Miyakogusa Predicted Gene

Lj3g3v0935530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0935530.1 Non Chatacterized Hit- tr|K4D0D7|K4D0D7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.67,1e-18,FAMILY NOT NAMED,NULL; DUF936,Protein of unknown
function DUF936, plant; seg,NULL,CUFF.41650.1
         (335 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31920.1 | Symbols:  | Plant protein of unknown function (DUF...   197   8e-51
AT1G08760.1 | Symbols:  | Plant protein of unknown function (DUF...   125   4e-29
AT4G13370.1 | Symbols:  | Plant protein of unknown function (DUF...   111   7e-25
AT3G14170.1 | Symbols:  | Plant protein of unknown function (DUF...   110   1e-24
AT1G70340.1 | Symbols:  | Plant protein of unknown function (DUF...   106   2e-23
AT1G23790.1 | Symbols:  | Plant protein of unknown function (DUF...   105   3e-23
AT3G19610.1 | Symbols:  | Plant protein of unknown function (DUF...    96   3e-20

>AT2G31920.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr2:13574053-13576367 REVERSE LENGTH=585
          Length = 585

 Score =  197 bits (501), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 197/390 (50%), Gaps = 82/390 (21%)

Query: 1   MASLTPGVLSKLLQ-NAGNKVTGE-----HRQALLQVTEIVPRLSDDTWQPSTTGGGYFL 54
           MASLTPGVLS LL   AGN  +       HR  LLQV EIVP LSDD W+       +F+
Sbjct: 1   MASLTPGVLSNLLNIAAGNSPSSPPLLSSHRSPLLQVIEIVPCLSDDQWRSE----AFFV 56

Query: 55  KLSDSLHAAYVSVS-DHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLP 113
           K+SDSLHAAYV+VS   D+DLIRSD+++LGQF+Y+             P+P++RGL P+P
Sbjct: 57  KVSDSLHAAYVAVSTGDDADLIRSDEIQLGQFIYIC---GGLHVEKGCPVPVIRGLKPVP 113

Query: 114 KRRPCVGNPTDLVSS-LALPSTPKLHFRXXXXXXXXXXXXXXXXXXXXXXXXXXEEARRL 172
           KRR CVGNP+DL SS L LP T                                 E RRL
Sbjct: 114 KRRMCVGNPSDLYSSDLLLPFT------------------QVSVSPTTTKKKNLVETRRL 155

Query: 173 SLDSARR-VWDAS--ISRFK----FKSNP--TSPNVIDKKVSLKTDSPLK---------- 213
           SLDSARR  WD +  ++R +      S+P   S  V++ K  LK +SP K          
Sbjct: 156 SLDSARRSCWDQTPPVTRRRDAALLLSSPRLKSKLVLNDKSLLKIESPSKYFNCGTSPAL 215

Query: 214 ---------SPTSIVSPLK-------SKNENL--------------CPKSTSTPPRKSIA 243
                    SP S+ S  K       SK+ N                P S +  P+  I 
Sbjct: 216 RNKNVVKPGSPISMASSPKDGIKSPISKHLNCETPALRSRYVVKPASPISVTRSPKDGIK 275

Query: 244 KSPSAGTVPGQLVKVPLNFKTWCDKSSSWDNLPLPMCNLGKKVIAHRNVAFFAAVRSLEE 303
               A T P  L KVP +  TW D+  SW  LP  +  LGK+V +HR VA  AAV +LEE
Sbjct: 276 SLSKAVTPPVALFKVPSSHMTWSDQRMSWSGLPKTIQLLGKEVSSHRQVAVSAAVSALEE 335

Query: 304 ASATDTVVQCLGMFAEICHSCRTLSAGLLV 333
           ASA ++V+  L  FAE+C S + LS G +V
Sbjct: 336 ASAMESVLFSLQAFAELCDSTKKLSTGQVV 365


>AT1G08760.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:2805478-2808409 FORWARD LENGTH=748
          Length = 748

 Score =  125 bits (314), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 64/133 (48%), Positives = 90/133 (67%), Gaps = 11/133 (8%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSD 58
           MA+L PGVL KLLQ  N   K+ GEHR +LLQV  IVP L+     P+    G++LK+SD
Sbjct: 1   MANLVPGVLLKLLQHMNTDVKIAGEHRSSLLQVISIVPALAGGELFPNQ---GFYLKVSD 57

Query: 59  SLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPC 118
           S HA YVS+ D   DLI SDK++LGQ+++V  +        +SP+P++RG+ P+P R PC
Sbjct: 58  SSHATYVSLPDEHDDLILSDKIQLGQYIHVDRV------ESSSPVPILRGVRPVPGRHPC 111

Query: 119 VGNPTDLVSSLAL 131
           VG+P D+V++ +L
Sbjct: 112 VGDPEDIVATHSL 124



 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 70/111 (63%), Gaps = 8/111 (7%)

Query: 215 PTSIVSPLKSKNENLCPKSTSTPPRKSIAKSPSAGTVPGQLVKVPLNFKTWCDKSSSWDN 274
           PT++   L +K++   PKSTS   +KS+A++     +PG LVKV +N K     +  W +
Sbjct: 368 PTAV---LDTKDKTSRPKSTSVE-KKSVAEN----GLPGNLVKVSVNGKRLAAANIQWSS 419

Query: 275 LPLPMCNLGKKVIAHRNVAFFAAVRSLEEASATDTVVQCLGMFAEICHSCR 325
           LP  +  +G++V+ HR  A   A+ +L+EASA+++++QCL M++++  + +
Sbjct: 420 LPPSLSRMGQEVLRHREAAQVVAIEALQEASASESLLQCLIMYSDLLSTAK 470


