GLD + V+N ++P + +Y HR GRTGR G+ G
Sbjct: 390 AISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIAT 449
Query: 518 TI 519
T
Sbjct: 450 TF 451
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 189/434 (43%), Gaps = 78/434 (17%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P L
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQ---IVREFEKILGMDNKKAVQQ 230
I P N IQA+I+ P+REL +Q + +E K L ++
Sbjct: 216 IDPENNV----------------IQAVILVPTRELALQTSQVCKELSKYL------KIEV 253
Query: 231 LVGGANRTRQEEALKKNKPA-IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNF 289
+V + +++ ++ +P ++VGTPGRI +L+ G C LV+DE D+LLS F
Sbjct: 254 MVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEF 313
Query: 290 RENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRAN 349
+ ++ +I+ + P S RQ++M SAT P +V + P ++
Sbjct: 314 QPSIEELIQFL---------PES------RQILMFSATFPVTVKSFKDRYLKKPYIINLM 358
Query: 350 KVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRR 409
+ L V+ YY V + KV L
Sbjct: 359 DQLTLMGVT----------------------------------QYYAFVEERQKVHCLNT 384
Query: 410 CIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRV 469
L I F N +++ + K+ G + +H + + R+ F+NG R
Sbjct: 385 LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRN 444
Query: 470 LVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVK 529
LV +L RG+D+ ++V+N + P S Y HR GR+GR G G + + + F +
Sbjct: 445 LVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMY 504
Query: 530 KLQKQLGI---PIP 540
+ +++LG PIP
Sbjct: 505 QTEQELGTEIKPIP 518
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 199/440 (45%), Gaps = 86/440 (19%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
ESF +GL L+ + GF P+ +Q + K DVI Q+ +G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAV 228
+ + QAL++AP+REL QI +R LG+ V
Sbjct: 99 QQL----------------DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGV----KV 138
Query: 229 QQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFN 288
VGG + R+++ + + +VVGTPGR+ ++ L + VLDE DE+LS
Sbjct: 139 HACVGGTS-VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRG 197
Query: 289 FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP--LLV 346
F++ ++ I + + + G + SAT+P + R + P +LV
Sbjct: 198 FKDQIYDIFQLLPPKIQVG---------------VFSATMPPEALEITRKFMSKPVRILV 242
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+ +++ E IK + Y V + + K++T
Sbjct: 243 KRDELT-------LEGIK---------------------------QFYVNVEKEEWKLET 268
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
L L + F+N +++ + K+ +R T + HGD+ + R +++F++G
Sbjct: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVF 526
RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR G + F
Sbjct: 329 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAIN-------F 381
Query: 527 VVKKLQKQLGI---PIPCCD 543
V + ++ L + PI CC+
Sbjct: 382 VTRDDERMLCLRTWPI-CCE 400
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 194/428 (45%), Gaps = 78/428 (18%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
ESF +GL L+ + GF P+ +Q + K DVI Q+ +G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAV 228
+ + QAL++AP+REL QI +R LG+ V
Sbjct: 99 QQL----------------DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGV----KV 138
Query: 229 QQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFN 288
VGG + R+++ + + +VVGTPGR+ ++ L + VLDE DE+LS
Sbjct: 139 HACVGGTS-VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRG 197
Query: 289 FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP--LLV 346
F++ ++ I + + + G + SAT+P + R + P +LV
Sbjct: 198 FKDQIYDIFQLLPPKIQVG---------------VFSATMPPEALEITRKFMSKPVRILV 242
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+ +++ E IK + Y V + + K++T
Sbjct: 243 KRDELT-------LEGIK---------------------------QFYVNVEKEEWKLET 268
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
L L + F+N +++ + K+ +R T + HGD+ + R +++F++G
Sbjct: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTIC---EEP 523
RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR G + +E
Sbjct: 329 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
Query: 524 EVFVVKKL 531
+F ++K
Sbjct: 389 MLFDIQKF 396
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 210/463 (45%), Gaps = 40/463 (8%)
Query: 100 DKQQIESAPFAAESFSELGLPNVLIDRL-ENEGFTVPTEVQSAAVPTILKDHDVIIQSYT 158
D + +S FA+ SFS LGL L D+L E GF PT VQ+ A+P IL DV++ + T
Sbjct: 17 DASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPT 76
Query: 159 GSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEK 218
G+GKT+AYL P++ + QG D + G AL++ P+REL +Q+ EK
Sbjct: 77 GTGKTIAYLAPLIHHL--------QGHSPKVD--RSHGTFALVIVPTRELCLQVYETLEK 126
Query: 219 ILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAE-LSAAGKLHTHGCRFLV 277
+L + ++GG + +++ L+K +I++ TPGR+ + L R+++
Sbjct: 127 LLHRFHWIVPGYVMGGEKKAKEKARLRKG-ISILIATPGRLLDHLKNTASFVHKNLRWVI 185
Query: 278 LDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAV-RQLIMVSATVPFSVVRAA 336
DE D +L + + + +II+ +G + + + + +Q +++SAT+ V A
Sbjct: 186 FDEADSILELGYGKEIEQIIKLLGSGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLA 245
Query: 337 RSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVES--LPPALKHY 394
+ DP+++ + + +S P E +P L
Sbjct: 246 KLSLDDPVMIGLDNTKLQQNLSIESPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQR 305
Query: 395 Y----CVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKL------------EA 438
Y C RL + L+ ++ V+ F + T+ D + L E
Sbjct: 306 YLRVPCGARLVALLSVLKNLFEREASQKVVVFFS-TRDAVDFHYSLLSEFQWPPNSETEE 364
Query: 439 RGM-------TATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNL 491
G LHG + + R + FK + VL++ +++ARGLD + ++
Sbjct: 365 EGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQY 424
Query: 492 ELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQKQ 534
+ P ++ Y HR GRT R+G G L + E+ +K+L+K
Sbjct: 425 DCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKH 467
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 194/428 (45%), Gaps = 78/428 (18%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
ESF +GL L+ + GF P+ +Q + K DVI Q+ +G+GKT + +L
Sbjct: 29 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 88
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAV 228
+ + QAL++AP+REL QI +R LG+ V
Sbjct: 89 QQL----------------DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGV----KV 128
Query: 229 QQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFN 288
VGG + R+++ + + +VVGTPGR+ ++ L + VLDE DE+LS
Sbjct: 129 HACVGGTS-VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRG 187
Query: 289 FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP--LLV 346
F++ ++ I + + + G + SAT+P + R + P +LV
Sbjct: 188 FKDQIYDIFQLLPPKIQVG---------------VFSATMPPEALEITRKFMSKPVRILV 232
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+ +++ E IK + Y V + + K++T
Sbjct: 233 KRDELT-------LEGIK---------------------------QFYVNVEKEEWKLET 258
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
L L + F+N +++ + K+ +R T + HGD+ + R +++F++G
Sbjct: 259 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 318
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTIC---EEP 523
RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR G + +E
Sbjct: 319 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 378
Query: 524 EVFVVKKL 531
+F ++K
Sbjct: 379 MLFDIQKF 386
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 199/441 (45%), Gaps = 74/441 (16%)
Query: 98 VLDKQQ--IESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQ 155
VLD Q S ESF +GL L+ + GF P+ +Q + K DVI Q
Sbjct: 23 VLDGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 82
Query: 156 SYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVRE 215
+ +G+GKT + +L + L QAL++AP+REL QI +
Sbjct: 83 AQSGTGKTATFCSGVLQQL----------------DYALLQCQALVLAPTRELAQQI-EK 125
Query: 216 FEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRF 275
+ LG V VGG + R+++ + + +VVGTPGR+ ++ L +
Sbjct: 126 VMRALGDYQGVKVHACVGGTS-VREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKM 184
Query: 276 LVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRA 335
VLDE DE+LS F++ ++ I + + + G + SAT+P +
Sbjct: 185 FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG---------------VFSATMPPEALEI 229
Query: 336 ARSWGCDP--LLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKH 393
R + P +LV+ +++ E IK +
Sbjct: 230 TRKFMSKPVRILVKRDELT-------LEGIK---------------------------QF 255
Query: 394 YYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKL 453
Y V + K++TL L + F+N +++ + K+ +R T + HGD+ +
Sbjct: 256 YVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN 315
Query: 454 ARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRN 513
R +++F++G RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR
Sbjct: 316 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRK 375
Query: 514 GTVL---TICEEPEVFVVKKL 531
G + T+ ++ +F ++K
Sbjct: 376 GVAINFVTLDDQRMLFDIQKF 396
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 177/407 (43%), Gaps = 60/407 (14%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
SF G P L+ + + GF+ PT +Q+ + P ++ D++ + TGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
+ +RN DS ++G L+++P+REL QI E K G ++ + L
Sbjct: 219 HLQRIRN----------DS--RMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
GGA + Q L++ IVV TPGR+ ++ ++ +LVLDE D +L F
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 324
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ +I++ + + RQ +M +AT P V + A +P V V
Sbjct: 325 IRKIVKEIPTK---------------RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVD 369
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
L ++ + VV K L + +
Sbjct: 370 ELVANK-------------------------------SITQHIEVVAPMEKQRRLEQILR 398
Query: 413 ALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVT 472
+ + + TK++ D + + R A +HGD + R L +F++G VLV
Sbjct: 399 SQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 473 NELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+++ARGLDV + VVN + P Y HR GRTGR G G T
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 204/452 (45%), Gaps = 69/452 (15%)
Query: 88 FGNNERKPVRVLDKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTIL 147
F +E RV D + + A SELG+ ++ L ++G +Q A + +
Sbjct: 83 FAISESSERRVGDSESVGGDGLA---ISELGISPEIVKALSSKGIEKLFPIQKAVLEPAM 139
Query: 148 KDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRE 207
+ D+I ++ TG+GKTLA+ +PI+ I ++ G G L++AP+RE
Sbjct: 140 EGRDMIGRARTGTGKTLAFGIPIIDKI--IKYNAKHGRGRN--------PLCLVLAPTRE 189
Query: 208 LGMQIVREF-EKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAG 266
L Q+ +EF E +D L GG +Q L + VGTPGR+ +L G
Sbjct: 190 LARQVEKEFRESAPSLDTI----CLYGGTPIGQQMRQLDYGVD-VAVGTPGRVIDLMKRG 244
Query: 267 KLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSA 326
L+ +F+VLDE D++L F E++ I+E + + RQ +M SA
Sbjct: 245 ALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK---------------RQSMMFSA 289
Query: 327 TVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVES 386
T+P + + + +PL V + V ++ +
Sbjct: 290 TMPSWIRSLTKKYLNNPLTV--------DLVGDSD-----------------------QK 318
Query: 387 LPPALKHYYCVVRLQHKVDTLRRCI--HALDAKYVIAFMNHTKQLKDVVFKLEARGMTAT 444
L + Y + + + + HA K ++ TK+ D + AR
Sbjct: 319 LADGITTYSIIADSYGRASIIGPLVTEHAKGGKCIV--FTQTKRDADRLSYALARSFKCE 376
Query: 445 ELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRA 504
LHGD+ + R TL F++G +LV +++ARGLDV DL+++ ELP ++ + HR
Sbjct: 377 ALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRT 436
Query: 505 GRTGRLGRNGTVLTICEEPEVFVVKKLQKQLG 536
GRTGR G+ G+ + I + + VK +++++G
Sbjct: 437 GRTGRAGKKGSAILIYSQDQSRAVKIIEREVG 468
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 177/407 (43%), Gaps = 60/407 (14%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
SF G P L+ + + GF+ PT +Q+ + P ++ D++ + TGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
