Miyakogusa Predicted Gene
- Lj3g3v0937880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0937880.1 Non Chatacterized Hit- tr|I1KTU7|I1KTU7_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.32,0,MITOCHONDRIAL
DEAD BOX PROTEIN, PUTATIVE,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
DEAD,DNA/RNA helicas,CUFF.41681.1
(540 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 540 e-154
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 120 3e-27
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 105 6e-23
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 96 7e-20
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 93 4e-19
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 93 5e-19
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 92 6e-19
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 92 7e-19
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 92 9e-19
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 92 1e-18
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 92 1e-18
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 88 2e-17
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 84 2e-16
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 84 2e-16
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 84 3e-16
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 83 4e-16
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 82 8e-16
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 82 8e-16
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 82 9e-16
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 82 1e-15
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 81 2e-15
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 81 2e-15
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 81 2e-15
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 81 2e-15
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 80 3e-15
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 80 5e-15
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 79 1e-14
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 78 1e-14
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 78 2e-14
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 77 2e-14
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 77 2e-14
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 77 2e-14
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 77 2e-14
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 77 2e-14
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 77 2e-14
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 77 3e-14
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 75 9e-14
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 75 1e-13
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 75 1e-13
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 75 1e-13
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 75 2e-13
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 74 2e-13
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 74 2e-13
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 73 6e-13
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 73 6e-13
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 72 9e-13
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 72 1e-12
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 71 2e-12
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 71 2e-12
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 70 3e-12
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 70 3e-12
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 70 3e-12
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 70 3e-12
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 70 5e-12
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 69 7e-12
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 69 7e-12
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 69 7e-12
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 69 9e-12
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 69 1e-11
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 68 2e-11
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 68 2e-11
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 68 2e-11
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 67 2e-11
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 67 2e-11
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 67 2e-11
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 67 3e-11
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 67 4e-11
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 67 5e-11
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 67 5e-11
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 66 8e-11
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 65 9e-11
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 62 1e-09
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 62 1e-09
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 62 1e-09
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 61 2e-09
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 60 5e-09
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 59 7e-09
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 57 4e-08
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 53 4e-07
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 52 8e-07
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 540 bits (1392), Expect = e-154, Method: Compositional matrix adjust.
Identities = 287/548 (52%), Positives = 365/548 (66%), Gaps = 32/548 (5%)
Query: 6 ATSRFAW------FHSSVHCRSQVEPHHGSLTLSSIGLHSETAAASNKPNKPLGSTSESL 59
A + +W FH V GSLTL+S+ L NKP K +++
Sbjct: 18 AFRKISWTCAATNFHRQSRFLCHVAKEDGSLTLASLDL-------GNKPRK--FGKGKAM 68
Query: 60 KNKGKPFGSNEREPVRVIE----------KQQQIEPAPFAAKSFSELGLPNVLVERLKNE 109
K +G + VR ++ K +I F+AKSF ELGLP+ L++ L+ E
Sbjct: 69 KLEGSFVTEMGQGKVRAVKNDKMKVVKEKKPAEIVSPLFSAKSFEELGLPDSLLDSLERE 128
Query: 110 GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGE 169
GF+VPT+VQ AAVP I+K HD +I+S+ GSGKTLAYLLPILS IGPL K E
Sbjct: 129 GFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEK---SRSSHSE 185
Query: 170 PAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPA 229
K+ I+A+IVAPSRE+GMQIV E+EK+LG ++R+VQQLVGG NR RQEEAL+KNKPA
Sbjct: 186 NDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALKKNKPA 245
Query: 230 IVVGTPSRIAELSAARKLRTLGCRFXXXXXXXXXXXXXXRKDMHRMLEHVGRRSDAGADP 289
IVVGTP RIAE+S KL T GCRF R+D+HR+LEHVG+RS AG
Sbjct: 246 IVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRSGAGPKG 305
Query: 290 NSNAERAEHQLIMXXXXXXXXXXXXXXXWGCDPLLVRDNKVVPLETVTPAEPVKLXXXXX 349
+ ERA Q I+ W +P+LV+ NKV PL+TV P+ PV
Sbjct: 306 EVD-ERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAPV---MSLT 361
Query: 350 XXXXXXXXXXXXXVESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLK 409
++SLPPALKHYYC+ + QHKVDTLRRC++AL A+ VIAFMNH++QLK
Sbjct: 362 PTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFMNHSRQLK 421
Query: 410 DVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVN 469
DVV KLEARGM +AE+HGDLG+L RST+LKKFKNG+++VLVT ELSARGLDVA+CDLVVN
Sbjct: 422 DVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVAECDLVVN 481
Query: 470 LELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKLV 529
LELPTD++HYAHRAGR GRLGR GTV+T+C++ +VF++KK++KQLG+P C+ + +LV
Sbjct: 482 LELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFLYCEFVDGELV 541
Query: 530 VTAEDKAL 537
VT EDKA+
Sbjct: 542 VTEEDKAI 549
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/91 (62%), Positives = 75/91 (82%)
Query: 415 LEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPT 474
+EARGM +AEL+ DL +L RS++LKKFKN DVRVLVT EL GL+ A+CDL+V+LELPT
Sbjct: 645 IEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMVDLELPT 704
Query: 475 DSIHYAHRAGRIGRLGRNGTVLTICKDPEVF 505
D++HYAHRAGR+ R GR TV+T+C++ +V
Sbjct: 705 DAVHYAHRAGRMRRPGRKMTVVTVCEESQVL 735
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 185/438 (42%), Gaps = 85/438 (19%)
Query: 93 FSELGL-PNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
F L L PNV +K +G+ VPT +Q +P IL DV+ + GSGKT A+L+P+L
Sbjct: 30 FESLNLGPNVF-NAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLE 88
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
L+ PQG G+ ALI++P+R++ Q ++ K LG V LV
Sbjct: 89 K---LKQHVPQG-----------GVRALILSPTRDLAEQ-TLKFTKELGKFTDLRVSLLV 133
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTL-GCRFXXXXXXXXXXXXXXRK 270
GG + Q E L K P +++ TP R+ L + TL + +
Sbjct: 134 GGDSMEDQFEELTKG-PDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAE 192
Query: 271 DMHRMLEHVGRRSD----AGADPNSNAERAEHQLIMXXXXXXXXXXXXXXXWGCDPLLVR 326
+H++L + + P++ AE A+ L +P LVR
Sbjct: 193 QLHQILTQLSENRQTLLFSATLPSALAEFAKAGL-------------------REPQLVR 233
Query: 327 ---DNKVVPLETVTPAEPVKLXXXXXXXXXXXXXXXXXXVESLPPALKHYYCVVRLQHKV 383
+NK+ P +KL ++ P K+ + ++ +
Sbjct: 234 LDVENKISP--------DLKLSFL-----------------TVRPEEKYSALLYLVREHI 268
Query: 384 DTLRRCIYALHAKYVIAFMNHTKQLKDV---VCKLEARGMKAAELHGDLGELARSTILKK 440
+ ++ + + K+ + F+N +L+++ VC +GD+ + AR + +
Sbjct: 269 SSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVC------------YGDMDQDARKIHVSR 316
Query: 441 FKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICK 500
F+ +L+ T+++ARG+D+ D V+N + P + HR GR R GR G +
Sbjct: 317 FRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVT 376
Query: 501 DPEVFVLKKLQKQLGIPI 518
++ + L L P+
Sbjct: 377 PEDMPYMLDLHLFLSKPV 394
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVV-RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K ++ V + + K DTL L + F N +++ + K+ + + +HG
Sbjct: 247 GIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHG 306
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+ +F++GD RVL+TT++ ARG+DV + LV+N +LP + Y HR GR G