>AT4G13370.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr4:7777916-7780334 REVERSE LENGTH=673
          Length = 673

 Score =  111 bits (277), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 58/132 (43%), Positives = 88/132 (66%), Gaps = 11/132 (8%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSD 58
           MASL PG+L KLLQ  N+G + TG+HR A+LQVT IVP L+     P+    G+++++SD
Sbjct: 1   MASLAPGILLKLLQCMNSGTRPTGDHRSAILQVTGIVPALAGSDLWPNQ---GFYVQISD 57

Query: 59  SLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPC 118
           SL++ YVS+S+ D+DLI S++L+LGQF+Y+  L        A+P+P   G+ P+  R   
Sbjct: 58  SLNSTYVSLSERDTDLILSNRLQLGQFIYLERL------EFATPVPRAAGIRPVAGRHAF 111

Query: 119 VGNPTDLVSSLA 130
           VG P  L++ ++
Sbjct: 112 VGKPEPLIARVS 123


>AT3G14170.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr3:4696115-4697989 REVERSE LENGTH=505
          Length = 505

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/131 (46%), Positives = 83/131 (63%), Gaps = 11/131 (8%)

Query: 1   MASLTPGVLSKLLQ--NAGNKVTGEHRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLSD 58
           MASLTP VL KLL+  N   KV GE+R  LLQV  IVP L+     P+    G+F+K+SD
Sbjct: 1   MASLTPRVLIKLLETMNTNIKVRGEYRSVLLQVISIVPALAGSELWPNQ---GFFIKVSD 57

Query: 59  SLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRPC 118
           S H+ YVS+S+ D++LI ++KL +GQF YV  L         +P+P++ G+ P+  R P 
Sbjct: 58  SSHSTYVSLSNEDNELILNNKLGIGQFFYVDKL------DAGTPVPVLVGVRPISGRHPF 111

Query: 119 VGNPTDLVSSL 129
           VGNP DL+  L
Sbjct: 112 VGNPKDLMQML 122


>AT1G70340.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:26504567-26506389 REVERSE LENGTH=510
          Length = 510

 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 56/129 (43%), Positives = 81/129 (62%), Gaps = 12/129 (9%)

Query: 1   MASLTPGVLSKLLQN--AGNKVTGEHRQALLQVTEIVP-RLSDDTWQPSTTGGGYFLKLS 57
           MA+L PG+L KL+Q    G K T EHR ++LQVT+IVP  L + + +P     G+ +K+S
Sbjct: 1   MAALAPGILQKLIQGMKTGIKPTREHRSSMLQVTDIVPIDLDEKSLEPKQ---GFLIKIS 57

Query: 58  DSLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRP 117
           DS H+ YVS+     D++ S+KL+LGQF+YV  L         SP+P+++G  P+P R P
Sbjct: 58  DSSHSIYVSLPSDQDDVVLSNKLQLGQFIYVDRL------EPGSPVPVIKGAKPIPGRHP 111

Query: 118 CVGNPTDLV 126
            +G P  LV
Sbjct: 112 LLGTPETLV 120


>AT1G23790.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:8410099-8411917 FORWARD LENGTH=518
          Length = 518

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 14/132 (10%)

Query: 1   MASLTPGVLSKLLQN--AGNKVTGEHRQALLQVTEIVP-RLSDDTWQPSTTGGGYFLKLS 57
           MA+L PG+L KL+     G K TGEHR +LLQVT+IVP  L +    P     G+F+K+S
Sbjct: 1   MAALAPGILQKLIDGMKTGVKPTGEHRSSLLQVTDIVPIDLDEKNLLPKQ---GFFIKVS 57

Query: 58  DSLHAAYVSV-SDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRR 116
           DS H+ YVS+ SD D D++ S+K++LGQF+YV  L         +P+P+++G  P+P R 
Sbjct: 58  DSSHSIYVSLPSDQDDDVL-SNKMQLGQFIYVDRL------DPGTPVPIIKGARPIPGRH 110

Query: 117 PCVGNPTDLVSS 128
           P +G P  L+S+
Sbjct: 111 PLLGTPEPLMST 122


>AT3G19610.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr3:6812493-6814660 REVERSE LENGTH=640
          Length = 640

 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/129 (40%), Positives = 78/129 (60%), Gaps = 12/129 (9%)

Query: 1   MASLTPGVLSKLLQNAG-NKVTGE--HRQALLQVTEIVPRLSDDTWQPSTTGGGYFLKLS 57
           MA L  GVL KLL+  G  KV  +  HR  LLQ+  I+P L+     P+    G+FL+++
Sbjct: 29  MAELRSGVLFKLLEEMGVGKVRRDVDHRPVLLQIRCIIPVLAAGGLWPNK---GFFLRIT 85

Query: 58  DSLHAAYVSVSDHDSDLIRSDKLRLGQFVYVTHLXXXXXXXXASPIPLVRGLNPLPKRRP 117
           DS H+ YVS+   ++DL+  DKL++GQ ++V  L        A P+P+++G+ P P RR 
Sbjct: 86  DSTHSIYVSLPREENDLVLYDKLQIGQLIFVEKL------EFAYPVPMIKGIRPTPGRRA 139

Query: 118 CVGNPTDLV 126
           C G+P DL+
Sbjct: 140 CTGDPIDLI 148



 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 39/58 (67%)

Query: 263 KTWCDKSSSWDNLPLPMCNLGKKVIAHRNVAFFAAVRSLEEASATDTVVQCLGMFAEI 320
           ++W +    WD+LP  + NLGK+++  R+ A  AA ++L EASA + +++CL  ++E+
Sbjct: 332 RSWTETEILWDSLPPKVVNLGKEILRQRDTAIRAASQALLEASAAERLLKCLRSYSEL 389