+ +RN DS ++G L+++P+REL QI E K G ++ + L
Sbjct: 219 HLQRIRN----------DS--RMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
GGA + Q L++ IVV TPGR+ ++ ++ +LVLDE D +L F
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 324
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ +I++ + + RQ +M +AT P V + A +P V V
Sbjct: 325 IRKIVKEIPTK---------------RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVD 369
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
L ++ + VV K L + +
Sbjct: 370 ELVANK-------------------------------SITQHIEVVAPMEKQRRLEQILR 398
Query: 413 ALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVT 472
+ + + TK++ D + + R A +HGD + R L +F++G VLV
Sbjct: 399 SQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 473 NELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+++ARGLDV + VVN + P Y HR GRTGR G G T
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 177/407 (43%), Gaps = 60/407 (14%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
SF G P L+ + + GF+ PT +Q+ + P ++ D++ + TGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
+ +RN DS ++G L+++P+REL QI E K G ++ + L
Sbjct: 219 HLQRIRN----------DS--RMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
GGA + Q L++ IVV TPGR+ ++ ++ +LVLDE D +L F
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 324
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ +I++ + + RQ +M +AT P V + A +P V V
Sbjct: 325 IRKIVKEIPTK---------------RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVD 369
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
L ++ + VV K L + +
Sbjct: 370 ELVANK-------------------------------SITQHIEVVAPMEKQRRLEQILR 398
Query: 413 ALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVT 472
+ + + TK++ D + + R A +HGD + R L +F++G VLV
Sbjct: 399 SQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 473 NELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+++ARGLDV + VVN + P Y HR GRTGR G G T
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 177/407 (43%), Gaps = 60/407 (14%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
SF G P L+ + + GF+ PT +Q+ + P ++ D++ + TGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
+ +RN DS ++G L+++P+REL QI E K G ++ + L
Sbjct: 219 HLQRIRN----------DS--RMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
GGA + Q L++ IVV TPGR+ ++ ++ +LVLDE D +L F
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRISLRQISYLVLDEADRMLDMGFEPQ 324
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ +I++ + + RQ +M +AT P V + A +P V V
Sbjct: 325 IRKIVKEIPTK---------------RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVD 369
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
L ++ + VV K L + +
Sbjct: 370 ELVANK-------------------------------SITQHIEVVAPMEKQRRLEQILR 398
Query: 413 ALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVT 472
+ + + TK++ D + + R A +HGD + R L +F++G VLV
Sbjct: 399 SQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
Query: 473 NELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+++ARGLDV + VVN + P Y HR GRTGR G G T
Sbjct: 459 TDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 210/435 (48%), Gaps = 62/435 (14%)
Query: 89 GNNERKPVRVLDKQQIESAPFAA-ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTIL 147
G +E++ V V K +E A +AA ++F+E LP ++D + F P+ +QS P +L
Sbjct: 93 GESEQQKVVVTGKG-VEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLL 149
Query: 148 KDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRE 207
D+I + TGSGKTLA+ +P + + K+ GS KK+ L+++P+RE
Sbjct: 150 DGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGS-------KKVNPTCLVLSPTRE 202
Query: 208 LGMQI---VREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSA 264
L +QI +RE + G+ K++ + GG+++ Q A++ IV+GTPGR+ +L
Sbjct: 203 LAVQISDVLREAGEPCGL---KSIC-VYGGSSKGPQISAIRSGVD-IVIGTPGRLRDLIE 257
Query: 265 AGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMV 324
+ L F+VLDE D +L F E + I+ + + VRQ++M
Sbjct: 258 SNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSNTNK---------------VRQMVMF 302
Query: 325 SATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAV 384
SAT P V + A+ + DP P++ + + + L + +A
Sbjct: 303 SATWPLDVHKLAQEF-MDP--------NPIKVIIGS--VDLAANHDVMQIIEVLDERARD 351
Query: 385 ESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTAT 444
+ L L+ Y HK R + AL + ++L+ L+ RG A
Sbjct: 352 QRLIALLEKY-------HKSQKNRVLVFAL-------YKVEAERLERF---LQQRGWKAV 394
Query: 445 ELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRA 504
+HG+ + R+ +L FK G +LV +++ARGLD+ + ++V+N P + Y HR
Sbjct: 395 SIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRI 454
Query: 505 GRTGRLGRNGTVLTI 519
GRTGR G+ G T
Sbjct: 455 GRTGRAGKKGVAHTF 469
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 198/429 (46%), Gaps = 70/429 (16%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
+ ++LG+ ++ L+ G +Q A + ++ D+I ++ TG+GKTLA+ +PI+
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREF-EKILGMDNKKAVQQL 231
I K +G Q L++AP+REL Q+ +EF E +D L
Sbjct: 177 KIIKFNAKHGRGKNP----------QCLVLAPTRELARQVEKEFRESAPSLDTI----CL 222
Query: 232 VGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRE 291
GG +Q L + VGTPGRI +L G L+ +F+VLDE D++L F E
Sbjct: 223 YGGTPIGQQMRELNYGID-VAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAE 281
Query: 292 NMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKV 351
++ I++ + A RQ +M SAT+P + + + +PL +
Sbjct: 282 DVEIILQKL---------------PAKRQSMMFSATMPSWIRSLTKKYLNNPLTI----- 321
Query: 352 VPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHY----YCVVRLQHKVDTL 407
+ V ++ KL +A++ + P +K + C+V Q K D
Sbjct: 322 ---DLVGDSDQ-KLADGITMYSIAADSYGRASI--IGPLVKEHGKGGKCIVFTQTKRDAD 375
Query: 408 RRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEV 467
R + F L A+ LHGD+ + R TL F++G
Sbjct: 376 R-----------------------LAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNF 411
Query: 468 RVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFV 527
+LV +++ARGLDV DLV++ ELP ++ + HR GRTGR G+ G+ + I + +
Sbjct: 412 SILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRA 471
Query: 528 VKKLQKQLG 536
VK ++K++G
Sbjct: 472 VKMIEKEVG 480
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 193/428 (45%), Gaps = 83/428 (19%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
ESF +GL L+ GF P+ +Q + K DVI Q+ +G+GKT + +L
Sbjct: 39 ESFDAMGLQENLL-----RGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAV 228
+ + QAL++AP+REL QI +R LG+ V
Sbjct: 94 QQL----------------DFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGV----KV 133
Query: 229 QQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFN 288
VGG + R+++ + + +VVGTPGR+ ++ L + VLDE DE+LS
Sbjct: 134 HACVGGTS-VREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSRG 192
Query: 289 FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP--LLV 346
F++ ++ I + + + G + SAT+P + R + P +LV
Sbjct: 193 FKDQIYDIFQLLPPKIQVG---------------VFSATMPPEALEITRKFMSKPVRILV 237
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+ +++ E IK + Y V + + K++T
Sbjct: 238 KRDELT-------LEGIK---------------------------QFYVNVEKEEWKLET 263
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
L L + F+N +++ + K+ +R T + HGD+ + R +++F++G
Sbjct: 264 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 323
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTIC---EEP 523
RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR G + +E
Sbjct: 324 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 383
Query: 524 EVFVVKKL 531
+F ++K
Sbjct: 384 MLFDIQKF 391
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 184/435 (42%), Gaps = 73/435 (16%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P + F + P+ +++ + GFT PT +Q+ P LK D+I + TGSGKTLAYL
Sbjct: 161 PKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 220
Query: 168 LPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKA 227
LP L + + P+ G+ G LI+AP+REL +QI E K G+ +
Sbjct: 221 LPALVHV----SAQPR-------LGQDDGPIVLILAPTRELAVQIQEESRK-FGLRSGVR 268
Query: 228 VQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSF 287
+ GGA + Q L++ IV+ TPGR+ ++ + +LVLDE D +L
Sbjct: 269 STCIYGGAPKGPQIRDLRRGV-EIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDM 327
Query: 288 NFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLL-- 345
F + +I+ + R RQ ++ SAT P V AR + DP
Sbjct: 328 GFEPQIRKIVSQI---------------RPDRQTLLWSATWPREVETLARQFLRDPYKAI 372
Query: 346 -----VRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRL 400
++AN+ + +E +P K+ + L
Sbjct: 373 IGSTDLKANQSI----------------------------NQVIEIVPTPEKYNRLLTLL 404
Query: 401 QHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLK 460
+ +D ++ F+ + V +L G A +HGD + R L
Sbjct: 405 K----------QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLA 454
Query: 461 KFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTIC 520
+FK+G ++ +++ARGLDV + VVN + P Y HR GRTGR G G T
Sbjct: 455 EFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFF 514
Query: 521 EEPEVFVVKKLQKQL 535
++L K L
Sbjct: 515 THDNAKFARELVKIL 529
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 198/441 (44%), Gaps = 79/441 (17%)
Query: 98 VLDKQQ--IESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQ 155
VLD Q S ESF +GL L+ GF P+ +Q + K DVI Q
Sbjct: 23 VLDGQDEFFTSYDEVHESFDAMGLQENLL-----RGFEKPSAIQQRGIVPFCKGLDVIQQ 77
Query: 156 SYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVRE 215
+ +G+GKT + +L + L QAL++AP+REL QI +
Sbjct: 78 AQSGTGKTATFCSGVLQQL----------------DYALLQCQALVLAPTRELAQQI-EK 120
Query: 216 FEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRF 275
+ LG V VGG + R+++ + + +VVGTPGR+ ++ L +
Sbjct: 121 VMRALGDYQGVKVHACVGGTS-VREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKM 179
Query: 276 LVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRA 335
VLDE DE+LS F++ ++ I + + + G + SAT+P +
Sbjct: 180 FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG---------------VFSATMPPEALEI 224
Query: 336 ARSWGCDP--LLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKH 393
R + P +LV+ +++ E IK +
Sbjct: 225 TRKFMSKPVRILVKRDELT-------LEGIK---------------------------QF 250
Query: 394 YYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKL 453
Y V + K++TL L + F+N +++ + K+ +R T + HGD+ +
Sbjct: 251 YVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN 310
Query: 454 ARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRN 513
R +++F++G RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR
Sbjct: 311 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRK 370
Query: 514 GTVL---TICEEPEVFVVKKL 531
G + T+ ++ +F ++K
Sbjct: 371 GVAINFVTLDDQRMLFDIQKF 391
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 189/427 (44%), Gaps = 69/427 (16%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+L
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVG 233
I N IQA+I+ P+REL +Q + K LG K V G
Sbjct: 193 IDQDNNV----------------IQAVIIVPTRELALQ-TSQVCKELGKHLKIQVMVTTG 235
Query: 234 GANRTRQEEALKKNKPA-IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
G + +++ ++ +P ++VGTPGRI +L+ G C LV+DE D+LLS F+ +
Sbjct: 236 GT--SLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPS 293
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ +I + P S RQ++M SAT P +V + +P ++ +
Sbjct: 294 VEHLISFL---------PES------RQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL 338
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
L+ ++ +Y V + K+ L
Sbjct: 339 TLKGIT----------------------------------QFYAFVEERQKIHCLNTLFS 364
Query: 413 ALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVT 472
L I F N +++ + K+ G + +H + + R+ F+NG R LV
Sbjct: 365 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 424
Query: 473 NELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQ 532
+L RG+D+ ++V+N + P ++ Y HR GR+GR G G + + + F + +++