Sbjct: 307 DMPQKERDAIMNEFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG 366
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + K ++ +L+ +++ I
Sbjct: 367 RFGRKGVAINFVKSDDIKILRDIEQYYSTQI 397
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 76 VIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKS 135
V E IEP SF+++G+ ++ + GF P+ +Q AV IL+ DVI ++
Sbjct: 24 VFETTDGIEPIT----SFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQA 79
Query: 136 WKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMEL 195
G+GKT L + + D E ++ALI++P+RE+ Q +
Sbjct: 80 QSGTGKTSMIALSVCQVV----------DTSSRE------VQALILSPTRELATQTEKTI 123
Query: 196 EKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRT 249
+ I N + GGN ++ ++ +V GTP R+ ++ R LRT
Sbjct: 124 QAIGLHAN--IQAHACIGGNSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRT 175
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 246 GIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 305
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 306 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 365
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + + +L +QK + +
Sbjct: 366 RFGRKGVAINFVTRDDERMLFDIQKFYNVVV 396
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
+SF +GL L+ GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ + +AL++AP+RE+ QI EK++ + D V
Sbjct: 94 QQL----------------DFSLIQCQALVLAPTRELAQQI----EKVMRALGDYLGVKV 133
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + + +VVGTP R+ ++ + LR
Sbjct: 134 HACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 173
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 251 GIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L +QK
Sbjct: 371 RFGRKGVAINFVTRDDERMLFDIQK 395
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
+SF +GL L+ + GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ + +AL++AP+RE+ QI EK++ + D V
Sbjct: 99 QQL----------------DFSLIQCQALVLAPTRELAQQI----EKVMRALGDYLGVKV 138
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + + +VVGTP R+ ++ + LR
Sbjct: 139 HACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 83/151 (54%), Gaps = 1/151 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 241 GIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 300
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 301 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 360
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + + +L +QK + +
Sbjct: 361 RFGRKGVAINFVTRDDERMLFDIQKFYNVVV 391
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
+SF +GL L+ + GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 29 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 88
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ + +AL++AP+RE+ QI EK++ + D V
Sbjct: 89 QQL----------------DFSLIQCQALVLAPTRELAQQI----EKVMRALGDYLGVKV 128
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + + +VVGTP R+ ++ + LR
Sbjct: 129 HACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 168
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 253 GIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 312
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 313 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 372
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + ++ +Q+
Sbjct: 373 RFGRKGVAINFMTSEDERMMADIQR 397
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF + L L+ + GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 42 SFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQ 101
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQQ 209
+ + +AL++AP+RE+ QI EK++ + D V Q
Sbjct: 102 QL----------------DISLVQCQALVLAPTRELAQQI----EKVMRALGDYLGVKAQ 141
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + ++ +VVGTP R+ +L + LR
Sbjct: 142 ACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 369 ALKHYYCVVRLQH-KVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 246 GIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 305
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 306 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 365
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L +QK
Sbjct: 366 RFGRKGVAINFVTLDDQRMLFDIQK 390
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 27/160 (16%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
+SF +GL L+ GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLR-----GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 93
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ L +AL++AP+RE+ QI EK++ + D + V
Sbjct: 94 QQL----------------DYALLQCQALVLAPTRELAQQI----EKVMRALGDYQGVKV 133
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + + +VVGTP R+ ++ + LR
Sbjct: 134 HACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 173
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Query: 369 ALKHYYC-VVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 251 GIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 488 RLGRNGTVLT-ICKDPE 503
R GR G + + +D E
Sbjct: 371 RFGRKGVAINFVTRDDE 387
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 53 GSTSESLKNKGKPFGSNEREPVRVIEKQQQIEPA-PFAAKSFSELGLPNVLVERLKNEGF 111
GS E + + F E V+E Q + + +SF +GL L+ + GF
Sbjct: 3 GSAPEGTQFDARQFDQKLNE---VLEGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYGF 59
Query: 112 AVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPA 171
P+ +Q + K DVI ++ G+GKT + +L +
Sbjct: 60 EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQL----------------DF 103
Query: 172 KKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQQLVGGGNRSRQEEALRKNKPA 229
+ +AL++AP+RE+ QI EK++ + D V GG R+++ + +
Sbjct: 104 SLIQCQALVLAPTRELAQQI----EKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVH 159
Query: 230 IVVGTPSRIAELSAARKLR 248
+VVGTP R+ ++ + LR
Sbjct: 160 VVVGTPGRVFDMLKRQSLR 178
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 369 ALKHYYCVVRLQH-KVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K +Y V + K++TL L + F+N +++ + K+ +R + HG
Sbjct: 251 GIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D+ + R I+++F++G RVL+TT+L ARG+DV + LV+N +LPT +Y HR GR G
Sbjct: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSG 370
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQK 512
R GR G + + +L +QK
Sbjct: 371 RFGRKGVAINFVTLDDQRMLFDIQK 395
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
+SF +GL L+ + GF P+ +Q + K DVI ++ G+GKT + +L
Sbjct: 39 ESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVL 98
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGS--DNKRVVQ 208
+ L +AL++AP+RE+ QI EK++ + D + V
Sbjct: 99 QQL----------------DYALLQCQALVLAPTRELAQQI----EKVMRALGDYQGVKV 138
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG R+++ + + +VVGTP R+ ++ + LR
Sbjct: 139 HACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 178
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 88 FAAKSFSELGLPNVLVERLKNE-GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
FA+ SFS LGL L ++LK GF PT VQ A+P IL DV++ + G+GKT+AYL
Sbjct: 26 FASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYL 85
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
P+ I L+ P+ D + G AL++ P+RE+ +Q+ LEK+L + V
Sbjct: 86 APL---IHHLQGHSPKVD-------RSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIV 135
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
++GG +++++ LRK +I++ TP R+ +
Sbjct: 136 PGYVMGGEKKAKEKARLRKG-ISILIATPGRLLD 168
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%)
Query: 421 KAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYA 480
K LHG + + R + FK VL++T+++ARGLD K ++ + P ++ Y
Sbjct: 375 KTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYV 434
Query: 481 HRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQ 513
HR GR R+G G L + E+ LK+L+K
Sbjct: 435 HRVGRTARIGEKGEALLFLQPIEIDYLKELKKH 467
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%)
Query: 402 MNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDV 461
TK+ D + A+ K LHGD+ + R L F++G+ +LV T+++ARGLDV
Sbjct: 367 FTQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDV 426
Query: 462 AKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
DLV++ ELP ++ + HR GR GR G+ G+ + I + +K ++K++G
Sbjct: 427 PNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVG 480
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
+ ++LG+ +V+ LK G +Q A + ++ D+I ++ G+GKTLA+ +PI+
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
I KF G G P + L++AP+RE+ Q+ E + S + L
Sbjct: 177 KI----IKFNAKHGRGKNP------QCLVLAPTRELARQVEKEFRESAPSLDTIC---LY 223
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG +Q L + VGTP RI +L
Sbjct: 224 GGTPIGQQMRELNYGID-VAVGTPGRIIDL 252
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%)
Query: 402 MNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDV 461
TK+ D + AR K LHGD+ + R L F++G +LV T+++ARGLDV
Sbjct: 355 FTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAARGLDV 414
Query: 462 AKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
DL+++ ELP ++ + HR GR GR G+ G+ + I + +K +++++G
Sbjct: 415 PNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIEREVG 468
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
++F ELGL ++ L+ VPTE+QC +P +++ V++ S GSGKTLAYLLPI+
Sbjct: 112 ENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGSHTGSGKTLAYLLPIV 171
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
+ + + + G+ K +++ P+RE+ Q+ + I S + R L
Sbjct: 172 QLMR-------EDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSI--SHHARFRSIL 222
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRI 238
V GG+R R +E N +VVGTP RI
Sbjct: 223 VSGGSRIRPQEDSLNNAIDMVVGTPGRI 250
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKN--GDVRVLVTTELS 455
V+ F N + V L + HG++ R LKKFK+ GD LV T+L+
Sbjct: 373 VMVFCNTLNSSRAVDHYLSENQISTVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLA 432
Query: 456 ARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
