Miyakogusa Predicted Gene

Lj3g3v0931350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0931350.1 tr|Q41401|Q41401_SESRO Chitinase homologue
OS=Sesbania rostrata PE=2 SV=2,71.39,0,CHITINASE_18,Glycoside
hydrolase, chitinase active site; (Trans)glycosidases,Glycoside
hydrolase, su,CUFF.41647.1
         (334 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24090.1 | Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805...   265   5e-71

>AT5G24090.1 | Symbols: ATCHIA, CHIA | chitinase A |
           chr5:8143805-8145153 REVERSE LENGTH=302
          Length = 302

 Score =  265 bits (676), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 134/277 (48%), Positives = 179/277 (64%), Gaps = 7/277 (2%)

Query: 26  NAAKGGIAVYWGQNGGEGTLSTACDTGNYEIVLLAFLNQFGCGRTPSWNFAGHCGDWS-P 84
           +A++GGIA+YWGQNG EG LS  C TG Y  V +AFL +FG G+TP  N AGHC   +  
Sbjct: 26  DASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANT 85

Query: 85  CTKLQPDIENCQRKGVKVFLSIGGAIGPYSLCSEQDAHEVANYLYKNFLSGQYG--PLGS 142
           CT     +++CQ +G+KV LS+GG IG YS+ S +DA  +A+YL+ NFL G+    PLG 
Sbjct: 86  CTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGD 145

Query: 143 VTLDGIDFDIEGGTNLYWDALARHLDALRHKNKYFSLSAAPQCFMPDYYLDTAIKTGLFD 202
             LDGIDF+IE G+  +WD LAR L    H+ +   L+ APQC  PD  + +A+ T  FD
Sbjct: 146 AVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFD 205

Query: 203 YLFIQFYNNPPCQYDTSRGDATLLLQSWAHWTSYVHPNNTVYMGLPASTAAAPSGGYIPP 262
           Y++IQFYNNPPC Y  S G+   L  SW  WT+ +      ++GLPA+  AA S GYIPP
Sbjct: 206 YVWIQFYNNPPCSY--SSGNTQNLFDSWNKWTTSIAAQK-FFLGLPAAPEAAGS-GYIPP 261

Query: 263 QDLISKVLPYIKPTPNYGGIMLWDRFNDVQNNYSNQF 299
             L S++LP +K +  YGG+MLW +F D +N YS+  
Sbjct: 262 DVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298