Sbjct: 425 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIE 484
Query: 533 KQLGIPI 539
++LG I
Sbjct: 485 QELGTEI 491
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 189/427 (44%), Gaps = 69/427 (16%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+L
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVG 233
I N IQA+I+ P+REL +Q + K LG K V G
Sbjct: 193 IDQDNNV----------------IQAVIIVPTRELALQ-TSQVCKELGKHLKIQVMVTTG 235
Query: 234 GANRTRQEEALKKNKPA-IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
G + +++ ++ +P ++VGTPGRI +L+ G C LV+DE D+LLS F+ +
Sbjct: 236 GT--SLKDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPS 293
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ +I + P S RQ++M SAT P +V + +P ++ +
Sbjct: 294 VEHLISFL---------PES------RQILMFSATFPVTVKDFKDRFLTNPYVINLMDEL 338
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
L+ ++ +Y V + K+ L
Sbjct: 339 TLKGIT----------------------------------QFYAFVEERQKIHCLNTLFS 364
Query: 413 ALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVT 472
L I F N +++ + K+ G + +H + + R+ F+NG R LV
Sbjct: 365 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 424
Query: 473 NELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQ 532
+L RG+D+ ++V+N + P ++ Y HR GR+GR G G + + + F + +++
Sbjct: 425 TDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIE 484
Query: 533 KQLGIPI 539
++LG I
Sbjct: 485 QELGTEI 491
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 171/389 (43%), Gaps = 60/389 (15%)
Query: 131 GFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGD 190
GF+ P+ +Q+ + P +++ D++ + TGSGKTL YL+P + + N
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHND---------- 297
Query: 191 SGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPA 250
++G L+++P+REL QI E K G +K + L GGA + Q + +++
Sbjct: 298 --SRMGPTILVLSPTRELATQIQVEALK-FGKSSKISCACLYGGAPKGPQLKEIERGV-D 353
Query: 251 IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADP 310
IVV TPGR+ ++ ++ H +LVLDE D +L F + +I+ V +
Sbjct: 354 IVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTK------- 406
Query: 311 NSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXX 370
RQ +M +AT P V + A +P V V L
Sbjct: 407 --------RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDEL---------------- 442
Query: 371 XXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLK 430
QT +E L P KH L + + + + I TK++
Sbjct: 443 -VANKSITQT---IEVLAPMEKH-----------SRLEQILRSQEPGSKIIIFCSTKRMC 487
Query: 431 DVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVN 490
D + + R A +HGD + R L +F++G VLV +++ARGLDV + +VVN
Sbjct: 488 DQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVKDIRVVVN 547
Query: 491 LELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
+ P Y HR GRTGR G G T
Sbjct: 548 YDFPNGVEDYVHRIGRTGRAGATGLAYTF 576
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 193/427 (45%), Gaps = 75/427 (17%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
+SF + L L+ + GF P+ +Q + K DVI Q+ +G+GKT + +L
Sbjct: 41 DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVL 100
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAV 228
+ + QAL++AP+REL QI +R LG+
Sbjct: 101 QQLDI----------------SLVQCQALVLAPTRELAQQIEKVMRALGDYLGV----KA 140
Query: 229 QQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFN 288
Q VGG + R+++ + ++ +VVGTPGR+ +L L + VLDE DE+LS
Sbjct: 141 QACVGGTS-VREDQRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRG 199
Query: 289 FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP--LLV 346
F++ ++ I + + + G + SAT+P + R + P +LV
Sbjct: 200 FKDQIYDIFQLLPSKVQVG---------------VFSATMPPEALEITRKFMNKPVRILV 244
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+ +++ E IK + Y V + + K++T
Sbjct: 245 KRDELT-------LEGIK---------------------------QFYVNVDKEEWKLET 270
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
L L + F+N +++ + K+ +R T + HGD+ + R +++F++G
Sbjct: 271 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 330
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVF 526
RVL+T +L ARG+DV + LV+N +LPT +Y HR GR+GR GR G + +
Sbjct: 331 SRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDER 390
Query: 527 VVKKLQK 533
++ +Q+
Sbjct: 391 MMADIQR 397
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 195/436 (44%), Gaps = 73/436 (16%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P S+ E L + L+ +E G+ P+ +Q AA+P L+ DVI + TGSGKT A++
Sbjct: 309 PRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFV 368
Query: 168 LPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVRE---FEKILGMDN 224
LP+L+ I +++P S E G A+++AP+REL QI E F LG
Sbjct: 369 LPMLAYI----SRLPPMSEENETEGP----YAVVMAPTRELAQQIEEETVKFAHYLGF-- 418
Query: 225 KKAVQQLVGGANRTRQEEALKKNKPA-IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDE 283
V +VGG ++ +E+ LK + IV+ TPGR+ + + C ++VLDE D
Sbjct: 419 --RVTSIVGG--QSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADR 474
Query: 284 LLSFNFRENMHRIIEHVGRRSGAGADPNSN-----------AERAVRQLIMVSATVPFSV 332
++ F + +++ A P+SN ++ R M SAT+P V
Sbjct: 475 MIDMGFEPQVAGVLD---------AMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGV 525
Query: 333 VRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALK 392
R AR + +P++V + T L +
Sbjct: 526 ERLARKYLRNPVVV------------------------------TIGTAGKTTDL---IS 552
Query: 393 HYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGK 452
+ +++ K L++ + L K I F+N K + L+ G T LHG +
Sbjct: 553 QHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQ 612
Query: 453 LARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGR 512
R +L+ F+ VLV ++ RG+D+ + V+N ++P Y HR GRTGR G+
Sbjct: 613 EQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGK 672
Query: 513 NG--TVLTICEEPEVF 526
+G T + EVF
Sbjct: 673 SGVATSFLTLHDTEVF 688
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 193/428 (45%), Gaps = 65/428 (15%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
+SF ++G+ + ++ + + G+ P+E+Q A+ ILK DVI Q+ +G+GKT + +
Sbjct: 22 KSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC 81
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQL 231
+ KV Q L+++PSREL Q + + I N +A
Sbjct: 82 QIVNISSRKV----------------QVLVLSPSRELASQTEKTIQAIGAHTNIQA-HAC 124
Query: 232 VGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRE 291
+GG + + L++ A V GTPGR+ ++ G L T + LVLDE DE+LS ++
Sbjct: 125 IGGKSIGEDIKKLERGVHA-VSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKD 183
Query: 292 NMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKV 351
++ + A P+ Q+ ++SAT+P ++ + DP+ +
Sbjct: 184 QIYDVYR---------ALPHDI------QVCLISATLPQEILEMTEKFMTDPVRI----- 223
Query: 352 VPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCI 411
V P E +L ++Y V + + K DTL
Sbjct: 224 ----LVKPDEL-----------------------TLEGIKQYYVDVDKEEWKFDTLCDLY 256
Query: 412 HALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLV 471
L I F N +++ + K+ + + +HGD + R + +F++ + RVL+
Sbjct: 257 GRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLI 316
Query: 472 TNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKL 531
+++ ARG+DV V+N ++P + Y HR GR GR GR G + + ++ +K +
Sbjct: 317 ASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDI 376
Query: 532 QKQLGIPI 539
++ G I
Sbjct: 377 ERHYGTKI 384
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 189/435 (43%), Gaps = 80/435 (18%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
++F + G + ++ ++ + + PT +Q A+P +L DVI + TGSGKT A++LP++
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAV 228
I P+ + G G +I AP+REL QI ++F K G+ V
Sbjct: 288 VHI----MDQPELQRDEGPIG-------VICAPTRELAHQIFLEAKKFSKAYGL----RV 332
Query: 229 QQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFN 288
+ GG ++ Q + LK IVV TPGR+ ++ L +LVLDE D +
Sbjct: 333 SAVYGGMSKHEQFKELKAG-CEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDLG 391
Query: 289 FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRA 348
F + I+ + R RQ ++ SAT+P+ V + AR DP+ V
Sbjct: 392 FEPQVRSIVGQI---------------RPDRQTLLFSATMPWKVEKLAREILSDPIRVTV 436
Query: 349 NKV-------VPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQ 401
+V + V P++ KL P L
Sbjct: 437 GEVGMANEDITQVVNVIPSDAEKL-----------------------PWL---------- 463
Query: 402 HKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKK 461
L + +D V+ F + + ++ +L LHGD + +R TL+K
Sbjct: 464 -----LEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQK 518
Query: 462 FKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLG-RNGTVLTIC 520
FK+G VL+ +++ARGLD+ VVN ++ D + HR GRTGR G R+G T+
Sbjct: 519 FKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLV 578
Query: 521 EEPEVFVVKKLQKQL 535
+ E +L L
Sbjct: 579 TQREARFAGELVNSL 593
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/440 (27%), Positives = 199/440 (45%), Gaps = 80/440 (18%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
+ + GL + ++D ++ + P +Q+ A+P I+ D I + TGSGKTL ++LP+L
Sbjct: 193 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 252
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAVQQ 230
I +++ P +G+G +G L++AP+REL QI +R+F K LG+
Sbjct: 253 I---KDQPPVEAGDG-----PIG---LVMAPTRELVQQIHSDIRKFSKPLGI----RCVP 297
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAEL--SAAGKL-HTHGCRFLVLDEVDELLSF 287
+ GG+ +Q LK+ IVV TPGR+ ++ +++GK+ + FLV+DE D +
Sbjct: 298 VYGGSGVAQQISELKRGT-EIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDM 356
Query: 288 NFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVR 347
F + RII+++ R RQ ++ SAT P V AR
Sbjct: 357 GFEPQITRIIQNI---------------RPERQTVLFSATFPRQVETLAR---------- 391
Query: 348 ANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTL 407
KV+ +P+++ Q +V ++ + D
Sbjct: 392 --KVL-------NKPVEIQVGGRSVVNKDITQ-----------------LVEVRPESDRF 425
Query: 408 RRCIHAL----DAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFK 463
R + L + ++ F+ ++ + + LHG + R +T+ FK
Sbjct: 426 LRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFK 485
Query: 464 NGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEP 523
N +L+ ++ARGLDV E +LVVN + P Y HR GRTGR GR G +T E
Sbjct: 486 NDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED 545
Query: 524 EVFVVKKLQKQLGI---PIP 540
+ L K L + P+P
Sbjct: 546 DAKYAPDLVKALELSEQPVP 565
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 187/426 (43%), Gaps = 51/426 (11%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P +F+++ L + L + + PT VQ A+P +L + D++ + TGSGKT A+
Sbjct: 147 PPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFC 206
Query: 168 LPILSAIGPLRN-KVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKK 226
PI+S I ++ + P+GS + + A+I++P+REL QI E +K K
Sbjct: 207 FPIISGIMKDQHVERPRGS-------RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVK 259
Query: 227 AVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLS 286
V GG +Q L++ I+V TPGR+ +L ++ RFL LDE D +L
Sbjct: 260 VVVAY-GGTPIHQQLRELERGC-DILVATPGRLNDLLERARVSMQMIRFLALDEADRMLD 317
Query: 287 FNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLV 346
F + +I+E + R VRQ ++ SAT P + R A + + + +
Sbjct: 318 MGFEPQIRKIVEQM-----------DMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFL 366
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+V + TQ VE + + K H +D
Sbjct: 367 AVGRV---------------------GSSTDLITQ-RVEFVQESDKR-------SHLMDL 397
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFK-LEARGMTATELHGDLGKLARSTTLKKFKNG 465
L D + + TK+ D + L AT +HGD + R L+ FK G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 466 EVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEV 525
+LV +++ARGLD+ VVN +LP D Y HR GRTGR G++G E
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNA 517
Query: 526 FVVKKL 531
+ + L
Sbjct: 518 QLARSL 523
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 187/426 (43%), Gaps = 51/426 (11%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P +F+++ L + L + + PT VQ A+P +L + D++ + TGSGKT A+