ARGLD+ D VV + P +SI Y HR GR R+G G V ++ + + ++++ +
Sbjct: 433 ARGLDL-DVDHVVMFDFPKNSIDYLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAM 490
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 82/160 (51%), Gaps = 22/160 (13%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P + + +P ++ R++ GF PT++Q A+PT+ D I+ + GSGKTL YL
Sbjct: 72 PLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYL 131
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKR- 205
L I S I P R+ ++A+IV P+RE+GMQ V ++ ++L + ++
Sbjct: 132 LLIFSLINPQRS----------------SVQAVIVVPTRELGMQ-VTKVARMLAAKSEID 174
Query: 206 ----VVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V L+ GG R + L+ PAI+V T + + +
Sbjct: 175 VKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVASLCHM 214
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
L GD+ +R+ L + + G +LV+T+++ARG+D+ + + N +LP Y HRAG
Sbjct: 371 LEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAG 430
Query: 485 RIGR---LGRNGTVLTICKDPEVFVLKKLQKQL 514
R GR R V + E FVL++ + +L
Sbjct: 431 RAGRKPFSDRKCIVANLITSEERFVLQRYENEL 463
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ YY V + KV L L I F N +++ + K+ G +H
Sbjct: 335 GVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 394
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + +F+NG R LV T+L RG+D+ ++V+N + P S Y HR GR GR
Sbjct: 395 MVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGR 454
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGI---PIP 519
G G + + + F + + +++LG PIP
Sbjct: 455 FGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIP 488
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L++ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+
Sbjct: 123 GNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPV 182
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGM---QIVMELEKILGSDNKRV 206
L I P N I+A+I+ P+RE+ + Q+ EL K L
Sbjct: 183 LEKIDPNNNV----------------IQAMILVPTRELALQTSQVCKELSKYLN------ 220
Query: 207 VQQLVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+Q +V G S +++ +R ++P ++VGTP RI +L+
Sbjct: 221 IQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLT 257
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ YY V + KV L L I F N +++ + K+ G +H
Sbjct: 335 GVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 394
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + +F+NG R LV T+L RG+D+ ++V+N + P S Y HR GR GR
Sbjct: 395 MVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGR 454
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGI---PIP 519
G G + + + F + + +++LG PIP
Sbjct: 455 FGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIP 488
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 26/157 (16%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L++ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+
Sbjct: 123 GNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPV 182
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGM---QIVMELEKILGSDNKRV 206
L I P N I+A+I+ P+RE+ + Q+ EL K L
Sbjct: 183 LEKIDPNNNV----------------IQAMILVPTRELALQTSQVCKELSKYLN------ 220
Query: 207 VQQLVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+Q +V G S +++ +R ++P ++VGTP RI +L+
Sbjct: 221 IQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRILDLT 257
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 369 ALKHYYCVV-RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
+K YY V + + K DTL L I F N +++ + K+ + + +HG
Sbjct: 234 GIKQYYVDVDKEEWKFDTLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHG 293
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D + R I+ +F++ RVL+ +++ ARG+DV V+N ++P + Y HR GR G
Sbjct: 294 DKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAG 353
Query: 488 RLGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
R GR G + K ++ LK +++ G I
Sbjct: 354 RFGREGVAINFVKSSDMKDLKDIERHYGTKI 384
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 76 VIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKS 135
V E + I+P KSF ++G+ + ++ + + G+ P+E+Q A+ ILK DVI ++
Sbjct: 11 VFETTKGIKPI----KSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQA 66
Query: 136 WKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMEL 195
G+GKT + + + K ++ L+++PSRE+ Q +
Sbjct: 67 QSGTGKTSMIAISVCQIVNISSRK----------------VQVLVLSPSRELASQTEKTI 110
Query: 196 EKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRT 249
+ I G+ +GG + + L + A V GTP R+ ++ L+T
Sbjct: 111 QAI-GAHTNIQAHACIGGKSIGEDIKKLERGVHA-VSGTPGRVYDMIKRGSLQT 162
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 3/154 (1%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ YY V + KV L L I F N +++ + K+ G +H
Sbjct: 365 GVTQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 424
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + F+NG R LV T+L RG+D+ ++V+N + P S Y HR GR GR
Sbjct: 425 MVQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGR 484
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGI---PIP 519
G G + + + F + + +++LG PIP
Sbjct: 485 FGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIP 518
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 26/154 (16%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P L
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGM---QIVMELEKILGSDNKRVVQQ 209
I P N I+A+I+ P+RE+ + Q+ EL K L ++
Sbjct: 216 IDPENNV----------------IQAVILVPTRELALQTSQVCKELSKYLK------IEV 253
Query: 210 LVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+V G S +++ +R +P ++VGTP RI +L+
Sbjct: 254 MVTTGGTSLRDDIMRLYQPVHLLVGTPGRILDLA 287
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 389 CIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRV 448
+YA K ++ TK+ D V + + LHGD+ + R L F+ G V
Sbjct: 346 TVYAKGGKTIV--FTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTV 403
Query: 449 LVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLK 508
LV T++++RGLD+ DLV++ ELP D + HR+GR GR G+ G+ + + + ++
Sbjct: 404 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVR 463
Query: 509 KLQKQLG 515
L++ +G
Sbjct: 464 SLERDVG 470
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
+ S+L LP L E L+ G +Q A + L+ D+I ++ G+GKTLA+ +PI+
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ + G P + L++AP+RE+ Q+ E+++ S +
Sbjct: 163 RLTEEAGDYTAFRRSGRLP------KFLVLAPTRELAKQVEKEIKE---SAPYLSTVCVY 213
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG + + Q+ AL + +VVGTP RI +L R L+
Sbjct: 214 GGVSYTIQQSALTRGVD-VVVGTPGRIIDLIEGRSLK 249
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Query: 389 CIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRV 448
+YA K ++ TK+ D V + + LHGD+ + R L F+ G V
Sbjct: 346 TVYAKGGKTIV--FTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTV 403
Query: 449 LVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLK 508
LV T++++RGLD+ DLV++ ELP D + HR+GR GR G+ G+ + + + ++
Sbjct: 404 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVR 463
Query: 509 KLQKQLG 515
L++ +G
Sbjct: 464 SLERDVG 470
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
+ S+L LP L E L+ G +Q A + L+ D+I ++ G+GKTLA+ +PI+
Sbjct: 103 AISKLSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIK 162
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ + G P + L++AP+RE+ Q+ E+++ S +
Sbjct: 163 RLTEEAGDYTAFRRSGRLP------KFLVLAPTRELAKQVEKEIKE---SAPYLSTVCVY 213
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLR 248
GG + + Q+ AL + +VVGTP RI +L R L+
Sbjct: 214 GGVSYTIQQSALTRGVD-VVVGTPGRIIDLIEGRSLK 249
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ +Y V + K+ L L I F N +++ + K+ G +H
Sbjct: 342 GITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 401
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + F+NG R LV T+L RG+D+ ++V+N + P ++ Y HR GR GR
Sbjct: 402 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 461
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
G G + + + F L +++++LG I
Sbjct: 462 FGHLGLAVNLITYEDRFNLYRIEQELGTEI 491
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+
Sbjct: 130 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPV 189
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I D D I+A+I+ P+RE+ +Q ++ K LG K +Q
Sbjct: 190 LEKI----------DQDNNV------IQAVIIVPTRELALQ-TSQVCKELGKHLK--IQV 230
Query: 210 LVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+V G S +++ +R +P ++VGTP RI +L+
Sbjct: 231 MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLT 264
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
+ +Y V + K+ L L I F N +++ + K+ G +H
Sbjct: 342 GITQFYAFVEERQKIHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAK 401
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ + F+NG R LV T+L RG+D+ ++V+N + P ++ Y HR GR GR
Sbjct: 402 MLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGR 461
Query: 489 LGRNGTVLTICKDPEVFVLKKLQKQLGIPI 518
G G + + + F L +++++LG I
Sbjct: 462 FGHLGLAVNLITYEDRFNLYRIEQELGTEI 491
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
F + L L+ + +GF P+ +Q ++P L D++ ++ G+GKT A+ +P+
Sbjct: 130 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPV 189
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I D D I+A+I+ P+RE+ +Q ++ K LG K +Q
Sbjct: 190 LEKI----------DQDNNV------IQAVIIVPTRELALQ-TSQVCKELGKHLK--IQV 230
Query: 210 LVGGGNRSRQEEALRKNKPA-IVVGTPSRIAELS 242
+V G S +++ +R +P ++VGTP RI +L+
Sbjct: 231 MVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLT 264
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 4/154 (2%)
Query: 364 ESLPPALKHYYCVVRLQHKVDTLRRCI--YALHAKYVIAFMNHTKQLKDVVCKLEARGMK 421
E L +K Y K L I YA K ++ TK+ D V + +
Sbjct: 226 EKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIV--FTQTKRDADEVSLALSNSIA 283
Query: 422 AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
LHGD+ + R L F+ G VLV T++++RGLD+ DLV++ ELP D + H
Sbjct: 284 TEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVH 343
Query: 482 RAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
R+GR GR G+ G+ + + + ++ L++ +G