Sbjct: 147 PPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFC 206
Query: 168 LPILSAIGPLRN-KVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKK 226
PI+S I ++ + P+GS + + A+I++P+REL QI E +K K
Sbjct: 207 FPIISGIMKDQHVERPRGS-------RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVK 259
Query: 227 AVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLS 286
V GG +Q L++ I+V TPGR+ +L ++ RFL LDE D +L
Sbjct: 260 VVVAY-GGTPIHQQLRELERGC-DILVATPGRLNDLLERARVSMQMIRFLALDEADRMLD 317
Query: 287 FNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLV 346
F + +I+E + R VRQ ++ SAT P + R A + + + +
Sbjct: 318 MGFEPQIRKIVEQM-----------DMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFL 366
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+V + TQ VE + + K H +D
Sbjct: 367 AVGRV---------------------GSSTDLITQ-RVEFVQESDKR-------SHLMDL 397
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFK-LEARGMTATELHGDLGKLARSTTLKKFKNG 465
L D + + TK+ D + L AT +HGD + R L+ FK G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 466 EVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEV 525
+LV +++ARGLD+ VVN +LP D Y HR GRTGR G++G E
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNA 517
Query: 526 FVVKKL 531
+ + L
Sbjct: 518 QLARSL 523
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 187/426 (43%), Gaps = 51/426 (11%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P +F+++ L + L + + PT VQ A+P +L + D++ + TGSGKT A+
Sbjct: 147 PPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFC 206
Query: 168 LPILSAIGPLRN-KVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKK 226
PI+S I ++ + P+GS + + A+I++P+REL QI E +K K
Sbjct: 207 FPIISGIMKDQHVERPRGS-------RAVYPFAVILSPTRELACQIHDEAKKFSYQTGVK 259
Query: 227 AVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLS 286
V GG +Q L++ I+V TPGR+ +L ++ RFL LDE D +L
Sbjct: 260 VVVAY-GGTPIHQQLRELERGC-DILVATPGRLNDLLERARVSMQMIRFLALDEADRMLD 317
Query: 287 FNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLV 346
F + +I+E + R VRQ ++ SAT P + R A + + + +
Sbjct: 318 MGFEPQIRKIVEQM-----------DMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFL 366
Query: 347 RANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDT 406
+V + TQ VE + + K H +D
Sbjct: 367 AVGRV---------------------GSSTDLITQ-RVEFVQESDKR-------SHLMDL 397
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFK-LEARGMTATELHGDLGKLARSTTLKKFKNG 465
L D + + TK+ D + L AT +HGD + R L+ FK G
Sbjct: 398 LHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTG 457
Query: 466 EVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEV 525
+LV +++ARGLD+ VVN +LP D Y HR GRTGR G++G E
Sbjct: 458 RTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFNENNA 517
Query: 526 FVVKKL 531
+ + L
Sbjct: 518 QLARSL 523
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 186/411 (45%), Gaps = 47/411 (11%)
Query: 105 ESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTL 164
++ P +F+E+ L L + + PT VQ A+P +L+ D++ + TGSGKT
Sbjct: 152 DNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTA 211
Query: 165 AYLLPILSAIGPLRN-KVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMD 223
A+ PI+S I ++ + P+GS + + A+I++P+REL QI E +K
Sbjct: 212 AFCFPIISGIMKDQHVQRPRGS-------RTVYPLAVILSPTRELASQIHDEAKKFSYQT 264
Query: 224 NKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDE 283
K V GG +Q L++ I+V TPGR+ +L ++ RFL LDE D
Sbjct: 265 GVKVVVAY-GGTPINQQLRELERGV-DILVATPGRLNDLLERARVSMQMIRFLALDEADR 322
Query: 284 LLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP 343
+L F + +I+E + R VRQ ++ SAT P + R A + +
Sbjct: 323 MLDMGFEPQIRKIVEQM-----------DMPPRGVRQTLLFSATFPREIQRLAADFLANY 371
Query: 344 LLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHK 403
+ + +V + Q VE + + K + + L +
Sbjct: 372 IFLAVGRV---------------------GSSTDLIVQ-RVEFVLDSDKRSHLMDLLHAQ 409
Query: 404 VDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFK 463
+ + AL + F+ + + L G AT +HGD + R LK FK
Sbjct: 410 RENGIQGKQAL----TLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFK 465
Query: 464 NGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNG 514
+G +LV +++ARGLD+ VVN +LP D Y HR GRTGR G++G
Sbjct: 466 SGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 516
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 191/403 (47%), Gaps = 65/403 (16%)
Query: 138 VQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGD--SGKKL 195
V++ VP L+ D+I ++ TG+GKTLA+ +PI+ + + E GD + ++
Sbjct: 36 VRAVLVPA-LQGRDIIARAKTGTGKTLAFGIPIIKRL----------TEEAGDYTAFRRS 84
Query: 196 GI--QALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVV 253
G + L++AP+REL Q+ +E ++ + V GG + T Q+ AL + +VV
Sbjct: 85 GRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCV---YGGVSYTIQQSALTRGVD-VVV 140
Query: 254 GTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSN 313
GTPGRI +L L +LVLDE D++L+ F E + I+E++ +
Sbjct: 141 GTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTK---------- 190
Query: 314 AERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXX 373
RQ ++ SAT+P V + AR + +PL + +V + AE IKL
Sbjct: 191 -----RQSMLFSATMPTWVKKLARKYLDNPLNI---DLVGDQDEKLAEGIKLYAIATTST 242
Query: 374 XXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVV 433
+ + ++A K ++ TK+ D V
Sbjct: 243 SKRTILSDLIT--------------------------VYAKGGKTIV--FTQTKRDADEV 274
Query: 434 FKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLEL 493
+ + LHGD+ + R TL F+ G+ VLV ++++RGLD+ DLV++ EL
Sbjct: 275 SLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYEL 334
Query: 494 PTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQKQLG 536
P D + HR+GRTGR G+ G+ + + + V+ L++ +G
Sbjct: 335 PNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVG 377
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 202/440 (45%), Gaps = 80/440 (18%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
+ + GL + ++D ++ + P +Q+ A+P I+ D I + TGSGKTL ++LP+L
Sbjct: 531 WHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 590
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDNKKAVQQ 230
I +++ P +G+G +G L++AP+REL QI +R+F K LG+
Sbjct: 591 I---KDQPPVEAGDG-----PIG---LVMAPTRELVQQIHSDIRKFSKPLGI----RCVP 635
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAEL--SAAGKL-HTHGCRFLVLDEVDELLSF 287
+ GG+ +Q LK+ IVV TPGR+ ++ +++GK+ + FLV+DE D +
Sbjct: 636 VYGGSGVAQQISELKRGT-EIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDM 694
Query: 288 NFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVR 347
F + RII+++ R RQ ++ SAT P V AR
Sbjct: 695 GFEPQITRIIQNI---------------RPERQTVLFSATFPRQVETLAR---------- 729
Query: 348 ANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTL 407
KV+ +P+++ Q S+ K +V ++ + D
Sbjct: 730 --KVL-------NKPVEI---------------QVGGRSV--VNKDITQLVEVRPESDRF 763
Query: 408 RRCIHAL----DAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFK 463
R + L + ++ F+ ++ + + LHG + R +T+ FK
Sbjct: 764 LRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFK 823
Query: 464 NGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEP 523
N +L+ ++ARGLDV E +LVVN + P Y HR GRTGR GR G +T E
Sbjct: 824 NDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISED 883
Query: 524 EVFVVKKLQKQLGI---PIP 540
+ L K L + P+P
Sbjct: 884 DAKYAPDLVKALELSEQPVP 903
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 193/428 (45%), Gaps = 53/428 (12%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
E+F ELGL ++ L+ VPTE+Q +P +++ V++ S+TGSGKTLAYLLPI+
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQL 231
+ + G K + +++ P+REL Q+ R + I +++ L
Sbjct: 172 QLMR-------EDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHARFRSI--L 222
Query: 232 VGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRE 291
V G +R R +E N +VVGTPGRI + G + +LVLDE D + F
Sbjct: 223 VSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEGNMVYGDIAYLVLDEADTMFDRGFGP 282
Query: 292 NMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKV 351
+ + + + +R+ D Q ++V+AT+ +V K+
Sbjct: 283 EIRKFLAPLNQRALKTNDQGF-------QTVLVTATMTMAV----------------QKL 319
Query: 352 VPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCI 411
V E ++T + + A + + + K++ L + +
Sbjct: 320 VDEE----------------FQGIEHLRTSTLHKKIANARHDFIKLSGGEDKLEALLQVL 363
Query: 412 HALDAK--YVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKN--GEV 467
AK V+ F N + V L ++ HG++ R LKKFK+ G+
Sbjct: 364 EPSLAKGSKVMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDC 423
Query: 468 RVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFV 527
LV +L+ARGLD+ + D VV + P +SI Y HR GRT R+G G V ++ + +
Sbjct: 424 PTLVCTDLAARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQML 482
Query: 528 VKKLQKQL 535
++++ +
Sbjct: 483 AARIEEAM 490
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 195/456 (42%), Gaps = 77/456 (16%)
Query: 104 IESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKT 163
++ F A++F EL L L+ E G+ PT +Q+A +P L D+ + TGSGKT
Sbjct: 159 VDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKT 218
Query: 164 LAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMD 223
A+ LP L + +V + LI+ P+REL +QI + +
Sbjct: 219 AAFALPTLERLLFRPKRV-------------FATRVLILTPTRELAVQIHSMIQNLAQFT 265
Query: 224 NKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGR-IAELSAAGKLHTHGCRFLVLDEVD 282
+ K L+ G R++E + ++ P IVV TPGR I L + + L+LDE D
Sbjct: 266 DIKC--GLIVGGLSVREQEVVLRSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEAD 323
Query: 283 ELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCD 342
LL F + ++ +R RQ ++ SAT+
Sbjct: 324 RLLQTGFATEITELVRLCPKR---------------RQTMLFSATM-------------- 354
Query: 343 PLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQH 402
+V L +S +P++L PP L +R
Sbjct: 355 -----TEEVKELVKLSLNKPLRLSADPSARR--------------PPGLTEEVVRIRRTR 395
Query: 403 KVDT----LRRCIHALDAKYVIAFMNHTKQ----LKDVVFKLEARGMTATELHGDLGKLA 454
+ + L C +K +I + TKQ LK ++F L G+ A ELHG+L +
Sbjct: 396 EANQEAVLLSLCTRTFKSKVII--FSGTKQAAHRLK-ILFGLA--GLKAAELHGNLTQAQ 450
Query: 455 RSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNG 514
R +L+ F+ EV L+ +++ARGLD+ V+N P + Y HR GRT R GR G
Sbjct: 451 RLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREG 510
Query: 515 TVLTICEEPEVFVVKKLQKQLGIPIPCCDITEGKLV 550
+T + + ++K + K++G + I E +V
Sbjct: 511 YAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIV 546
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 182/431 (42%), Gaps = 65/431 (15%)
Query: 111 AESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPI 170
+ F + L L+ + + GF P+EVQ +P + DVI Q+ +G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 171 LSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQ 230
L I P +V AL++ +REL QI EF + V
Sbjct: 105 LQQIEPSPGQV----------------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELL-SFNF 289
GG N ++ LK P IVVGTPGR+ L+ L R +LDE D++L S +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 290 RENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRAN 349
R ++ I + P+ +Q++M SAT+ + + + DP+ + +
Sbjct: 209 RRDVQEIFKMT---------PHD------KQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
Query: 350 KVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRR 409
L +L ++HY + ++ K L
Sbjct: 254 DEAKL-------------------------------TLHGLVQHYIKLSEME-KNRKLND 281
Query: 410 CIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRV 469
+ ALD V+ F+ + ++ L + +H + + R T K FK G R+
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 470 LVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLT-ICEEPEVFVV 528
LV +L RG+D+ ++V+N ++P + Y HR GR GR G G +T + + V+
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVL 401
Query: 529 KKLQKQLGIPI 539
++Q++ + I
Sbjct: 402 NQVQERFEVDI 412
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 182/431 (42%), Gaps = 65/431 (15%)
Query: 111 AESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPI 170
+ F + L L+ + + GF P+EVQ +P + DVI Q+ +G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 171 LSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQ 230
L I P +V AL++ +REL QI EF + V
Sbjct: 105 LQQIEPSPGQV----------------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELL-SFNF 289
GG N ++ LK P IVVGTPGR+ L+ L R +LDE D++L S +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 290 RENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRAN 349
R ++ I + P+ +Q++M SAT+ + + + DP+ + +
Sbjct: 209 RRDVQEIFKMT---------PHD------KQVMMFSATLSKEIRPVCKKFMQDPMEIYVD 253
Query: 350 KVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRR 409
L +L ++HY + ++ K L
Sbjct: 254 DEAKL-------------------------------TLHGLVQHYIKLSEME-KNRKLND 281
Query: 410 CIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRV 469
+ ALD V+ F+ + ++ L + +H + + R T K FK G R+
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 470 LVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLT-ICEEPEVFVV 528
LV +L RG+D+ ++V+N ++P + Y HR GR GR G G +T + + V+
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVL 401
Query: 529 KKLQKQLGIPI 539
++Q++ + I
Sbjct: 402 NQVQERFEVDI 412
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 193/422 (45%), Gaps = 61/422 (14%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
F + L + + +++ GF T VQ A +P IL+ DV+ ++ TG+GKT+A+LLP + A
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVG 233
+ K P S + ++ I L+V P+REL Q E +L VQ ++G
Sbjct: 444 V----IKSPPASRD----SRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIG 495
Query: 234 GANRTRQEEALKKNKPAIVVGTPGRIA---ELSAAGKLHTHGCRFLVLDEVDELLSFNFR 290
G ++ ++ N I+V TPGR+ E ++ G + LVLDE D LL FR
Sbjct: 496 GTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFR 555
Query: 291 ENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANK 350
++ RII V ++ RQ + SATVP V + C L R ++
Sbjct: 556 RDIERIIAAVPKQ---------------RQTFLFSATVPEEVRQI-----CHVALKRDHE 595
Query: 351 VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYC--VVRLQHKVDTLR 408
+ E M A+++ +H+ V+ +H D
Sbjct: 596 FINCVQEGSGE---------THQKVTQMYMIASLD------RHFSLLHVLLKEHIADN-- 638
Query: 409 RCIHALDAKYVIAFMNH--TKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
+D K +I T+ + D++ +L + E+H + R+ +F+ +
Sbjct: 639 -----VDYKVIIFCTTAMVTRLVADLLSQLS---LNVREIHSRKPQSYRTRVSDEFRKSK 690
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGT-VLTICEEPEV 525
+LVT+++SARG+D + LVV + LP+D Y HR GRTGR G+ G VL + E
Sbjct: 691 AIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEY 750
Query: 526 FV 527
F+
Sbjct: 751 FM 752
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 116/453 (25%), Positives = 209/453 (46%), Gaps = 61/453 (13%)
Query: 100 DKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTG 159
+KQ+ + ++A+ F E + + + L G T VQ A + L D ++++ TG
Sbjct: 316 EKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAKTG 375
Query: 160 SGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKI 219
+GK++A+LLP + + N SG+G + K I ALI+ P+REL QI E + +
Sbjct: 376 TGKSMAFLLPAIETVLKAMN-----SGKGVN--KVAPIFALILCPTRELASQIAAEGKAL 428
Query: 220 LGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRI---AELSAAGKLHTHGCRFL 276
L + VQ L+GG ++ L+ I++ TPGR+ E + +
Sbjct: 429 LKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLF 488
Query: 277 VLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAA 336
++DE D LL FR ++ +II+ + R+ RQ ++ SAT+P V R +
Sbjct: 489 IVDEADLLLDLGFRRDVEKIIDCLPRQ---------------RQSLLFSATIPKEVRRVS 533
Query: 337 RSWGCDPLLVRAN----KVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALK 392
+ L+++ + + L V + ++ Q+ + + P
Sbjct: 534 Q------LVLKRDHSYIDTIGLGCVETHDKVR----------------QSCI--VAPHES 569
Query: 393 HYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFK-LEARGMTATELHGDLG 451
H++ V L L+ I+ +I F + T + +++ L + E+H
Sbjct: 570 HFHLVPHL------LKEHINNTPDYKIIVFCS-TGMVTSLMYTLLREMKLNVREIHARKP 622
Query: 452 KLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLG 511
+L R+ +FK +LVT+++SARG++ + LV+ + +P+D Y HR GRTGR G
Sbjct: 623 QLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG 682
Query: 512 RNGTVLTICEEPEVFVVKKLQKQLGIPIPCCDI 544
+ G L + E + + +L+ PIP D+
Sbjct: 683 KGGEGLLLIAPWERYFLDELKDLPLEPIPAPDL 715
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 122/478 (25%), Positives = 199/478 (41%), Gaps = 63/478 (13%)
Query: 71 YKALSSSSESLKNKGKPFGNNERKPVRVLDKQQI----------------ESAPFAAESF 114
+ A S + + PFGN+ V +++ ++ P +F
Sbjct: 89 WNARSGGWDRRDTETNPFGNDGNADPAVNEQENTVINFEAYEDIPIETSGDNVPPPVNTF 148
Query: 115 SELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAI 174
+E+ L L ++ + PT VQ A+P + D++ + TGSGKT A+ PI+S I
Sbjct: 149 AEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGI 208
Query: 175 GPLRN-KVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVG 233
++ + P+G + + A+I++P+REL QI E K K V G
Sbjct: 209 MKDQHIERPRGV-------RGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAY-G 260
Query: 234 GANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENM 293
G +Q L++ I+V TPGR+ +L G++ RFL LDE D +L F +
Sbjct: 261 GTPVNQQIRELERGV-DILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQI 319
Query: 294 HRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVP 353
+I++ + VRQ ++ SAT P + R A + + + + +V
Sbjct: 320 RKIVQQM-----------DMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRV-- 366
Query: 354 LETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHA 413
+ Q VE + + K + + L + + + A
Sbjct: 367 -------------------GSSTDLIVQ-RVEFVHDSDKRSHLMDLLHAQRENGNQGKQA 406
Query: 414 LDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTN 473
L + F+ K + L G AT +HGD + R L+ FK G +LV
Sbjct: 407 L----TLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVAT 462
Query: 474 ELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKL 531
+++ARGLD+ VVN +LP D Y HR GRTGR G +G + + K L
Sbjct: 463 DVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATAFFNDNNTTMAKPL 520
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 200/462 (43%), Gaps = 56/462 (12%)
Query: 88 FGNNERKPVRVLDKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTIL 147
FG ++ + + + F L + + +++ G+ T VQ A +P IL
Sbjct: 296 FGFDKENVIEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQEATLPIIL 355
Query: 148 KDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRE 207
K DV+ ++ TG+GKT+A+LLP + + K P S + K+ I AL++ P+RE
Sbjct: 356 KGKDVLAKAKTGTGKTVAFLLPSIEVVV----KSPPTSPD----NKRPPILALVICPTRE 407
Query: 208 LGMQIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIA---ELSA 264
L Q E +L VQ ++GG +++ ++ N I+V TPGR+ E +
Sbjct: 408 LANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRLKDHIENTP 467
Query: 265 AGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMV 324
G + LVLDE D LL FR+++ RII V + RQ +
Sbjct: 468 GFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKE---------------RQTFLF 512
Query: 325 SATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAV 384
SATVP V + C L R ++ V E ++ +
Sbjct: 513 SATVPEEVRQI-----CLVALRRDHEFVNCVHEGTIE------------THQQVRQMHMI 555
Query: 385 ESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTAT 444
SL Y ++R +H + +D K VI F K V L +
Sbjct: 556 ASLDRHFSLLYTLLR-EH-------IMGNVDYK-VIVFCTTAMVTKLVADLLGELNLNVR 606
Query: 445 ELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRA 504
E+H + R+ +F+ + +LVT+++SARG+D + LV+ + LP D Y HR
Sbjct: 607 EIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRL 666
Query: 505 GRTGRLGRNGTVLTICEEPEVFVVKKLQKQLGI---PIPCCD 543
GRTGR G+ G + + E + + L K L I P+P D
Sbjct: 667 GRTGRKGKEGEGILLLAPWEEYFLSSL-KDLPITKSPLPSID 707
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 208/453 (45%), Gaps = 61/453 (13%)
Query: 100 DKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTG 159
+KQ+ + ++A+ F E + + + L G T VQ A + L D ++++ TG
Sbjct: 363 EKQEPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAKTG 422
Query: 160 SGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKI 219
+GK++A+LLP + + N SG+G K I LI+ P+REL QI E + +
Sbjct: 423 TGKSMAFLLPAIETVLKAMN-----SGKG--VHKVAPIFVLILCPTRELASQIAAEGKAL 475
Query: 220 LGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRI---AELSAAGKLHTHGCRFL 276
L + VQ L+GG ++ L+ I++ TPGR+ E + +
Sbjct: 476 LKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLF 535
Query: 277 VLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAA 336
++DE D LL F+ ++ +II+ + R+ RQ ++ SAT+P V R +
Sbjct: 536 IVDEADLLLDLGFKRDVEKIIDCLPRQ---------------RQSLLFSATIPKEVRRVS 580
Query: 337 RSWGCDPLLVRAN----KVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALK 392
+ L+++ + + L V + +K Q+ + + P
Sbjct: 581 Q------LVLKRDHSYIDTIGLGCVETHDKVK----------------QSCI--VAPHES 616
Query: 393 HYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFK-LEARGMTATELHGDLG 451
H++ V L L+ I+ + +I F + T + +++ L + E+H
Sbjct: 617 HFHLVPHL------LKEHINNMPDYKIIVFCS-TGMVTSLMYTLLREMKLNVREIHARKP 669
Query: 452 KLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLG 511
+L R+ +FK +LVT+++SARG++ + LV+ + +P+D Y HR GRTGR G
Sbjct: 670 QLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRLGRTGREG 729
Query: 512 RNGTVLTICEEPEVFVVKKLQKQLGIPIPCCDI 544
+ G L + E + + +L+ PIP D+
Sbjct: 730 KGGKGLLLIAPWERYFLDELKDLPLEPIPAPDL 762
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 188/442 (42%), Gaps = 46/442 (10%)
Query: 111 AESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPI 170
+ F + L L+ + + GF P+EVQ +P + DVI Q+ +G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 171 LSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQ 230
L I P +V AL++ +REL QI EF + V
Sbjct: 105 LQQIEPSPGQV----------------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELL-SFNF 289
GG N ++ LK P IVVGTPGR+ L+ L R +LDE D++L S +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 290 RENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRAN 349
R ++ I + P+ +Q++M SAT+ + + + D L +
Sbjct: 209 RRDVQEIFKMT---------PHD------KQVMMFSATLSKEIRPVCKKFMQDGLRTLSG 253
Query: 350 KVVPLETVSPAEP-----------IKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVV 398
V L V + L + +A + +L ++HY +
Sbjct: 254 DSVALWWVGFGSGYCVFPRFHRARMGLNVPSNIDPMEIYVDDEAKL-TLHGLVQHYIKLS 312
Query: 399 RLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTT 458
++ K L + ALD V+ F+ + ++ L + +H + + R T
Sbjct: 313 EME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTR 371
Query: 459 LKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLT 518
K FK G R+LV +L RG+D+ ++V+N ++P + Y HR GR GR G G +T
Sbjct: 372 YKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAIT 431
Query: 519 -ICEEPEVFVVKKLQKQLGIPI 539
+ + V+ ++Q++ + I
Sbjct: 432 FVASASDSEVLNQVQERFEVDI 453
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 188/421 (44%), Gaps = 59/421 (14%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
F + L + + +E+ GF T VQ A +P IL+ D++ ++ TG+GKT+A+LLP + A
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVG 233
+ K P S + + I L+V P+REL Q E +L VQ ++G
Sbjct: 142 V----IKAPPASRD----NRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIG 193
Query: 234 GANRTRQEEALKKNKPAIVVGTPGRIAEL---SAAGKLHTHGCRFLVLDEVDELLSFNFR 290
G ++ L+K+ I+V TPGR+ + ++ G + LVLDE D LL FR
Sbjct: 194 GTKLPTEQRRLQKSPCQILVATPGRLKDHIDNTSGFATRLMGVKVLVLDEADHLLDMGFR 253
Query: 291 ENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANK 350
+ RII V ++ RQ + SATV V + C L R ++
Sbjct: 254 REIERIIAAVPKQ---------------RQTFLFSATVSDEVRQI-----CHVALKRDHE 293
Query: 351 VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRC 410
V E + + SL Y +++ +H D +
Sbjct: 294 FVNCVQEGAGE------------THQKVSQMYMIASLDRHFSLLYGLLK-KHITDNV--- 337
Query: 411 IHALDAKYVIAFMNH---TKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEV 467