Sbjct: 344 RSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVG 377
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 100 NVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNK 159
NVL L+N V+ VP L+ D+I ++ G+GKTLA+ +PI+ +
Sbjct: 27 NVLKSLLRN--------VRAVLVPA-LQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGD 77
Query: 160 FPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQ 219
+ G P + L++AP+RE+ Q+ E+++ S + GG + + Q
Sbjct: 78 YTAFRRSGRLP------KFLVLAPTRELAKQVEKEIKE---SAPYLSTVCVYGGVSYTIQ 128
Query: 220 EEALRKNKPAIVVGTPSRIAELSAARKLR 248
+ AL + +VVGTP RI +L R L+
Sbjct: 129 QSALTRGVD-VVVGTPGRIIDLIEGRSLK 156
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 63/111 (56%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G+KAAELHG+L + R L+ F+ +V L+ T+++ARGLD+ V+N P +
Sbjct: 436 GLKAAELHGNLTQAQRLDSLELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPREIDS 495
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKLV 529
Y HR GR R GR G +T D + +LK + K++G + I E+ +V
Sbjct: 496 YVHRVGRTARAGREGYAVTFVTDSDRSLLKVIAKKVGSKLKSRVIPEQSIV 546
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 83 IEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKT 142
++ F A +F EL L L+ + G+ PT +Q A +P L D+ + GSGKT
Sbjct: 159 VDGVSFHADTFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKT 218
Query: 143 LAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSD 202
A+ LP L R F P + LI+ P+RE+ +QI ++ +
Sbjct: 219 AAFALPTLE-----RLLF--------RPKRVFATRVLILTPTRELAVQIHSMIQNLAQFT 265
Query: 203 NKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
+ + L+ GG R++E + ++ P IVV TP R+
Sbjct: 266 D--IKCGLIVGGLSVREQEVVLRSMPDIVVATPGRM 299
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 76 VIEKQQQI----EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDV 131
+I KQ I E P K+F ++ P+ L+ LK++G PT +Q +P +L D+
Sbjct: 78 LIRKQWHITVNGEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDM 137
Query: 132 IIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQI 191
I ++ GSGKTL ++LP++ P G+G P AL++ PSRE+ Q
Sbjct: 138 IGIAFTGSGKTLVFVLPMIILALQEEIMMPIAAGEG--PI------ALVICPSRELAKQT 189
Query: 192 VMELEKILGS----DNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
+E+ + S R+ L GG R + + K IVV TP R+ ++ A +K+
Sbjct: 190 YDVVEQFVASLVEDGYPRLRSLLCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKM 249
Query: 248 RTLGCRFXXXXXXXXXXXXXXRKDMHRMLEH 278
CR D+ + +H
Sbjct: 250 SLDACRLLTLDEADRLVDLGFEDDIRHVFDH 280
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F + + D+ L +G++A +HG + R + FK G VLV T+++++
Sbjct: 351 VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDYAISLFKAGKKDVLVATDVASK 410
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
GLD V+N ++P + +Y HR GR GR G+ G T
Sbjct: 411 GLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIATTF 451
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 77/150 (51%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDL 429
LK Y V ++K L + + + F + + L + G +A + G +
Sbjct: 235 LKQQYRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQM 294
Query: 430 GELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRL 489
+ R L KFK G+ +LV T++++RGLD+ D+V+N ++PT+S Y HR GR R
Sbjct: 295 TQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARA 354
Query: 490 GRNGTVLTICKDPEVFVLKKLQKQLGIPIP 519
GR+G +++ E+ +++K +G +P
Sbjct: 355 GRSGVGISLVNQYELEWYIQIEKLIGKKLP 384
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
K+F+ELG+ LV+ + G+ P+++Q A+P L+ DVI + GSGKT A+ +PIL
Sbjct: 9 KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
A+ G +PA A +++P+RE+ +QI + E LG+D L
Sbjct: 69 QALLEYVYDSEPKKGRRPDPA----FFACVLSPTRELAIQIAEQFEA-LGADISLRCAVL 123
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRI 238
VGG +R +Q AL K +P ++V TP R+
Sbjct: 124 VGGIDRMQQTIALGK-RPHVIVATPGRL 150
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 89 AAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLP 148
A KSF ELGL + L+ L +G PT +Q +A+P IL+ DV+ ++ GSGKTLAYLLP
Sbjct: 44 APKSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLP 103
Query: 149 ILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV-V 207
+L K D KKL A I+ PSRE+ Q+ E+ ++ ++
Sbjct: 104 LL-------QKLFSADSVS---KKKLAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKA 153
Query: 208 QQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAA 244
QL + S AL P I+V TP+ I + AA
Sbjct: 154 VQLTSSMSASDMRNAL-AGLPEILVSTPACIPKCFAA 189
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
VI F + TK++ D + + R AA +HGD + R +L +F++G VLV T+++AR
Sbjct: 406 VIIFCS-TKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKD 501
GLDV VVN + P Y HR GR GR G G T D
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGD 508
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF G P L+ + + GF+ PT +Q + P ++ D++ + GSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ +RN ++G L+++P+RE+ QI E K G ++ L
Sbjct: 219 HLQRIRND------------SRMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG + Q L + IVV TP R+ ++ R++
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRI 300
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
VI F + TK++ D + + R AA +HGD + R +L +F++G VLV T+++AR
Sbjct: 406 VIIFCS-TKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKD 501
GLDV VVN + P Y HR GR GR G G T D
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGD 508
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF G P L+ + + GF+ PT +Q + P ++ D++ + GSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ +RN ++G L+++P+RE+ QI E K G ++ L
Sbjct: 219 HLQRIRND------------SRMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG + Q L + IVV TP R+ ++ R++
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRI 300
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
VI F + TK++ D + + R AA +HGD + R +L +F++G VLV T+++AR
Sbjct: 406 VIIFCS-TKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKD 501
GLDV VVN + P Y HR GR GR G G T D
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGD 508
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF G P L+ + + GF+ PT +Q + P ++ D++ + GSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ +RN ++G L+++P+RE+ QI E K G ++ L
Sbjct: 219 HLQRIRND------------SRMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG + Q L + IVV TP R+ ++ R++
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRI 300
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
VI F + TK++ D + + R AA +HGD + R +L +F++G VLV T+++AR
Sbjct: 406 VIIFCS-TKRMCDQLTRNLTRQFGAAAIHGDKSQPERDNVLNQFRSGRTPVLVATDVAAR 464
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKD 501
GLDV VVN + P Y HR GR GR G G T D
Sbjct: 465 GLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGD 508
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF G P L+ + + GF+ PT +Q + P ++ D++ + GSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ +RN ++G L+++P+RE+ QI E K G ++ L
Sbjct: 219 HLQRIRND------------SRMGPTILVLSPTRELATQIQEEAVK-FGRSSRISCTCLY 265
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG + Q L + IVV TP R+ ++ R++
Sbjct: 266 GGAPKGPQLRDLERGA-DIVVATPGRLNDILEMRRI 300
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P KSF ++G P+ ++E +K GF PT +Q P +K D+I + GSGKTL+YL
Sbjct: 95 PKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYL 154
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP + + + GDG P L++AP+RE+ +QI E K GS +K
Sbjct: 155 LPAIVHVN-AQPMLAHGDG----PI------VLVLAPTRELAVQIQQEASK-FGSSSKIK 202
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+ GG + Q L+K IV+ TP R+ ++
Sbjct: 203 TTCIYGGVPKGPQVRDLQKGV-EIVIATPGRLIDM 236
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 63/131 (48%), Gaps = 1/131 (0%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIY-ALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHG 427
A++ V+ K + L + + + ++ F++ K + +L G A +HG
Sbjct: 317 AIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHG 376
Query: 428 DLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIG 487
D + R +L +F++G ++ T+++ARGLDV V+N + P Y HR GR G
Sbjct: 377 DKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTG 436
Query: 488 RLGRNGTVLTI 498
R G GT T
Sbjct: 437 RAGAKGTAYTF 447
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
+I F + TK++ D + + R AA +HGD + R +L +F++G VLV T+++AR
Sbjct: 409 IIIFCS-TKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAAR 467
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKD 501
GLDV +VVN + P Y HR GR GR G G T D
Sbjct: 468 GLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGD 511
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
SF GLPN L+ + + GF+ P+ +Q + P ++N D++ + GSGKTL YL+P
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ + N ++G L+++P+RE+ QI +E K G +K L
Sbjct: 222 HLQRIHND------------SRMGPTILVLSPTRELATQIQVEALK-FGKSSKISCACLY 268
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
GG + Q + + + IVV TP R+ ++
Sbjct: 269 GGAPKGPQLKEIERGV-DIVVATPGRLNDI 297
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
+I F + TK++ D + + R AA +HGD + R +L +F++G VLV T+++AR
Sbjct: 477 IIIFCS-TKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAAR 535
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKD 501
GLDV +VVN + P Y HR GR GR G G T D
Sbjct: 536 GLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGD 579
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 110 GFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGE 169
GF+ P+ +Q + P ++N D++ + GSGKTL YL+P + + N
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHND---------- 297
Query: 170 PAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPA 229
++G L+++P+RE+ QI +E K G +K L GG + Q + + +
Sbjct: 298 --SRMGPTILVLSPTRELATQIQVEALK-FGKSSKISCACLYGGAPKGPQLKEIERGV-D 353
Query: 230 IVVGTPSRIAEL 241
IVV TP R+ ++
Sbjct: 354 IVVATPGRLNDI 365
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
A+ Y VV K L + + + + TK+L D + + R A +HGD