VI F T+ + D++ KL + E+H + R+ +F+ +
Sbjct: 338 -----GYKVIIFCTTAMVTRLVADLLGKL---SLNVREIHSRKPQSYRTRVSDEFRKSKS 389
Query: 468 RVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGT-VLTICEEPEVF 526
+LVT+++SARG+D + LVV + LP+D Y HR GRTGR G+ G VL + E F
Sbjct: 390 IILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYF 449
Query: 527 V 527
+
Sbjct: 450 L 450
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 197/435 (45%), Gaps = 76/435 (17%)
Query: 110 AAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLP 169
+A +F LGL ++ + G PT VQ+ VP IL DV+ + TGSGKT A+ LP
Sbjct: 56 SATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP 115
Query: 170 ILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQ 229
IL + G+ AL+V P+REL Q+ +F K LG
Sbjct: 116 ILHRLAE----------------DPYGVFALVVTPTRELAFQLAEQF-KALGSCLNLRCS 158
Query: 230 QLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTH--------GCRFLVLDEV 281
+VGG + Q +L ++P IV+ TPGRI L L + +FLVLDE
Sbjct: 159 VIVGGMDMLTQTMSL-VSRPHIVITTPGRIKVL-----LENNPDVPPVFSRTKFLVLDEA 212
Query: 282 DELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGC 341
D +L F++ + I + + P S RQ ++ SAT+ S ++A
Sbjct: 213 DRVLDVGFQDELRTIFQCL---------PKS------RQTLLFSATMT-SNLQAL----- 251
Query: 342 DPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQ 401
L +NK E + + TQ + A + Y + Q
Sbjct: 252 --LEHSSNKAYFYEAYEGLKTVDTL-------------TQQFIFEDKDAKELYLVHILSQ 296
Query: 402 HKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKK 461
+ +R A ++ ++L ++ +LE + L+ +L+ L K
Sbjct: 297 MEDKGIR------SAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLS---ALSK 347
Query: 462 FKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICE 521
FK+G+V +L+ ++++RGLD+ DLV+N ++P D Y HR GRT R GR G ++I
Sbjct: 348 FKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIIT 407
Query: 522 EPEVFVVKKLQKQLG 536
E +V ++ K+++++G
Sbjct: 408 ETDVKLIHKIEEEVG 422
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/431 (26%), Positives = 191/431 (44%), Gaps = 28/431 (6%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVP-TILKDHDVIIQSYTGSGKTLAYLLPIL 171
++S + L +L+ + F PT++Q A + DVI + TGSGKTLA+ LPIL
Sbjct: 191 AWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPIL 250
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLG----IQALIVAPSRELGMQIVREFEKILGMDNKKA 227
+ R KV + G+ +K ++ALI+ P+REL +Q+ E + K
Sbjct: 251 QRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKV 310
Query: 228 VQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLH---THGCRFLVLDEVDEL 284
V +VGG +QE LK+ KP IVV TPGR+ EL +AG+ H H F VLDE D +
Sbjct: 311 VP-IVGGMFSEKQERRLKE-KPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRM 368
Query: 285 LSF-NFRENMHRIIE--------HVGR-RSGAGADPNSNAERAVRQLIMVSATVPFSVVR 334
+ +FRE + I++ + G+ ++ D N + RQ + SAT+ S
Sbjct: 369 VERGHFRE-LQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDF 427
Query: 335 AARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHY 394
+ L R + + I++ + L P ++
Sbjct: 428 RKK-------LKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEES 480
Query: 395 YCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLA 454
+ + K L + I F L+ + L+ G+ L ++ + A
Sbjct: 481 FIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRA 540
Query: 455 RSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNG 514
R ++ +F+ E +L+ +L ARG+D+ +++ +LP + Y HR GRT R +G
Sbjct: 541 RLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADG 600
Query: 515 TVLTICEEPEV 525
+ + E E
Sbjct: 601 CSIALIEPNET 611
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 188/459 (40%), Gaps = 62/459 (13%)
Query: 111 AESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPI 170
+ F + L L+ + + GF P+EVQ +P + DVI Q+ +G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 171 LSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQ 230
L I P +V AL++ +REL QI EF + V
Sbjct: 105 LQQIEPSPGQV----------------SALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELL-SFNF 289
GG N ++ LK P IVVGTPGR+ L+ L R +LDE D++L S +
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDM 208
Query: 290 RENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRAN 349
R ++ I + P+ +Q++M SAT+ + + + D L
Sbjct: 209 RRDVQEIFK---------MTPHD------KQVMMFSATLSKEIRPVCKKFMQDFLENETV 253
Query: 350 KV-------------------VPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVE----- 385
V + L VS I + + +E
Sbjct: 254 SVRLFSFGVENSEWRLCSFGFIVLVWVSMFRAILMFHSKTHIFEEKRWTRISPMEIYVDD 313
Query: 386 ----SLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGM 441
+L ++HY + ++ K L + ALD V+ F+ + ++ L
Sbjct: 314 EAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 372
Query: 442 TATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYA 501
+ +H + + R T K FK G R+LV +L RG+D+ ++V+N ++P + Y
Sbjct: 373 PSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 432
Query: 502 HRAGRTGRLGRNGTVLT-ICEEPEVFVVKKLQKQLGIPI 539
HR GR GR G G +T + + V+ ++Q++ + I
Sbjct: 433 HRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDI 471
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 73/91 (80%)
Query: 436 LEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPT 495
+EARGM + EL+ DL KL RS+ LKKFKN +VRVLVTNEL GL+ AECDL+V+LELPT
Sbjct: 645 IEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPT 704
Query: 496 DSIHYAHRAGRTGRLGRNGTVLTICEEPEVF 526
D++HYAHRAGR R GR TV+T+CEE +V
Sbjct: 705 DAVHYAHRAGRMRRPGRKMTVVTVCEESQVL 735
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 178/402 (44%), Gaps = 60/402 (14%)
Query: 135 PTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKK 194
P +P L+ DVI S TGSGKT A++LP+L+ I L + EG
Sbjct: 225 PMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGP----- 279
Query: 195 LGIQALIVAPSRELGMQIVRE---FEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPA- 250
AL++ P+REL QI E F + LG KAV + G + +Q ALK ++
Sbjct: 280 ---YALVMVPTRELAHQIEEETVKFSRYLGF---KAVS-ITGWESIEKQ--ALKLSQGCE 330
Query: 251 IVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHV--GRRSGAGA 308
IV+ TPGR+ + + + C +LVLDE D ++ +F + +++ +
Sbjct: 331 IVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKE 390
Query: 309 DPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXX 368
D ++ R M SAT+ SV R AR + +P++ V+ E K
Sbjct: 391 DEELEEKKIYRTTYMFSATMLLSVERLARKFLRNPVV-----------VTIGETTKFI-- 437
Query: 369 XXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHAL-DAKYVIAFMNHTK 427
TQ + + + K L++ I L D K I F+N
Sbjct: 438 -----------TQQVI------------MTKESDKFSRLKKLIDDLGDDKTAIVFVNTRN 474
Query: 428 QLKDVVFKLEARGMT-ATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECD 486
++ +V LE G T LH + R +L++FK VLVT ++ RGLD+ +
Sbjct: 475 KVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLA 534
Query: 487 LVVNLELPTDSIHYAHRAGRTGRLGRNG--TVLTICEEPEVF 526
V+N ++P Y HR GRTGR G+ G T E+ +VF
Sbjct: 535 QVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVF 576
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 190/422 (45%), Gaps = 77/422 (18%)
Query: 112 ESFSEL----GLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
+SF+EL G ++ L GF PT +Q A+P +L + + TGSGKT A++
Sbjct: 137 KSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFI 196
Query: 168 LPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDN--- 224
P+L ++ K P GI+A+I++P+REL Q RE +K++ N
Sbjct: 197 CPML-----IKLKRPSTD----------GIRAVILSPARELAAQTAREGKKLIKGSNFHI 241
Query: 225 KKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDEL 284
+ + LV A+ K +++ TP R+ A K+ +LVLDE D+L
Sbjct: 242 RLMTKPLVKTAD-------FSKLWCDVLISTPMRLKRAIKAKKIDLSKVEYLVLDESDKL 294
Query: 285 LSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPL 344
F +++ + I+ V + A ++P+ +R L SAT+P SV ARS D +
Sbjct: 295 ----FEQSLLKQIDCVVK---ACSNPS-----IIRSLF--SATLPDSVEELARSIMHDAV 340
Query: 345 -LVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHK 403
++ K ETV KL ++ Q+ ESL P
Sbjct: 341 RVIIGRKNTASETVKQ----KLVFAGSEEGKLLALR-QSFAESLNPP------------- 382
Query: 404 VDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFK 463
V+ F+ ++ K++ +L+ + A +H DL R + +F+
Sbjct: 383 ---------------VLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFR 427
Query: 464 NGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEP 523
GE VL+ ++ ARG+D + V+N + P + Y HR GR+GR GR+G +T E
Sbjct: 428 AGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQ 487
Query: 524 EV 525
+V
Sbjct: 488 DV 489
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 123 LIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSAI--GPLRNK 180
L ++L+ G +Q++ +L D++ ++ TG GKTLA++LPIL ++ GP ++K
Sbjct: 107 LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSK 166
Query: 181 VPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVGGANRTRQ 240
G G L++ P+REL Q+ +F+ G + L GG + Q
Sbjct: 167 RKMGYGRSP--------SVLVLLPTRELAKQVAADFDAYGGSLGLSSCC-LYGGDSYPVQ 217
Query: 241 EEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHV 300
E LK+ IVVGTPGRI + L +F VLDE DE+L F E++ I+ V
Sbjct: 218 EGKLKRGVD-IVVGTPGRIKDHIERQNLDFSYLQFRVLDEADEMLRMGFVEDVELILGKV 276
Query: 301 GRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVVPL---ETV 357
+ Q ++ SAT+P V + + L R K + L + +
Sbjct: 277 EDSTKV-------------QTLLFSATLPSWVKNISNRF-----LKRDQKTIDLVGNDKM 318
Query: 358 SPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAK 417
+ ++ +AA+ L P + Y
Sbjct: 319 KASNSVRHIAIPC---------NKAAMARLIPDIISCYS------------------SGG 351
Query: 418 YVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSA 477
I F Q+ ++ L+ + LHG++ + R TL F+NG+ LV ++A
Sbjct: 352 QTIIFAETKVQVSELSGLLDG----SRALHGEIPQSQREVTLAGFRNGKFATLVATNVAA 407
Query: 478 RGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVKKLQKQLGI 537
RGLD+ + L++ E P + Y HR+GRTGR G G +T+ + + V +++K+ GI
Sbjct: 408 RGLDINDVQLIIQCEPPREVEAYIHRSGRTGRAGNTGVAVTLYDSRKS-SVSRIEKEAGI 466
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 165/391 (42%), Gaps = 65/391 (16%)
Query: 151 DVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGM 210
DVI Q+ +G GKT ++L L I P G+ + AL++ +REL
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQIEP-------SPGQ---------VSALVLCHTRELAY 45
Query: 211 QIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHT 270
QI EF + V GG N ++ LK P IVVGTPGR+ L+ L
Sbjct: 46 QICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSL 105
Query: 271 HGCRFLVLDEVDELL-SFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVP 329
R +LDE D++L S + R ++ I + P+ +Q++M SAT+
Sbjct: 106 KNVRHFILDECDKMLESLDMRRDVQEIFKMT---------PHD------KQVMMFSATLS 150
Query: 330 FSVVRAARSWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPP 389
+ + + DP+ + + L +L
Sbjct: 151 KEIRPVCKKFMQDPMEIYVDDEAKL-------------------------------TLHG 179
Query: 390 ALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGD 449
++HY + ++ K L + ALD V+ F+ + ++ L + +H
Sbjct: 180 LVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 238
Query: 450 LGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGR 509
+ + R T K FK G R+LV +L RG+D+ ++V+N ++P + Y HR GR GR
Sbjct: 239 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 298
Query: 510 LGRNGTVLT-ICEEPEVFVVKKLQKQLGIPI 539
G G +T + + V+ ++Q++ + I
Sbjct: 299 FGTKGLAITFVASASDSEVLNQVQERFEVDI 329
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 191/432 (44%), Gaps = 92/432 (21%)
Query: 110 AAESFSELGLPNVLIDRLENE-GFTVPTEVQSAAVPTILK--DHDVIIQSYTGSGKTLAY 166
+A F +L L L+ L E F P+++Q+ ++P I+ +I Q++ GSGKT +
Sbjct: 89 SASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCF 148
Query: 167 LLPILSAIGP-LRNKVPQGSGEGGDSGKKLGIQALIVAPSRELG---MQIVREFEKILGM 222
+L +LS + P LR QAL + P+REL M+++++ K G+
Sbjct: 149 VLGMLSRVDPTLREP-----------------QALCICPTRELANQNMEVLQKMGKFTGI 191
Query: 223 DNKKAVQQLVGGANRTRQEEALKKNKPA---IVVGTPGRIAELSAAGKLHTHGCRFLVLD 279
+ AV + TR A + P +V+GTPG + + A +L + + LV D
Sbjct: 192 TAELAV------PDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFD 245