Sbjct: 653 AITQYVEVVPQMEKERRLEQILRSQERGSKVIIFCSTKRLCDHLARSVGRHFGAVVIHGD 712
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ R +L +F++G VL+ T+++ARGLD+ +V+N + PT Y HR GR GR
Sbjct: 713 KTQGERDWVLNQFRSGKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGR 772
Query: 489 LGRNGTVLTICKDPE-------VFVLKKLQKQLGIPIPCCDIAER 526
G G T + + + VL+ +Q +P DIA R
Sbjct: 773 AGATGVAFTFFTEQDWKYAPDLIKVLEGANQQ--VPPQVRDIAMR 815
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 73 PVRVIEKQQQIE------PAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTIL 126
PV + KQ ++ PAP+ +F GLP ++ L + GF PT +Q P L
Sbjct: 413 PVEIYRKQHEVTTTGENIPAPYI--TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIAL 470
Query: 127 KNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSRE 186
++ D++ + GSGKTL YL+P + RN + G LI+AP+RE
Sbjct: 471 QSRDIVAIAKTGSGKTLGYLIPAFILLRHCRND------------SRNGPTVLILAPTRE 518
Query: 187 IGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+ QI E + G ++ L GG + Q + L + IVV TP R+ ++
Sbjct: 519 LATQIQDEALR-FGRSSRISCTCLYGGAPKGPQLKELERGA-DIVVATPGRLNDI 571
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 377 VRLQHKVDTLRRCIYALHAK----------YVIAFMNHTKQLKDVVCKLEARGMKAAELH 426
V H D + LHA+ + F+ K + L G A +H
Sbjct: 377 VEFVHDSDKRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIH 436
Query: 427 GDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRI 486
GD + R L+ FK G +LV T+++ARGLD+ VVN +LP D Y HR GR
Sbjct: 437 GDRSQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRT 496
Query: 487 GRLGRNGTVLTICKDPEVFVLKKL 510
GR G +G D + K L
Sbjct: 497 GRAGNSGLATAFFNDNNTTMAKPL 520
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +F+E+ L L ++ + PT VQ A+P + D++ + GSGKT A+
Sbjct: 142 PPPVNTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFC 201
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIE--ALIVAPSREIGMQIVMELEKILGSDNK 204
PI+S I ++++ + P G+ A+I++P+RE+ QI E K
Sbjct: 202 FPIISGI--MKDQHIE------RPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGV 253
Query: 205 RVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+VV + GG Q+ + I+V TP R+ +L
Sbjct: 254 KVV--VAYGGTPVNQQIRELERGVDILVATPGRLNDL 288
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 7/158 (4%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTI-LKNHDVIIKSWKGSGKTLAYLLPIL 150
++S + L +L++ + F PT++Q A + DVI + GSGKTLA+ LPIL
Sbjct: 191 AWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPIL 250
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLG----IEALIVAPSREIGMQIVMELEKILGSDNKRV 206
+ R K + GE A+K + ALI+ P+RE+ +Q+ LE + + +V
Sbjct: 251 QRLLDEREKVGKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKV 310
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAA 244
V +VGG +QE L K KP IVV TP R+ EL +A
Sbjct: 311 VP-IVGGMFSEKQERRL-KEKPEIVVATPGRLWELMSA 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 366 LPPALKHYYCVVRLQHKVDTLRRCIYALHAK-YVIAFMNHTKQLKDVVCKLEARGMKAAE 424
L P ++ + + K D I ++H + I F L+ + L+ G+
Sbjct: 473 LAPKIEESFIKCEEKEK-DAYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDVCT 531
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
L ++ + AR + +F+ + +L+ T+L ARG+D+ +++ +LP + Y HR G
Sbjct: 532 LFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHRCG 591
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI 516
R R +G + + + E L K +
Sbjct: 592 RTARAFADGCSIALIEPNETSKFYTLCKSFSM 623
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 369 ALKHYYCVV-RLQHKVDTLRRCIYAL-HAKYVIAFMNHTKQLKDVVCKLEARGMKAAELH 426
++K Y V + Q+K++ ++ I L I F+ + V L G +H
Sbjct: 312 SVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVH 371
Query: 427 GDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPT-------DSIHY 479
G+L E R I+K+FK +VL+ T++ ARG D + +LVVN LPT D Y
Sbjct: 372 GNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVY 431
Query: 480 AHRAGRIGRLGRNGTVLTICKDP--EVFVLKKLQKQL 514
HR GR GR GR G V + D + V++K++K
Sbjct: 432 LHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYF 468
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G A +HGD + R LK FK+G +LV T+++ARGLD+ VVN +LP D
Sbjct: 442 GFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDD 501
Query: 479 YAHRAGRIGRLGRNGTVLTICKD 501
Y HR GR GR G++G D
Sbjct: 502 YVHRIGRTGRAGKSGLATAFFND 524
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 10/169 (5%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +F+E+ L L ++ + PT VQ A+P +L+ D++ + GSGKT A+
Sbjct: 155 PPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFC 214
Query: 147 LPILSAIGPLRN-KFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKR 205
PI+S I ++ + P+G ++ + A+I++P+RE+ QI E +K +
Sbjct: 215 FPIISGIMKDQHVQRPRG-------SRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVK 267
Query: 206 VVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLGCRF 254
VV + GG Q+ + I+V TP R+ +L ++ RF
Sbjct: 268 VV--VAYGGTPINQQLRELERGVDILVATPGRLNDLLERARVSMQMIRF 314
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 98/223 (43%), Gaps = 19/223 (8%)
Query: 64 KPFGSNEREPVRVIEKQQQI----EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQC 119
+ S +R+ +R KQ I + P K+F ++ P +++ LK +G PT +Q
Sbjct: 118 RKMSSKQRDLIR---KQWHIIVNGDDIPPPIKNFKDMKFPRPVLDTLKEKGIVQPTPIQV 174
Query: 120 AAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEAL 179
+P IL D+I ++ GSGKTL ++LP++ P G+G P L
Sbjct: 175 QGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMIALQEEMMMPIAAGEG--PI------GL 226
Query: 180 IVAPSREIGMQIVMELEKILG----SDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTP 235
IV PSRE+ Q +E+ + + + L GG R + + K IVV TP
Sbjct: 227 IVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCIGGIDMRSQLEVVKRGVHIVVATP 286
Query: 236 SRIAELSAARKLRTLGCRFXXXXXXXXXXXXXXRKDMHRMLEH 278
R+ ++ A +K+ CR+ D+ + +H
Sbjct: 287 GRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREVFDH 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F + + D+ L +G++A +HG + R + FK G VLV T+++++
Sbjct: 400 VLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAISSFKAGKKDVLVATDVASK 459
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
GLD V+N ++P + +Y HR GR GR G+ G T
Sbjct: 460 GLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 58/91 (63%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+H + R + L KFK+G V +L+ T++++RGLD+ DLV+N ++P D Y HR G
Sbjct: 332 MHSLNSQSMRLSALSKFKSGKVPILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVG 391
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKKLQKQLG 515
R R GR G ++I + +V ++ K+++++G
Sbjct: 392 RTARAGRGGLAVSIITETDVKLIHKIEEEVG 422
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 74/153 (48%), Gaps = 18/153 (11%)
Query: 89 AAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLP 148
+A +F LGL VE K G PT VQ VP IL DV+ + GSGKT A+ LP
Sbjct: 56 SATNFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALP 115
Query: 149 ILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQ 208
IL + +P G+ AL+V P+RE+ Q+ + K LGS
Sbjct: 116 ILHRLAE-------------DP---YGVFALVVTPTRELAFQLAEQF-KALGSCLNLRCS 158
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+VGG + Q +L ++P IV+ TP RI L
Sbjct: 159 VIVGGMDMLTQTMSL-VSRPHIVITTPGRIKVL 190
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F + L + ++ +K+ GF T VQ A +P IL+ DV+ K+ G+GKT+A+LLP + A
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
+ K P D +P I L+V P+RE+ Q E +L VQ ++G
Sbjct: 444 V----IKSPPASRDSRQPP----IIVLVVCPTRELASQAAAEANTLLKYHPSIGVQVVIG 495
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRIA---ELSAARKLRTLGCRFXXXXXXXXXXXXXXR 269
G ++ ++ N I+V TP R+ E ++ R +G + R
Sbjct: 496 GTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFR 555
Query: 270 KDMHRMLEHV 279
+D+ R++ V
Sbjct: 556 RDIERIIAAV 565
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 405 TKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC 464
T+ + D++ +L + E+H + R+ + +F+ +LVT+++SARG+D
Sbjct: 653 TRLVADLLSQLS---LNVREIHSRKPQSYRTRVSDEFRKSKAIILVTSDVSARGVDYPDV 709
Query: 465 DLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI---PIPCC 521
LVV + LP+D Y HR GR GR G+ G + + E + + + K L I P+P
Sbjct: 710 SLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFMSSV-KDLPITKSPLPPI 768
Query: 522 D 522
D
Sbjct: 769 D 769
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F + + ++ +L K A LHGD + +R L+KFK+G VL+ T+++AR
Sbjct: 476 VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAAR 535
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLG-RNGTVLTICKDPEVFVLKKLQKQL-- 514
GLD+ VVN ++ D + HR GR GR G R+G T+ E +L L
Sbjct: 536 GLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVA 595
Query: 515 ---GIPIPCCDIA 524
+P D+A
Sbjct: 596 AGQNVPPELTDLA 608
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
K+F + G + ++ +K + + PT +QC A+P +L DVI + GSGKT A++LP++
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
I D E + G +I AP+RE+ QI +E +K + R V +
Sbjct: 288 VHI-----------MDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLR-VSAV 335
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKLRTLGCRF 254
GG ++ Q + L K IVV TP R+ ++ + L + +
Sbjct: 336 YGGMSKHEQFKEL-KAGCEIVVATPGRLIDMLKMKALTMMRASY 378
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 64/117 (54%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
V+ F+ ++ K++ +L+ ++A +H DL R + +F+ G+ VL+ T++ AR
Sbjct: 383 VLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAVDQFRAGEKWVLIATDVIAR 442
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQL 514
G+D + V+N + P + Y HR GR GR GR+G +T + +V L+ + +
Sbjct: 443 GMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTEQDVPFLRNIANTM 499
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 91 KSFSEL----GLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
KSF+EL G ++ L GF PT +Q A+P +L + + GSGKT A++
Sbjct: 137 KSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFI 196
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDN 203
P+L ++ K P D GI A+I++P+RE+ Q E +K++ N
Sbjct: 197 CPML-----IKLKRPSTD----------GIRAVILSPARELAAQTAREGKKLIKGSN 238
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 370 LKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGDL 429
+ + +++ K L++ + L K I F+N K + L+ G + LHG
Sbjct: 551 ISQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGK 610
Query: 430 GELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRL 489
+ R L+ F+ VLV T++ RG+D+ V+N ++P Y HR GR GR
Sbjct: 611 SQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRA 670
Query: 490 GRNG--TVLTICKDPEVFV-LKKLQKQLGIPIP 519
G++G T D EVF LK++ Q +P
Sbjct: 671 GKSGVATSFLTLHDTEVFYDLKQMLVQSNSAVP 703
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P +S+ E L + L++ ++ G+ P+ +Q AA+P L+ DVI + GSGKT A++
Sbjct: 309 PRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFV 368
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L+ I L P + + E G A+++AP+RE+ QI E K RV
Sbjct: 369 LPMLAYISRLP---PMSEENETE-----GPYAVVMAPTRELAQQIEEETVKFAHYLGFRV 420
Query: 207 VQQLVGGGNRSRQEEALRKNKP-AIVVGTPSRI 238
+VGG +S +E+ L+ + IV+ TP R+
Sbjct: 421 T-SIVGG--QSIEEQGLKITQGCEIVIATPGRL 450
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 378 RLQHKVDTLRR-CIYALHAKYVIAFMNHTKQLKDVV-----------CKL----EARGMK 421
RL K++ LR C + Y++A + + K ++ CKL +K
Sbjct: 305 RLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIK 364
Query: 422 AAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAH 481
A E G L + RS LK F+ GD++VLV ++ RG+DV V+N ++P + + H
Sbjct: 365 AKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIH 424
Query: 482 RAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLG------IPIP 519
RAGR R G+ G T+ + EV KL +++G PIP
Sbjct: 425 RAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIP 468
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 415 LEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPT 474
L+ RG KA +HG+ + R+ L FK G +LV T+++ARGLD+ ++V+N P
Sbjct: 386 LQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPL 445
Query: 475 DSIHYAHRAGRIGRLGRNGTVLTI 498
+ Y HR GR GR G+ G T
Sbjct: 446 TTEDYVHRIGRTGRAGKKGVAHTF 469
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 28/204 (13%)
Query: 60 KNKGKPFGSNEREPVRVIEKQQQIEPAPFAA-KSFSELGLPNVLVERLKNEGFAVPTEVQ 118
K + + G E E +V+ + +E A +AA K+F+E LP +++ K F P+ +Q
Sbjct: 84 KLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQ 141
Query: 119 CAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEA 178
P +L D+I + GSGKTLA+ +P + + K G +KK+
Sbjct: 142 SHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGG-------SKKVNPTC 194
Query: 179 LIVAPSREIGMQIVMELEKILGSDNKRVVQQ--------LVGGGNRSRQEEALRKNKPAI 230
L+++P+RE+ +QI SD R + + GG ++ Q A+R I
Sbjct: 195 LVLSPTRELAVQI---------SDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGVD-I 244
Query: 231 VVGTPSRIAELSAARKLRTLGCRF 254
V+GTP R+ +L + LR F
Sbjct: 245 VIGTPGRLRDLIESNVLRLSDVSF 268
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 408 LKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLV 467
L++ +C E A +HGD + R L+ FK G +LV T+++ARGLD+ V
Sbjct: 424 LENWLCMNE---FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 480
Query: 468 VNLELPTDSIHYAHRAGRIGRLGRNG 493
VN +LP D Y HR GR GR G++G
Sbjct: 481 VNFDLPNDIDDYVHRIGRTGRAGKSG 506
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 50 KPLGSTSE------SLKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLV 103
P G +E +N G F + E PV E P P +F+++ L + L
Sbjct: 109 NPFGDDAELEPVFTEQENTGINFDAYEDIPV---ETSGGDVPPP--VNTFADIDLGDALN 163
Query: 104 ERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRN-KFPQ 162
++ + PT VQ A+P +L D++ + GSGKT A+ PI+S I ++ + P+
Sbjct: 164 LNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPR 223
Query: 163 GDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEA 222
G ++ + A+I++P+RE+ QI E +K +VV + GG Q+
Sbjct: 224 G-------SRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVV--VAYGGTPIHQQLR 274
Query: 223 LRKNKPAIVVGTPSRIAELSAARKLRTLGCRF 254
+ I+V TP R+ +L ++ RF
Sbjct: 275 ELERGCDILVATPGRLNDLLERARVSMQMIRF 306
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 408 LKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLV 467
L++ +C E A +HGD + R L+ FK G +LV T+++ARGLD+ V
Sbjct: 424 LENWLCMNE---FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 480
Query: 468 VNLELPTDSIHYAHRAGRIGRLGRNG 493
VN +LP D Y HR GR GR G++G
Sbjct: 481 VNFDLPNDIDDYVHRIGRTGRAGKSG 506
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 50 KPLGSTSE------SLKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLV 103
P G +E +N G F + E PV E P P +F+++ L + L
Sbjct: 109 NPFGDDAELEPVFTEQENTGINFDAYEDIPV---ETSGGDVPPP--VNTFADIDLGDALN 163
Query: 104 ERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRN-KFPQ 162
++ + PT VQ A+P +L D++ + GSGKT A+ PI+S I ++ + P+
Sbjct: 164 LNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPR 223
Query: 163 GDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEA 222
G ++ + A+I++P+RE+ QI E +K +VV + GG Q+
Sbjct: 224 G-------SRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVV--VAYGGTPIHQQLR 274
Query: 223 LRKNKPAIVVGTPSRIAELSAARKLRTLGCRF 254
+ I+V TP R+ +L ++ RF
Sbjct: 275 ELERGCDILVATPGRLNDLLERARVSMQMIRF 306
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 408 LKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLV 467
L++ +C E A +HGD + R L+ FK G +LV T+++ARGLD+ V
Sbjct: 424 LENWLCMNE---FPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARGLDIPHVAHV 480
Query: 468 VNLELPTDSIHYAHRAGRIGRLGRNG 493
VN +LP D Y HR GR GR G++G
Sbjct: 481 VNFDLPNDIDDYVHRIGRTGRAGKSG 506
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 50 KPLGSTSE------SLKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLV 103
P G +E +N G F + E PV E P P +F+++ L + L
Sbjct: 109 NPFGDDAELEPVFTEQENTGINFDAYEDIPV---ETSGGDVPPP--VNTFADIDLGDALN 163
Query: 104 ERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRN-KFPQ 162
++ + PT VQ A+P +L D++ + GSGKT A+ PI+S I ++ + P+
Sbjct: 164 LNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPIISGIMKDQHVERPR 223
Query: 163 GDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEA 222
G ++ + A+I++P+RE+ QI E +K +VV + GG Q+
Sbjct: 224 G-------SRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVV--VAYGGTPIHQQLR 274
Query: 223 LRKNKPAIVVGTPSRIAELSAARKLRTLGCRF 254
+ I+V TP R+ +L ++ RF
Sbjct: 275 ELERGCDILVATPGRLNDLLERARVSMQMIRF 306
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 98/224 (43%), Gaps = 11/224 (4%)
Query: 59 LKNKGKPFGSNEREPVRVIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQ 118
LK K ++E V +K + + F L + ++ +K+ G+ T VQ
Sbjct: 288 LKKKAVSAFGFDKENVIEADKTRNANDSYLTKTRFDHYPLSPLSLKAIKDAGYETMTVVQ 347
Query: 119 CAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEA 178
A +P ILK DV+ K+ G+GKT+A+LLP + + K P D P I A
Sbjct: 348 EATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVV----KSPPTSPDNKRPP----ILA 399
Query: 179 LIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
L++ P+RE+ Q E +L VQ ++GG +++ ++ N I+V TP R+
Sbjct: 400 LVICPTRELANQAATEANTLLKYHPSIGVQVVIGGTRLGLEQKRMQTNPCQILVATPGRL 459
Query: 239 A---ELSAARKLRTLGCRFXXXXXXXXXXXXXXRKDMHRMLEHV 279
E + R G + RKD+ R++ V
Sbjct: 460 KDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAV 503
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 377 VRLQHKVDTLRR---CIYALHAKYVIAFMNH-----------TKQLKDVVCKLEARGMKA 422
VR H + +L R +Y L ++++ +++ TK + D++ +L +
Sbjct: 549 VRQMHMIASLDRHFSLLYTLLREHIMGNVDYKVIVFCTTAMVTKLVADLLGEL---NLNV 605
Query: 423 AELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHR 482
E+H + R+ + +F+ +LVT+++SARG+D LV+ + LP D Y HR
Sbjct: 606 REIHSRKPQSYRTRVSNEFRKSKGLILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHR 665
Query: 483 AGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI---PIPCCD 522
GR GR G+ G + + E + L L K L I P+P D
Sbjct: 666 LGRTGRKGKEGEGILLLAPWEEYFLSSL-KDLPITKSPLPSID 707
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 93 FSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSA 152
F + L + ++ +++ GF T VQ A +P IL+ D++ K+ G+GKT+A+LLP + A
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 153 IGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVG 212
+ K P D P I L+V P+RE+ Q E +L VQ ++G
Sbjct: 142 V----IKAPPASRDNRHPP----IIVLVVCPTRELACQAAAEANILLKYHPSIGVQVVIG 193
Query: 213 GGNRSRQEEALRKNKPAIVVGTPSRIAE 240
G ++ L+K+ I+V TP R+ +
Sbjct: 194 GTKLPTEQRRLQKSPCQILVATPGRLKD 221
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 405 TKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC 464
T+ + D++ KL + E+H + R+ + +F+ +LVT+++SARG+D
Sbjct: 351 TRLVADLLGKL---SLNVREIHSRKPQSYRTRVSDEFRKSKSIILVTSDVSARGVDYPDV 407
Query: 465 DLVVNLELPTDSIHYAHRAGRIGRLGRNGT-VLTICKDPEVFV 506
LVV + LP+D Y HR GR GR G+ G VL + E F+
Sbjct: 408 SLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEYFL 450
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 76 VIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKS 135
V+E++Q+ + ++AK F E + + ++ L G T VQ A + L D ++K+
Sbjct: 360 VMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKA 419
Query: 136 WKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLG-IEALIVAPSREIGMQIVME 194
G+GK++A+LLP + + N G+ K+ I LI+ P+RE+ QI E
Sbjct: 420 KTGTGKSMAFLLPAIETVLKAMN--------SGKGVHKVAPIFVLILCPTRELASQIAAE 471
Query: 195 LEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
+ +L + + VQ L+GG ++ L I++ TP R+ +
Sbjct: 472 GKALLKNHDGIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLD 517
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 57/103 (55%)
Query: 424 ELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRA 483
E+H +L R+ + +FK + +LVT+++SARG++ LV+ + +P+D Y HR
Sbjct: 663 EIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 722
Query: 484 GRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAER 526
GR GR G+ G L + E + L +L+ PIP D+ R
Sbjct: 723 GRTGREGKGGKGLLLIAPWERYFLDELKDLPLEPIPAPDLDSR 765
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 9/166 (5%)