Query: 280 EVDELLSFN-FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARS 338
E D +L+ + FR++ +I++ +GR +PN Q+++ SAT +V
Sbjct: 246 EADHMLATDGFRDDSLKIMKDIGR-----VNPNF-------QVLLFSATFNETVKDFVAR 293
Query: 339 WGCDP--LLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYC 396
DP L V+ + A++S +K Y
Sbjct: 294 TVKDPNQLFVKREDL-------------------------------ALDS----VKQYKV 318
Query: 397 VV-RLQHKVDTLRRCIHAL-DAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLA 454
V + Q+K++ ++ I L D I F+ + V L G T +HG+L +
Sbjct: 319 VCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESD 378
Query: 455 RSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPT-------DSIHYAHRAGRT 507
R +K+FK +VL+ ++ ARG D +LVVN LPT D Y HR GR
Sbjct: 379 RDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRA 438
Query: 508 GRLGRNGTVLTI 519
GR GR G V +
Sbjct: 439 GRFGRKGAVFNL 450
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 188/445 (42%), Gaps = 70/445 (15%)
Query: 112 ESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
++F L L + ++ GF T++Q+ A+P ++ DV+ + TGSGKTLA+L+P +
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQL 231
+ ++ G+G L++ P+REL +Q +++L + + V ++
Sbjct: 214 ELLYRVKFTPRNGTG------------VLVICPTRELAIQSYGVAKELLKY-HSQTVGKV 260
Query: 232 VGGANRTRQEEALKKNKPAIVVGTPGRIAE-LSAAGKLHTHGCRFLVLDEVDELLSFNFR 290
+GG R + E L K ++V TPGR+ + L +FLV+DE D +L NF
Sbjct: 261 IGGEKRKTEAEILAKG-VNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFE 319
Query: 291 ENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANK 350
E++ +I+ N RQ + SAT ++ K
Sbjct: 320 EDLKKIL---------------NLLPKTRQTSLFSAT-------------------QSAK 345
Query: 351 VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVV----RLQHKVDT 406
V L VS P+ + + E L+ YCVV RL +
Sbjct: 346 VEDLARVSLTSPVYIDV------------DEGRKEVTNEGLEQGYCVVPSAMRLLFLLTF 393
Query: 407 LRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGE 466
L+R K ++ F + K K E+ G + + R+ T +F E
Sbjct: 394 LKRF---QGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQFIKAE 450
Query: 467 VRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGR-LGRNGTVLTICEEPEV 525
+L+ ++ARGLD D +V + P + Y HR GRT R G G L + E+
Sbjct: 451 TGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVLTPQEL 510
Query: 526 FVVKKLQKQLGIPIPCCDITEGKLV 550
++ L K IP+ + E KL+
Sbjct: 511 KFIQYL-KAAKIPVEEHEFEEKKLL 534
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 183/442 (41%), Gaps = 98/442 (22%)
Query: 110 AAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLP 169
A +SF ELGL + LI L +G PT +Q +A+P IL+ DV+ ++ TGSGKTLAYLLP
Sbjct: 44 APKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLP 103
Query: 170 ILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGM--DNKKA 227
+L + S KKL A I+ PSREL Q+ E ++ + KA
Sbjct: 104 LLQKLF----------SADSVSKKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKA 153
Query: 228 VQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLH----THGCRFLVLDEVDE 283
V QL + + AL P I+V TP I + AAG L + LVLDE D
Sbjct: 154 V-QLTSSMSASDMRNAL-AGLPEILVSTPACIPKCFAAGVLEPTAVSESLSILVLDEADL 211
Query: 284 LLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDP 343
LLS+ + +N+ + + RR Q +++SAT V + +
Sbjct: 212 LLSYGYEDNLRSVTSIIPRRC---------------QCLLMSATTSSDVEKLKK------ 250
Query: 344 LLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHK 403
L+ N +V T + E++P ++ ++ Q K
Sbjct: 251 -LILHNPIVLTLT----------------------EDNDKEEAVPSNVQQFWISCSAQDK 287
Query: 404 VDTLRRCIHA-LDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKF 462
+ + + + K ++ F+N + LE G+ + L+G+L + +R L++F
Sbjct: 288 LLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELPQNSRLHILEQF 347
Query: 463 KNGEVRVLVTNELSA-----------------------------------RGLDVAECDL 487
G L+ + ++ RG+D +
Sbjct: 348 NAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGVVRGIDFKKVHT 407
Query: 488 VVNLELPTDSIHYAHRAGRTGR 509
V+N ++P Y HR GRTGR
Sbjct: 408 VINFDMPQSVTGYIHRIGRTGR 429
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 191/440 (43%), Gaps = 65/440 (14%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
+F L L ++ GF T++Q+ ++ +L+ DV+ + TGSGKTLA+L+P +
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 173 AIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLV 232
+ R G+G +++ P+REL +Q E++L + + V ++
Sbjct: 150 LLFKERFSPRNGTG------------VIVICPTRELAIQTKNVAEELL-KHHSQTVSMVI 196
Query: 233 GGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGK--LHTHGCRFLVLDEVDELLSFNFR 290
GG NR R E + +V+ TPGR+ + K ++ H + LV+DE D +L NF
Sbjct: 197 GGNNR-RSEAQRIASGSNLVIATPGRLLDHLQNTKAFIYKH-LKCLVIDEADRILEENFE 254
Query: 291 ENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANK 350
E+M++I++ + + RQ + SAT + +K
Sbjct: 255 EDMNKILKILPK---------------TRQTALFSAT-------------------QTSK 280
Query: 351 VVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRC 410
V L VS P+ + L+ YCVV + ++ L
Sbjct: 281 VKDLARVSLTSPVHVDVDDGRRKVTN------------EGLEQGYCVVPSKQRLILLISF 328
Query: 411 IHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVL 470
+ K ++ F + K ++ ++ + +++HG + + R+ T F + +L
Sbjct: 329 LKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGIL 388
Query: 471 VTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGR-LGRNGTVLTICEEPEVFVVK 529
+ +++ARGLD+ D ++ + P Y HR GRT R G G L + E+ ++
Sbjct: 389 LCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIR 448
Query: 530 KLQKQLGIPIPCCDITEGKL 549
L K +P+ + E +L
Sbjct: 449 YL-KAAKVPVKELEFNEKRL 467
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 160/380 (42%), Gaps = 73/380 (19%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P + F + P+ +++ + GFT PT +Q+ P LK D+I + TGSGKTLAYL
Sbjct: 161 PKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 220
Query: 168 LPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKA 227
LP L + + P+ G+ G LI+AP+REL +QI E K G+ +
Sbjct: 221 LPALVHV----SAQPR-------LGQDDGPIVLILAPTRELAVQIQEESRK-FGLRSGVR 268
Query: 228 VQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEVDELLSF 287
+ GGA + Q L++ IV+ TPGR+ ++ + +LVLDE D +L
Sbjct: 269 STCIYGGAPKGPQIRDLRRGV-EIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDM 327
Query: 288 NFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLL-- 345
F + +I+ + R RQ ++ SAT P V AR + DP
Sbjct: 328 GFEPQIRKIVSQI---------------RPDRQTLLWSATWPREVETLARQFLRDPYKAI 372
Query: 346 -----VRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRL 400
++AN+ + +E +P K+ + L
Sbjct: 373 IGSTDLKANQSI----------------------------NQVIEIVPTPEKYNRLLTLL 404
Query: 401 QHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGDLGKLARSTTLK 460
+ +D ++ F+ + V +L G A +HGD + R L
Sbjct: 405 K----------QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLA 454
Query: 461 KFKNGEVRVLVTNELSARGL 480
+FK+G ++ +++ARGL
Sbjct: 455 EFKSGRSPIMTATDVAARGL 474
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 180/418 (43%), Gaps = 64/418 (15%)
Query: 114 FSELGLP--NVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
FS+L P +I+ L F T VQ+A +P + DV + + TGSGKTLA+++P++
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILG-MDNKKAVQQ 230
+ + P K + +I++P+REL QI + + + N +V
Sbjct: 76 EILRRSTSFPP----------KPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSV-L 124
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGK-LHTHGCRFLVLDEVDELLSFNF 289
LVGG + +++ +++GTPGR++++ + L L+LDE D LL F
Sbjct: 125 LVGGREVKADMKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGF 184
Query: 290 RENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRAN 349
+ ++ II + ++ G + SAT V A++ +P+ V
Sbjct: 185 QRQVNYIISRLPKQRRTG---------------LFSATQTEGVEELAKAGLRNPVRVEVR 229
Query: 350 KVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPA---LKHYYCVV--RLQHKV 404
E+ +Q S P+ L++ C + V
Sbjct: 230 AKSKSES-----------------------SQQLTNSKTPSGLHLEYMECEADKKSSQLV 266
Query: 405 DTLRRCIHALDAKYVIAFMN--HTKQLKDVVFKLEA-RGMTATELHGDLGKLARSTTLKK 461
D L I D K ++ FM V+ K+ A + ++ +HGD+ + AR L
Sbjct: 267 DLL---IKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQNARDKALAS 323
Query: 462 FKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTI 519
F L+ +++ARGLD+ D VV + P D + HRAGRT RLGR G +
Sbjct: 324 FTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGRQGRAIVF 381
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 188/435 (43%), Gaps = 62/435 (14%)
Query: 93 RKPVRVLDKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDV 152
R+ + + + Q + P +F+ GLP L+ LE G+ PT +Q A+P L +
Sbjct: 91 RRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSL 150
Query: 153 IIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI 212
+ + TGSGKT ++L+PI+S ++ P S ++ A+++AP+REL +Q
Sbjct: 151 LASADTGSGKTASFLVPIISRCTTYHSEHP--------SDQRRNPLAMVLAPTRELCVQ- 201
Query: 213 VREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHG 272
V + K+LG +VGG + Q +++ +++GTPGR+ +L + +
Sbjct: 202 VEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGV-ELIIGTPGRVVDLLSKHTIELDN 260
Query: 273 CRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSV 332
VLDEVD +L FR+ + +I + + + Q+++ SAT+ V
Sbjct: 261 IMTFVLDEVDCMLQRGFRDQVMQIFQALSQ----------------PQVLLFSATISREV 304
Query: 333 VRAARSWGCDPLLVR-ANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPAL 391
+ S + +LV N P + V+ I + +++Q + PPA
Sbjct: 305 EKVGGSLAKEIILVSIGNPNKPNKAVNQLA-IWVDAKQKKQKLFDILRSQNHFK--PPA- 360
Query: 392 KHYYCVVRLQHKV--DTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGD 449
VV + +V D L I + G+ A +HG+
Sbjct: 361 -----VVYVSSRVGADLLANAITVV------------------------TGVKALSIHGE 391
Query: 450 LGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGR 509
R + F GEV VLV+ + RG+D+ V+ ++P+ Y H GR R
Sbjct: 392 KPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASR 451
Query: 510 LGRNGTVLTICEEPE 524
+G GT + E +
Sbjct: 452 MGEKGTAIVFVNEDD 466
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 188/435 (43%), Gaps = 62/435 (14%)
Query: 93 RKPVRVLDKQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDV 152
R+ + + + Q + P +F+ GLP L+ LE G+ PT +Q A+P L +
Sbjct: 91 RRKLDIHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSL 150
Query: 153 IIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI 212
+ + TGSGKT ++L+PI+S ++ P S ++ A+++AP+REL +Q
Sbjct: 151 LASADTGSGKTASFLVPIISRCTTYHSEHP--------SDQRRNPLAMVLAPTRELCVQ- 201
Query: 213 VREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHG 272
V + K+LG +VGG + Q +++ +++GTPGR+ +L + +
Sbjct: 202 VEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGV-ELIIGTPGRVVDLLSKHTIELDN 260
Query: 273 CRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSV 332
VLDEVD +L FR+ + +I + + + Q+++ SAT+ V
Sbjct: 261 IMTFVLDEVDCMLQRGFRDQVMQIFQALSQ----------------PQVLLFSATISREV 304
Query: 333 VRAARSWGCDPLLVR-ANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPAL 391
+ S + +LV N P + V+ I + +++Q + PPA
Sbjct: 305 EKVGGSLAKEIILVSIGNPNKPNKAVNQLA-IWVDAKQKKQKLFDILRSQNHFK--PPA- 360
Query: 392 KHYYCVVRLQHKV--DTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARGMTATELHGD 449
VV + +V D L I + G+ A +HG+
Sbjct: 361 -----VVYVSSRVGADLLANAITVV------------------------TGVKALSIHGE 391
Query: 450 LGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGR 509
R + F GEV VLV+ + RG+D+ V+ ++P+ Y H GR R
Sbjct: 392 KPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASR 451
Query: 510 LGRNGTVLTICEEPE 524
+G GT + E +
Sbjct: 452 MGEKGTAIVFVNEDD 466
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 184/440 (41%), Gaps = 66/440 (15%)
Query: 114 FSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILSA 173
F++L + + L++ + T+VQSAA+P L D++ + TGSGKTLA+++PIL
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 174 IGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQQLVG 233
+ R G G +I++P+REL Q K+ G +K + L+G
Sbjct: 133 LHRERWSPEDGVG------------CIIISPTRELAAQTFGVLNKV-GKFHKFSAGLLIG 179