Query: 76 VIEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKS 135
V+E++Q+ + ++AK F E + + ++ L G T VQ A + L D ++K+
Sbjct: 313 VMEEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKA 372
Query: 136 WKGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLG-IEALIVAPSREIGMQIVME 194
G+GK++A+LLP + + N G+ K+ I ALI+ P+RE+ QI E
Sbjct: 373 KTGTGKSMAFLLPAIETVLKAMN--------SGKGVNKVAPIFALILCPTRELASQIAAE 424
Query: 195 LEKILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
+ +L + VQ L+GG ++ L I++ TP R+ +
Sbjct: 425 GKALLKFHDGIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLD 470
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%)
Query: 424 ELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRA 483
E+H +L R+ + +FK + +LVT+++SARG++ LV+ + +P+D Y HR
Sbjct: 616 EIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIHRL 675
Query: 484 GRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDI 523
GR GR G+ G L + E + L +L+ PIP D+
Sbjct: 676 GRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIPAPDL 715
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 398 VIAFMNHTKQLKDVVCKLEARGMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSAR 457
++ F+ + V +L G A +HGD + R +L +FK+G ++ T+++AR
Sbjct: 413 ILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAAR 472
Query: 458 GLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLTI 498
GLDV VVN + P Y HR GR GR G G T
Sbjct: 473 GLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTF 513
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P K F + P+ ++E + GF PT +Q P LK D+I + GSGKTLAYL
Sbjct: 161 PKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 220
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP L + + + Q DG P LI+AP+RE+ +QI E K G +
Sbjct: 221 LPALVHVS-AQPRLGQDDG----PI------VLILAPTRELAVQIQEESRK-FGLRSGVR 268
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+ GG + Q LR+ IV+ TP R+ ++
Sbjct: 269 STCIYGGAPKGPQIRDLRRGV-EIVIATPGRLIDM 302
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
LHG + R + + FKN +L+ T ++ARGLDV + +LVVN + P Y HR G
Sbjct: 806 LHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 865
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI---PIP 519
R GR GR G +T + + L K L + P+P
Sbjct: 866 RTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVP 903
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P K + + GL + +++ +K + P +Q A+P I+ D I + GSGKTL ++
Sbjct: 525 PRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFV 584
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P L++AP+RE+ QI ++ K R
Sbjct: 585 LPMLRHI---KDQPPVEAGDG--PI------GLVMAPTRELVQQIHSDIRKFSKPLGIRC 633
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 634 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 666
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
LHG + R + + FKN +L+ T ++ARGLDV + +LVVN + P Y HR G
Sbjct: 468 LHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 527
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI---PIP 519
R GR GR G +T + + L K L + P+P
Sbjct: 528 RTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVP 565
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P K + + GL + +++ +K + P +Q A+P I+ D I + GSGKTL ++
Sbjct: 187 PRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFV 246
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG +G L++AP+RE+ QI ++ K R
Sbjct: 247 LPMLRHI---KDQPPVEAGDG-----PIG---LVMAPTRELVQQIHSDIRKFSKPLGIRC 295
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
V V GG+ Q+ + K IVV TP R+ ++
Sbjct: 296 VP--VYGGSGVAQQISELKRGTEIVVCTPGRMIDI 328
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+H + + R T K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR G
Sbjct: 377 IHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 436
Query: 485 RIGRLGRNGTVLTI---CKDPEVFVLKKLQKQLGIPI 518
R GR G G +T D E VL ++Q++ + I
Sbjct: 437 RAGRFGTKGLAITFVASASDSE--VLNQVQERFEVDI 471
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P P + + AL++ +RE+ QI E + V
Sbjct: 105 LQQIEP-------------SPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP R+ L+ + L
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDL 186
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 6/157 (3%)
Query: 365 SLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAE 424
+L ++HY + ++ K L + AL V+ F+ + ++ L +
Sbjct: 300 TLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSIC 358
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+H + + R T K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR G
Sbjct: 359 IHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 418
Query: 485 RIGRLGRNGTVLTI---CKDPEVFVLKKLQKQLGIPI 518
R GR G G +T D E VL ++Q++ + I
Sbjct: 419 RAGRFGTKGLAITFVASASDSE--VLNQVQERFEVDI 453
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P P + + AL++ +RE+ QI E + V
Sbjct: 105 LQQIEP-------------SPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP R+ L+ + L
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDL 186
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Query: 93 FSELGLP--NVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
FSEL P ++E L GF V T VQ +P + + DV++ + GSGKTLA+LLP +
Sbjct: 16 FSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFI 75
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
I N +P +P + +G+ I++P+RE+ QI E + + L
Sbjct: 76 EIIRR-SNSYPP------KPHQVMGV---IISPTRELSAQIHKVAEPFVSTLPNVNSVLL 125
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
VGG L + +++GTP R++++
Sbjct: 126 VGGREVEADMNTLEEEGANLLIGTPGRLSDM 156
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 426 HGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGR 485
HG + + R T L F VL+ T+++ARGLD+ D VV + P D + HR GR
Sbjct: 300 HGKMDQKGRDTALASFTEASSGVLLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGR 359
Query: 486 IGRLGRNGTVLTI 498
R+ R G +
Sbjct: 360 TARMERQGRAIVF 372
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+H + + R T K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR G
Sbjct: 318 IHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
Query: 485 RIGRLGRNGTVLTI---CKDPEVFVLKKLQKQLGIPI 518
R GR G G +T D E VL ++Q++ + I
Sbjct: 378 RAGRFGTKGLAITFVASASDSE--VLNQVQERFEVDI 412
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P P + + AL++ +RE+ QI E + V
Sbjct: 105 LQQIEP-------------SPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP R+ L+ + L
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDL 186
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+H + + R T K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR G
Sbjct: 318 IHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 377
Query: 485 RIGRLGRNGTVLTI---CKDPEVFVLKKLQKQLGIPI 518
R GR G G +T D E VL ++Q++ + I
Sbjct: 378 RAGRFGTKGLAITFVASASDSE--VLNQVQERFEVDI 412
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 90 AKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPI 149
+ F + L L+ + + GF P+EVQ +P + DVI ++ G GKT ++L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 150 LSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQ 209
L I P P + + AL++ +RE+ QI E + V
Sbjct: 105 LQQIEP-------------SPGQ---VSALVLCHTRELAYQICNEFVRFSTYLPDTKVSV 148
Query: 210 LVGGGNRSRQEEALRKNKPAIVVGTPSRIAELSAARKL 247
GG N ++ L+ P IVVGTP R+ L+ + L
Sbjct: 149 FYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDL 186
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+H + + R T K FK G R+LV T+L RG+D+ + ++V+N ++P + Y HR G
Sbjct: 235 IHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVG 294
Query: 485 RIGRLGRNGTVLTI---CKDPEVFVLKKLQKQLGIPI 518
R GR G G +T D E VL ++Q++ + I
Sbjct: 295 RAGRFGTKGLAITFVASASDSE--VLNQVQERFEVDI 329
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 91 KSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
K+F L L + + +K GFA T++Q A+P ++ DV+ + GSGKTLA+L+P +
Sbjct: 154 KTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAV 213
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQ---IVMELEKILGSDNKRVV 207
+ R KF +G G L++ P+RE+ +Q + EL K + + V
Sbjct: 214 ELL--YRVKFTPRNGTG----------VLVICPTRELAIQSYGVAKELLKY----HSQTV 257
Query: 208 QQLVGGGNRSRQEEALRKNKPAIVVGTPSRI 238
+++GG R + E L K ++V TP R+
Sbjct: 258 GKVIGGEKRKTEAEILAKG-VNLLVATPGRL 287
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 369 ALKHYYCVV----RLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAE 424
L+ YCVV RL + L+R K ++ F + K K E
Sbjct: 373 GLEQGYCVVPSAMRLLFLLTFLKRF---QGKKKIMVFFSTCKSTKFHAELFRYIKFDCLE 429
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+ G + + R+ +F + +L+ T ++ARGLD D +V + P + Y HR G
Sbjct: 430 IRGGIDQNKRTPTFLQFIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVG 489
Query: 485 RIGR-LGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKLV 529
R R G G L + E+ ++ L K IP+ + E+KL+
Sbjct: 490 RTARGEGAKGKALLVLTPQELKFIQYL-KAAKIPVEEHEFEEKKLL 534
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P K F + P+ ++E + GF PT +Q P LK D+I + GSGKTLAYL
Sbjct: 161 PKPMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYL 220
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP L + + + Q DG LI+AP+RE+ +QI E K G +
Sbjct: 221 LPALVHVS-AQPRLGQDDGP----------IVLILAPTRELAVQIQEESRK-FGLRSGVR 268
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+ GG + Q LR+ IV+ TP R+ ++
Sbjct: 269 STCIYGGAPKGPQIRDLRRGV-EIVIATPGRLIDM 302
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 77 IEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSW 136
I Q Q P +F+ GLP L+ L+ G+ PT +Q A+P L ++ +
Sbjct: 96 IHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASAD 155
Query: 137 KGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELE 196
GSGKT ++L+PI+S ++ P ++ A+++AP+RE+ +Q V +
Sbjct: 156 TGSGKTASFLVPIISRCTTYHSEHPSD--------QRRNPLAMVLAPTRELCVQ-VEDQA 206
Query: 197 KILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
K+LG +VGG S Q +++ +++GTP R+ +L
Sbjct: 207 KMLGKGLPFKTALVVGGDPMSGQLYRIQQGV-ELIIGTPGRVVDL 250