Query: 234 GANRTRQEEALKKNKPAIVVGTPGRIAE-LSAAGKLHTHGCRFLVLDEVDELLSFNFREN 292
G E+ + ++ I+V PGR+ + + + L+LDE D +L F+
Sbjct: 180 GREGVDVEKE-RVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQ 238
Query: 293 MHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAARSWGCDPLLVRANKVV 352
+ II + + RQ ++ SAT V AR DP + +
Sbjct: 239 LDPIISQLPKH---------------RQTLLFSATQTKKVKDLARLSLRDPEYISVH--- 280
Query: 353 PLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCVVRLQHKVDTLRRCIH 412
AE AV + P +L +V ++ K+D L I
Sbjct: 281 -------AE---------------------AVTATPTSLMQTVMIVPVEKKLDMLWSFIK 312
Query: 413 ALDAKYVIAFMNHTKQLKDV--VFKLEARGMTATELHGDLGKLARSTTLKKFKNGEVRVL 470
++ F++ KQ+K V F G+ LHG + + R +F + VL
Sbjct: 313 THLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQ-SVL 371
Query: 471 VTNELSARGLDVAEC-DLVVNLELPTDSIHYAHRAGRTGRLGRNGTVLTICEEPEVFVVK 529
++ ARGLD + D VV ++ P D Y HR GRT R G L E +++
Sbjct: 372 FCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIE 431
Query: 530 KLQKQLGIPIPCCDITEGKL 549
KLQ + +PI KL
Sbjct: 432 KLQ-EAKVPIKLIKANNQKL 450
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 106 SAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLA 165
+ P + +P ++ R+E GF PT++Q A+PT+ D I+ + TGSGKTL
Sbjct: 70 TVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLT 129
Query: 166 YLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILG---M 222
YLL I S I P R+ V QA+IV P+RELGMQ+ + + +
Sbjct: 130 YLLLIFSLINPQRSSV----------------QAVIVVPTRELGMQVTKVARMLAAKSEI 173
Query: 223 DNKKA-VQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVLDEV 281
D K V L+ G R + LK PAI+V T + + R LV+DEV
Sbjct: 174 DVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHMLEKHIFRIDSVRVLVVDEV 233
Query: 282 DELL 285
D L
Sbjct: 234 DFLF 237
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 446 LHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAG 505
L GD+ +R+ +L + + G +LV+ +++ARG+D+ E + N +LP Y HRAG
Sbjct: 371 LEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAG 430
Query: 506 RTGR---LGRNGTVLTICEEPEVFVVKKLQKQL 535
R GR R V + E FV+++ + +L
Sbjct: 431 RAGRKPFSDRKCIVANLITSEERFVLQRYENEL 463
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 192/452 (42%), Gaps = 67/452 (14%)
Query: 127 LENEGFTVPTEVQSAAVPTILK----DHDVIIQSYTGSGKTLAYLLPILSAIG--PLRNK 180
LEN G + VQ A + + D+ + S TGSGKTL+Y LPI+ + P+R
Sbjct: 46 LENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVR-- 103
Query: 181 VPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKI---LGMDNKKAV-QQLVGG-- 234
++AL+V P+R+L +Q+ F+ I +G+ AV Q + G
Sbjct: 104 ---------------CLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEI 148
Query: 235 ----------ANRTRQEEALKKNKPA---IVVGTPGRIAE-LSAAGKLHTHGCRFLVLDE 280
A + L +N + I+V TPGR+ + ++ R+LV+DE
Sbjct: 149 SQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDE 208
Query: 281 VDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVR---AAR 337
D LL ++ + +++ + + S P+ + SA VR R
Sbjct: 209 TDRLLREAYQSWLPTVLQ-LTQTSDDSLFPSFTP-------FVPSAFGSLQTVRRQSVER 260
Query: 338 SWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCV 397
+ P R K+V T++ +P KL M T + LP L+ +
Sbjct: 261 GFKGKPY-PRLVKMVLSATLT-QDPSKLIQLDLHHPLF--MTTGGSRYRLPEKLECLRLI 316
Query: 398 VRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARG---MTATELHGDLGKLA 454
K L + + + + I F + + + + L G + A E G L +
Sbjct: 317 CETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSL 376
Query: 455 RSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRNG 514
RS LK F+ G+++VLV ++ RG+DV V+N ++P + + HRAGRT R G+ G
Sbjct: 377 RSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAG 436
Query: 515 TVLTICEEPEVFVVKKLQKQLG------IPIP 540
T+ EV KL +++G PIP
Sbjct: 437 RCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIP 468
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 122/236 (51%), Gaps = 37/236 (15%)
Query: 108 PFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYL 167
P + + + GL + ++D L+ + P +Q+ A+P I+ D I + TGSGKTL ++
Sbjct: 392 PRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFV 451
Query: 168 LPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQI---VREFEKILGMDN 224
LP+L I +++ P +G+G +G L++AP+REL QI +R+F K LG+
Sbjct: 452 LPMLRHI---KDQPPVEAGDG-----PIG---LVMAPTRELVQQIYSDIRKFSKALGI-- 498
Query: 225 KKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAEL--SAAGKL-HTHGCRFLVLDEV 281
+ GG+ +Q LK+ IVV TPGR+ ++ +++GK+ + +LV+DE
Sbjct: 499 --ICVPVYGGSGVAQQISELKRG-TEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEA 555
Query: 282 DELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAAR 337
D + F + RI++++ R RQ ++ SAT P V AR
Sbjct: 556 DRMFDMGFEPQITRIVQNI---------------RPDRQTVLFSATFPRQVETLAR 596
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 454 ARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTGRLGRN 513
++ ++ FK+ +L+ ++ARGLDV E +LVVN + P Y HR GRTGR GR
Sbjct: 652 SQEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRK 711
Query: 514 GTVLTICEEPEVFVVKKLQKQLGI---PIP 540
G +T E + L K L + P+P
Sbjct: 712 GCAVTFISEDDAKYAPDLVKALELSEQPVP 741
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 163/384 (42%), Gaps = 58/384 (15%)
Query: 142 AVPTILKDHDVIIQSYTGSGKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALI 201
A+P L ++ + TGSGKT ++L+PI+S ++ P S ++ A++
Sbjct: 3 AIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHP--------SDQRRNPLAMV 54
Query: 202 VAPSRELGMQIVREFEKILGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAE 261
+AP+REL +Q V + K+LG +VGG + Q +++ +++GTPGR+ +
Sbjct: 55 LAPTRELCVQ-VEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGV-ELIIGTPGRVVD 112
Query: 262 LSAAGKLHTHGCRFLVLDEVDELLSFNFRENMHRIIEHVGRRSGAGADPNSNAERAVRQL 321
L + + VLDEVD +L FR+ + +I + A + P Q+
Sbjct: 113 LLSKHTIELDNIMTFVLDEVDCMLQRGFRDQVMQIFQ-------ALSQP---------QV 156
Query: 322 IMVSATVPFSVVRAARSWGCDPLLVR-ANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQT 380
++ SAT+ V + S + +LV N P + V+ I + +++
Sbjct: 157 LLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLA-IWVDAKQKKQKLFDILRS 215
Query: 381 QAAVESLPPALKHYYCVVRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDVVFKLEARG 440
Q + PPA+ + V D L I + G
Sbjct: 216 QNHFK--PPAVVYVSSRV----GADLLANAITVVT------------------------G 245
Query: 441 MTATELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHY 500
+ A +HG+ R + F GEV VLV+ + RG+D+ V+ ++P+ Y
Sbjct: 246 VKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEY 305
Query: 501 AHRAGRTGRLGRNGTVLTICEEPE 524
H GR R+G GT + E +
Sbjct: 306 IHVIGRASRMGEKGTAIVFVNEDD 329
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 102/198 (51%), Gaps = 17/198 (8%)
Query: 114 FSELGLP--NVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPIL 171
FSEL P +I+ L+ GF V T VQ+ +P + DV++ + TGSGKTLA+LLP +
Sbjct: 16 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 75
Query: 172 SAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILG-MDNKKAVQQ 230
I + P K + +I++P+REL QI + E + + N +V
Sbjct: 76 EIIRRSNSYPP----------KPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSV-L 124
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGK-LHTHGCRFLVLDEVDELLSFNF 289
LVGG L++ +++GTPGR++++ + L L+LDE D LL F
Sbjct: 125 LVGGREVEADMNTLEEEGANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGF 184
Query: 290 RENMHRIIEHV--GRRSG 305
++ ++ II + RR+G
Sbjct: 185 QKQVNYIISRLPKQRRTG 202
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 447 HGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGR 506
HG + + R T L F VL+ +++ARGLD+ D VV + P D + HR GR
Sbjct: 300 HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGR 359
Query: 507 TGRLGRNGTVLTI 519
T R+ R G +
Sbjct: 360 TARMERQGRAIVF 372
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/424 (24%), Positives = 171/424 (40%), Gaps = 58/424 (13%)
Query: 101 KQQIESAPFAAESFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGS 160
K E+ F+ ++F+E+G ++ L+ + F P +Q+ A ++ II +GS
Sbjct: 363 KDTRETGFFSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGS 422
Query: 161 GKTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKI- 219
GKTLAYL+P+ I LR + QG + ++ +++ P+ EL Q++ I
Sbjct: 423 GKTLAYLVPV---IQRLREEELQGHSKSSPGCPRV----IVLVPTAELASQVLANCRSIS 475
Query: 220 -LGMDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGKLHTHGCRFLVL 278
G+ + V + GG + Q E L++ +++ TPGR L G L R +L
Sbjct: 476 KSGVPFRSMV--VTGGFRQRTQLENLEQGVD-VLIATPGRFTYLMNEGILGLSNLRCAIL 532
Query: 279 DEVDELLSFN-FRENMHRIIEHVGRRSGAGADPNSNAERAVRQLIMVSATVPFSVVRAAR 337
DEVD L + F + +I N+ Q + V+AT+P +
Sbjct: 533 DEVDILFGDDEFEAALQNLI---------------NSSPVTAQYLFVTATLPLEIYNKLV 577
Query: 338 SWGCDPLLVRANKVVPLETVSPAEPIKLXXXXXXXXXXXXMQTQAAVESLPPALKHYYCV 397
D +V +V VS A L +T
Sbjct: 578 EVFPDCEVVMGPRV---HRVSNALEEFLVDCSGDDNAEKTPETA---------------- 618
Query: 398 VRLQHKVDTLRRCIHALDAKYVIAFMNHTKQLKDV--VFK---LEARGMTATELHGDLGK 452
Q+K L + + I F N + + V +FK + R + H L +
Sbjct: 619 --FQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQ 676
Query: 453 LARSTTLKKFKNGEVR----VLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAGRTG 508
+R T +++F + + LV + ++RG+D + D VV + P D Y R GRT
Sbjct: 677 ESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTA 736
Query: 509 RLGR 512
R R
Sbjct: 737 RGAR 740
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 26/207 (12%)
Query: 104 IESAPFAAESFSELGLP--NVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSG 161
IE AP FSEL P +I+ L+ GF V T VQ+ +P + DV++ + TGSG
Sbjct: 10 IEEAP---PRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSG 66
Query: 162 KTLAYLLPILSAIGPLRNKVPQGSGEGGDSGKKLGIQALIVAPSRELGMQIVREFEKILG 221
KTLA+LLP + I + P K + +I++P+REL QI + + +
Sbjct: 67 KTLAFLLPFIEIIRRSNSYPP----------KPHQVMGVIISPTRELSAQI-HKVARAVR 115
Query: 222 MDNKKAVQQLVGGANRTRQEEALKKNKPAIVVGTPGRIAELSAAGK-LHTHGCRFLVLDE 280
+D K + V T +EE +++GTPGR++++ + L L+LDE
Sbjct: 116 LDFAKCRE--VEADMNTLEEEGAN-----LLIGTPGRLSDMMKRMEFLDFRNLEILILDE 168
Query: 281 VDELLSFNFRENMHRIIEHV--GRRSG 305
D LL F++ ++ II + RR+G
Sbjct: 169 ADRLLDMGFQKQVNYIISRLPKQRRTG 195
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 88/191 (46%), Gaps = 15/191 (7%)
Query: 113 SFSELGLPNVLIDRLENEGFTVPTEVQSAAVPTILKDHDVIIQSYTGSGKTLAYLLPILS 172
S+ LGL + + L + GF P+ Q+ +P+IL DVI+ + TGSGKT YL PI
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPI-- 138
Query: 173 AIGPLRNKVPQGSGEGGDSGK-KLGIQALIVAPSRELGMQIVREFEKILGMDNKKAVQ-Q 230
I L N + L +LI+ P+ L Q+VR ++ D ++ +
Sbjct: 139 -IDQLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVE 197
Query: 231 LVGGANRTRQEEALKKNKPAIVVGTPGRI---AELSAAGKLHTHGC-RFLVLDEVDELLS 286
V G+ + P I+V TP + E +L C +++V DE D LL
Sbjct: 198 AVCGS------QGWPDRLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLC 251
Query: 287 FNFRENMHRII 297
+F+ + R+I
Sbjct: 252 GSFQNQIIRLI 262
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 6/156 (3%)
Query: 389 PALKHYYCVVRLQHKVDTLRRCIHALDA---KYVIAFMNHTKQLKDVVFKLEARGMTATE 445
P LK + V + +VD L + + + + F N + ++ V LE +
Sbjct: 394 PRLKQKWVEVTVDSQVDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYR 453
Query: 446 LHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAG 505
H + R+ L F+ V V + +ARG+DV V+ + + ++ + HR G
Sbjct: 454 YHKNHKLDERANILADFRETG-GVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIG 512
Query: 506 RTGRLGRNGTVLTICEEPEVFVVKKLQK--QLGIPI 539
RT R G+ GTV ++ E +V+ +++ ++G P+
Sbjct: 513 RTARAGQYGTVTSLYTEANRDLVEAIREAVKMGQPV 548
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 446 LHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLELPTDSIHYAHRAG 505
L GD+ +R+ +L + + G +LV+ +++ARG+D+ E + N +LP Y HRAG
Sbjct: 214 LEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAG 273
Query: 506 RTGR---LGRNGTVLTICEEPEVFVVKKLQKQL 535
R GR R V + E FV+++ + +L
Sbjct: 274 RAGRKPFSDRKCIVANLITSEERFVLQRYENEL 306