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G+KA +HG+ R ++ F G+V VLV+T + RG+D+ V+ ++P+
Sbjct: 382 GVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKE 441
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPE 503
Y H GR R+G GT + + +
Sbjct: 442 YIHVIGRASRMGEKGTAIVFVNEDD 466
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 10/165 (6%)
Query: 77 IEKQQQIEPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSW 136
I Q Q P +F+ GLP L+ L+ G+ PT +Q A+P L ++ +
Sbjct: 96 IHVQGQGSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASAD 155
Query: 137 KGSGKTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELE 196
GSGKT ++L+PI+S ++ P ++ A+++AP+RE+ +Q V +
Sbjct: 156 TGSGKTASFLVPIISRCTTYHSEHPSD--------QRRNPLAMVLAPTRELCVQ-VEDQA 206
Query: 197 KILGSDNKRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
K+LG +VGG S Q +++ +++GTP R+ +L
Sbjct: 207 KMLGKGLPFKTALVVGGDPMSGQLYRIQQGV-ELIIGTPGRVVDL 250
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G+KA +HG+ R ++ F G+V VLV+T + RG+D+ V+ ++P+
Sbjct: 382 GVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKE 441
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPE 503
Y H GR R+G GT + + +
Sbjct: 442 YIHVIGRASRMGEKGTAIVFVNEDD 466
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 396 KYVIAFMNHTKQLKDVVCKLEARGM-KAAELHGDLGELARSTILKKFKNGDVRVLVTTEL 454
K I F+N ++ +V LE G + LH + R L++FK VLVTT++
Sbjct: 464 KTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDV 523
Query: 455 SARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNG--TVLTICKDPEVF 505
RGLD+ V+N ++P Y HR GR GR G+ G T +D +VF
Sbjct: 524 LGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVF 576
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
LHG++ + R L F+NG LV T ++ARGLD+ L++ E P + Y HR+G
Sbjct: 376 LHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSG 435
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKKLQKQLGI 516
R GR G G +T+ D + +++K+ GI
Sbjct: 436 RTGRAGNTGVAVTLY-DSRKSSVSRIEKEAGI 466
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 12/141 (8%)
Query: 102 LVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILSAI--GPLRNK 159
L E+LK G +Q + +L D++ ++ G GKTLA++LPIL ++ GP ++K
Sbjct: 107 LREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILESLVNGPAKSK 166
Query: 160 FPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLVGGGNRSRQ 219
G G P+ L++ P+RE+ Q+ + + GS L GG + Q
Sbjct: 167 RKMGYGRS--PS------VLVLLPTRELAKQVAADFDAYGGSLGLSSC-CLYGGDSYPVQ 217
Query: 220 EEALRKNKPAIVVGTPSRIAE 240
E L++ IVVGTP RI +
Sbjct: 218 EGKLKRGVD-IVVGTPGRIKD 237
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
+HGD+ + AR L F L+ T+++ARGLD+ D VV + P D + HRAG
Sbjct: 308 IHGDMKQNARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAG 367
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKK 509
R RLGR G + VF+L K
Sbjct: 368 RTARLGRQGRAI-------VFLLPK 385
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 93 FSELGLP--NVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPIL 150
FS+L P ++E L F T VQ A +P + DV + + GSGKTLA+++P++
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 151 SAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQL 210
I FP +P + +G+ I++P+RE+ QI + + + L
Sbjct: 76 E-ILRRSTSFPP------KPHQVMGV---IISPTRELSTQIYNVAQPFVSTLANVNSVLL 125
Query: 211 VGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
VGG + + + +++GTP R++++
Sbjct: 126 VGGREVKADMKIIEEEGCNVLIGTPGRLSDI 156
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 363 VESLPPALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLK---DVVCKLEARG 419
V + P +L +V ++ K+D L I ++ F++ KQ+K + KL G
Sbjct: 284 VTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRP-G 342
Query: 420 MKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKC-DLVVNLELPTDSIH 478
+ LHG + + R + +F VL T++ ARGLD K D VV ++ P D
Sbjct: 343 IPLKSLHGKMSQEKRMGVYSQFIERQ-SVLFCTDVLARGLDFDKAVDWVVQVDCPEDVAS 401
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKL 528
Y HR GR R G L E +++KLQ + +PI +KL
Sbjct: 402 YIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQ-EAKVPIKLIKANNQKL 450
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 89 AAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLP 148
+ F++L + + LK+ + T+VQ AA+P L D++ + GSGKTLA+++P
Sbjct: 69 GVRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIP 128
Query: 149 ILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQ 208
IL + R ++ DG G +I++P+RE+ Q L K+ G +K
Sbjct: 129 ILEKLH--RERWSPEDGVG----------CIIISPTRELAAQTFGVLNKV-GKFHKFSAG 175
Query: 209 QLVGGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
L+ GG E R ++ I+V P R+ +
Sbjct: 176 LLI-GGREGVDVEKERVHEMNILVCAPGRLLQ 206
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 31/165 (18%)
Query: 83 IEPAPFAAKSFSELGLP--NVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSG 140
IE AP FSEL P ++E L GF V T VQ +P + + DV++ + GSG
Sbjct: 10 IEEAP---PRFSELKPPLSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSG 66
Query: 141 KTLAYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILG 200
KTLA+LLP + I N +P +P + +G+ I++P+RE+ QI
Sbjct: 67 KTLAFLLPFIEIIRR-SNSYPP------KPHQVMGV---IISPTRELSAQI--------- 107
Query: 201 SDNKRVVQQLVGGGNRSRQEEA----LRKNKPAIVVGTPSRIAEL 241
+V + + + R+ EA L + +++GTP R++++
Sbjct: 108 ---HKVARAVRLDFAKCREVEADMNTLEEEGANLLIGTPGRLSDM 149
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
+F L L +K GF T++Q ++ +L+ DV+ + GSGKTLA+L+P +
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 152 AIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVVQQLV 211
+ + +F +G G +++ P+RE+ +Q E++L ++ V +V
Sbjct: 150 LL--FKERFSPRNGTG----------VIVICPTRELAIQTKNVAEELLKHHSQTV--SMV 195
Query: 212 GGGNRSRQEEALRKNKPAIVVGTPSRIAE 240
GGN R E + +V+ TP R+ +
Sbjct: 196 IGGNNRRSEAQRIASGSNLVIATPGRLLD 224
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 369 ALKHYYCVVRLQHKVDTLRRCIYALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAELHGD 428
L+ YCVV + ++ L + K ++ F + K ++ ++ + +++HG
Sbjct: 308 GLEQGYCVVPSKQRLILLISFLKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGG 367
Query: 429 LGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGR 488
+ + R+ F +L+ T+++ARGLD+ D ++ + P Y HR GR R
Sbjct: 368 MDQNRRTKTFFDFMKAKKGILLCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTAR 427
Query: 489 -LGRNGTVLTICKDPEVFVLKKLQKQLGIPIPCCDIAERKL 528
G G L + E+ ++ L K +P+ + E++L
Sbjct: 428 GEGAKGKALLVLIPEELQFIRYL-KAAKVPVKELEFNEKRL 467
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 84 EPAPFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTL 143
E F+ K+F+E+G +++ LK + F P +Q A ++ II GSGKTL
Sbjct: 367 ETGFFSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTL 426
Query: 144 AYLLPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDN 203
AYL+P+ I LR + QG ++ +++ P+ E+ Q++ I S
Sbjct: 427 AYLVPV---IQRLREEELQGHSKSSPGCPRV----IVLVPTAELASQVLANCRSISKS-G 478
Query: 204 KRVVQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+V GG R R + + +++ TP R L
Sbjct: 479 VPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYL 516
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 438 LKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAGRIGRLGRNGTVLT 497
+ FK+ +L+ T ++ARGLDV + +LVVN + P Y HR GR GR GR G +T
Sbjct: 657 ISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVT 716
Query: 498 ICKDPEVFVLKKLQKQLGI---PIP 519
+ + L K L + P+P
Sbjct: 717 FISEDDAKYAPDLVKALELSEQPVP 741
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 13/155 (8%)
Query: 87 PFAAKSFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYL 146
P + + + GL + +++ LK + P +Q A+P I+ D I + GSGKTL ++
Sbjct: 392 PRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFV 451
Query: 147 LPILSAIGPLRNKFPQGDGDGGEPAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRV 206
LP+L I +++ P GDG P L++AP+RE+ QI ++ K S +
Sbjct: 452 LPMLRHI---KDQPPVEAGDG--PI------GLVMAPTRELVQQIYSDIRKF--SKALGI 498
Query: 207 VQQLVGGGNRSRQEEALRKNKPAIVVGTPSRIAEL 241
+ V GG+ Q+ + K IVV TP R+ ++
Sbjct: 499 ICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDI 533
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
L GD+ +R+ L + + G +LV+T+++ARG+D+ + + N +LP Y HRAG
Sbjct: 214 LEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAG 273
Query: 485 RIGR---LGRNGTVLTICKDPEVFVLKKLQKQL 514
R GR R V + E FVL++ + +L
Sbjct: 274 RAGRKPFSDRKCIVANLITSEERFVLQRYENEL 306
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 368 PALKHYYCVVRLQHKVDTLRRCI---YALHAKYVIAFMNHTKQLKDVVCKLEARGMKAAE 424
P LK + V + +VD L + + + + F N + ++ V LE ++
Sbjct: 394 PRLKQKWVEVTVDSQVDALIEAVKNNNNTNTERTMVFANTVEAVEAVADILEKASIQCYR 453
Query: 425 LHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIHYAHRAG 484
H + R+ IL F+ V V T+ +ARG+DV V+ + + ++ + HR G
Sbjct: 454 YHKNHKLDERANILADFRETG-GVFVCTDAAARGVDVPNVSHVIQADFASSAVDFLHRIG 512
Query: 485 RIGRLGRNGTVLTICKDPEVFVLKKLQK--QLGIPI 518
R R G+ GTV ++ + +++ +++ ++G P+
Sbjct: 513 RTARAGQYGTVTSLYTEANRDLVEAIREAVKMGQPV 548
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 18/168 (10%)
Query: 92 SFSELGLPNVLVERLKNEGFAVPTEVQCAAVPTILKNHDVIIKSWKGSGKTLAYLLPILS 151
S+ LGL + + L++ GF P+ Q +P+IL DVI+ + GSGKT YL PI
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPI-- 138
Query: 152 AIGPLRNKFPQGDGDGGE----PAKKLGIEALIVAPSREIGMQIVMELEKILGSDNKRVV 207
I L N + E P K + +LI+ P+ + Q+V + ++ D ++
Sbjct: 139 -IDQLTNTALDSEVTNREERPFPLKNI---SLILCPNVMLCEQVVRMVNGLVDEDGNPLL 194
Query: 208 QQLVGGGNRSRQEEALRKNKPAIVVGTPSRI---AELSAARKLRTLGC 252
+ G++ + P I+V TP+ + E R+L L C
Sbjct: 195 RVEAVCGSQGWPDRL-----PDIIVSTPAALLNNIEPKRNRRLEFLRC 237
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 419 GMKAAELHGDLGELARSTILKKFKNGDVRVLVTTELSARGLDVAKCDLVVNLELPTDSIH 478
G+KA +HG+ R ++ F G+V VLV+T + RG+D+ V+ ++P+
Sbjct: 245 GVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKE 304
Query: 479 YAHRAGRIGRLGRNGTVLTICKDPE 503
Y H GR R+G GT + + +
Sbjct: 305 YIHVIGRASRMGEKGTAIVFVNEDD 329